Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0004196

Physical Location & Seq

Genomic Coordinates Forward (+)

80982950 .. 80986813

Gene Structure 3864 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G053130.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1923 bp

ATGGGGAAGGCAATGCCGGAAACTCCAGCTCGGAATGGCTGTGGGTTCTTGCATTTAAGCTTTCGATGCCGGAAAAGGTGTGTGACCTTAGTGGTTACTTGGCAGAGAAGAAGATTTGCTGCAGTAGAAGTGTTGTTGTGGCATAGCTGTTACGTTTGTGTTGTTATGTCAGAAGCTGCAAAAGATTTGGTTGGTTCGAGTAAACGCCAAAAATTAGGACCAGACTACTTTGGTTACTATACACATGAAGTGGTAGAGTTGTTGTCTCGAAATGAAGATGTTTCACCTTTTGCTTCCGAATCCTCAGATATATCTCGAAGCAGATATGTGGAGATGATAGAACCTGTTGTAGCTTTGAGCCGGTTAAAATCACAGCTAGAGAGCAGAAAGTGTTTATCAAGAGGTGCAGCAAGTGATGTTGATGCAGGGAAAGCACCTCCTCCTAAGAAACTAAAGAGATCTTCATGCTCTTCTAGCAGCCTCTCTGCACTTTCTAGTCCCACCAATTCCAAGAATCTTGATGCCTTGCGAGGCAAAGTTCTCGGAGAGGGGCCACAGGAACCAGCTCTAAACTCAATTCTACGAATCATCTTAAGGACATCTAGTGTACAAGATTTTGTTGCAGCTGATTATGTTTTTAAGAGCTTTTGTGAGAAAAATGCTGATCGCCAAACAATGTTAGCGTCAACATTGATTCCTCAACCACATTCAATGACTCATGCACCCCTTGAGGAAGATGTGAACATGTCATTTGGAAGCATGCTGTTACAAGGTCTTGCCTTGAGTGAGAGTGAAGTCGATCTTGAGACATGTTGCAGAGCTGCCAATGTTCTATCTCATGTCATGAAGGACAATATCCAGTGCAAGGTAAAGGTGTTGCATATTGAACTTGAGGCACCAACGCCATCTTTAGGCGCTTCTGAGCCTCTAATGCATCGCGTGGTAAAATACTTGGCCCTTTCCTCTTCCATGAAAAACAAAGATGGAAAGTCAAGTGGAAATGCATATATTCAACCAATGCTCTTGAAAATGCTGGTGACTTGTTCATCCGCTACAGTGTTCATAAAGGGATTGGTGGCTGTTCTTCTGGGAGAGTGTGTTATCTACAATAAATCAGGTGAAAGTGGGAAAGATGCTTTTACTGTAGTTGATTACATAAGCCAGAAGAAGGATGAGGATCTACCGGTTCTCTCCTCAATCTTTGATGTTGCATTTGTAAACCTTGTTAAGAGTTTAGAGGCAAACATCAAAAAAATCGTTGAGGTTTACACTCATCCAAAGAGCAAGGTGGCAGTGATGCCAGCAGAATTGGAACCAAAGAGTGGGGAAAGTGATGGGGAGTATGTTAAGCGGCTGAAAGAATTTGTGGAAAAGCAGTGCTCTGAAATACAGGACCTCCTTGGCCGCAATGCAAGCTTGGCTGAGGACGTGGGAGCAACTGGTGGGGGAAGTCATTCTGAGTCTGAGCAAGGCACAGGCTCAGATAGAGTTCATGTAGAGACACTTAGACGAGATCTTCAAGAAGCATCCAGGCGGTTGGAGTTGCTCAAGGCAGAGAAAGCCAAGATTGAATCCGAGGCATCCATGTATAAAAATTTAGCTGGCAAGATGGAATCCGACCTGAAGAGTCTATCAGATGCTTGCAACAGTCTTGAGCAGGCCAATTTCCAACTAGAAAAGGAGGTAAGAGGTCAAAAGAGTGTGGGGTCTTCGGCCTCTCCAGATGTGGATGCAATTAGAGCTCAGGCAAGGGAAGAAGCTCAGATGGAGAGCGAGGCAGAACTGAATGATCCTCTCGTGTGCCTTGGACAAGAACAGAGCAAGGTCGAAAAGCTTAGTGCCAGGTTGTTGGAGTTGGGGGAGGACGTGGACAAGCTGCTCGAAGATATCGGAGATGATATGGGGATTGCCTGGAGATGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005794 GO:0005795 GO:0005798 GO:0005829 GO:0006810 GO:0006886 GO:0006888 GO:0007275 GO:0008104 GO:0008150 GO:0008565 GO:0009791 GO:0009987 GO:0012505 GO:0012506 GO:0012507 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0016192 GO:0022406 GO:0030133 GO:0030134 GO:0030135 GO:0030658 GO:0030659 GO:0030660 GO:0030662 GO:0031090 GO:0031410 GO:0031982 GO:0031984 GO:0032501 GO:0032502 GO:0032527 GO:0033036 GO:0034613 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044433 GO:0044444 GO:0044446 GO:0044464 GO:0045056 GO:0045184 GO:0046907 GO:0048193 GO:0048211 GO:0048278 GO:0048856 GO:0051179 GO:0051234 GO:0051640 GO:0051641 GO:0051649 GO:0061024 GO:0061025 GO:0070727 GO:0071702 GO:0071705 GO:0071840 GO:0097708 GO:0098588 GO:0098791 GO:0098805 GO:0140056

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Uso1_p115_C Uso1_p115_head

Protein Analysis

640

Amino Acids

70.22

Weight (kDa)

5.84

Isoelectric Point (pI)

52.61

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Uso1_p115_C	PF04871	519 - 635	2.1e-25	Uso1 / p115 like vesicle tethering protein, C terminal region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0004196)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G27530
fragaria_vesca	FvH4_1g06690 FvH4_1g06690 FvH4_6g51710 FvH4_6g51710 FvH4_6g51710 FvH4_6g51710
malus_domestica	MD09G1023300.v1.1 MD17G1022800.v1.1
prunus_persica	Prupe.3G293500_v2.0.a1 Prupe.3G293600_v2.0.a1
pyrus_communis	pycom111g01940
rosa_chinensis	RchiOBHm_Chr2g0173241 RchiOBHm_Chr2g0173251
rosa_laevigata	RLG00000022173 RLG00000022175
rosa_multiflora	Rmu_sc0010961.1_g000008 Rmu_sc0010961.1_g000011
rosa_roxburghii	Rroxscaffold_2G00079090
rosa_rugosa	Rorug02G0566800 Rorug02G0566900 Rorug02G0566900 Rorug02G0566900
rosa_samantha	Rh2AG646700 Rh2BG657400 Rh2CG622600 Rh2CG623100 Rh2CG623200 Rh2DG671000 Rh2DG671500 Rh2DG671600
rosa_wichuraiana	Rw2G053120 Rw2G053130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	895
AccB7I	CCANNNNNTGG	1 cut(s)	1322
AccII	CGCG	1 cut(s)	939
AciI	CCGC	4 cut(s)	1050, 1351, 1405, 1534
AclWI	GGATC	2 cut(s)	1185, 1784
AcoI	YGGCCR	1 cut(s)	1402
AcsI	RAATTY	2 cut(s)	1361, 1594
AcuI	CTGAAG	1 cut(s)	1643
AfaI	GTAC	1 cut(s)	609
AfiI	CCNNNNNNNGG	5 cut(s)	865, 911, 1168, 1322, 1917
AflII	CTTAAG	1 cut(s)	592
AflIII	ACRYGT	2 cut(s)	744, 809
AgeI	ACCGGT	1 cut(s)	1183
AgsI	TTSAA	6 cut(s)	711, 887, 1013, 1027, 1520, 1571
AjiI	CACGTC	2 cut(s)	1429, 1867
AjnI	CCWGG	3 cut(s)	1529, 1841, 1910
Alw21I	GWGCWC	2 cut(s)	1382, 1744
Alw26I	GTCTC	3 cut(s)	270, 800, 1493
AlwI	GGATC	2 cut(s)	1185, 1784
AlwNI	CAGNNNCTG	1 cut(s)	176
AoxI	GGCC	5 cut(s)	551, 954, 1402, 1659, 1713
ApeKI	GCWGC	7 cut(s)	119, 176, 407, 477, 623, 821, 1876
ApoI	RAATTY	2 cut(s)	1361, 1594
AsiGI	ACCGGT	1 cut(s)	1183
Asp700I	GAANNNNTTC	1 cut(s)	1453
AspLEI	GCGC	1 cut(s)	917
AspS9I	GGNCC	4 cut(s)	218, 551, 955, 1393
AsuHPI	GGTGA	3 cut(s)	276, 1048, 1130
AvaII	GGWCC	2 cut(s)	218, 1393
BanI	GGYRCC	1 cut(s)	895
BanII	GRGCYC	1 cut(s)	1744
BauI	CACGAG	1 cut(s)	1796
BbsI	GAAGAC	1 cut(s)	1701
Bbv12I	GWGCWC	2 cut(s)	1382, 1744
BbvCI	CCTCAGC	1 cut(s)	1422
BbvI	GCAGC	7 cut(s)	106, 163, 419, 489, 635, 808, 1863
BccI	CCATC	6 cut(s)	913, 977, 1328, 1603, 1759, 1911
BcgI	CGANNNNNNTGC	2 cut(s)	523, 557
BciT130I	CCWGG	3 cut(s)	1531, 1843, 1912
BcoDI	GTCTC	3 cut(s)	270, 800, 1493
BfaI	CTAG	5 cut(s)	377, 474, 495, 603, 1673
BfmI	CTRYAG	3 cut(s)	120, 1053, 1143
BfoI	RGCGCY	1 cut(s)	918
BfrI	CTTAAG	1 cut(s)	592
BglII	AGATCT	2 cut(s)	458, 1513
BisI	GCNGC	9 cut(s)	120, 177, 408, 478, 624, 822, 1352, 1405, 1877
BlsI	GCNGC	9 cut(s)	121, 178, 409, 479, 625, 823, 1353, 1406, 1878
Bme1390I	CCNGG	3 cut(s)	1531, 1843, 1912
Bme18I	GGWCC	2 cut(s)	218, 1393
BmgBI	CACGTC	2 cut(s)	1429, 1867
BmgT120I	GGNCC	4 cut(s)	218, 551, 955, 1393
BmiI	GGNNCC	4 cut(s)	552, 561, 897, 1314
BmrFI	CCNGG	3 cut(s)	1531, 1843, 1912
BpiI	GAAGAC	1 cut(s)	1701
BpmI	CTGGAG	2 cut(s)	9, 1704
Bpu10I	CCTNAGC	2 cut(s)	1422, 1743
BpuEI	CTTGAG	6 cut(s)	749, 802, 824, 911, 1532, 1673
BsaBI	GATNNNNATC	1 cut(s)	1176
BsaJI	CCNNGG	3 cut(s)	1399, 1575, 1804
BsaWI	WCCGGW	1 cut(s)	1183
BsaXI	ACNNNNNCTCC	4 cut(s)	1083, 1113, 1380, 1410
Bsc4I	CCNNNNNNNGG	5 cut(s)	865, 911, 1168, 1322, 1917
Bse118I	RCCGGY	2 cut(s)	360, 1183
Bse1I	ACTGG	2 cut(s)	859, 1444
Bse3DI	GCAATG	2 cut(s)	18, 1414
Bse8I	GATNNNNATC	1 cut(s)	1176
BseBI	CCWGG	3 cut(s)	1531, 1843, 1912
BseDI	CCNNGG	3 cut(s)	1399, 1575, 1804
BseGI	GGATG	6 cut(s)	1046, 1177, 1273, 1526, 1580, 1735
BseJI	GATNNNNATC	1 cut(s)	1176
BseLI	CCNNNNNNNGG	5 cut(s)	865, 911, 1168, 1322, 1917
BseMI	GCAATG	2 cut(s)	18, 1414
BseMII	CTCAG	8 cut(s)	318, 912, 1413, 1449, 1455, 1494, 1757, 1775
BseNI	ACTGG	2 cut(s)	859, 1444
BseRI	GAGGAG	2 cut(s)	429, 1183
BseXI	GCAGC	7 cut(s)	106, 163, 419, 489, 635, 808, 1863
BsgI	GTGCAG	2 cut(s)	426, 471
Bsh1236I	CGCG	1 cut(s)	939
BshFI	GGCC	5 cut(s)	553, 956, 1404, 1661, 1715
BshNI	GGYRCC	1 cut(s)	895
BshTI	ACCGGT	1 cut(s)	1183
BsiHKAI	GWGCWC	2 cut(s)	1382, 1744
BsiSI	CCGG	4 cut(s)	17, 70, 361, 1184
BslFI	GGGAC	1 cut(s)	483
BslI	CCNNNNNNNGG	5 cut(s)	865, 911, 1168, 1322, 1917
BsmAI	GTCTC	3 cut(s)	270, 800, 1493
BsmFI	GGGAC	1 cut(s)	483
BsnI	GGCC	5 cut(s)	553, 956, 1404, 1661, 1715
Bsp1286I	GDGCHC	2 cut(s)	1382, 1744
Bsp1407I	TGTACA	1 cut(s)	607
Bsp143I	GATC	6 cut(s)	458, 664, 799, 1177, 1513, 1789
BspACI	CCGC	4 cut(s)	1050, 1351, 1405, 1534
BspANI	GGCC	5 cut(s)	553, 956, 1404, 1661, 1715
BspCNI	CTCAG	8 cut(s)	317, 913, 1414, 1450, 1456, 1493, 1756, 1774
BspFNI	CGCG	1 cut(s)	939
BspHI	TCATGA	1 cut(s)	843
BspLI	GGNNCC	4 cut(s)	552, 561, 897, 1314
BspMAI	CTGCAG	1 cut(s)	124
BspPI	GGATC	2 cut(s)	1185, 1784
BspQI	GCTCTTC	1 cut(s)	475
BspT107I	GGYRCC	1 cut(s)	895
BspTI	CTTAAG	1 cut(s)	592
BsrDI	GCAATG	2 cut(s)	18, 1414
BsrFI	RCCGGY	2 cut(s)	360, 1183
BsrGI	TGTACA	1 cut(s)	607
BsrI	ACTGG	2 cut(s)	859, 1444
BssAI	RCCGGY	2 cut(s)	360, 1183
BssECI	CCNNGG	3 cut(s)	1399, 1575, 1804
BssMI	GATC	6 cut(s)	458, 664, 799, 1177, 1513, 1789
BssSI	CACGAG	1 cut(s)	1796
BssT1I	CCWWGG	2 cut(s)	1399, 1804
Bst2BI	CACGAG	1 cut(s)	1796
Bst2UI	CCWGG	3 cut(s)	1531, 1843, 1912
Bst4CI	ACNGT	3 cut(s)	1057, 1144, 1649
Bst6I	CTCTTC	3 cut(s)	475, 970, 1619
BstAFI	CTTAAG	1 cut(s)	592
BstAUI	TGTACA	1 cut(s)	607
BstC8I	GCNNGC	6 cut(s)	761, 1302, 1414, 1603, 1642, 1659
BstF5I	GGATG	6 cut(s)	1046, 1177, 1273, 1526, 1580, 1735
BstFNI	CGCG	1 cut(s)	939
BstH2I	RGCGCY	1 cut(s)	918
BstHHI	GCGC	1 cut(s)	917
BstKTI	GATC	6 cut(s)	461, 667, 802, 1180, 1516, 1792
BstMAI	GTCTC	3 cut(s)	270, 800, 1493
BstMBI	GATC	6 cut(s)	458, 664, 799, 1177, 1513, 1789
BstMWI	GCNNNNNNNGC	8 cut(s)	66, 431, 474, 931, 1413, 1418, 1559, 1739
BstNI	CCWGG	3 cut(s)	1531, 1843, 1912
BstNSI	RCATGY	3 cut(s)	748, 763, 813
BstSCI	CCNGG	3 cut(s)	1529, 1841, 1910
BstSFI	CTRYAG	3 cut(s)	120, 1053, 1143
BstUI	CGCG	1 cut(s)	939
BstV1I	GCAGC	7 cut(s)	106, 163, 419, 489, 635, 808, 1863
BstV2I	GAAGAC	1 cut(s)	1701
BstX2I	RGATCY	3 cut(s)	458, 1177, 1513
BstXI	CCANNNNNNTGG	2 cut(s)	1537, 1849
BstYI	RGATCY	3 cut(s)	458, 1177, 1513
BsuRI	GGCC	5 cut(s)	553, 956, 1404, 1661, 1715
BtgZI	GCGATG	1 cut(s)	920
BtrI	CACGTC	2 cut(s)	1429, 1867
BtsCI	GGATG	6 cut(s)	1046, 1177, 1273, 1526, 1580, 1735
BtsI	GCAGTG	2 cut(s)	1299, 1382
BtsIMutI	CAGTG	4 cut(s)	866, 1062, 1299, 1382
Cac8I	GCNNGC	6 cut(s)	761, 1302, 1414, 1603, 1642, 1659
CaiI	CAGNNNCTG	1 cut(s)	176
CciI	TCATGA	1 cut(s)	843
CfoI	GCGC	1 cut(s)	917
Cfr10I	RCCGGY	2 cut(s)	360, 1183
Cfr13I	GGNCC	4 cut(s)	218, 551, 955, 1393
CseI	GACGC	1 cut(s)	672
Csp6I	GTAC	1 cut(s)	608
CspAI	ACCGGT	1 cut(s)	1183
CviQI	GTAC	1 cut(s)	608
DpnI	GATC	6 cut(s)	460, 666, 801, 1179, 1515, 1791
DpnII	GATC	6 cut(s)	458, 664, 799, 1177, 1513, 1789
EaeI	YGGCCR	1 cut(s)	1402
Eam1104I	CTCTTC	3 cut(s)	475, 970, 1619
EarI	CTCTTC	3 cut(s)	475, 970, 1619
Ecl136II	GAGCTC	1 cut(s)	1742
Eco130I	CCWWGG	2 cut(s)	1399, 1804
Eco24I	GRGCYC	1 cut(s)	1744
Eco32I	GATATC	1 cut(s)	1888
Eco47I	GGWCC	2 cut(s)	218, 1393
Eco53kI	GAGCTC	1 cut(s)	1742
Eco57I	CTGAAG	1 cut(s)	1643
EcoICRI	GAGCTC	1 cut(s)	1742
EcoO109I	RGGNCCY	1 cut(s)	1393
EcoRII	CCWGG	3 cut(s)	1529, 1841, 1910
EcoRV	GATATC	1 cut(s)	1888
EcoT14I	CCWWGG	2 cut(s)	1399, 1804
EcoT22I	ATGCAT	2 cut(s)	936, 1006
EcoT38I	GRGCYC	1 cut(s)	1744
ErhI	CCWWGG	2 cut(s)	1399, 1804
FalI	AAGNNNNNCTT	2 cut(s)	786, 818
FaqI	GGGAC	1 cut(s)	483
Fnu4HI	GCNGC	9 cut(s)	120, 177, 408, 478, 624, 822, 1352, 1405, 1877
FokI	GGATG	6 cut(s)	1033, 1184, 1260, 1513, 1567, 1742
FriOI	GRGCYC	1 cut(s)	1744
Fsp4HI	GCNGC	9 cut(s)	120, 177, 408, 478, 624, 822, 1352, 1405, 1877
FspBI	CTAG	5 cut(s)	377, 474, 495, 603, 1673
GlaI	GCGC	1 cut(s)	916
GluI	GCNGC	9 cut(s)	120, 177, 408, 478, 624, 822, 1352, 1405, 1877
GsuI	CTGGAG	2 cut(s)	9, 1704
HaeII	RGCGCY	1 cut(s)	918
HaeIII	GGCC	5 cut(s)	553, 956, 1404, 1661, 1715
HapII	CCGG	4 cut(s)	17, 70, 361, 1184
HgaI	GACGC	1 cut(s)	672
HhaI	GCGC	1 cut(s)	917
Hin6I	GCGC	1 cut(s)	915
HinP1I	GCGC	1 cut(s)	915
HincII	GTYRAC	1 cut(s)	687
HindII	GTYRAC	1 cut(s)	687
HindIII	AAGCTT	3 cut(s)	58, 1414, 1832
HinfI	GANTC	9 cut(s)	299, 514, 585, 694, 715, 1460, 1571, 1613, 1627
HpaII	CCGG	4 cut(s)	17, 70, 361, 1184
HphI	GGTGA	3 cut(s)	276, 1048, 1130
Hpy166II	GTNNAC	7 cut(s)	203, 608, 687, 742, 1219, 1267, 1870
Hpy8I	GTNNAC	7 cut(s)	203, 608, 687, 742, 1219, 1267, 1870
HpyAV	CCTTC	2 cut(s)	841, 1162
HpyCH4III	ACNGT	3 cut(s)	1057, 1144, 1649
HpyCH4IV	ACGT	3 cut(s)	153, 1428, 1866
HpyF10VI	GCNNNNNNNGC	8 cut(s)	66, 431, 474, 931, 1413, 1418, 1559, 1739
HpySE526I	ACGT	3 cut(s)	153, 1428, 1866
HspAI	GCGC	1 cut(s)	915
Kzo9I	GATC	6 cut(s)	458, 664, 799, 1177, 1513, 1789
LguI	GCTCTTC	1 cut(s)	475
LmnI	GCTCC	1 cut(s)	1433
Lsp1109I	GCAGC	7 cut(s)	106, 163, 419, 489, 635, 808, 1863
MaeI	CTAG	5 cut(s)	377, 474, 495, 603, 1673
MaeII	ACGT	3 cut(s)	153, 1428, 1866
MaeIII	GTNAC	6 cut(s)	82, 94, 149, 233, 765, 1036
MalI	GATC	6 cut(s)	460, 666, 801, 1179, 1515, 1791
MboI	GATC	6 cut(s)	458, 664, 799, 1177, 1513, 1789
MflI	RGATCY	3 cut(s)	458, 1177, 1513
MhlI	GDGCHC	2 cut(s)	1382, 1744
MluCI	AATT	8 cut(s)	212, 505, 576, 1307, 1361, 1594, 1663, 1734
MlyI	GAGTC	3 cut(s)	709, 1469, 1636
MmeI	TCCRAC	4 cut(s)	1518, 1641, 1693, 1830
Mph1103I	ATGCAT	2 cut(s)	936, 1006
MroXI	GAANNNNTTC	1 cut(s)	1453
MseI	TTAA	6 cut(s)	56, 365, 593, 639, 1227, 1347
MspA1I	CMGCKG	1 cut(s)	626
MspCI	CTTAAG	1 cut(s)	592
MspI	CCGG	4 cut(s)	17, 70, 361, 1184
MspR9I	CCNGG	3 cut(s)	1531, 1843, 1912
MvaI	CCWGG	3 cut(s)	1531, 1843, 1912
MvnI	CGCG	1 cut(s)	939
MwoI	GCNNNNNNNGC	8 cut(s)	66, 431, 474, 931, 1413, 1418, 1559, 1739
NdeII	GATC	6 cut(s)	458, 664, 799, 1177, 1513, 1789
NlaIV	GGNNCC	4 cut(s)	552, 561, 897, 1314
NmuCI	GTSAC	2 cut(s)	82, 1036
NsiI	ATGCAT	2 cut(s)	936, 1006
NspI	RCATGY	3 cut(s)	748, 763, 813
PaeI	GCATGC	1 cut(s)	763
PagI	TCATGA	1 cut(s)	843
PciI	ACATGT	2 cut(s)	744, 809
PciSI	GCTCTTC	1 cut(s)	475
PdmI	GAANNNNTTC	1 cut(s)	1453
PfeI	GAWTC	6 cut(s)	299, 514, 585, 694, 1571, 1613
PflMI	CCANNNNNTGG	1 cut(s)	1322
PinAI	ACCGGT	1 cut(s)	1183
PkrI	GCNGC	9 cut(s)	121, 178, 409, 479, 625, 823, 1353, 1406, 1878
PleI	GAGTC	3 cut(s)	709, 1468, 1635
PpsI	GAGTC	3 cut(s)	709, 1468, 1635
PpuMI	RGGWCCY	1 cut(s)	1393
PscI	ACATGT	2 cut(s)	744, 809
Psp124BI	GAGCTC	1 cut(s)	1744
Psp5II	RGGWCCY	1 cut(s)	1393
Psp6I	CCWGG	3 cut(s)	1529, 1841, 1910
PspGI	CCWGG	3 cut(s)	1529, 1841, 1910
PspN4I	GGNNCC	4 cut(s)	552, 561, 897, 1314
PspPI	GGNCC	4 cut(s)	218, 551, 955, 1393
PspPPI	RGGWCCY	1 cut(s)	1393
PstI	CTGCAG	1 cut(s)	124
PstNI	CAGNNNCTG	1 cut(s)	176
PsuI	RGATCY	3 cut(s)	458, 1177, 1513
PvuII	CAGCTG	1 cut(s)	626
RsaI	GTAC	1 cut(s)	609
RsaNI	GTAC	1 cut(s)	608
SacI	GAGCTC	1 cut(s)	1744
SapI	GCTCTTC	1 cut(s)	475
SaqAI	TTAA	6 cut(s)	56, 365, 593, 639, 1227, 1347
SatI	GCNGC	9 cut(s)	120, 177, 408, 478, 624, 822, 1352, 1405, 1877
Sau3AI	GATC	6 cut(s)	458, 664, 799, 1177, 1513, 1789
Sau96I	GGNCC	4 cut(s)	218, 551, 955, 1393
SchI	GAGTC	3 cut(s)	709, 1469, 1636
ScrFI	CCNGG	3 cut(s)	1531, 1843, 1912
SduI	GDGCHC	2 cut(s)	1382, 1744
SfcI	CTRYAG	3 cut(s)	120, 1053, 1143
SinI	GGWCC	2 cut(s)	218, 1393
SmlI	CTYRAG	7 cut(s)	592, 728, 781, 803, 890, 1547, 1652
SmoI	CTYRAG	7 cut(s)	592, 728, 781, 803, 890, 1547, 1652
SphI	GCATGC	1 cut(s)	763
Sse9I	AATT	8 cut(s)	212, 505, 576, 1307, 1361, 1594, 1663, 1734
SsiI	CCGC	4 cut(s)	1050, 1351, 1405, 1534
SspMI	CTAG	5 cut(s)	377, 474, 495, 603, 1673
SstI	GAGCTC	1 cut(s)	1744
StyD4I	CCNGG	3 cut(s)	1529, 1841, 1910
StyI	CCWWGG	2 cut(s)	1399, 1804
TaaI	ACNGT	3 cut(s)	1057, 1144, 1649
TaiI	ACGT	3 cut(s)	156, 1431, 1869
TaqI	TCGA	7 cut(s)	64, 197, 268, 316, 798, 1827, 1881
TasI	AATT	8 cut(s)	212, 505, 576, 1307, 1361, 1594, 1663, 1734
TatI	WGTACW	1 cut(s)	607
TauI	GCSGC	2 cut(s)	1354, 1407
TfiI	GAWTC	6 cut(s)	299, 514, 585, 694, 1571, 1613
Tru1I	TTAA	6 cut(s)	56, 365, 593, 639, 1227, 1347
Tru9I	TTAA	6 cut(s)	56, 365, 593, 639, 1227, 1347
TscAI	CASTG	4 cut(s)	866, 1062, 1299, 1382
TseFI	GTSAC	2 cut(s)	82, 1036
TseI	GCWGC	7 cut(s)	119, 176, 407, 477, 623, 821, 1876
Tsp45I	GTSAC	2 cut(s)	82, 1036
TspDTI	ATGAA	8 cut(s)	261, 288, 453, 860, 986, 1035, 1051, 1481
TspRI	CASTG	4 cut(s)	866, 1062, 1299, 1382
Van91I	CCANNNNNTGG	1 cut(s)	1322
Vha464I	CTTAAG	1 cut(s)	592
VpaK11BI	GGWCC	2 cut(s)	218, 1393
XapI	RAATTY	2 cut(s)	1361, 1594
XceI	RCATGY	3 cut(s)	748, 763, 813
XmnI	GAANNNNTTC	1 cut(s)	1453
XspI	CTAG	5 cut(s)	377, 474, 495, 603, 1673
Zsp2I	ATGCAT	2 cut(s)	936, 1006

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.