Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0010961.1

Orthogroup ID

OG0004196

Physical Location & Seq

Genomic Coordinates Reverse (-)

33443 .. 38119

Gene Structure 4677 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0010961.1_g000011.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2508 bp

atgtgtctcattttatgcattctacatacgcaggttcgaggtgcccttgaaactcttgtaggtgcattgactcctattgaacatgcaaaagtcccaaagaatgagattcaacctgctctaatgaacactgatttgctttccagagaagcagacagcatttcacttctcttaagtttgttgtcagaggaggatttctatgtacgatattacactcttcaacttttgacagctcttctcacaaattctccaaataggttacaggaagccattctgaccatacctcgtggtataactcgcctaatggatatgcttatggatcgggaggttatacgaaatgaggccttattacttcttacttacttgacacgtgaagctgaggaaattcaaaaaattgtggtctttgaaggtgcttttgaaaagattttcagcatcatcaaagaggaaggtggctcagacggtggtgttgttgtccaggactgtattgaactgttaaacaaccttattcggaagaatgcatctaatcagatactattgagggagacaattggatttgacccattaatgtcaattttgaagttacgaggaagtgcttacagtttcactcaacaaaagacaattaatctactcagttcgttggaaactattaatttgctgataatgggaggttcagaggctgatcctggaaaagatgcaaataagctgacaaacaagacaactcttcttcagaaaaaaatcttggaccatcttctaatgctgggtgtagaaagccagtgggcacctgtagctgtccgttgtgcagcattacaatgcatcggtaatctaattatcggacattccaagaatcttgatgcccttgcaagcaaagttctcggagaggggccacaggaagctgctctgaactcaattctacgaatcatcttaaggacatctagtgtacaagaatttgttgcagctgattatgtttttaagagcttttgtgagaaaaatgctgatggccaaacaatgttagcatcaacattgattcctcaaccacattcaatgactcatgcaccccttgaggaagatgtgaacatgtcatttggaagcatgctgttacaaggtcttaccttgagtgagagtgaagtcgatcttgagacatgttgcagagctgccagtgttctagctcatgtcatgaaggacaatatccagtgcaaggaaaaggtgttgcatattgaccttgaggcacctacgccatctttaggcgcttctgagcctctaatgcatcgcgtggtaaaatacttggccctttcctcttccatgaaaagcaaagatggaaagtcaggtggaaatgcatatgttcaaccaatcctcttgaaaatgctggtgacctggctagctgattgccctagtgctgttcattgcttcctagattcacgtccccacatcacatatctgcttgaactggtatccagttcatccgctacagtgttcgtaaagggattggcggctgttcttctgggagagtgtgttatctacaataaatcaggtgaaagtgggaaagatgcttttactgtagttgattccataagccaaaaggttggactcacatcatactttctgaagtttgatgaaatgagaaaaaacttccttttcacctctgcaaggtctgctgagccccgtcaacaattaaccagatctgcttctgctggtatggtagagcctgaagatgttgatgggaacaatttatctgatcagaaagatgaggatctaccggttctctcctcaatctttgatgctgcatttgtaaaccttgttaagagtttagaggcaaacatcagagaaaaaatcgttgaggtttacagtaatccaaagagcaaggtggcagtggtgccagcagaattggaacaaaagagtggggaaagtgatggagagtatgttaagcggctgaaagaatttgtggaaaagcaatgctctgagatacaggacctcctcggccgcaatgcaagcttggctgaggacgtggcagcaactggtgggggaagtcattctcggtctgagcaaggcacaggctcagatagagttcatgtagagacgcttagacgagatcttcaagaagcatctaggcggttggagttgctcaaggtagagaaagccaagattgaatctgaggcatccatgtataaaaatttagctggcaagatggaatctgacctgaagagtctatcggatgcttacaacagtcttgagcaggccaatttccaactagaaaaggaggtaagaggtcaaaagggtgtggggtcttcagcctttgcagatgtggatgcaattagagctcaggcaagggaagaagctcagaaggagagcgaggcagaactgaatgatcttctcgtgtgccttggacaagaacagagcaaggtcgaaaagcttagtgccaggttgttggagttgggggaggacgtggacaagctgcttgaagatatcggagatgatatgggattgcctggagatggtgaagaggaggaagactga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005794 GO:0005795 GO:0005798 GO:0005829 GO:0006810 GO:0006886 GO:0006888 GO:0007275 GO:0008104 GO:0008150 GO:0008565 GO:0009791 GO:0009987 GO:0012505 GO:0012506 GO:0012507 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0016192 GO:0022406 GO:0030133 GO:0030134 GO:0030135 GO:0030658 GO:0030659 GO:0030660 GO:0030662 GO:0031090 GO:0031410 GO:0031982 GO:0031984 GO:0032501 GO:0032502 GO:0032527 GO:0033036 GO:0034613 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044433 GO:0044444 GO:0044446 GO:0044464 GO:0045056 GO:0045184 GO:0046907 GO:0048193 GO:0048211 GO:0048278 GO:0048856 GO:0051179 GO:0051234 GO:0051640 GO:0051641 GO:0051649 GO:0061024 GO:0061025 GO:0070727 GO:0071702 GO:0071705 GO:0071840 GO:0097708 GO:0098588 GO:0098791 GO:0098805 GO:0140056

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Uso1_p115_C Uso1_p115_head

Protein Analysis

835

Amino Acids

91.62

Weight (kDa)

4.93

Isoelectric Point (pI)

42.32

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004196)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G27530
fragaria_vesca	FvH4_1g06690 FvH4_1g06690 FvH4_6g51710 FvH4_6g51710 FvH4_6g51710 FvH4_6g51710
malus_domestica	MD09G1023300.v1.1 MD17G1022800.v1.1
prunus_persica	Prupe.3G293500_v2.0.a1 Prupe.3G293600_v2.0.a1
pyrus_communis	pycom111g01940
rosa_chinensis	RchiOBHm_Chr2g0173241 RchiOBHm_Chr2g0173251
rosa_laevigata	RLG00000022173 RLG00000022175
rosa_multiflora	Rmu_sc0010961.1_g000008 Rmu_sc0010961.1_g000011
rosa_roxburghii	Rroxscaffold_2G00079090
rosa_rugosa	Rorug02G0566800 Rorug02G0566900 Rorug02G0566900 Rorug02G0566900
rosa_samantha	Rh2AG646700 Rh2BG657400 Rh2CG622600 Rh2CG623100 Rh2CG623200 Rh2DG671000 Rh2DG671500 Rh2DG671600
rosa_wichuraiana	Rw2G053120 Rw2G053130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	22, 121
AccB1I	GGYRCC	4 cut(s)	41, 775, 1222, 1867
AccII	CGCG	1 cut(s)	1266
AciI	CCGC	5 cut(s)	1458, 1484, 1921, 1975, 2104
AclWI	GGATC	3 cut(s)	324, 671, 1752
AcoI	YGGCCR	2 cut(s)	994, 1972
AcsI	RAATTY	5 cut(s)	241, 381, 941, 1931, 2164
AcuI	CTGAAG	5 cut(s)	707, 1619, 1722, 2213, 2265
AcvI	CACGTG	1 cut(s)	368
AfaI	GTAC	2 cut(s)	201, 936
AfiI	CCNNNNNNNGG	4 cut(s)	1192, 1238, 1641, 2486
AflII	CTTAAG	2 cut(s)	169, 919
AflIII	ACRYGT	3 cut(s)	365, 1071, 1136
AgeI	ACCGGT	1 cut(s)	1750
AjiI	CACGTC	3 cut(s)	1415, 1999, 2437
AjnI	CCWGG	5 cut(s)	471, 679, 1367, 2411, 2479
AjuI	GAANNNNNNNTTGG	2 cut(s)	719, 751
Alw21I	GWGCWC	1 cut(s)	2314
Alw26I	GTCTC	4 cut(s)	11, 533, 1127, 2063
AlwI	GGATC	3 cut(s)	324, 671, 1752
AlwNI	CAGNNNCTG	2 cut(s)	674, 2009
AoxI	GGCC	6 cut(s)	339, 878, 994, 1281, 1972, 2229
ApeKI	GCWGC	7 cut(s)	797, 890, 950, 1148, 1775, 2003, 2446
ApoI	RAATTY	5 cut(s)	241, 381, 941, 1931, 2164
AseI	ATTAAT	3 cut(s)	560, 618, 645
AsiGI	ACCGGT	1 cut(s)	1750
Asp700I	GAANNNNTTC	2 cut(s)	267, 2023
AspLEI	GCGC	1 cut(s)	1244
AspS9I	GGNCC	4 cut(s)	739, 878, 1282, 1963
AsuHPI	GGTGA	4 cut(s)	1375, 1538, 1624, 2501
AsuNHI	GCTAGC	1 cut(s)	1372
AvaII	GGWCC	2 cut(s)	739, 1963
BaeGI	GKGCMC	2 cut(s)	46, 778
BalI	TGGCCA	1 cut(s)	996
BanI	GGYRCC	4 cut(s)	41, 775, 1222, 1867
BanII	GRGCYC	2 cut(s)	1656, 2314
BauI	CACGAG	2 cut(s)	282, 2366
BbrPI	CACGTG	1 cut(s)	368
BbsI	GAAGAC	1 cut(s)	2271
Bbv12I	GWGCWC	1 cut(s)	2314
BbvCI	CCTCAGC	2 cut(s)	375, 1992
BbvI	GCAGC	7 cut(s)	809, 877, 962, 1135, 1762, 2015, 2433
BccI	CCATC	8 cut(s)	750, 986, 1240, 1304, 1706, 1898, 2173, 2480
BcgI	CGANNNNNNTGC	2 cut(s)	850, 884
BciT130I	CCWGG	5 cut(s)	473, 681, 1369, 2413, 2481
BciVI	GTATCC	1 cut(s)	1456
BclI	TGATCA	1 cut(s)	1729
BcoDI	GTCTC	4 cut(s)	11, 533, 1127, 2063
BfaI	CTAG	7 cut(s)	930, 1160, 1373, 1386, 1406, 2100, 2243
BfmI	CTRYAG	3 cut(s)	780, 1461, 1551
BfoI	RGCGCY	1 cut(s)	1245
BfrI	CTTAAG	2 cut(s)	169, 919
BfuAI	ACCTGC	2 cut(s)	22, 121
BfuI	GTATCC	1 cut(s)	1456
BglII	AGATCT	2 cut(s)	1673, 2083
BlpI	GCTNAGC	1 cut(s)	1650
Bme1390I	CCNGG	5 cut(s)	473, 681, 1369, 2413, 2481
Bme18I	GGWCC	2 cut(s)	739, 1963
BmgBI	CACGTC	3 cut(s)	1415, 1999, 2437
BmgT120I	GGNCC	4 cut(s)	739, 878, 1282, 1963
BmiI	GGNNCC	5 cut(s)	43, 777, 879, 1224, 1869
BmrFI	CCNGG	5 cut(s)	473, 681, 1369, 2413, 2481
BmtI	GCTAGC	1 cut(s)	1376
BpiI	GAAGAC	1 cut(s)	2271
BpmI	CTGGAG	1 cut(s)	2502
Bpu10I	CCTNAGC	3 cut(s)	375, 1992, 2313
Bpu1102I	GCTNAGC	1 cut(s)	1650
BpuEI	CTTGAG	6 cut(s)	1076, 1129, 1151, 1238, 2102, 2243
BsaAI	YACGTR	1 cut(s)	368
BsaBI	GATNNNNATC	1 cut(s)	1743
BsaJI	CCNNGG	2 cut(s)	1969, 2374
BsaWI	WCCGGW	1 cut(s)	1750
BsaXI	ACNNNNNCTCC	8 cut(s)	229, 259, 1491, 1521, 1899, 1929, 1950, 1980
Bsc4I	CCNNNNNNNGG	4 cut(s)	1192, 1238, 1641, 2486
Bse118I	RCCGGY	1 cut(s)	1750
Bse1I	ACTGG	6 cut(s)	769, 1152, 1186, 1446, 1449, 2014
Bse3DI	GCAATG	3 cut(s)	1396, 1952, 1984
Bse8I	GATNNNNATC	1 cut(s)	1743
BseBI	CCWGG	5 cut(s)	473, 681, 1369, 2413, 2481
BseDI	CCNNGG	2 cut(s)	1969, 2374
BseGI	GGATG	4 cut(s)	1454, 2150, 2212, 2305
BseJI	GATNNNNATC	1 cut(s)	1743
BseLI	CCNNNNNNNGG	4 cut(s)	1192, 1238, 1641, 2486
BseMI	GCAATG	3 cut(s)	1396, 1952, 1984
BseNI	ACTGG	6 cut(s)	769, 1152, 1186, 1446, 1449, 2014
BseRI	GAGGAG	3 cut(s)	200, 1750, 1958
BseSI	GKGCMC	2 cut(s)	46, 778
BseX3I	CGGCCG	1 cut(s)	1972
BseXI	GCAGC	7 cut(s)	809, 877, 962, 1135, 1762, 2015, 2433
BseYI	CCCAGC	1 cut(s)	754
BsgI	GTGCAG	1 cut(s)	816
Bsh1236I	CGCG	1 cut(s)	1266
Bsh1285I	CGRYCG	1 cut(s)	1975
BshFI	GGCC	6 cut(s)	341, 880, 996, 1283, 1974, 2231
BshNI	GGYRCC	4 cut(s)	41, 775, 1222, 1867
BshTI	ACCGGT	1 cut(s)	1750
BsiEI	CGRYCG	1 cut(s)	1975
BsiHKAI	GWGCWC	1 cut(s)	2314
BsiSI	CCGG	1 cut(s)	1751
BslFI	GGGAC	2 cut(s)	77, 1401
BslI	CCNNNNNNNGG	4 cut(s)	1192, 1238, 1641, 2486
BsmAI	GTCTC	4 cut(s)	11, 533, 1127, 2063
BsmBI	CGTCTC	1 cut(s)	2063
BsmFI	GGGAC	2 cut(s)	77, 1401
BsmI	GAATGC	2 cut(s)	18, 517
BsnI	GGCC	6 cut(s)	341, 880, 996, 1283, 1974, 2231
Bsp1286I	GDGCHC	4 cut(s)	46, 778, 1656, 2314
Bsp1407I	TGTACA	1 cut(s)	934
Bsp143I	GATC	8 cut(s)	316, 676, 1126, 1673, 1729, 1744, 2083, 2359
Bsp1720I	GCTNAGC	1 cut(s)	1650
BspACI	CCGC	5 cut(s)	1458, 1484, 1921, 1975, 2104
BspANI	GGCC	6 cut(s)	341, 880, 996, 1283, 1974, 2231
BspFNI	CGCG	1 cut(s)	1266
BspHI	TCATGA	1 cut(s)	1170
BspLI	GGNNCC	5 cut(s)	43, 777, 879, 1224, 1869
BspMI	ACCTGC	2 cut(s)	22, 121
BspOI	GCTAGC	1 cut(s)	1376
BspPI	GGATC	3 cut(s)	324, 671, 1752
BspQI	GCTCTTC	1 cut(s)	237
BspT107I	GGYRCC	4 cut(s)	41, 775, 1222, 1867
BspTI	CTTAAG	2 cut(s)	169, 919
BsrDI	GCAATG	3 cut(s)	1396, 1952, 1984
BsrFI	RCCGGY	1 cut(s)	1750
BsrGI	TGTACA	1 cut(s)	934
BsrI	ACTGG	6 cut(s)	769, 1152, 1186, 1446, 1449, 2014
BssAI	RCCGGY	1 cut(s)	1750
BssECI	CCNNGG	2 cut(s)	1969, 2374
BssMI	GATC	8 cut(s)	316, 676, 1126, 1673, 1729, 1744, 2083, 2359
BssSI	CACGAG	2 cut(s)	282, 2366
BssT1I	CCWWGG	1 cut(s)	2374
Bst2BI	CACGAG	2 cut(s)	282, 2366
Bst2UI	CCWGG	5 cut(s)	473, 681, 1369, 2413, 2481
Bst4CI	ACNGT	8 cut(s)	458, 479, 489, 596, 1465, 1552, 1841, 2219
Bst6I	CTCTTC	6 cut(s)	219, 237, 723, 1297, 2189, 2487
BstAFI	CTTAAG	2 cut(s)	169, 919
BstAPI	GCANNNNNTGC	1 cut(s)	1646
BstAUI	TGTACA	1 cut(s)	934
BstBAI	YACGTR	1 cut(s)	368
BstC8I	GCNNGC	7 cut(s)	859, 1088, 1374, 1872, 1984, 2173, 2229
BstEII	GGTNACC	1 cut(s)	1363
BstENI	CCTNNNNNAGG	1 cut(s)	1639
BstF5I	GGATG	4 cut(s)	1454, 2150, 2212, 2305
BstFNI	CGCG	1 cut(s)	1266
BstH2I	RGCGCY	1 cut(s)	1245
BstHHI	GCGC	1 cut(s)	1244
BstKTI	GATC	8 cut(s)	319, 679, 1129, 1676, 1732, 1747, 2086, 2362
BstMAI	GTCTC	4 cut(s)	11, 533, 1127, 2063
BstMBI	GATC	8 cut(s)	316, 676, 1126, 1673, 1729, 1744, 2083, 2359
BstMCI	CGRYCG	1 cut(s)	1975
BstMWI	GCNNNNNNNGC	6 cut(s)	782, 1258, 1646, 1983, 1988, 2309
BstNI	CCWGG	5 cut(s)	473, 681, 1369, 2413, 2481
BstNSI	RCATGY	4 cut(s)	86, 1075, 1090, 1140
BstPI	GGTNACC	1 cut(s)	1363
BstSCI	CCNGG	5 cut(s)	471, 679, 1367, 2411, 2479
BstSFI	CTRYAG	3 cut(s)	780, 1461, 1551
BstSLI	GKGCMC	2 cut(s)	46, 778
BstUI	CGCG	1 cut(s)	1266
BstV1I	GCAGC	7 cut(s)	809, 877, 962, 1135, 1762, 2015, 2433
BstV2I	GAAGAC	1 cut(s)	2271
BstX2I	RGATCY	3 cut(s)	1673, 1744, 2083
BstXI	CCANNNNNNTGG	2 cut(s)	1577, 2419
BstYI	RGATCY	3 cut(s)	1673, 1744, 2083
BstZI	CGGCCG	1 cut(s)	1972
BsuI	GTATCC	1 cut(s)	1456
BsuRI	GGCC	6 cut(s)	341, 880, 996, 1283, 1974, 2231
BtgZI	GCGATG	1 cut(s)	1247
BtrI	CACGTC	3 cut(s)	1415, 1999, 2437
BtsCI	GGATG	4 cut(s)	1454, 2150, 2212, 2305
BtsI	GCAGTG	1 cut(s)	1869
BtsIMutI	CAGTG	6 cut(s)	126, 776, 1159, 1193, 1470, 1869
BveI	ACCTGC	2 cut(s)	22, 121
Cac8I	GCNNGC	7 cut(s)	859, 1088, 1374, 1872, 1984, 2173, 2229
CaiI	CAGNNNCTG	2 cut(s)	674, 2009
CciI	TCATGA	1 cut(s)	1170
CfoI	GCGC	1 cut(s)	1244
Cfr10I	RCCGGY	1 cut(s)	1750
Cfr13I	GGNCC	4 cut(s)	739, 878, 1282, 1963
CseI	GACGC	1 cut(s)	2080
Csp6I	GTAC	2 cut(s)	200, 935
CspAI	ACCGGT	1 cut(s)	1750
CviQI	GTAC	2 cut(s)	200, 935
DpnI	GATC	8 cut(s)	318, 678, 1128, 1675, 1731, 1746, 2085, 2361
DpnII	GATC	8 cut(s)	316, 676, 1126, 1673, 1729, 1744, 2083, 2359
EaeI	YGGCCR	2 cut(s)	994, 1972
EagI	CGGCCG	1 cut(s)	1972
Eam1104I	CTCTTC	6 cut(s)	219, 237, 723, 1297, 2189, 2487
EarI	CTCTTC	6 cut(s)	219, 237, 723, 1297, 2189, 2487
Ecl136II	GAGCTC	1 cut(s)	2312
EclXI	CGGCCG	1 cut(s)	1972
Eco130I	CCWWGG	1 cut(s)	2374
Eco147I	AGGCCT	1 cut(s)	341
Eco24I	GRGCYC	2 cut(s)	1656, 2314
Eco32I	GATATC	1 cut(s)	2458
Eco47I	GGWCC	2 cut(s)	739, 1963
Eco52I	CGGCCG	1 cut(s)	1972
Eco53kI	GAGCTC	1 cut(s)	2312
Eco57I	CTGAAG	5 cut(s)	707, 1619, 1722, 2213, 2265
Eco72I	CACGTG	1 cut(s)	368
Eco91I	GGTNACC	1 cut(s)	1363
EcoICRI	GAGCTC	1 cut(s)	2312
EcoNI	CCTNNNNNAGG	1 cut(s)	1639
EcoO109I	RGGNCCY	1 cut(s)	1963
EcoO65I	GGTNACC	1 cut(s)	1363
EcoRII	CCWGG	5 cut(s)	471, 679, 1367, 2411, 2479
EcoRV	GATATC	1 cut(s)	2458
EcoT14I	CCWWGG	1 cut(s)	2374
EcoT22I	ATGCAT	5 cut(s)	20, 517, 812, 1263, 1333
EcoT38I	GRGCYC	2 cut(s)	1656, 2314
ErhI	CCWWGG	1 cut(s)	2374
Esp3I	CGTCTC	1 cut(s)	2063
FalI	AAGNNNNNCTT	2 cut(s)	1113, 1145
FaqI	GGGAC	2 cut(s)	77, 1401
FauNDI	CATATG	1 cut(s)	1333
FbaI	TGATCA	1 cut(s)	1729
FokI	GGATG	4 cut(s)	1441, 2137, 2219, 2312
FriOI	GRGCYC	2 cut(s)	1656, 2314
FspBI	CTAG	7 cut(s)	930, 1160, 1373, 1386, 1406, 2100, 2243
GlaI	GCGC	1 cut(s)	1243
GsaI	CCCAGC	1 cut(s)	758
GsuI	CTGGAG	1 cut(s)	2502
HaeII	RGCGCY	1 cut(s)	1245
HaeIII	GGCC	6 cut(s)	341, 880, 996, 1283, 1974, 2231
HapII	CCGG	1 cut(s)	1751
HgaI	GACGC	1 cut(s)	2080
HhaI	GCGC	1 cut(s)	1244
Hin6I	GCGC	1 cut(s)	1242
HinP1I	GCGC	1 cut(s)	1242
HincII	GTYRAC	1 cut(s)	1661
HindII	GTYRAC	1 cut(s)	1661
HindIII	AAGCTT	2 cut(s)	1984, 2402
HpaII	CCGG	1 cut(s)	1751
HphI	GGTGA	4 cut(s)	1375, 1538, 1624, 2501
Hpy166II	GTNNAC	6 cut(s)	935, 1069, 1661, 1786, 1837, 2440
Hpy188III	TCNNGA	8 cut(s)	141, 320, 845, 1130, 1171, 1351, 2090, 2222
Hpy8I	GTNNAC	6 cut(s)	935, 1069, 1661, 1786, 1837, 2440
HpyAV	CCTTC	4 cut(s)	398, 437, 1168, 2329
HpyCH4III	ACNGT	8 cut(s)	458, 479, 489, 596, 1465, 1552, 1841, 2219
HpyCH4IV	ACGT	4 cut(s)	367, 1414, 1998, 2436
HpyF10VI	GCNNNNNNNGC	6 cut(s)	782, 1258, 1646, 1983, 1988, 2309
HpySE526I	ACGT	4 cut(s)	367, 1414, 1998, 2436
HspAI	GCGC	1 cut(s)	1242
Ksp22I	TGATCA	1 cut(s)	1729
Kzo9I	GATC	8 cut(s)	316, 676, 1126, 1673, 1729, 1744, 2083, 2359
LguI	GCTCTTC	1 cut(s)	237
Lsp1109I	GCAGC	7 cut(s)	809, 877, 962, 1135, 1762, 2015, 2433
MaeI	CTAG	7 cut(s)	930, 1160, 1373, 1386, 1406, 2100, 2243
MaeII	ACGT	4 cut(s)	367, 1414, 1998, 2436
MaeIII	GTNAC	4 cut(s)	255, 576, 1092, 1363
MalI	GATC	8 cut(s)	318, 678, 1128, 1675, 1731, 1746, 2085, 2361
MboI	GATC	8 cut(s)	316, 676, 1126, 1673, 1729, 1744, 2083, 2359
MfeI	CAATTG	1 cut(s)	543
MflI	RGATCY	3 cut(s)	1673, 1744, 2083
MhlI	GDGCHC	4 cut(s)	46, 778, 1656, 2314
MlsI	TGGCCA	1 cut(s)	996
MluNI	TGGCCA	1 cut(s)	996
MlyI	GAGTC	4 cut(s)	64, 1036, 1575, 2206
MmeI	TCCRAC	5 cut(s)	615, 1558, 2088, 2263, 2400
Mox20I	TGGCCA	1 cut(s)	996
Mph1103I	ATGCAT	5 cut(s)	20, 517, 812, 1263, 1333
MroXI	GAANNNNTTC	2 cut(s)	267, 2023
MscI	TGGCCA	1 cut(s)	996
MslI	CAYNNNNRTG	1 cut(s)	805
Msp20I	TGGCCA	1 cut(s)	996
MspA1I	CMGCKG	1 cut(s)	953
MspCI	CTTAAG	2 cut(s)	169, 919
MspI	CCGG	1 cut(s)	1751
MspR9I	CCNGG	5 cut(s)	473, 681, 1369, 2413, 2481
MunI	CAATTG	1 cut(s)	543
Mva1269I	GAATGC	2 cut(s)	18, 517
MvaI	CCWGG	5 cut(s)	473, 681, 1369, 2413, 2481
MvnI	CGCG	1 cut(s)	1266
MwoI	GCNNNNNNNGC	6 cut(s)	782, 1258, 1646, 1983, 1988, 2309
NdeI	CATATG	1 cut(s)	1333
NdeII	GATC	8 cut(s)	316, 676, 1126, 1673, 1729, 1744, 2083, 2359
NheI	GCTAGC	1 cut(s)	1372
NlaIV	GGNNCC	5 cut(s)	43, 777, 879, 1224, 1869
NmeAIII	GCCGAG	1 cut(s)	1950
NmuCI	GTSAC	1 cut(s)	1363
NsiI	ATGCAT	5 cut(s)	20, 517, 812, 1263, 1333
NspI	RCATGY	4 cut(s)	86, 1075, 1090, 1140
PaeI	GCATGC	1 cut(s)	1090
PagI	TCATGA	1 cut(s)	1170
PceI	AGGCCT	1 cut(s)	341
PciI	ACATGT	2 cut(s)	1071, 1136
PciSI	GCTCTTC	1 cut(s)	237
PctI	GAATGC	2 cut(s)	18, 517
PdmI	GAANNNNTTC	2 cut(s)	267, 2023
PfeI	GAWTC	8 cut(s)	106, 841, 912, 1021, 1409, 1559, 2141, 2183
PfoI	TCCNGGA	2 cut(s)	471, 679
PinAI	ACCGGT	1 cut(s)	1750
PleI	GAGTC	4 cut(s)	64, 1036, 1575, 2205
PmaCI	CACGTG	1 cut(s)	368
PmlI	CACGTG	1 cut(s)	368
PpsI	GAGTC	4 cut(s)	64, 1036, 1575, 2205
Ppu21I	YACGTR	1 cut(s)	368
PpuMI	RGGWCCY	1 cut(s)	1963
PscI	ACATGT	2 cut(s)	1071, 1136
PshBI	ATTAAT	3 cut(s)	560, 618, 645
Psp124BI	GAGCTC	1 cut(s)	2314
Psp5II	RGGWCCY	1 cut(s)	1963
Psp6I	CCWGG	5 cut(s)	471, 679, 1367, 2411, 2479
PspCI	CACGTG	1 cut(s)	368
PspEI	GGTNACC	1 cut(s)	1363
PspFI	CCCAGC	1 cut(s)	754
PspGI	CCWGG	5 cut(s)	471, 679, 1367, 2411, 2479
PspN4I	GGNNCC	5 cut(s)	43, 777, 879, 1224, 1869
PspPI	GGNCC	4 cut(s)	739, 878, 1282, 1963
PspPPI	RGGWCCY	1 cut(s)	1963
PstNI	CAGNNNCTG	2 cut(s)	674, 2009
PsuI	RGATCY	3 cut(s)	1673, 1744, 2083
PvuII	CAGCTG	1 cut(s)	953
RsaI	GTAC	2 cut(s)	201, 936
RsaNI	GTAC	2 cut(s)	200, 935
RseI	CAYNNNNRTG	1 cut(s)	805
SacI	GAGCTC	1 cut(s)	2314
SapI	GCTCTTC	1 cut(s)	237
Sau3AI	GATC	8 cut(s)	316, 676, 1126, 1673, 1729, 1744, 2083, 2359
Sau96I	GGNCC	4 cut(s)	739, 878, 1282, 1963
SchI	GAGTC	4 cut(s)	64, 1036, 1575, 2206
ScrFI	CCNGG	5 cut(s)	473, 681, 1369, 2413, 2481
SduI	GDGCHC	4 cut(s)	46, 778, 1656, 2314
SfcI	CTRYAG	3 cut(s)	780, 1461, 1551
SinI	GGWCC	2 cut(s)	739, 1963
SmiMI	CAYNNNNRTG	1 cut(s)	805
SmlI	CTYRAG	8 cut(s)	169, 919, 1055, 1108, 1130, 1217, 2117, 2222
SmoI	CTYRAG	8 cut(s)	169, 919, 1055, 1108, 1130, 1217, 2117, 2222
SphI	GCATGC	1 cut(s)	1090
SseBI	AGGCCT	1 cut(s)	341
SsiI	CCGC	5 cut(s)	1458, 1484, 1921, 1975, 2104
SspMI	CTAG	7 cut(s)	930, 1160, 1373, 1386, 1406, 2100, 2243
SstI	GAGCTC	1 cut(s)	2314
StuI	AGGCCT	1 cut(s)	341
StyD4I	CCNGG	5 cut(s)	471, 679, 1367, 2411, 2479
StyI	CCWWGG	1 cut(s)	2374
TaaI	ACNGT	8 cut(s)	458, 479, 489, 596, 1465, 1552, 1841, 2219
TaiI	ACGT	4 cut(s)	370, 1417, 2001, 2439
TaqI	TCGA	3 cut(s)	37, 1125, 2397
TaqII	GACCGA	1 cut(s)	2019
TatI	WGTACW	1 cut(s)	934
TauI	GCSGC	3 cut(s)	1487, 1924, 1977
TfiI	GAWTC	8 cut(s)	106, 841, 912, 1021, 1409, 1559, 2141, 2183
TscAI	CASTG	6 cut(s)	133, 776, 1159, 1193, 1470, 1869
TseFI	GTSAC	1 cut(s)	1363
TseI	GCWGC	7 cut(s)	797, 890, 950, 1148, 1775, 2003, 2446
Tsp45I	GTSAC	1 cut(s)	1363
TspDTI	ATGAA	7 cut(s)	137, 1187, 1313, 1385, 1443, 1623, 2051
TspGWI	ACGGA	1 cut(s)	779
TspRI	CASTG	6 cut(s)	133, 776, 1159, 1193, 1470, 1869
Vha464I	CTTAAG	2 cut(s)	169, 919
VpaK11BI	GGWCC	2 cut(s)	739, 1963
VspI	ATTAAT	3 cut(s)	560, 618, 645
XagI	CCTNNNNNAGG	1 cut(s)	1639
XapI	RAATTY	5 cut(s)	241, 381, 941, 1931, 2164
XceI	RCATGY	4 cut(s)	86, 1075, 1090, 1140
XmnI	GAANNNNTTC	2 cut(s)	267, 2023
XspI	CTAG	7 cut(s)	930, 1160, 1373, 1386, 1406, 2100, 2243
Zsp2I	ATGCAT	5 cut(s)	20, 517, 812, 1263, 1333

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.