Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

SuperScaffold_111

Orthogroup ID

OG0004196

Physical Location & Seq

Genomic Coordinates Reverse (-)

1156928 .. 1161836

Gene Structure 4909 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom111g01940.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1992 bp

ATGGATTTGGTCTCTGGTTACAAGGGAGTTGTAGGGCTCGTTTTCGGCAACGAGAAATCGGGTTCTTCTAATGAAGATAGCTATATCGAGCGTTTGCTCGACTGTATAAGCAATGGTAAACTGGCAGAAGACAGGAGGACTGCTATGCTCGAGCTTCAGTCCGTTGTGGCAGAAAGCTCTGCTGCCCAACTAGCATTTGGAGCAATGGGATTCCCTGTTATGATGGGCATATTAAAGGAAGAACGGGATGATGTTGAAATGGTCCGAGGTGCCCTAGAAACTCTTGTAAGTGCCTTGACTCCTATTGACCAAGCAAAAGGACCAAAGAATGAGATTCAACCAGCTATAATGAACACTGATTTGCTTTCCAGAGAAGCAGACAGCATTTCACTTCTTCTAAGTTTGTTGTCAGAGGAGGATTTCTATGTACGATATTACACTCTTCAACTTTTGACAGCTCTTCTGACAAATTCTCGAAATAGGTTACAGGAAGCCATTCTGACCATACCTCGTGGTATAACTCGCTTAATGGATATGCTTATGGATCGTGAGGTTATACGAAATGAGGCCTTATTACTTCTTACTTATTTGACTCGCGAAGCTGAGGAAATTCAAAAAATTGTGGTCTTTGAAGGTGCTTTTGAAAAGATATTCAGCATCATCAAAGAGGAAGGTGGTTCGGATGGTGGTGTTGTTGTGCAGGACTGTATTGAATTGTTGAACAATCTTATTCGGAACACTGCATCGAATCAGATACTGCTGAGGGAGACAATGGGATTTGACCCCTTAATGTCAATTTTGAAGCTACGAGGGAGTACTTACAGTTTCACTCAACAAAAGACAATTAATCTACTCAGTGCGTTGGAAACTGTTAATTTGCTAATAATGGGAGGCTCGGAGGCTGATCCTGGAAAAGATGCAAATAAGCTAACAAATAGAACCACCCTCGCTCAGAAAAAAGTATTGGACCATCTTCTAATGCTGGGTGTGGAAAGCCAGTGGGCACCTGTTGCTGTTCGTTGTTCAGCACTGCGATGCATTGGTAATCTGATTGCTGGACATCCCAAGAATCTTGATGCGCTTGCAAGCAAATTTCTTGGAGAGGGGCCTCAGGAACCTGCTTTGAACTCAATTCTTCGAATCATTTTGCGGACATCCAGTATACAAGAATTTGTTGCAGCAGATTATGTTTTTAAGAGCTTTTGTGAGAATAATGCTGATGGCCAAACTATGTTAGCGTCTACATTGATTCCGCAACCGCATTCCATGATTCATGCACCTGTTGAAGAGGATGTGAACATGTCCTTTGGAAGCATGCTATTACAAGGTCTTAACTTCAGCGAGAAAGATGGCGATCTTGAGACATGCTGCAGAGCTGCTAGTGTTCTTTCTCATATAATGAAGGACAATCTGCAGTGCAAGGAAAGGGTATTGCGTATTGAACTTGAGGCACCTACTCCATCTCTAGGTGCTCCAGAGCCTCTAATGCACCGTGTGGTAAAATACTTGGCCGTTGCCTCTTCCATGCAAAACAAAGATGGAAAGTCAAGCGGAAACTCATATGTTCAACCAGTTATCCTGAAATTGCTGGTCACTTGGCTAGCTGATTGCCCTAATGCAGTGAATTGCTTCCTAGATTCACGTCCCCACATCACTTATCTGCTTGAGTTGGTATCCAATTCAATTGCTACAGTGTACATAAAGGGGTTGGCAGCTGTTCTTCTTGGAGAGTGTGTGATCTACAACAAATCAGTTGAAAGTGGGAAGGACGCCTTTGCTATAGTTGATTCCATAAGCCAGAAAGTTGGGCTCACGTCATATTTTCTGAAGTTCGAGGAGATGCAGAAAAGCTTCCTTTTCACCCCTTCAACATCAGCTCAGCCGCACAAACAATTAACCAGATCCGCCTCAGCTAGTATGGTAGATGTTGATGAGAGCAATCTCTCTGATCAGAAAAATGAGCGATCATCCGGTTCTCTCCTCAATCTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005794 GO:0005795 GO:0005798 GO:0005829 GO:0006810 GO:0006886 GO:0006888 GO:0007275 GO:0008104 GO:0008150 GO:0008565 GO:0009791 GO:0009987 GO:0012505 GO:0012506 GO:0012507 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0016192 GO:0022406 GO:0030133 GO:0030134 GO:0030135 GO:0030658 GO:0030659 GO:0030660 GO:0030662 GO:0031090 GO:0031410 GO:0031982 GO:0031984 GO:0032501 GO:0032502 GO:0032527 GO:0033036 GO:0034613 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044433 GO:0044444 GO:0044446 GO:0044464 GO:0045056 GO:0045184 GO:0046907 GO:0048193 GO:0048211 GO:0048278 GO:0048856 GO:0051179 GO:0051234 GO:0051640 GO:0051641 GO:0051649 GO:0061024 GO:0061025 GO:0070727 GO:0071702 GO:0071705 GO:0071840 GO:0097708 GO:0098588 GO:0098791 GO:0098805 GO:0140056

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Uso1_p115_C Uso1_p115_head

Protein Analysis

664

Amino Acids

72.79

Weight (kDa)

5.08

Isoelectric Point (pI)

38.72

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004196)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G27530
fragaria_vesca	FvH4_1g06690 FvH4_1g06690 FvH4_6g51710 FvH4_6g51710 FvH4_6g51710 FvH4_6g51710
malus_domestica	MD09G1023300.v1.1 MD17G1022800.v1.1
prunus_persica	Prupe.3G293500_v2.0.a1 Prupe.3G293600_v2.0.a1
pyrus_communis	pycom111g01940
rosa_chinensis	RchiOBHm_Chr2g0173241 RchiOBHm_Chr2g0173251
rosa_laevigata	RLG00000022173 RLG00000022175
rosa_multiflora	Rmu_sc0010961.1_g000008 Rmu_sc0010961.1_g000011
rosa_roxburghii	Rroxscaffold_2G00079090
rosa_rugosa	Rorug02G0566800 Rorug02G0566900 Rorug02G0566900 Rorug02G0566900
rosa_samantha	Rh2AG646700 Rh2BG657400 Rh2CG622600 Rh2CG623100 Rh2CG623200 Rh2DG671000 Rh2DG671500 Rh2DG671600
rosa_wichuraiana	Rw2G053120 Rw2G053130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1126
AccB1I	GGYRCC	3 cut(s)	269, 1003, 1450
AccI	GTMKAC	2 cut(s)	1162, 1241
AccII	CGCG	1 cut(s)	597
AciI	CCGC	6 cut(s)	1150, 1253, 1259, 1551, 1883, 1905
AclWI	GGATC	3 cut(s)	552, 899, 1896
AcoI	YGGCCR	2 cut(s)	1222, 1509
AcsI	RAATTY	4 cut(s)	469, 609, 1091, 1169
AcuI	CTGAAG	3 cut(s)	140, 1321, 1847
AcyI	GRCGYC	1 cut(s)	1770
AdeI	CACNNNGTG	1 cut(s)	1495
AfaI	GTAC	3 cut(s)	429, 817, 1697
AfiI	CCNNNNNNNGG	1 cut(s)	1466
AflIII	ACRYGT	1 cut(s)	1299
AjiI	CACGTC	2 cut(s)	1643, 1815
AjnI	CCWGG	1 cut(s)	907
AjuI	GAANNNNNNNTTGG	2 cut(s)	947, 979
Alw21I	GWGCWC	1 cut(s)	1474
Alw26I	GTCTC	3 cut(s)	16, 761, 1355
AlwI	GGATC	3 cut(s)	552, 899, 1896
AlwNI	CAGNNNCTG	1 cut(s)	757
Ama87I	CYCGRG	1 cut(s)	149
AoxI	GGCC	4 cut(s)	567, 1106, 1222, 1509
ApeKI	GCWGC	5 cut(s)	182, 1178, 1368, 1376, 1712
ApoI	RAATTY	4 cut(s)	469, 609, 1091, 1169
AseI	ATTAAT	1 cut(s)	846
Asp700I	GAANNNNTTC	3 cut(s)	495, 1628, 1850
AspLEI	GCGC	1 cut(s)	1081
AspS9I	GGNCC	4 cut(s)	262, 320, 967, 1106
AsuHPI	GGTGA	1 cut(s)	1852
AsuII	TTCGAA	1 cut(s)	1138
AsuNHI	GCTAGC	1 cut(s)	1600
AvaI	CYCGRG	1 cut(s)	149
AvaII	GGWCC	3 cut(s)	262, 320, 967
AxyI	CCTNAGG	1 cut(s)	1110
BaeGI	GKGCMC	2 cut(s)	274, 1006
BalI	TGGCCA	1 cut(s)	1224
BanI	GGYRCC	3 cut(s)	269, 1003, 1450
BanII	GRGCYC	2 cut(s)	39, 1812
BauI	CACGAG	1 cut(s)	510
BbsI	GAAGAC	1 cut(s)	135
Bbv12I	GWGCWC	1 cut(s)	1474
BbvCI	CCTCAGC	3 cut(s)	603, 761, 1909
BbvI	GCAGC	5 cut(s)	169, 1190, 1355, 1363, 1724
BccI	CCATC	7 cut(s)	217, 677, 978, 1214, 1343, 1468, 1532
BceAI	ACGGC	1 cut(s)	1496
BciT130I	CCWGG	1 cut(s)	909
BciVI	GTATCC	1 cut(s)	1684
BclI	TGATCA	1 cut(s)	1948
BcoDI	GTCTC	3 cut(s)	16, 761, 1355
BfaI	CTAG	7 cut(s)	191, 275, 1380, 1466, 1601, 1634, 1914
BfmI	CTRYAG	4 cut(s)	1369, 1412, 1689, 1779
BfuAI	ACCTGC	1 cut(s)	1126
BfuI	GTATCC	1 cut(s)	1684
BisI	GCNGC	6 cut(s)	183, 1179, 1369, 1377, 1713, 1883
BlpI	GCTNAGC	1 cut(s)	1878
BlsI	GCNGC	6 cut(s)	184, 1180, 1370, 1378, 1714, 1884
BmcAI	AGTACT	1 cut(s)	817
Bme1390I	CCNGG	1 cut(s)	909
Bme18I	GGWCC	3 cut(s)	262, 320, 967
BmeT110I	CYCGRG	1 cut(s)	149
BmgBI	CACGTC	2 cut(s)	1643, 1815
BmgT120I	GGNCC	4 cut(s)	262, 320, 967, 1106
BmiI	GGNNCC	5 cut(s)	271, 1005, 1107, 1116, 1452
BmrFI	CCNGG	1 cut(s)	909
BmsI	GCATC	6 cut(s)	666, 752, 907, 1025, 1066, 1830
BmtI	GCTAGC	1 cut(s)	1604
BpiI	GAAGAC	1 cut(s)	135
BpmI	CTGGAG	1 cut(s)	1458
Bpu10I	CCTNAGC	3 cut(s)	603, 761, 1909
Bpu1102I	GCTNAGC	1 cut(s)	1878
Bpu14I	TTCGAA	1 cut(s)	1138
BpuEI	CTTGAG	3 cut(s)	1379, 1466, 1685
BsaBI	GATNNNNATC	1 cut(s)	1353
BsaHI	GRCGYC	1 cut(s)	1770
BsaI	GGTCTC	1 cut(s)	16
BsaJI	CCNNGG	1 cut(s)	265
BsaWI	WCCGGW	1 cut(s)	1970
BsaXI	ACNNNNNCTCC	2 cut(s)	1719, 1749
Bsc4I	CCNNNNNNNGG	1 cut(s)	1466
Bse1I	ACTGG	4 cut(s)	126, 997, 1158, 1571
Bse21I	CCTNAGG	1 cut(s)	1110
Bse3DI	GCAATG	2 cut(s)	118, 210
Bse8I	GATNNNNATC	1 cut(s)	1353
BseBI	CCWGG	1 cut(s)	909
BseDI	CCNNGG	1 cut(s)	265
BseGI	GGATG	6 cut(s)	253, 688, 1060, 1154, 1297, 1967
BseJI	GATNNNNATC	1 cut(s)	1353
BseLI	CCNNNNNNNGG	1 cut(s)	1466
BseMI	GCAATG	2 cut(s)	118, 210
BseMII	CTCAG	7 cut(s)	594, 752, 868, 965, 1124, 1892, 1923
BseNI	ACTGG	4 cut(s)	126, 997, 1158, 1571
BseRI	GAGGAG	3 cut(s)	428, 1850, 1970
BseSI	GKGCMC	2 cut(s)	274, 1006
BseXI	GCAGC	5 cut(s)	169, 1190, 1355, 1363, 1724
BseYI	CCCAGC	1 cut(s)	982
BsgI	GTGCAG	1 cut(s)	719
Bsh1236I	CGCG	1 cut(s)	597
BshFI	GGCC	4 cut(s)	569, 1108, 1224, 1511
BshNI	GGYRCC	3 cut(s)	269, 1003, 1450
BsiHKAI	GWGCWC	1 cut(s)	1474
BsiHKCI	CYCGRG	1 cut(s)	149
BsiSI	CCGG	1 cut(s)	1971
BslFI	GGGAC	1 cut(s)	1629
BslI	CCNNNNNNNGG	1 cut(s)	1466
BsmAI	GTCTC	3 cut(s)	16, 761, 1355
BsmFI	GGGAC	1 cut(s)	1629
BsmI	GAATGC	1 cut(s)	1261
BsnI	GGCC	4 cut(s)	569, 1108, 1224, 1511
Bso31I	GGTCTC	1 cut(s)	16
BsoBI	CYCGRG	1 cut(s)	149
Bsp119I	TTCGAA	1 cut(s)	1138
Bsp1286I	GDGCHC	5 cut(s)	39, 274, 1006, 1474, 1812
Bsp1407I	TGTACA	1 cut(s)	1695
Bsp143I	GATC	7 cut(s)	544, 904, 1354, 1737, 1901, 1948, 1964
Bsp1720I	GCTNAGC	1 cut(s)	1878
Bsp68I	TCGCGA	1 cut(s)	597
BspACI	CCGC	6 cut(s)	1150, 1253, 1259, 1551, 1883, 1905
BspANI	GGCC	4 cut(s)	569, 1108, 1224, 1511
BspCNI	CTCAG	7 cut(s)	595, 753, 867, 964, 1123, 1891, 1922
BspFNI	CGCG	1 cut(s)	597
BspLI	GGNNCC	5 cut(s)	271, 1005, 1107, 1116, 1452
BspMAI	CTGCAG	2 cut(s)	1373, 1416
BspMI	ACCTGC	1 cut(s)	1126
BspOI	GCTAGC	1 cut(s)	1604
BspPI	GGATC	3 cut(s)	552, 899, 1896
BspQI	GCTCTTC	1 cut(s)	465
BspT104I	TTCGAA	1 cut(s)	1138
BspT107I	GGYRCC	3 cut(s)	269, 1003, 1450
BspTNI	GGTCTC	1 cut(s)	16
BsrDI	GCAATG	2 cut(s)	118, 210
BsrGI	TGTACA	1 cut(s)	1695
BsrI	ACTGG	4 cut(s)	126, 997, 1158, 1571
BssECI	CCNNGG	1 cut(s)	265
BssMI	GATC	7 cut(s)	544, 904, 1354, 1737, 1901, 1948, 1964
BssNAI	GTATAC	1 cut(s)	1163
BssNI	GRCGYC	1 cut(s)	1770
BssSI	CACGAG	1 cut(s)	510
Bst1107I	GTATAC	1 cut(s)	1163
Bst2BI	CACGAG	1 cut(s)	510
Bst2UI	CCWGG	1 cut(s)	909
Bst4CI	ACNGT	6 cut(s)	104, 707, 824, 871, 1493, 1693
Bst6I	CTCTTC	4 cut(s)	447, 465, 1281, 1525
BstACI	GRCGYC	1 cut(s)	1770
BstAPI	GCANNNNNTGC	1 cut(s)	1010
BstAUI	TGTACA	1 cut(s)	1695
BstBI	TTCGAA	1 cut(s)	1138
BstC8I	GCNNGC	4 cut(s)	1083, 1087, 1316, 1602
BstDEI	CTNAG	8 cut(s)	398, 603, 761, 854, 951, 1110, 1878, 1909
BstF5I	GGATG	6 cut(s)	253, 688, 1060, 1154, 1297, 1967
BstFNI	CGCG	1 cut(s)	597
BstHHI	GCGC	1 cut(s)	1081
BstKTI	GATC	7 cut(s)	547, 907, 1357, 1740, 1904, 1951, 1967
BstMAI	GTCTC	3 cut(s)	16, 761, 1355
BstMBI	GATC	7 cut(s)	544, 904, 1354, 1737, 1901, 1948, 1964
BstMWI	GCNNNNNNNGC	4 cut(s)	191, 200, 1010, 1486
BstNI	CCWGG	1 cut(s)	909
BstNSI	RCATGY	3 cut(s)	1303, 1318, 1368
BstSCI	CCNGG	1 cut(s)	907
BstSFI	CTRYAG	4 cut(s)	1369, 1412, 1689, 1779
BstSLI	GKGCMC	2 cut(s)	274, 1006
BstUI	CGCG	1 cut(s)	597
BstV1I	GCAGC	5 cut(s)	169, 1190, 1355, 1363, 1724
BstV2I	GAAGAC	1 cut(s)	135
BstX2I	RGATCY	1 cut(s)	1901
BstXI	CCANNNNNNTGG	1 cut(s)	1805
BstYI	RGATCY	1 cut(s)	1901
BstZ17I	GTATAC	1 cut(s)	1163
Bsu36I	CCTNAGG	1 cut(s)	1110
BsuI	GTATCC	1 cut(s)	1684
BsuRI	GGCC	4 cut(s)	569, 1108, 1224, 1511
BtgZI	GCGATG	1 cut(s)	1048
BtrI	CACGTC	2 cut(s)	1643, 1815
BtsCI	GGATG	6 cut(s)	253, 688, 1060, 1154, 1297, 1967
BtsI	GCAGTG	4 cut(s)	738, 1028, 1421, 1626
BtsIMutI	CAGTG	8 cut(s)	354, 738, 862, 1004, 1028, 1421, 1626, 1698
BtuMI	TCGCGA	1 cut(s)	597
BveI	ACCTGC	1 cut(s)	1126
Cac8I	GCNNGC	4 cut(s)	1083, 1087, 1316, 1602
CaiI	CAGNNNCTG	1 cut(s)	757
CfoI	GCGC	1 cut(s)	1081
Cfr13I	GGNCC	4 cut(s)	262, 320, 967, 1106
CseI	GACGC	2 cut(s)	1227, 1778
Csp6I	GTAC	3 cut(s)	428, 816, 1696
CviAII	CATG	6 cut(s)	1267, 1274, 1300, 1315, 1365, 1525
CviQI	GTAC	3 cut(s)	428, 816, 1696
DdeI	CTNAG	8 cut(s)	398, 603, 761, 854, 951, 1110, 1878, 1909
DpnI	GATC	7 cut(s)	546, 906, 1356, 1739, 1903, 1950, 1966
DpnII	GATC	7 cut(s)	544, 904, 1354, 1737, 1901, 1948, 1964
DraIII	CACNNNGTG	1 cut(s)	1495
EaeI	YGGCCR	2 cut(s)	1222, 1509
Eam1104I	CTCTTC	4 cut(s)	447, 465, 1281, 1525
EarI	CTCTTC	4 cut(s)	447, 465, 1281, 1525
EciI	GGCGGA	1 cut(s)	1894
Eco147I	AGGCCT	1 cut(s)	569
Eco24I	GRGCYC	2 cut(s)	39, 1812
Eco31I	GGTCTC	1 cut(s)	16
Eco47I	GGWCC	3 cut(s)	262, 320, 967
Eco57I	CTGAAG	3 cut(s)	140, 1321, 1847
Eco81I	CCTNAGG	1 cut(s)	1110
Eco88I	CYCGRG	1 cut(s)	149
EcoO109I	RGGNCCY	1 cut(s)	1106
EcoRII	CCWGG	1 cut(s)	907
EcoT22I	ATGCAT	1 cut(s)	1040
EcoT38I	GRGCYC	2 cut(s)	39, 1812
FaeI	CATG	6 cut(s)	1270, 1277, 1303, 1318, 1368, 1528
FalI	AAGNNNNNCTT	2 cut(s)	1757, 1789
FaqI	GGGAC	1 cut(s)	1629
FatI	CATG	6 cut(s)	1266, 1273, 1299, 1314, 1364, 1524
FauNDI	CATATG	1 cut(s)	1561
FbaI	TGATCA	1 cut(s)	1948
FblI	GTMKAC	2 cut(s)	1162, 1241
Fnu4HI	GCNGC	6 cut(s)	183, 1179, 1369, 1377, 1713, 1883
FokI	GGATG	6 cut(s)	260, 695, 1047, 1141, 1304, 1954
FriOI	GRGCYC	2 cut(s)	39, 1812
Fsp4HI	GCNGC	6 cut(s)	183, 1179, 1369, 1377, 1713, 1883
FspBI	CTAG	7 cut(s)	191, 275, 1380, 1466, 1601, 1634, 1914
GlaI	GCGC	1 cut(s)	1080
GluI	GCNGC	6 cut(s)	183, 1179, 1369, 1377, 1713, 1883
GsaI	CCCAGC	1 cut(s)	986
GsuI	CTGGAG	1 cut(s)	1458
HaeIII	GGCC	4 cut(s)	569, 1108, 1224, 1511
HapII	CCGG	1 cut(s)	1971
HgaI	GACGC	2 cut(s)	1227, 1778
HhaI	GCGC	1 cut(s)	1081
Hin1I	GRCGYC	1 cut(s)	1770
Hin1II	CATG	6 cut(s)	1270, 1277, 1303, 1318, 1368, 1528
Hin6I	GCGC	1 cut(s)	1079
HinP1I	GCGC	1 cut(s)	1079
HindIII	AAGCTT	1 cut(s)	1849
HpaII	CCGG	1 cut(s)	1971
HphI	GGTGA	1 cut(s)	1852
Hpy166II	GTNNAC	5 cut(s)	119, 1163, 1242, 1297, 1696
Hpy188III	TCNNGA	9 cut(s)	369, 474, 548, 596, 1073, 1112, 1358, 1475, 1579
Hpy8I	GTNNAC	5 cut(s)	119, 1163, 1242, 1297, 1696
HpyAV	CCTTC	5 cut(s)	626, 665, 1396, 1759, 1875
HpyCH4III	ACNGT	6 cut(s)	104, 707, 824, 871, 1493, 1693
HpyCH4IV	ACGT	2 cut(s)	1642, 1814
HpyF10VI	GCNNNNNNNGC	4 cut(s)	191, 200, 1010, 1486
HpyF3I	CTNAG	8 cut(s)	398, 603, 761, 854, 951, 1110, 1878, 1909
HpySE526I	ACGT	2 cut(s)	1642, 1814
Hsp92I	GRCGYC	1 cut(s)	1770
Hsp92II	CATG	6 cut(s)	1270, 1277, 1303, 1318, 1368, 1528
HspAI	GCGC	1 cut(s)	1079
Ksp22I	TGATCA	1 cut(s)	1948
Kzo9I	GATC	7 cut(s)	544, 904, 1354, 1737, 1901, 1948, 1964
LguI	GCTCTTC	1 cut(s)	465
LmnI	GCTCC	2 cut(s)	200, 1477
Lsp1109I	GCAGC	5 cut(s)	169, 1190, 1355, 1363, 1724
LweI	GCATC	6 cut(s)	666, 752, 907, 1025, 1066, 1830
MaeI	CTAG	7 cut(s)	191, 275, 1380, 1466, 1601, 1634, 1914
MaeII	ACGT	2 cut(s)	1642, 1814
MaeIII	GTNAC	3 cut(s)	17, 483, 1591
MalI	GATC	7 cut(s)	546, 906, 1356, 1739, 1903, 1950, 1966
MboI	GATC	7 cut(s)	544, 904, 1354, 1737, 1901, 1948, 1964
MfeI	CAATTG	1 cut(s)	1683
MflI	RGATCY	1 cut(s)	1901
MhlI	GDGCHC	5 cut(s)	39, 274, 1006, 1474, 1812
MlsI	TGGCCA	1 cut(s)	1224
MluNI	TGGCCA	1 cut(s)	1224
MlyI	GAGTC	2 cut(s)	292, 586
MmeI	TCCRAC	1 cut(s)	843
Mox20I	TGGCCA	1 cut(s)	1224
Mph1103I	ATGCAT	1 cut(s)	1040
MroXI	GAANNNNTTC	3 cut(s)	495, 1628, 1850
MscI	TGGCCA	1 cut(s)	1224
MseI	TTAA	8 cut(s)	233, 527, 788, 846, 873, 1194, 1332, 1895
MslI	CAYNNNNRTG	1 cut(s)	1033
Msp20I	TGGCCA	1 cut(s)	1224
MspA1I	CMGCKG	1 cut(s)	1715
MspI	CCGG	1 cut(s)	1971
MspR9I	CCNGG	1 cut(s)	909
MunI	CAATTG	1 cut(s)	1683
Mva1269I	GAATGC	1 cut(s)	1261
MvaI	CCWGG	1 cut(s)	909
MvnI	CGCG	1 cut(s)	597
MwoI	GCNNNNNNNGC	4 cut(s)	191, 200, 1010, 1486
NdeI	CATATG	1 cut(s)	1561
NdeII	GATC	7 cut(s)	544, 904, 1354, 1737, 1901, 1948, 1964
NheI	GCTAGC	1 cut(s)	1600
NlaIII	CATG	6 cut(s)	1270, 1277, 1303, 1318, 1368, 1528
NlaIV	GGNNCC	5 cut(s)	271, 1005, 1107, 1116, 1452
NmuCI	GTSAC	1 cut(s)	1591
NruI	TCGCGA	1 cut(s)	597
NsiI	ATGCAT	1 cut(s)	1040
NspI	RCATGY	3 cut(s)	1303, 1318, 1368
NspV	TTCGAA	1 cut(s)	1138
PaeI	GCATGC	1 cut(s)	1318
PaeR7I	CTCGAG	1 cut(s)	149
PceI	AGGCCT	1 cut(s)	569
PciI	ACATGT	1 cut(s)	1299
PciSI	GCTCTTC	1 cut(s)	465
PctI	GAATGC	1 cut(s)	1261
PdmI	GAANNNNTTC	3 cut(s)	495, 1628, 1850
PfeI	GAWTC	9 cut(s)	210, 334, 748, 1069, 1140, 1249, 1270, 1637, 1787
PfoI	TCCNGGA	1 cut(s)	907
PkrI	GCNGC	6 cut(s)	184, 1180, 1370, 1378, 1714, 1884
PleI	GAGTC	2 cut(s)	292, 586
PpsI	GAGTC	2 cut(s)	292, 586
PscI	ACATGT	1 cut(s)	1299
PshBI	ATTAAT	1 cut(s)	846
Psp6I	CCWGG	1 cut(s)	907
PspFI	CCCAGC	1 cut(s)	982
PspGI	CCWGG	1 cut(s)	907
PspN4I	GGNNCC	5 cut(s)	271, 1005, 1107, 1116, 1452
PspPI	GGNCC	4 cut(s)	262, 320, 967, 1106
PspXI	VCTCGAGB	1 cut(s)	149
PstI	CTGCAG	2 cut(s)	1373, 1416
PstNI	CAGNNNCTG	1 cut(s)	757
PsuI	RGATCY	1 cut(s)	1901
PvuII	CAGCTG	1 cut(s)	1715
RruI	TCGCGA	1 cut(s)	597
RsaI	GTAC	3 cut(s)	429, 817, 1697
RsaNI	GTAC	3 cut(s)	428, 816, 1696
RseI	CAYNNNNRTG	1 cut(s)	1033
SapI	GCTCTTC	1 cut(s)	465
SaqAI	TTAA	8 cut(s)	233, 527, 788, 846, 873, 1194, 1332, 1895
SatI	GCNGC	6 cut(s)	183, 1179, 1369, 1377, 1713, 1883
Sau3AI	GATC	7 cut(s)	544, 904, 1354, 1737, 1901, 1948, 1964
Sau96I	GGNCC	4 cut(s)	262, 320, 967, 1106
ScaI	AGTACT	1 cut(s)	817
SchI	GAGTC	2 cut(s)	292, 586
ScrFI	CCNGG	1 cut(s)	909
SduI	GDGCHC	5 cut(s)	39, 274, 1006, 1474, 1812
SfaNI	GCATC	6 cut(s)	666, 752, 907, 1025, 1066, 1830
SfcI	CTRYAG	4 cut(s)	1369, 1412, 1689, 1779
Sfr274I	CTCGAG	1 cut(s)	149
SfuI	TTCGAA	1 cut(s)	1138
SinI	GGWCC	3 cut(s)	262, 320, 967
SlaI	CTCGAG	1 cut(s)	149
SmiMI	CAYNNNNRTG	1 cut(s)	1033
SmlI	CTYRAG	4 cut(s)	149, 1358, 1445, 1664
SmoI	CTYRAG	4 cut(s)	149, 1358, 1445, 1664
SphI	GCATGC	1 cut(s)	1318
SseBI	AGGCCT	1 cut(s)	569
SsiI	CCGC	6 cut(s)	1150, 1253, 1259, 1551, 1883, 1905
SspMI	CTAG	7 cut(s)	191, 275, 1380, 1466, 1601, 1634, 1914
StuI	AGGCCT	1 cut(s)	569
StyD4I	CCNGG	1 cut(s)	907
TaaI	ACNGT	6 cut(s)	104, 707, 824, 871, 1493, 1693
TaiI	ACGT	2 cut(s)	1645, 1817
TaqI	TCGA	7 cut(s)	87, 99, 150, 475, 746, 1138, 1833
TatI	WGTACW	2 cut(s)	815, 1695
TauI	GCSGC	1 cut(s)	1885
TfiI	GAWTC	9 cut(s)	210, 334, 748, 1069, 1140, 1249, 1270, 1637, 1787
Tru1I	TTAA	8 cut(s)	233, 527, 788, 846, 873, 1194, 1332, 1895
Tru9I	TTAA	8 cut(s)	233, 527, 788, 846, 873, 1194, 1332, 1895
TscAI	CASTG	8 cut(s)	361, 745, 862, 1004, 1035, 1421, 1626, 1698
TseFI	GTSAC	1 cut(s)	1591
TseI	GCWGC	5 cut(s)	182, 1178, 1368, 1376, 1712
Tsp45I	GTSAC	1 cut(s)	1591
TspDTI	ATGAA	4 cut(s)	87, 365, 1262, 1415
TspGWI	ACGGA	1 cut(s)	151
TspRI	CASTG	8 cut(s)	361, 745, 862, 1004, 1035, 1421, 1626, 1698
VpaK11BI	GGWCC	3 cut(s)	262, 320, 967
VspI	ATTAAT	1 cut(s)	846
XapI	RAATTY	4 cut(s)	469, 609, 1091, 1169
XceI	RCATGY	3 cut(s)	1303, 1318, 1368
XcmI	CCANNNNNNNNNTGG	1 cut(s)	194
XhoI	CTCGAG	1 cut(s)	149
XmiI	GTMKAC	2 cut(s)	1162, 1241
XmnI	GAANNNNTTC	3 cut(s)	495, 1628, 1850
XspI	CTAG	7 cut(s)	191, 275, 1380, 1466, 1601, 1634, 1914
ZrmI	AGTACT	1 cut(s)	817
Zsp2I	ATGCAT	1 cut(s)	1040

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.