Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0004196

Physical Location & Seq

Genomic Coordinates Forward (+)

81538488 .. 81543392

Gene Structure 4905 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000022175

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2127 bp

ATGTTATCAGCTAGCTGGGTGACAAGAACAAAGACTCAGTACAGATTAGAGAAGCCAAAGGACCTGGTTATACAAAATGAGGCCTTATTACTTCTTACTTACTTGACACGTGAAGCTGTGGAAATTAAAAAAATTGTGGTCTTTGAAGGGGTTTTTGAAAAGATTTTCAGCATTGTCAAAGAGGAAGGTCGCTCAGACGGTGGTGTTGTTGTCCAGGACTGTATTGAACTGTTAAACAACCTTATTCGGAAGAATGCATCTAATCAGATACTACTGAGGGAGACAATTGGATTTGAGCCATTAATGTCAATTTTGAATTCGTTGGAAACTATTAATTTGCTGATAATGGGAGGTTCAGAGGCTGATCCTGGAAAAGATGCAAATAAGCTGACAAACAAGACAACTCTTGTTCAGAAAAAAATCTTGGACCATCTTCTAATGCTGGGTGTAGAAAGCCAGTGGGCACCTGTAGCTGTCCGTTGTGCAGCATTACAATGCATCGGTTATCTGATTATCGGACATTCCAAGAATCTTGATGCCCTTGCAAGCAAAGTTCTCAGAGAGGGGCCACAGGAAGCTGCTCTGAACTCAATTCTACGAATCATCTTAAGGACATCTAGTGTACAAGAATTTGTTGCAGCTGATTATGTTTATAAGAGCTTTTGTGAGAAAAATGCTGATGGCCAAACAATGTTAGCATCAACATTGATTCCTCAACCACATTCAATGACTCATGCACCCCTTGAGGAAGATGTGAACATGTCATTTGGAAGCATGCTGTTACAAGGTCTTACCTTGAGTGAGAGTGAAGTCGATCTTGAGACATGTTGCAGAGCTGCCAGTGTTCTATCTCATGTCATGAAGGACAATATCCAGTGCAAGGAAAAGGCACCAACGCCATCTTTAGGCGCTTCTGAGCCTCTAATGCATTGCGTGATAAAATACTTGGCCCTTTCCTCTTCCATGAAAAACAAAGATGGAAAGTCAGGTGGAAATGCATATATTCAACCAATCCTCTTGAAAATGCTGGTGACTTGGCTAGCTGATTGCCCTAGTGCTGTTAATTGCTTCCTAGATTCACGTCCCCACATCACATATCTGCTTGAACTGGTATCCAGTTCATCCGCTACAGTGTTCGTAAAGGGATTGGCGGCCGTTCTTCTGGGAGGGTGTGTTATCTACAATAAATCAGGTGAAAGTGGGAAAGATTCTTTTACTGTAGTTGATTCCTTAAGCCAGAAGATTGGACTCACATCATACTTTCTGAAGTTTGATGAAATGAGAAAAAACTTCCTTTTCACCTCTGCAAGGTCTGCTCCCGAAGATGTTGACGAGAACAATTTATCTGATCAGAAGGATGAGGATCTACCGGTTCTCTCCTCAATCTTTGATGCTGCATTTGTAAACCTTGTTAATAGTTTAGAGGCAAACATCAGAGAAAAAATCGTTGAGGTTTACAGTAATCCAAAGGGCAAGGTGGCAGTGGTGCCAGCAGAATTGGAACAAAAGAGTGGGGAAAGTGATGGAGAGTATGTTAAGCGGCTGAAAGAATTTGTGGAAAAGCAATGCTCTGAAATACAGGACCTCCTCGGCCGCAATGCAAGCTTGGCTGAGGACTTGGCAGCAACTGGTGGGGGAAGTCATTCTCGGTCTGAGCAAGGCACAGGCTCAGATAGAGTTCATGTAGAGACGCTTAGACGAGATCTTCAAGAAGCAACTAGGCGGTTGGAGTTGCTCAAGGCAGAGAAAGCCAAGATTGAATCTGAGGCATCCATGTATAAATATTTAGCTGGCAAGATGGAATCCGACCTGAAGAGTCTATCGGATGCTTACAACAGTCTTGAGCAGGCCAATTTCCAACTAGAAAAGGAGGTAAGAGGTCAAAAGGGTGTGGGGTCTTCTGCCTTTCCAGATGTGGATGCAATTAGAGCTCAGGCAAGTGAAGAAGCTCAGAAGGAGAGTGAGGCAGAACTGAATGATCTTCTCGTGTGCCTTGGACAAGAACAGAGCAAGGTCGAAAAGCTTAGTGCCAGGTTGTTGGAGTTGGGGGAGGACGTGGACAAGCTGCTTGAAGATATCGGAGATGATATGGGATTGCCTGGAGATGGTGAAGAGGAGGAAGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005794 GO:0005795 GO:0005798 GO:0005829 GO:0006810 GO:0006886 GO:0006888 GO:0007275 GO:0008104 GO:0008150 GO:0008565 GO:0009791 GO:0009987 GO:0012505 GO:0012506 GO:0012507 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0016192 GO:0022406 GO:0030133 GO:0030134 GO:0030135 GO:0030658 GO:0030659 GO:0030660 GO:0030662 GO:0031090 GO:0031410 GO:0031982 GO:0031984 GO:0032501 GO:0032502 GO:0032527 GO:0033036 GO:0034613 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044433 GO:0044444 GO:0044446 GO:0044464 GO:0045056 GO:0045184 GO:0046907 GO:0048193 GO:0048211 GO:0048278 GO:0048856 GO:0051179 GO:0051234 GO:0051640 GO:0051641 GO:0051649 GO:0061024 GO:0061025 GO:0070727 GO:0071702 GO:0071705 GO:0071840 GO:0097708 GO:0098588 GO:0098791 GO:0098805 GO:0140056

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Uso1_p115_C Uso1_p115_head

Protein Analysis

709

Amino Acids

77.68

Weight (kDa)

4.91

Isoelectric Point (pI)

41.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Uso1_p115_head	PF04869	195 - 481	6.8e-27	Uso1 / p115 like vesicle tethering protein, head region
Uso1_p115_C	PF04871	582 - 706	2.9e-28	Uso1 / p115 like vesicle tethering protein, C terminal region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004196)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G27530
fragaria_vesca	FvH4_1g06690 FvH4_1g06690 FvH4_6g51710 FvH4_6g51710 FvH4_6g51710 FvH4_6g51710
malus_domestica	MD09G1023300.v1.1 MD17G1022800.v1.1
prunus_persica	Prupe.3G293500_v2.0.a1 Prupe.3G293600_v2.0.a1
pyrus_communis	pycom111g01940
rosa_chinensis	RchiOBHm_Chr2g0173241 RchiOBHm_Chr2g0173251
rosa_laevigata	RLG00000022173 RLG00000022175
rosa_multiflora	Rmu_sc0010961.1_g000008 Rmu_sc0010961.1_g000011
rosa_roxburghii	Rroxscaffold_2G00079090
rosa_rugosa	Rorug02G0566800 Rorug02G0566900 Rorug02G0566900 Rorug02G0566900
rosa_samantha	Rh2AG646700 Rh2BG657400 Rh2CG622600 Rh2CG623100 Rh2CG623200 Rh2DG671000 Rh2DG671500 Rh2DG671600
rosa_wichuraiana	Rw2G053120 Rw2G053130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	654
AccB1I	GGYRCC	3 cut(s)	463, 889, 1486
AciI	CCGC	5 cut(s)	1125, 1151, 1540, 1594, 1723
AclWI	GGATC	2 cut(s)	359, 1371
AcoI	YGGCCR	3 cut(s)	682, 1152, 1591
AcsI	RAATTY	3 cut(s)	316, 629, 1550
AcuI	CTGAAG	2 cut(s)	1286, 1832
AcvI	CACGTG	1 cut(s)	110
AfaI	GTAC	2 cut(s)	41, 624
AfiI	CCNNNNNNNGG	4 cut(s)	880, 905, 1308, 2105
AflII	CTTAAG	2 cut(s)	607, 1231
AflIII	ACRYGT	3 cut(s)	107, 759, 824
AgeI	ACCGGT	1 cut(s)	1369
AjiI	CACGTC	2 cut(s)	1082, 2056
AjnI	CCWGG	5 cut(s)	63, 213, 367, 2030, 2098
AjuI	GAANNNNNNNTTGG	2 cut(s)	407, 439
Alw21I	GWGCWC	1 cut(s)	1933
Alw26I	GTCTC	3 cut(s)	275, 815, 1682
AlwI	GGATC	2 cut(s)	359, 1371
AlwNI	CAGNNNCTG	2 cut(s)	362, 1628
AoxI	GGCC	7 cut(s)	81, 566, 682, 948, 1152, 1591, 1848
ApeKI	GCWGC	7 cut(s)	485, 578, 638, 836, 1394, 1622, 2065
ApoI	RAATTY	3 cut(s)	316, 629, 1550
AseI	ATTAAT	2 cut(s)	302, 333
AsiGI	ACCGGT	1 cut(s)	1369
Asp700I	GAANNNNTTC	1 cut(s)	1642
AspLEI	GCGC	1 cut(s)	911
AspS9I	GGNCC	5 cut(s)	61, 427, 566, 949, 1582
AsuHPI	GGTGA	5 cut(s)	31, 1042, 1205, 1291, 2120
AsuNHI	GCTAGC	2 cut(s)	11, 1039
AvaII	GGWCC	3 cut(s)	61, 427, 1582
BaeGI	GKGCMC	1 cut(s)	466
BalI	TGGCCA	1 cut(s)	684
BanI	GGYRCC	3 cut(s)	463, 889, 1486
BanII	GRGCYC	1 cut(s)	1933
BauI	CACGAG	1 cut(s)	1985
BbrPI	CACGTG	1 cut(s)	110
BbsI	GAAGAC	1 cut(s)	1890
Bbv12I	GWGCWC	1 cut(s)	1933
BbvCI	CCTCAGC	1 cut(s)	1611
BbvI	GCAGC	7 cut(s)	497, 565, 650, 823, 1381, 1634, 2052
BccI	CCATC	7 cut(s)	438, 674, 907, 971, 1517, 1792, 2099
BceAI	ACGGC	1 cut(s)	1139
BciT130I	CCWGG	5 cut(s)	65, 215, 369, 2032, 2100
BciVI	GTATCC	1 cut(s)	1123
BclI	TGATCA	1 cut(s)	1348
BcoDI	GTCTC	3 cut(s)	275, 815, 1682
BfaI	CTAG	7 cut(s)	12, 618, 1040, 1053, 1073, 1719, 1862
BfmI	CTRYAG	3 cut(s)	468, 1128, 1218
BfoI	RGCGCY	1 cut(s)	912
BfrI	CTTAAG	2 cut(s)	607, 1231
BfuI	GTATCC	1 cut(s)	1123
BglII	AGATCT	1 cut(s)	1702
Bme1390I	CCNGG	5 cut(s)	65, 215, 369, 2032, 2100
Bme18I	GGWCC	3 cut(s)	61, 427, 1582
BmgBI	CACGTC	2 cut(s)	1082, 2056
BmgT120I	GGNCC	5 cut(s)	61, 427, 566, 949, 1582
BmiI	GGNNCC	4 cut(s)	465, 567, 891, 1488
BmrFI	CCNGG	5 cut(s)	65, 215, 369, 2032, 2100
BmsI	GCATC	9 cut(s)	266, 367, 507, 526, 707, 1381, 1778, 1816, 1909
BmtI	GCTAGC	2 cut(s)	15, 1043
BpiI	GAAGAC	1 cut(s)	1890
BpmI	CTGGAG	1 cut(s)	2121
Bpu10I	CCTNAGC	2 cut(s)	1611, 1932
BpuEI	CTTGAG	5 cut(s)	764, 817, 839, 1721, 1862
BsaAI	YACGTR	1 cut(s)	110
BsaBI	GATNNNNATC	1 cut(s)	1362
BsaJI	CCNNGG	2 cut(s)	1588, 1993
BsaWI	WCCGGW	1 cut(s)	1369
BsaXI	ACNNNNNCTCC	6 cut(s)	1158, 1188, 1518, 1548, 1569, 1599
Bsc4I	CCNNNNNNNGG	4 cut(s)	880, 905, 1308, 2105
Bse118I	RCCGGY	1 cut(s)	1369
Bse1I	ACTGG	6 cut(s)	457, 840, 874, 1113, 1116, 1633
Bse3DI	GCAATG	3 cut(s)	928, 1571, 1603
Bse8I	GATNNNNATC	1 cut(s)	1362
BseBI	CCWGG	5 cut(s)	65, 215, 369, 2032, 2100
BseDI	CCNNGG	2 cut(s)	1588, 1993
BseGI	GGATG	5 cut(s)	1121, 1363, 1769, 1831, 1924
BseJI	GATNNNNATC	1 cut(s)	1362
BseLI	CCNNNNNNNGG	4 cut(s)	880, 905, 1308, 2105
BseMI	GCAATG	3 cut(s)	928, 1571, 1603
BseNI	ACTGG	6 cut(s)	457, 840, 874, 1113, 1116, 1633
BseRI	GAGGAG	2 cut(s)	1369, 1577
BseSI	GKGCMC	1 cut(s)	466
BseX3I	CGGCCG	2 cut(s)	1152, 1591
BseXI	GCAGC	7 cut(s)	497, 565, 650, 823, 1381, 1634, 2052
BseYI	CCCAGC	2 cut(s)	15, 442
BsgI	GTGCAG	1 cut(s)	504
Bsh1285I	CGRYCG	2 cut(s)	1155, 1594
BshFI	GGCC	7 cut(s)	83, 568, 684, 950, 1154, 1593, 1850
BshNI	GGYRCC	3 cut(s)	463, 889, 1486
BshTI	ACCGGT	1 cut(s)	1369
BsiEI	CGRYCG	2 cut(s)	1155, 1594
BsiHKAI	GWGCWC	1 cut(s)	1933
BsiSI	CCGG	1 cut(s)	1370
BslFI	GGGAC	1 cut(s)	1068
BslI	CCNNNNNNNGG	4 cut(s)	880, 905, 1308, 2105
BsmAI	GTCTC	3 cut(s)	275, 815, 1682
BsmBI	CGTCTC	1 cut(s)	1682
BsmFI	GGGAC	1 cut(s)	1068
BsmI	GAATGC	1 cut(s)	259
BsnI	GGCC	7 cut(s)	83, 568, 684, 950, 1154, 1593, 1850
Bsp1286I	GDGCHC	2 cut(s)	466, 1933
Bsp1407I	TGTACA	1 cut(s)	622
Bsp143I	GATC	6 cut(s)	364, 814, 1348, 1363, 1702, 1978
BspACI	CCGC	5 cut(s)	1125, 1151, 1540, 1594, 1723
BspANI	GGCC	7 cut(s)	83, 568, 684, 950, 1154, 1593, 1850
BspHI	TCATGA	1 cut(s)	858
BspLI	GGNNCC	4 cut(s)	465, 567, 891, 1488
BspOI	GCTAGC	2 cut(s)	15, 1043
BspPI	GGATC	2 cut(s)	359, 1371
BspT107I	GGYRCC	3 cut(s)	463, 889, 1486
BspTI	CTTAAG	2 cut(s)	607, 1231
BsrDI	GCAATG	3 cut(s)	928, 1571, 1603
BsrFI	RCCGGY	1 cut(s)	1369
BsrGI	TGTACA	1 cut(s)	622
BsrI	ACTGG	6 cut(s)	457, 840, 874, 1113, 1116, 1633
BssAI	RCCGGY	1 cut(s)	1369
BssECI	CCNNGG	2 cut(s)	1588, 1993
BssMI	GATC	6 cut(s)	364, 814, 1348, 1363, 1702, 1978
BssSI	CACGAG	1 cut(s)	1985
BssT1I	CCWWGG	1 cut(s)	1993
Bst2BI	CACGAG	1 cut(s)	1985
Bst2UI	CCWGG	5 cut(s)	65, 215, 369, 2032, 2100
Bst4CI	ACNGT	7 cut(s)	200, 221, 231, 1132, 1219, 1460, 1838
Bst6I	CTCTTC	3 cut(s)	964, 1808, 2106
BstAFI	CTTAAG	2 cut(s)	607, 1231
BstAPI	GCANNNNNTGC	1 cut(s)	1313
BstAUI	TGTACA	1 cut(s)	622
BstBAI	YACGTR	1 cut(s)	110
BstC8I	GCNNGC	8 cut(s)	13, 547, 776, 1041, 1491, 1603, 1792, 1848
BstENI	CCTNNNNNAGG	1 cut(s)	1306
BstF5I	GGATG	5 cut(s)	1121, 1363, 1769, 1831, 1924
BstH2I	RGCGCY	1 cut(s)	912
BstHHI	GCGC	1 cut(s)	911
BstKTI	GATC	6 cut(s)	367, 817, 1351, 1366, 1705, 1981
BstMAI	GTCTC	3 cut(s)	275, 815, 1682
BstMBI	GATC	6 cut(s)	364, 814, 1348, 1363, 1702, 1978
BstMCI	CGRYCG	2 cut(s)	1155, 1594
BstMWI	GCNNNNNNNGC	7 cut(s)	470, 925, 1313, 1602, 1607, 1748, 1928
BstNI	CCWGG	5 cut(s)	65, 215, 369, 2032, 2100
BstNSI	RCATGY	3 cut(s)	763, 778, 828
BstSCI	CCNGG	5 cut(s)	63, 213, 367, 2030, 2098
BstSFI	CTRYAG	3 cut(s)	468, 1128, 1218
BstSLI	GKGCMC	1 cut(s)	466
BstV1I	GCAGC	7 cut(s)	497, 565, 650, 823, 1381, 1634, 2052
BstV2I	GAAGAC	1 cut(s)	1890
BstX2I	RGATCY	2 cut(s)	1363, 1702
BstXI	CCANNNNNNTGG	2 cut(s)	1244, 2038
BstYI	RGATCY	2 cut(s)	1363, 1702
BstZI	CGGCCG	2 cut(s)	1152, 1591
BsuI	GTATCC	1 cut(s)	1123
BsuRI	GGCC	7 cut(s)	83, 568, 684, 950, 1154, 1593, 1850
BtrI	CACGTC	2 cut(s)	1082, 2056
BtsCI	GGATG	5 cut(s)	1121, 1363, 1769, 1831, 1924
BtsI	GCAGTG	1 cut(s)	1488
BtsIMutI	CAGTG	5 cut(s)	464, 847, 881, 1137, 1488
Cac8I	GCNNGC	8 cut(s)	13, 547, 776, 1041, 1491, 1603, 1792, 1848
CaiI	CAGNNNCTG	2 cut(s)	362, 1628
CciI	TCATGA	1 cut(s)	858
CfoI	GCGC	1 cut(s)	911
Cfr10I	RCCGGY	1 cut(s)	1369
Cfr13I	GGNCC	5 cut(s)	61, 427, 566, 949, 1582
CseI	GACGC	1 cut(s)	1699
CsiI	ACCWGGT	1 cut(s)	63
Csp6I	GTAC	2 cut(s)	40, 623
CspAI	ACCGGT	1 cut(s)	1369
CviAII	CATG	9 cut(s)	734, 760, 775, 825, 854, 859, 964, 1682, 1774
CviQI	GTAC	2 cut(s)	40, 623
DpnI	GATC	6 cut(s)	366, 816, 1350, 1365, 1704, 1980
DpnII	GATC	6 cut(s)	364, 814, 1348, 1363, 1702, 1978
EaeI	YGGCCR	3 cut(s)	682, 1152, 1591
EagI	CGGCCG	2 cut(s)	1152, 1591
Eam1104I	CTCTTC	3 cut(s)	964, 1808, 2106
EarI	CTCTTC	3 cut(s)	964, 1808, 2106
Ecl136II	GAGCTC	1 cut(s)	1931
EclXI	CGGCCG	2 cut(s)	1152, 1591
Eco130I	CCWWGG	1 cut(s)	1993
Eco147I	AGGCCT	1 cut(s)	83
Eco24I	GRGCYC	1 cut(s)	1933
Eco32I	GATATC	1 cut(s)	2077
Eco47I	GGWCC	3 cut(s)	61, 427, 1582
Eco52I	CGGCCG	2 cut(s)	1152, 1591
Eco53kI	GAGCTC	1 cut(s)	1931
Eco57I	CTGAAG	2 cut(s)	1286, 1832
Eco72I	CACGTG	1 cut(s)	110
EcoICRI	GAGCTC	1 cut(s)	1931
EcoNI	CCTNNNNNAGG	1 cut(s)	1306
EcoO109I	RGGNCCY	2 cut(s)	61, 1582
EcoRI	GAATTC	1 cut(s)	316
EcoRII	CCWGG	5 cut(s)	63, 213, 367, 2030, 2098
EcoRV	GATATC	1 cut(s)	2077
EcoT14I	CCWWGG	1 cut(s)	1993
EcoT22I	ATGCAT	4 cut(s)	259, 500, 930, 1000
EcoT38I	GRGCYC	1 cut(s)	1933
ErhI	CCWWGG	1 cut(s)	1993
Esp3I	CGTCTC	1 cut(s)	1682
FaeI	CATG	9 cut(s)	737, 763, 778, 828, 857, 862, 967, 1685, 1777
FalI	AAGNNNNNCTT	2 cut(s)	801, 833
FaqI	GGGAC	1 cut(s)	1068
FatI	CATG	9 cut(s)	733, 759, 774, 824, 853, 858, 963, 1681, 1773
FbaI	TGATCA	1 cut(s)	1348
FokI	GGATG	5 cut(s)	1108, 1370, 1756, 1838, 1931
FriOI	GRGCYC	1 cut(s)	1933
FspBI	CTAG	7 cut(s)	12, 618, 1040, 1053, 1073, 1719, 1862
GlaI	GCGC	1 cut(s)	910
GsaI	CCCAGC	2 cut(s)	19, 446
GsuI	CTGGAG	1 cut(s)	2121
HaeII	RGCGCY	1 cut(s)	912
HaeIII	GGCC	7 cut(s)	83, 568, 684, 950, 1154, 1593, 1850
HapII	CCGG	1 cut(s)	1370
HgaI	GACGC	1 cut(s)	1699
HhaI	GCGC	1 cut(s)	911
Hin1II	CATG	9 cut(s)	737, 763, 778, 828, 857, 862, 967, 1685, 1777
Hin6I	GCGC	1 cut(s)	909
HinP1I	GCGC	1 cut(s)	909
HincII	GTYRAC	1 cut(s)	1330
HindII	GTYRAC	1 cut(s)	1330
HindIII	AAGCTT	2 cut(s)	1603, 2021
HpaII	CCGG	1 cut(s)	1370
HphI	GGTGA	5 cut(s)	31, 1042, 1205, 1291, 2120
Hpy166II	GTNNAC	6 cut(s)	623, 757, 1330, 1405, 1456, 2059
Hpy188III	TCNNGA	8 cut(s)	533, 818, 859, 1018, 1319, 1709, 1841, 1910
Hpy8I	GTNNAC	6 cut(s)	623, 757, 1330, 1405, 1456, 2059
HpyAV	CCTTC	5 cut(s)	140, 179, 856, 1348, 1948
HpyCH4III	ACNGT	7 cut(s)	200, 221, 231, 1132, 1219, 1460, 1838
HpyCH4IV	ACGT	3 cut(s)	109, 1081, 2055
HpyF10VI	GCNNNNNNNGC	7 cut(s)	470, 925, 1313, 1602, 1607, 1748, 1928
HpySE526I	ACGT	3 cut(s)	109, 1081, 2055
Hsp92II	CATG	9 cut(s)	737, 763, 778, 828, 857, 862, 967, 1685, 1777
HspAI	GCGC	1 cut(s)	909
Ksp22I	TGATCA	1 cut(s)	1348
Kzo9I	GATC	6 cut(s)	364, 814, 1348, 1363, 1702, 1978
LmnI	GCTCC	1 cut(s)	1321
Lsp1109I	GCAGC	7 cut(s)	497, 565, 650, 823, 1381, 1634, 2052
LweI	GCATC	9 cut(s)	266, 367, 507, 526, 707, 1381, 1778, 1816, 1909
MabI	ACCWGGT	1 cut(s)	63
MaeI	CTAG	7 cut(s)	12, 618, 1040, 1053, 1073, 1719, 1862
MaeII	ACGT	3 cut(s)	109, 1081, 2055
MaeIII	GTNAC	3 cut(s)	19, 780, 1030
MalI	GATC	6 cut(s)	366, 816, 1350, 1365, 1704, 1980
MboI	GATC	6 cut(s)	364, 814, 1348, 1363, 1702, 1978
MfeI	CAATTG	1 cut(s)	285
MflI	RGATCY	2 cut(s)	1363, 1702
MhlI	GDGCHC	2 cut(s)	466, 1933
MlsI	TGGCCA	1 cut(s)	684
MluNI	TGGCCA	1 cut(s)	684
MlyI	GAGTC	4 cut(s)	28, 724, 1242, 1825
MmeI	TCCRAC	5 cut(s)	303, 1707, 1830, 1882, 2019
Mox20I	TGGCCA	1 cut(s)	684
Mph1103I	ATGCAT	4 cut(s)	259, 500, 930, 1000
MroXI	GAANNNNTTC	1 cut(s)	1642
MscI	TGGCCA	1 cut(s)	684
MseI	TTAA	9 cut(s)	126, 233, 302, 333, 608, 1062, 1232, 1413, 1536
MslI	CAYNNNNRTG	1 cut(s)	493
Msp20I	TGGCCA	1 cut(s)	684
MspA1I	CMGCKG	1 cut(s)	641
MspCI	CTTAAG	2 cut(s)	607, 1231
MspI	CCGG	1 cut(s)	1370
MspR9I	CCNGG	5 cut(s)	65, 215, 369, 2032, 2100
MunI	CAATTG	1 cut(s)	285
Mva1269I	GAATGC	1 cut(s)	259
MvaI	CCWGG	5 cut(s)	65, 215, 369, 2032, 2100
MwoI	GCNNNNNNNGC	7 cut(s)	470, 925, 1313, 1602, 1607, 1748, 1928
NdeII	GATC	6 cut(s)	364, 814, 1348, 1363, 1702, 1978
NheI	GCTAGC	2 cut(s)	11, 1039
NlaIII	CATG	9 cut(s)	737, 763, 778, 828, 857, 862, 967, 1685, 1777
NlaIV	GGNNCC	4 cut(s)	465, 567, 891, 1488
NmeAIII	GCCGAG	1 cut(s)	1569
NmuCI	GTSAC	2 cut(s)	19, 1030
NsiI	ATGCAT	4 cut(s)	259, 500, 930, 1000
NspI	RCATGY	3 cut(s)	763, 778, 828
PaeI	GCATGC	1 cut(s)	778
PagI	TCATGA	1 cut(s)	858
PceI	AGGCCT	1 cut(s)	83
PciI	ACATGT	2 cut(s)	759, 824
PctI	GAATGC	1 cut(s)	259
PdmI	GAANNNNTTC	1 cut(s)	1642
PfeI	GAWTC	8 cut(s)	529, 600, 709, 1076, 1208, 1226, 1760, 1802
PfoI	TCCNGGA	2 cut(s)	213, 367
PinAI	ACCGGT	1 cut(s)	1369
PleI	GAGTC	4 cut(s)	28, 724, 1242, 1824
PmaCI	CACGTG	1 cut(s)	110
PmlI	CACGTG	1 cut(s)	110
PpsI	GAGTC	4 cut(s)	28, 724, 1242, 1824
Ppu21I	YACGTR	1 cut(s)	110
PpuMI	RGGWCCY	2 cut(s)	61, 1582
PscI	ACATGT	2 cut(s)	759, 824
PshBI	ATTAAT	2 cut(s)	302, 333
PsiI	TTATAA	1 cut(s)	654
Psp124BI	GAGCTC	1 cut(s)	1933
Psp5II	RGGWCCY	2 cut(s)	61, 1582
Psp6I	CCWGG	5 cut(s)	63, 213, 367, 2030, 2098
PspCI	CACGTG	1 cut(s)	110
PspFI	CCCAGC	2 cut(s)	15, 442
PspGI	CCWGG	5 cut(s)	63, 213, 367, 2030, 2098
PspN4I	GGNNCC	4 cut(s)	465, 567, 891, 1488
PspPI	GGNCC	5 cut(s)	61, 427, 566, 949, 1582
PspPPI	RGGWCCY	2 cut(s)	61, 1582
PstNI	CAGNNNCTG	2 cut(s)	362, 1628
PsuI	RGATCY	2 cut(s)	1363, 1702
PvuII	CAGCTG	1 cut(s)	641
RsaI	GTAC	2 cut(s)	41, 624
RsaNI	GTAC	2 cut(s)	40, 623
RseI	CAYNNNNRTG	1 cut(s)	493
SacI	GAGCTC	1 cut(s)	1933
SaqAI	TTAA	9 cut(s)	126, 233, 302, 333, 608, 1062, 1232, 1413, 1536
Sau3AI	GATC	6 cut(s)	364, 814, 1348, 1363, 1702, 1978
Sau96I	GGNCC	5 cut(s)	61, 427, 566, 949, 1582
SchI	GAGTC	4 cut(s)	28, 724, 1242, 1825
ScrFI	CCNGG	5 cut(s)	65, 215, 369, 2032, 2100
SduI	GDGCHC	2 cut(s)	466, 1933
SexAI	ACCWGGT	1 cut(s)	63
SfaNI	GCATC	9 cut(s)	266, 367, 507, 526, 707, 1381, 1778, 1816, 1909
SfcI	CTRYAG	3 cut(s)	468, 1128, 1218
SinI	GGWCC	3 cut(s)	61, 427, 1582
SmiMI	CAYNNNNRTG	1 cut(s)	493
SmlI	CTYRAG	7 cut(s)	607, 743, 796, 818, 1231, 1736, 1841
SmoI	CTYRAG	7 cut(s)	607, 743, 796, 818, 1231, 1736, 1841
SphI	GCATGC	1 cut(s)	778
SseBI	AGGCCT	1 cut(s)	83
SsiI	CCGC	5 cut(s)	1125, 1151, 1540, 1594, 1723
SspI	AATATT	1 cut(s)	1784
SspMI	CTAG	7 cut(s)	12, 618, 1040, 1053, 1073, 1719, 1862
SstI	GAGCTC	1 cut(s)	1933
StuI	AGGCCT	1 cut(s)	83
StyD4I	CCNGG	5 cut(s)	63, 213, 367, 2030, 2098
StyI	CCWWGG	1 cut(s)	1993
TaaI	ACNGT	7 cut(s)	200, 221, 231, 1132, 1219, 1460, 1838
TaiI	ACGT	3 cut(s)	112, 1084, 2058
TaqI	TCGA	2 cut(s)	813, 2016
TaqII	GACCGA	1 cut(s)	1638
TatI	WGTACW	2 cut(s)	39, 622
TauI	GCSGC	3 cut(s)	1154, 1543, 1596
TfiI	GAWTC	8 cut(s)	529, 600, 709, 1076, 1208, 1226, 1760, 1802
Tru1I	TTAA	9 cut(s)	126, 233, 302, 333, 608, 1062, 1232, 1413, 1536
Tru9I	TTAA	9 cut(s)	126, 233, 302, 333, 608, 1062, 1232, 1413, 1536
TscAI	CASTG	5 cut(s)	464, 847, 881, 1137, 1488
TseFI	GTSAC	2 cut(s)	19, 1030
TseI	GCWGC	7 cut(s)	485, 578, 638, 836, 1394, 1622, 2065
Tsp45I	GTSAC	2 cut(s)	19, 1030
TspDTI	ATGAA	5 cut(s)	875, 980, 1110, 1290, 1670
TspGWI	ACGGA	1 cut(s)	467
TspRI	CASTG	5 cut(s)	464, 847, 881, 1137, 1488
Vha464I	CTTAAG	2 cut(s)	607, 1231
VpaK11BI	GGWCC	3 cut(s)	61, 427, 1582
VspI	ATTAAT	2 cut(s)	302, 333
XagI	CCTNNNNNAGG	1 cut(s)	1306
XapI	RAATTY	3 cut(s)	316, 629, 1550
XceI	RCATGY	3 cut(s)	763, 778, 828
XmnI	GAANNNNTTC	1 cut(s)	1642
XspI	CTAG	7 cut(s)	12, 618, 1040, 1053, 1073, 1719, 1862
Zsp2I	ATGCAT	4 cut(s)	259, 500, 930, 1000

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.