FvH4_6g53940

exocyst complex component

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
Physical Location & Seq
Reverse (-)
39463750 .. 39466143
2394 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g53940.t1

Sequence Viewer

Length: 2394 bp
ATGGAGAAGGATGAGGCTCCGACCAAGACCCCTAAGGCATCAGGGACTCCCAAGGCTTTAGGGACACCCAAGGCACCAGAGTCCCCTGCAAAGAATGATGGAAATCCAATAGAAGATCAAAAGGAAGAAGGAGACAGTGCTGATCAGAAAGAGAAAGATAAGGACGTTACCGATGGTGGTGATGAAGAAGACAGCACTCCACTTGAGCCGGTTGAGATTCCGGATCCCCATCCCACCCTCGACAAGCTTTCTGAAGACATTGATCGGTGTATCTCTACATTGTCTAGACCTAGCGAGAAAGATGAGAGCCAACAAGAGGAGAAGGATAATGCAAATAATGAGGCGAAAGATGCAAAAGGTGGTGATGAGAAGGATGAGAAACATGACAAGGAAGAAGAGAAAGTAACAGATGACAAGGTTGAAAAGGAAGAAGAGAAGGGTGAGAATCAAGATGTAAAAGAAGGTGAAAAGAATGACAAAGATGAGATTAAGGACGATGAGAAGGATGAGAAAGAATTAGGTGATGAAAAGAAAGATGAGAAAGAGACTGAAGAAGCTGAGTATTGCGTCATCGAAAAAGAAAAGGATCTAGTTCCAGAGGAGCTCATTAAGCTTATTGAAAAGTTCTTGAATTGGGTAGATGATATCTGTTGCGAAGGAAGATGCAGGTGGGGTACGGTGCCCGCTGACGACGAGTCGTTTATGGACGCTGTGGATCGGATGGCCAAGCTGAGGGAGTCTCTCTTGTCCGTCTGTTCTATGGGATTGAAGTTTCAAGAAAGGCACGGTGGTTTGATCAACCGCCTAAGTGGCATTCAGCACCGAGCCATGGCGTATCTGGAAGAAGAATTCCGAGTCCTTCTAGAAGAATCCAAAACCGAGGCTGATCAGCACACCACAGCAGCTGATCACAAAGACAACACCAGTGGTACCAAGGGAAAGAACGATCAAGACTCAGTGCCGGAATCCGAGCCGGAAACTCAAGTTGGTGTCGAATATCCTGGTTATCCTCAGGAGGCTGTGTCCAATCTGAATAAAATAGCCAAGAAGATGATCTTTGCCGGATACGAATTCGAGTGCTGCGAGGTTTACATCATTTCAAGGAGGCATGCATTCGATGAAAACCTCCACAGGCTTGGCCTAGAGAAGCACAGCATCGACGACGTGCAGAAGATGCACTGGGAGTCTCTGGAGAGAGAGATCGTGTCGTGGGTCAAGGCATTGAAGCAATGCGTGGCGTTCTACTTTTCCGGCGAACGGAAGCTGGCCGAGTCTGTGTTTTCCGAGCACCCGGAAATTTCGTCGTGCCTGTTCAGCAATCTGAGCAGAGGAGTGATGATACAGCTCCTGAATTTCGCCGAAGGAATCGCGATGGCGAAAAGAGCGGCGGAGAAGCTGTTCAAGACGCTCGACATGTACGAGGCCGTGAAGGGAGTGGTCCCCAAAATGGACGAGCTTTTTCCGGAGGCATGCGTCAACGATCTCAAGACGGAGACCACGACGGTTCTGGCGCGGCTGGGGGAAGCCGCGATTTGTATATTCTGTGATTTGGAGAATTCAATCAAGGCGGAAACGGGTCGGAACCCGGTACCGGGAGGGGCGGTGCACCCGTTGACCCGGTACACGATGAACTACCTTCGATATGCGTGCGAGTACAAGCACACGCTGGAGCTGGTGTTTAAGGAGCACGCCAAGATCGAGCGGACCGACTCGACGAGCAAAAGTCGCGACGAGTACGACGCGAGCGACACGTCGTACGCGGTGGCCGACGACGAGTCGCCGTTCGCGGTGCAACTGGCGCGGGTGATGGCTTTGCTGGACTCGAACCTGGAGGCAAAGTCGAAGCTGTACAAGGACGTGGCGTTGAGCTCGATATTCATGATGAACAACGGACGTTACATCATGCAGAAGATCAAGGGCTCTCCCGAGATCAACGCATGCATGGGCGACACGTGGTGCCGGAAGAGGTCGTCGGAGCTGAGGCAGTACCACAAGAACTACCAGAGAGAGACGTGGAGCCGGCTGCTGAGTTTCCTGAGCCACGAGGGGCTTAGCAACCATGGGAAAGTGCAGAAGCCGGTGCTGAAAGAGAGGTTCAAGAGCTTCAATGCTATGTTTGATGAGATACACAAGACGCAGAGCACGTGGGTGGTGAGTGACGAGCAGCTTCAGTCGGAGCTTAGGGTTTCGATATCGGCGGTGGTGATTCCGGCGTACAGATCCTTCTTGGGGAGATTCGCGCAGGTGTTGGACCCGGGAAGGCAAACAGAGAAGTACGTAAAGTTTCAGCCGGATGACATAGAGACGTACATTGATGAGCTATTTGATGGCAACCCTGCCCAGATTGCCAACCCTAATTCCAATTCCTCCATATTTAATAGGAGAAGACCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

798

Amino Acids

90.58

Weight (kDa)

4.89

Isoelectric Point (pI)

45.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Exo70_N PF20669 230 - 290 1.5e-06 Exocyst complex component Exo70 N-terminal
Exo70_C PF03081 403 - 773 1.7e-124 Exo70 exocyst complex subunit C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 657, 2233
Acc36I ACCTGC 2 cut(s) 657, 2233
Acc65I GGTACC 2 cut(s) 929, 1588
AccB1I GGYRCC 5 cut(s) 73, 679, 929, 1588, 1956
AccBSI CCGCTC 2 cut(s) 1385, 1702
AccII CGCG 9 cut(s) 1370, 1513, 1529, 1728, 1742, 1760, 1787, 1801, 2240
AccIII TCCGGA 2 cut(s) 220, 1462
AclWI GGATC 5 cut(s) 218, 231, 594, 723, 2214
AcoI YGGCCR 3 cut(s) 723, 1266, 1764
AcsI RAATTY 5 cut(s) 848, 1070, 1296, 1351, 1555
AcuI CTGAAG 3 cut(s) 273, 570, 2153
AcvI CACGTG 2 cut(s) 1953, 2145
AdeI CACNNNGTG 1 cut(s) 1956
AfiI CCNNNNNNNGG 8 cut(s) 316, 732, 829, 1257, 1447, 1591, 1592, 2229
AflIII ACRYGT 3 cut(s) 1413, 1749, 1950
AhdI GACNNNNNGTC 2 cut(s) 694, 1774
AjiI CACGTC 4 cut(s) 1165, 1752, 1858, 2013
AjnI CCWGG 2 cut(s) 1000, 1827
AjuI GAANNNNNNNTTGG 2 cut(s) 969, 1001
AleI CACNNNNGTG 1 cut(s) 2147
AloI GAACNNNNNNTCC 2 cut(s) 1382, 1414
Alw21I GWGCWC 6 cut(s) 606, 1290, 1608, 1689, 1871, 2144
Alw26I GTCTC 7 cut(s) 126, 539, 744, 1191, 1487, 2003, 2297
Alw44I GTGCAC 1 cut(s) 1604
AlwI GGATC 5 cut(s) 218, 231, 594, 723, 2214
AlwNI CAGNNNCTG 2 cut(s) 905, 1348
Ama87I CYCGRG 2 cut(s) 1925, 2254
Aor13HI TCCGGA 2 cut(s) 220, 1462
AoxI GGCC 5 cut(s) 723, 1138, 1266, 1422, 1764
ApaLI GTGCAC 1 cut(s) 1604
ApeKI GCWGC 4 cut(s) 902, 1080, 2023, 2164
ApoI RAATTY 5 cut(s) 848, 1070, 1296, 1351, 1555
Asp700I GAANNNNTTC 1 cut(s) 1397
Asp718I GGTACC 2 cut(s) 929, 1588
AspLEI GCGC 3 cut(s) 1513, 1801, 2242
AspS9I GGNCC 3 cut(s) 1438, 1704, 2251
AsuC2I CCSGG 6 cut(s) 1292, 1586, 1593, 1618, 2255, 2256
AsuHPI GGTGA 8 cut(s) 191, 374, 452, 476, 533, 1816, 2164, 2215
AvaI CYCGRG 2 cut(s) 1925, 2254
AvaII GGWCC 3 cut(s) 1438, 1704, 2251
AxyI CCTNAGG 2 cut(s) 33, 1011
BaeGI GKGCMC 2 cut(s) 684, 1608
BalI TGGCCA 1 cut(s) 725
BamHI GGATCC 1 cut(s) 223
BanI GGYRCC 5 cut(s) 73, 679, 929, 1588, 1956
BanII GRGCYC 3 cut(s) 606, 1871, 1922
BarI GAAGNNNNNNTAC 2 cut(s) 2207, 2239
BauI CACGAG 1 cut(s) 2042
BbrPI CACGTG 2 cut(s) 1953, 2145
BbsI GAAGAC 2 cut(s) 195, 261
Bbv12I GWGCWC 6 cut(s) 606, 1290, 1608, 1689, 1871, 2144
BbvCI CCTCAGC 2 cut(s) 731, 1979
BbvI GCAGC 4 cut(s) 914, 1067, 2010, 2176
BccI CCATC 7 cut(s) 92, 167, 237, 715, 1366, 1801, 2321
BceAI ACGGC 2 cut(s) 1409, 1765
BcgI CGANNNNNNTGC 2 cut(s) 1629, 1663
BciT130I CCWGG 2 cut(s) 1002, 1829
BciVI GTATCC 1 cut(s) 1058
BclI TGATCA 4 cut(s) 142, 795, 886, 907
BcnI CCSGG 6 cut(s) 1292, 1586, 1593, 1618, 2255, 2256
BcoDI GTCTC 7 cut(s) 126, 539, 744, 1191, 1487, 2003, 2297
BfaI CTAG 5 cut(s) 285, 291, 590, 863, 1142
BfuAI ACCTGC 2 cut(s) 657, 2233
BfuI GTATCC 1 cut(s) 1058
BglI GCCNNNNNGGC 1 cut(s) 810
BisI GCNGC 7 cut(s) 903, 1081, 1386, 1514, 1527, 2024, 2165
BlpI GCTNAGC 1 cut(s) 2051
BlsI GCNGC 7 cut(s) 904, 1082, 1387, 1515, 1528, 2025, 2166
Bme1390I CCNGG 8 cut(s) 1002, 1292, 1586, 1593, 1618, 1829, 2255, 2256
Bme18I GGWCC 3 cut(s) 1438, 1704, 2251
BmeRI GACNNNNNGTC 2 cut(s) 694, 1774
BmeT110I CYCGRG 2 cut(s) 1925, 2254
BmgBI CACGTC 4 cut(s) 1165, 1752, 1858, 2013
BmgT120I GGNCC 3 cut(s) 1438, 1704, 2251
BmrFI CCNGG 8 cut(s) 1002, 1292, 1586, 1593, 1618, 1829, 2255, 2256
BmrI ACTGGG 1 cut(s) 1189
BmsI GCATC 5 cut(s) 47, 340, 653, 1164, 1164
BmuI ACTGGG 1 cut(s) 1189
BpiI GAAGAC 2 cut(s) 195, 261
BplI GAGNNNNNCTC 2 cut(s) 724, 756
BpmI CTGGAG 3 cut(s) 1211, 1688, 1850
Bpu10I CCTNAGC 4 cut(s) 731, 1979, 2036, 2180
Bpu1102I GCTNAGC 1 cut(s) 2051
BpuEI CTTGAG 3 cut(s) 224, 966, 1469
BpuMI CCSGG 6 cut(s) 1292, 1586, 1593, 1618, 2255, 2256
BsaAI YACGTR 3 cut(s) 1953, 2145, 2278
BsaBI GATNNNNATC 2 cut(s) 102, 228
BsaI GGTCTC 1 cut(s) 1487
BsaJI CCNNGG 7 cut(s) 51, 69, 828, 879, 933, 2059, 2254
BsaWI WCCGGW 2 cut(s) 220, 1462
Bsc4I CCNNNNNNNGG 8 cut(s) 316, 732, 829, 1257, 1447, 1591, 1592, 2229
Bse118I RCCGGY 3 cut(s) 208, 2019, 2077
Bse1I ACTGG 3 cut(s) 924, 1184, 1800
Bse21I CCTNAGG 2 cut(s) 33, 1011
Bse3DI GCAATG 1 cut(s) 1235
Bse8I GATNNNNATC 2 cut(s) 102, 228
BseAI TCCGGA 2 cut(s) 220, 1462
BseBI CCWGG 2 cut(s) 1002, 1829
BseDI CCNNGG 7 cut(s) 51, 69, 828, 879, 933, 2059, 2254
BseGI GGATG 6 cut(s) 16, 229, 379, 511, 726, 2299
BseJI GATNNNNATC 2 cut(s) 102, 228
BseLI CCNNNNNNNGG 8 cut(s) 316, 732, 829, 1257, 1447, 1591, 1592, 2229
BseMI GCAATG 1 cut(s) 1235
BseMII CTCAG 8 cut(s) 549, 722, 969, 1025, 1313, 1970, 2018, 2027
BseNI ACTGG 3 cut(s) 924, 1184, 1800
BseRI GAGGAG 3 cut(s) 332, 614, 1344
BseSI GKGCMC 2 cut(s) 684, 1608
BseXI GCAGC 4 cut(s) 914, 1067, 2010, 2176
BseYI CCCAGC 1 cut(s) 1516
BsgI GTGCAG 2 cut(s) 1187, 2090
Bsh1236I CGCG 9 cut(s) 1370, 1513, 1529, 1728, 1742, 1760, 1787, 1801, 2240
BshFI GGCC 5 cut(s) 725, 1140, 1268, 1424, 1766
BshNI GGYRCC 5 cut(s) 73, 679, 929, 1588, 1956
BsiHKAI GWGCWC 6 cut(s) 606, 1290, 1608, 1689, 1871, 2144
BsiHKCI CYCGRG 2 cut(s) 1925, 2254
BsiWI CGTACG 1 cut(s) 1755
BslFI GGGAC 4 cut(s) 58, 67, 76, 1424
BslI CCNNNNNNNGG 8 cut(s) 316, 732, 829, 1257, 1447, 1591, 1592, 2229
BsmAI GTCTC 7 cut(s) 126, 539, 744, 1191, 1487, 2003, 2297
BsmBI CGTCTC 2 cut(s) 2003, 2297
BsmFI GGGAC 4 cut(s) 58, 67, 76, 1424
BsmI GAATGC 2 cut(s) 813, 1112
BsnI GGCC 5 cut(s) 725, 1140, 1268, 1424, 1766
Bso31I GGTCTC 1 cut(s) 1487
BsoBI CYCGRG 2 cut(s) 1925, 2254
Bsp1286I GDGCHC 8 cut(s) 606, 684, 1290, 1608, 1689, 1871, 1922, 2144
Bsp13I TCCGGA 2 cut(s) 220, 1462
Bsp1407I TGTACA 1 cut(s) 1848
Bsp1720I GCTNAGC 1 cut(s) 2051
Bsp19I CCATGG 2 cut(s) 828, 2059
Bsp68I TCGCGA 2 cut(s) 1370, 1728
BspANI GGCC 5 cut(s) 725, 1140, 1268, 1424, 1766
BspCNI CTCAG 8 cut(s) 550, 723, 968, 1024, 1314, 1971, 2019, 2028
BspEI TCCGGA 2 cut(s) 220, 1462
BspFNI CGCG 9 cut(s) 1370, 1513, 1529, 1728, 1742, 1760, 1787, 1801, 2240
BspHI TCATGA 1 cut(s) 1878
BspMI ACCTGC 2 cut(s) 657, 2233
BspPI GGATC 5 cut(s) 218, 231, 594, 723, 2214
BspT107I GGYRCC 5 cut(s) 73, 679, 929, 1588, 1956
BspTNI GGTCTC 1 cut(s) 1487
BsrBI CCGCTC 2 cut(s) 1385, 1702
BsrDI GCAATG 1 cut(s) 1235
BsrFI RCCGGY 3 cut(s) 208, 2019, 2077
BsrGI TGTACA 1 cut(s) 1848
BsrI ACTGG 3 cut(s) 924, 1184, 1800
BssAI RCCGGY 3 cut(s) 208, 2019, 2077
BssECI CCNNGG 7 cut(s) 51, 69, 828, 879, 933, 2059, 2254
BssSI CACGAG 1 cut(s) 2042
BssT1I CCWWGG 5 cut(s) 51, 69, 828, 933, 2059
Bst2BI CACGAG 1 cut(s) 2042
Bst2UI CCWGG 2 cut(s) 1002, 1829
Bst4CI ACNGT 4 cut(s) 137, 679, 788, 1504
Bst6I CTCTTC 3 cut(s) 390, 426, 1958
BstAPI GCANNNNNTGC 1 cut(s) 1174
BstAUI TGTACA 1 cut(s) 1848
BstBAI YACGTR 3 cut(s) 1953, 2145, 2278
BstC8I GCNNGC 9 cut(s) 684, 1110, 1266, 1471, 1648, 1689, 1744, 1939, 2021
BstDSI CCRYGG 2 cut(s) 828, 2059
BstF5I GGATG 6 cut(s) 16, 229, 379, 511, 726, 2299
BstFNI CGCG 9 cut(s) 1370, 1513, 1529, 1728, 1742, 1760, 1787, 1801, 2240
BstHHI GCGC 3 cut(s) 1513, 1801, 2242
BstMAI GTCTC 7 cut(s) 126, 539, 744, 1191, 1487, 2003, 2297
BstNI CCWGG 2 cut(s) 1002, 1829
BstNSI RCATGY 4 cut(s) 1112, 1417, 1473, 1941
BstSCI CCNGG 8 cut(s) 1000, 1290, 1584, 1591, 1616, 1827, 2253, 2254
BstSLI GKGCMC 2 cut(s) 684, 1608
BstSNI TACGTA 1 cut(s) 2278
BstUI CGCG 9 cut(s) 1370, 1513, 1529, 1728, 1742, 1760, 1787, 1801, 2240
BstV1I GCAGC 4 cut(s) 914, 1067, 2010, 2176
BstV2I GAAGAC 2 cut(s) 195, 261
BstX2I RGATCY 3 cut(s) 223, 586, 2219
BstXI CCANNNNNNTGG 1 cut(s) 1136
BstYI RGATCY 3 cut(s) 223, 586, 2219
Bsu36I CCTNAGG 2 cut(s) 33, 1011
BsuI GTATCC 1 cut(s) 1058
BsuRI GGCC 5 cut(s) 725, 1140, 1268, 1424, 1766
BtgI CCRYGG 2 cut(s) 828, 2059
BtgZI GCGATG 1 cut(s) 1385
BtrI CACGTC 4 cut(s) 1165, 1752, 1858, 2013
BtsCI GGATG 6 cut(s) 16, 229, 379, 511, 726, 2299
BtsIMutI CAGTG 4 cut(s) 142, 931, 963, 1177
BtuMI TCGCGA 2 cut(s) 1370, 1728
BveI ACCTGC 2 cut(s) 657, 2233
Cac8I GCNNGC 9 cut(s) 684, 1110, 1266, 1471, 1648, 1689, 1744, 1939, 2021
CaiI CAGNNNCTG 2 cut(s) 905, 1348
CciI TCATGA 1 cut(s) 1878
CfoI GCGC 3 cut(s) 1513, 1801, 2242
Cfr10I RCCGGY 3 cut(s) 208, 2019, 2077
Cfr13I GGNCC 3 cut(s) 1438, 1704, 2251
Cfr9I CCCGGG 1 cut(s) 2254
CpoI CGGWCCG 1 cut(s) 1704
CseI GACGC 6 cut(s) 556, 716, 1414, 1462, 1748, 2143
CspCI CAANNNNNGTGG 2 cut(s) 907, 942
CspI CGGWCCG 1 cut(s) 1704
DraIII CACNNNGTG 1 cut(s) 1956
DriI GACNNNNNGTC 2 cut(s) 694, 1774
EaeI YGGCCR 3 cut(s) 723, 1266, 1764
Eam1104I CTCTTC 3 cut(s) 390, 426, 1958
Eam1105I GACNNNNNGTC 2 cut(s) 694, 1774
EarI CTCTTC 3 cut(s) 390, 426, 1958
EciI GGCGGA 2 cut(s) 1403, 1583
Ecl136II GAGCTC 2 cut(s) 604, 1869
Eco105I TACGTA 1 cut(s) 2278
Eco130I CCWWGG 5 cut(s) 51, 69, 828, 933, 2059
Eco24I GRGCYC 3 cut(s) 606, 1871, 1922
Eco31I GGTCTC 1 cut(s) 1487
Eco32I GATATC 2 cut(s) 646, 2193
Eco47I GGWCC 3 cut(s) 1438, 1704, 2251
Eco53kI GAGCTC 2 cut(s) 604, 1869
Eco57I CTGAAG 3 cut(s) 273, 570, 2153
Eco72I CACGTG 2 cut(s) 1953, 2145
Eco81I CCTNAGG 2 cut(s) 33, 1011
Eco88I CYCGRG 2 cut(s) 1925, 2254
EcoICRI GAGCTC 2 cut(s) 604, 1869
EcoRI GAATTC 3 cut(s) 848, 1070, 1555
EcoRII CCWGG 2 cut(s) 1000, 1827
EcoRV GATATC 2 cut(s) 646, 2193
EcoT14I CCWWGG 5 cut(s) 51, 69, 828, 933, 2059
EcoT22I ATGCAT 2 cut(s) 1114, 1943
EcoT38I GRGCYC 3 cut(s) 606, 1871, 1922
ErhI CCWWGG 5 cut(s) 51, 69, 828, 933, 2059
Esp3I CGTCTC 2 cut(s) 2003, 2297
FalI AAGNNNNNCTT 2 cut(s) 1040, 1072
FaqI GGGAC 4 cut(s) 58, 67, 76, 1424
FauI CCCGC 2 cut(s) 691, 1794
FbaI TGATCA 4 cut(s) 142, 795, 886, 907
Fnu4HI GCNGC 7 cut(s) 903, 1081, 1386, 1514, 1527, 2024, 2165
FokI GGATG 6 cut(s) 23, 216, 386, 518, 733, 2306
FriOI GRGCYC 3 cut(s) 606, 1871, 1922
Fsp4HI GCNGC 7 cut(s) 903, 1081, 1386, 1514, 1527, 2024, 2165
FspBI CTAG 5 cut(s) 285, 291, 590, 863, 1142
GlaI GCGC 3 cut(s) 1512, 1800, 2241
GluI GCNGC 7 cut(s) 903, 1081, 1386, 1514, 1527, 2024, 2165
GsaI CCCAGC 1 cut(s) 1520
GsuI CTGGAG 3 cut(s) 1211, 1688, 1850
HaeIII GGCC 5 cut(s) 725, 1140, 1268, 1424, 1766
HgaI GACGC 6 cut(s) 556, 716, 1414, 1462, 1748, 2143
HhaI GCGC 3 cut(s) 1513, 1801, 2242
Hin6I GCGC 3 cut(s) 1511, 1799, 2240
HinP1I GCGC 3 cut(s) 1511, 1799, 2240
HincII GTYRAC 2 cut(s) 1477, 1614
HindII GTYRAC 2 cut(s) 1477, 1614
HindIII AAGCTT 2 cut(s) 245, 611
HphI GGTGA 8 cut(s) 191, 374, 452, 476, 533, 1816, 2164, 2215
Hpy166II GTNNAC 5 cut(s) 1090, 1477, 1606, 1614, 1623
Hpy8I GTNNAC 5 cut(s) 1090, 1477, 1606, 1614, 1623
HpyCH4III ACNGT 4 cut(s) 137, 679, 788, 1504
HspAI GCGC 3 cut(s) 1511, 1799, 2240
Kpn2I TCCGGA 2 cut(s) 220, 1462
KpnI GGTACC 2 cut(s) 933, 1592
KroI GCCGGC 1 cut(s) 2019
KroNI GCCGGC 1 cut(s) 2021
Ksp22I TGATCA 4 cut(s) 142, 795, 886, 907
LmnI GCTCC 8 cut(s) 22, 601, 1350, 1669, 1684, 1975, 2016, 2176
Lsp1109I GCAGC 4 cut(s) 914, 1067, 2010, 2176
LweI GCATC 5 cut(s) 47, 340, 653, 1164, 1164
MaeI CTAG 5 cut(s) 285, 291, 590, 863, 1142
MaeIII GTNAC 4 cut(s) 166, 403, 1895, 2156
MbiI CCGCTC 2 cut(s) 1385, 1702
MflI RGATCY 3 cut(s) 223, 586, 2219
MhlI GDGCHC 8 cut(s) 606, 684, 1290, 1608, 1689, 1871, 1922, 2144
MlsI TGGCCA 1 cut(s) 725
MluCI AATT 9 cut(s) 515, 631, 848, 1070, 1296, 1351, 1555, 2356, 2362
MluNI TGGCCA 1 cut(s) 725
MmeI TCCRAC 5 cut(s) 44, 1559, 1953, 2154, 2229
Mox20I TGGCCA 1 cut(s) 725
Mph1103I ATGCAT 2 cut(s) 1114, 1943
MroI TCCGGA 2 cut(s) 220, 1462
MroNI GCCGGC 1 cut(s) 2019
MroXI GAANNNNTTC 1 cut(s) 1397
MscI TGGCCA 1 cut(s) 725
MseI TTAA 4 cut(s) 489, 609, 1680, 2376
MslI CAYNNNNRTG 1 cut(s) 2147
Msp20I TGGCCA 1 cut(s) 725
MspA1I CMGCKG 2 cut(s) 686, 905
MspR9I CCNGG 8 cut(s) 1002, 1292, 1586, 1593, 1618, 1829, 2255, 2256
Mva1269I GAATGC 2 cut(s) 813, 1112
MvaI CCWGG 2 cut(s) 1002, 1829
MvnI CGCG 9 cut(s) 1370, 1513, 1529, 1728, 1742, 1760, 1787, 1801, 2240
NaeI GCCGGC 1 cut(s) 2021
NciI CCSGG 6 cut(s) 1292, 1586, 1593, 1618, 2255, 2256
NcoI CCATGG 2 cut(s) 828, 2059
NgoMIV GCCGGC 1 cut(s) 2019
NmeAIII GCCGAG 1 cut(s) 1294
NmuCI GTSAC 1 cut(s) 2156
NruI TCGCGA 2 cut(s) 1370, 1728
NsiI ATGCAT 2 cut(s) 1114, 1943
NspI RCATGY 4 cut(s) 1112, 1417, 1473, 1941
OliI CACNNNNGTG 1 cut(s) 2147
PaeI GCATGC 3 cut(s) 1112, 1473, 1941
PagI TCATGA 1 cut(s) 1878
PaqCI CACCTGC 2 cut(s) 657, 2233
PciI ACATGT 1 cut(s) 1413
PcsI WCGNNNNNNNCGW 8 cut(s) 1080, 1416, 1496, 1695, 1704, 1743, 1764, 2141
PctI GAATGC 2 cut(s) 813, 1112
PdiI GCCGGC 1 cut(s) 2021
PdmI GAANNNNTTC 1 cut(s) 1397
PfeI GAWTC 7 cut(s) 217, 445, 869, 965, 1365, 2206, 2235
Pfl23II CGTACG 1 cut(s) 1755
PkrI GCNGC 7 cut(s) 904, 1082, 1387, 1515, 1528, 2025, 2166
PmaCI CACGTG 2 cut(s) 1953, 2145
PmlI CACGTG 2 cut(s) 1953, 2145
Ppu21I YACGTR 3 cut(s) 1953, 2145, 2278
PscI ACATGT 1 cut(s) 1413
Psp124BI GAGCTC 2 cut(s) 606, 1871
Psp6I CCWGG 2 cut(s) 1000, 1827
PspCI CACGTG 2 cut(s) 1953, 2145
PspFI CCCAGC 1 cut(s) 1516
PspGI CCWGG 2 cut(s) 1000, 1827
PspLI CGTACG 1 cut(s) 1755
PspPI GGNCC 3 cut(s) 1438, 1704, 2251
PstNI CAGNNNCTG 2 cut(s) 905, 1348
PsuI RGATCY 3 cut(s) 223, 586, 2219
PvuII CAGCTG 1 cut(s) 905
RruI TCGCGA 2 cut(s) 1370, 1728
RseI CAYNNNNRTG 1 cut(s) 2147
Rsr2I CGGWCCG 1 cut(s) 1704
RsrII CGGWCCG 1 cut(s) 1704
SacI GAGCTC 2 cut(s) 606, 1871
SaqAI TTAA 4 cut(s) 489, 609, 1680, 2376
SatI GCNGC 7 cut(s) 903, 1081, 1386, 1514, 1527, 2024, 2165
Sau96I GGNCC 3 cut(s) 1438, 1704, 2251
ScrFI CCNGG 8 cut(s) 1002, 1292, 1586, 1593, 1618, 1829, 2255, 2256
SduI GDGCHC 8 cut(s) 606, 684, 1290, 1608, 1689, 1871, 1922, 2144
SfaNI GCATC 5 cut(s) 47, 340, 653, 1164, 1164
SinI GGWCC 3 cut(s) 1438, 1704, 2251
SmaI CCCGGG 1 cut(s) 2256
SmiMI CAYNNNNRTG 1 cut(s) 2147
SmlI CTYRAG 3 cut(s) 203, 981, 1484
SmoI CTYRAG 3 cut(s) 203, 981, 1484
SnaBI TACGTA 1 cut(s) 2278
SphI GCATGC 3 cut(s) 1112, 1473, 1941
Sse9I AATT 9 cut(s) 515, 631, 848, 1070, 1296, 1351, 1555, 2356, 2362
SspMI CTAG 5 cut(s) 285, 291, 590, 863, 1142
SstI GAGCTC 2 cut(s) 606, 1871
StyD4I CCNGG 8 cut(s) 1000, 1290, 1584, 1591, 1616, 1827, 2253, 2254
StyI CCWWGG 5 cut(s) 51, 69, 828, 933, 2059
TaaI ACNGT 4 cut(s) 137, 679, 788, 1504
TaqII GACCGA 1 cut(s) 1721
TasI AATT 9 cut(s) 515, 631, 848, 1070, 1296, 1351, 1555, 2356, 2362
TatI WGTACW 2 cut(s) 1653, 1848
TauI GCSGC 3 cut(s) 1388, 1516, 1529
TfiI GAWTC 7 cut(s) 217, 445, 869, 965, 1365, 2206, 2235
Tru1I TTAA 4 cut(s) 489, 609, 1680, 2376
Tru9I TTAA 4 cut(s) 489, 609, 1680, 2376
TscAI CASTG 4 cut(s) 142, 931, 963, 1184
TseFI GTSAC 1 cut(s) 2156
TseI GCWGC 4 cut(s) 902, 1080, 2023, 2164
Tsp45I GTSAC 1 cut(s) 2156
TspDTI ATGAA 6 cut(s) 198, 540, 1134, 1643, 1867, 1898
TspGWI ACGGA 4 cut(s) 739, 1273, 1505, 1905
TspMI CCCGGG 1 cut(s) 2254
TspRI CASTG 4 cut(s) 142, 931, 963, 1184
VneI GTGCAC 1 cut(s) 1604
VpaK11BI GGWCC 3 cut(s) 1438, 1704, 2251
XapI RAATTY 5 cut(s) 848, 1070, 1296, 1351, 1555
XbaI TCTAGA 2 cut(s) 284, 862
XceI RCATGY 4 cut(s) 1112, 1417, 1473, 1941
XcmI CCANNNNNNNNNTGG 2 cut(s) 835, 1504
XmaI CCCGGG 1 cut(s) 2254
XmnI GAANNNNTTC 1 cut(s) 1397
XspI CTAG 5 cut(s) 285, 291, 590, 863, 1142
Zsp2I ATGCAT 2 cut(s) 1114, 1943
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.