Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0009879.1

Orthogroup ID

OG0007697

Physical Location & Seq

Genomic Coordinates Forward (+)

10786 .. 13224

Gene Structure 2439 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0009879.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2439 bp

atggatgaggctaccaacacccctaaggcattaaagactcctaaggctttagggacccccaagggcaatgtgacggatccattcgaaaatcaaaaggaagattccgaggagaacaaaaagcagggacaagagaatgctgatcagaaggaggaagagaaggacagtaccggtggcgaacacagcggtccccttgagcctgttgagataccggaagatccccatcccaccctcgaaaagctttgtgatgacattgagcgatgcatctcttcattgcctacgcctaacgagaaagatgaaaaccaacaagaagagaaggataatgcaaatgatgaggcaaaagatacaaaaggtgatgagaatgatgggaaggatacaaaagatgacaaggaagaaaaggatgtaaaagatgagaagggtgaaaaggaagaagagaagggtgagaaagatgcaaaggagggtgaaaagaatgacaaggaagaaaaggatgtgaaggatgagaacaaggatgatgaaaaggctgcagatcaggatgagaaagaattaggtgacaaagatgcaaaggatgagaaagaggctgaaaaagtcgtcgaaaaagaaaaggatctcgttccagacgagctccttaagcttattgacaagttcttgacttgggtagatgatatctgttgcgaaggcagatgcaggtgggggacggtgcctcaagacgacgaggtgttcttggaggctgtggatctgatggccaagatgagggagtctctcttgtcggtctgttctatgggattgaaattccaagaaaggcacggtggtttgatcaaccgcctaagtagcattcagcaccgagccatggcctatctggaagaagaattcagaatccttctagaagaatccaaaaccgagtctgatcatcatcactctacagcagctgatcacaaccataaccataaccataacagtaacaaagacagcagcagtggtaacaaaggaaagaacgatcaagaatcacaaccggaatccgagtcagaatcaaataaagaaggggttgttgaatttcccgggttccctgaggaggtcgtgtccaacctgaataaaatagccaccaagatgatctccgccggctacgaatccgagtgttgcgaggtctacatcatctccaggaggcatgcattcgatgaaaatctccacaagctcggcctagagaagcacagcatcgacgacgtgcagaagatgcactgggaagcgttggagagagagatcatgttgtgggtcaaggcattcaagcaatgctcccaattctacttttccggtgagcgccagctggcagaatcggtgtttccggagccggtgctttccgagcagacgccgatatggtcgtgtctgttcagcaatctgagcagaggagtgatgatacagctcctgaatttcgccgaaggaatcgccatgtcgaaaagagcggcggagaaactgttcaagacgctcgacatgtacgaggcggtaaaggagatgctccccaagatagacgagctttttccgggggagtgcgccagggagctgaagacggagaccacgacggtgctgaaccggctgggcgaggcggcgatattaatcttctgtgatctggagaattccatcaaggccgaaacgggtcggaacccggttccgggcggggcggtccacccgttgacccggtacacgatgaactacctgagatacgcgtgcgagtacaaggagacgctggagctggtgttcaaggagcacaccaagatcgagcggtccgactcgacgagcaggcctgacggtcgcgacgattacgacgcgagcgacacgtcgttcgagatacccgacgacgagtcgcctttcgcggtgcaactggcgcgggtgatggacttgttggactcgaacctggaggggaaggcgaagctgtacaaggacgtggcgttgagctcgattttcatgatgaacaacgggcgctacatcttgcagaagatcaagggctctccggagatcaacgcctgcatgggcgacaagtggtgccggaagaggtcgacggagctgaggcagtaccacaagaactaccagagagagacgtggagccggctgttgagttttttgagccacgaggggctgagcaaccacggcaaagtgagcaagcctgtgctgaaagagaggttcaagagcttcaacgctatgtttgatgagattcataagacgcagagcacgtgggtggtgagtgacgagcagcttcagtcggagcttagggtttccatatcggcggtggtcattccggcgtaccggtcgttcttggggagattctcgcagacgttggacccgggaaggcaaacagagaagtacattaagtttcagccggaagatatagagacgtacattgatgagctatttgatggcaaccccagtacctccatatttaggaaaaaaccttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04910 map04910

Pfam Domains

Protein Families

Exo70

Protein Analysis

812

Amino Acids

92.8

Weight (kDa)

4.89

Isoelectric Point (pI)

47.06

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007697)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G13990
fragaria_vesca	FvH4_6g53940
malus_domestica	MD00G1220500.v1.1 MD09G1007100.v1.1 MD10G1123900.v1.1 MD10G1124000.v1.1 MD17G1010900.v1.1 MD17G1254300.v1.1
prunus_persica	Prupe.3G310000_v2.0.a1
pyrus_communis	pycom111g00530 pycom17g00560
rosa_chinensis	RchiOBHm_Chr2g0176101
rosa_laevigata	RLG00000022381
rosa_multiflora	Rmu_co8050736.1_g000001 Rmu_sc0009879.1_g000001 Rmu_sc0012674.1_g000001 Rmu_sc0041131.1_g000001
rosa_roxburghii	Rroxscaffold_2G00076770
rosa_rugosa	Rorug02G0590700
rosa_samantha	Rh2AG669300 Rh2BG680900 Rh2CG643800 Rh2DG694600
rosa_wichuraiana	Rw2G054900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	672
Acc36I	ACCTGC	1 cut(s)	672
AccB1I	GGYRCC	2 cut(s)	694, 2028
AccBSI	CCGCTC	2 cut(s)	1451, 1768
AccI	GTMKAC	2 cut(s)	1140, 2042
AccII	CGCG	5 cut(s)	1712, 1800, 1814, 1859, 1873
AccIII	TCCGGA	2 cut(s)	1333, 1996
AclWI	GGATC	5 cut(s)	71, 84, 209, 609, 738
AcoI	YGGCCR	1 cut(s)	738
AcsI	RAATTY	5 cut(s)	785, 863, 1046, 1417, 1621
AcuI	CTGAAG	2 cut(s)	1571, 2225
AcvI	CACGTG	1 cut(s)	2217
AcyI	GRCGYC	1 cut(s)	1358
AfiI	CCNNNNNNNGG	6 cut(s)	747, 844, 1066, 1657, 1658, 2424
AflII	CTTAAG	1 cut(s)	623
AflIII	ACRYGT	3 cut(s)	1479, 1710, 1821
AgeI	ACCGGT	2 cut(s)	167, 2289
AgsI	TTSAA	7 cut(s)	784, 1046, 1276, 1468, 1747, 2170, 2179
AhdI	GACNNNNNGTC	1 cut(s)	1846
AjiI	CACGTC	4 cut(s)	1216, 1824, 1930, 2085
AjnI	CCWGG	3 cut(s)	1151, 1541, 1899
AleI	CACNNNNGTG	2 cut(s)	1568, 2219
AloI	GAACNNNNNNTCC	4 cut(s)	1448, 1480, 1727, 1759
Alw21I	GWGCWC	4 cut(s)	621, 1755, 1943, 2216
Alw26I	GTCTC	5 cut(s)	759, 1553, 1721, 2075, 2369
AlwI	GGATC	5 cut(s)	71, 84, 209, 609, 738
AlwNI	CAGNNNCTG	2 cut(s)	923, 1414
Ama87I	CYCGRG	2 cut(s)	1052, 2326
Aor13HI	TCCGGA	2 cut(s)	1333, 1996
AoxI	GGCC	5 cut(s)	738, 846, 1189, 1632, 1787
ApeKI	GCWGC	4 cut(s)	518, 920, 966, 2236
ApoI	RAATTY	5 cut(s)	785, 863, 1046, 1417, 1621
ArsI	GACNNNNNNTTYG	2 cut(s)	1811, 1843
AseI	ATTAAT	1 cut(s)	1601
AsiGI	ACCGGT	2 cut(s)	167, 2289
Asp700I	GAANNNNTTC	1 cut(s)	1463
AspLEI	GCGC	4 cut(s)	1311, 1541, 1873, 1968
AspS9I	GGNCC	5 cut(s)	54, 185, 1669, 1770, 2323
AsuC2I	CCSGG	8 cut(s)	1053, 1054, 1530, 1652, 1659, 1684, 2327, 2328
AsuHPI	GGTGA	8 cut(s)	362, 428, 449, 470, 557, 1316, 1888, 2236
AsuII	TTCGAA	1 cut(s)	84
AvaI	CYCGRG	2 cut(s)	1052, 2326
AvaII	GGWCC	5 cut(s)	54, 185, 1669, 1770, 2323
AxyI	CCTNAGG	3 cut(s)	24, 42, 1062
BaeI	ACNNNNGTAYC	2 cut(s)	2395, 2428
BalI	TGGCCA	1 cut(s)	740
BamHI	GGATCC	1 cut(s)	76
BanI	GGYRCC	2 cut(s)	694, 2028
BanII	GRGCYC	3 cut(s)	621, 1943, 1994
BauI	CACGAG	1 cut(s)	2114
BbrPI	CACGTG	1 cut(s)	2217
BbsI	GAAGAC	1 cut(s)	1559
Bbv12I	GWGCWC	4 cut(s)	621, 1755, 1943, 2216
BbvCI	CCTCAGC	1 cut(s)	2051
BbvI	GCAGC	4 cut(s)	505, 932, 978, 2248
BccI	CCATC	6 cut(s)	228, 356, 730, 1634, 1873, 2393
BceAI	ACGGC	1 cut(s)	2149
BciT130I	CCWGG	3 cut(s)	1153, 1543, 1901
BciVI	GTATCC	1 cut(s)	364
BclI	TGATCA	4 cut(s)	139, 810, 901, 925
BcnI	CCSGG	8 cut(s)	1053, 1054, 1530, 1652, 1659, 1684, 2327, 2328
BcoDI	GTCTC	5 cut(s)	759, 1553, 1721, 2075, 2369
BfaI	CTAG	2 cut(s)	878, 1193
BfmI	CTRYAG	2 cut(s)	519, 915
BfoI	RGCGCY	2 cut(s)	1312, 1969
BfrI	CTTAAG	1 cut(s)	623
BfuAI	ACCTGC	1 cut(s)	672
BfuI	GTATCC	1 cut(s)	364
BisI	GCNGC	6 cut(s)	519, 921, 967, 1452, 1593, 2237
BlpI	GCTNAGC	1 cut(s)	2123
BlsI	GCNGC	6 cut(s)	520, 922, 968, 1453, 1594, 2238
Bme18I	GGWCC	5 cut(s)	54, 185, 1669, 1770, 2323
BmeRI	GACNNNNNGTC	1 cut(s)	1846
BmeT110I	CYCGRG	2 cut(s)	1052, 2326
BmgBI	CACGTC	4 cut(s)	1216, 1824, 1930, 2085
BmgT120I	GGNCC	5 cut(s)	54, 185, 1669, 1770, 2323
BmrI	ACTGGG	2 cut(s)	1240, 2403
BmsI	GCATC	8 cut(s)	248, 270, 436, 544, 668, 1215, 1215, 1491
BmuI	ACTGGG	2 cut(s)	1240, 2403
BpiI	GAAGAC	1 cut(s)	1559
BplI	GAGNNNNNCTC	2 cut(s)	739, 771
BpmI	CTGGAG	4 cut(s)	1135, 1637, 1754, 1922
Bpu10I	CCTNAGC	2 cut(s)	2051, 2252
Bpu1102I	GCTNAGC	1 cut(s)	2123
Bpu14I	TTCGAA	1 cut(s)	84
BpuEI	CTTGAG	2 cut(s)	212, 684
BpuMI	CCSGG	8 cut(s)	1053, 1054, 1530, 1652, 1659, 1684, 2327, 2328
BsaAI	YACGTR	1 cut(s)	2217
BsaBI	GATNNNNATC	4 cut(s)	219, 906, 1173, 1601
BsaHI	GRCGYC	1 cut(s)	1358
BsaI	GGTCTC	1 cut(s)	1553
BsaJI	CCNNGG	8 cut(s)	60, 105, 843, 1052, 1529, 1542, 2131, 2326
BsaWI	WCCGGW	7 cut(s)	167, 208, 1006, 1301, 1333, 1996, 2289
BsaXI	ACNNNNNCTCC	8 cut(s)	1058, 1088, 1133, 1163, 1448, 1478, 1727, 1757
Bsc4I	CCNNNNNNNGG	6 cut(s)	747, 844, 1066, 1657, 1658, 2424
Bse118I	RCCGGY	6 cut(s)	167, 1112, 1339, 1578, 2091, 2289
Bse1I	ACTGG	3 cut(s)	1235, 1872, 2409
Bse21I	CCTNAGG	3 cut(s)	24, 42, 1062
Bse3DI	GCAATG	3 cut(s)	73, 269, 1286
Bse8I	GATNNNNATC	4 cut(s)	219, 906, 1173, 1601
BseAI	TCCGGA	2 cut(s)	1333, 1996
BseBI	CCWGG	3 cut(s)	1153, 1543, 1901
BseDI	CCNNGG	8 cut(s)	60, 105, 843, 1052, 1529, 1542, 2131, 2326
BseGI	GGATG	8 cut(s)	10, 220, 403, 490, 499, 511, 535, 568
BseJI	GATNNNNATC	4 cut(s)	219, 906, 1173, 1601
BseLI	CCNNNNNNNGG	6 cut(s)	747, 844, 1066, 1657, 1658, 2424
BseMI	GCAATG	3 cut(s)	73, 269, 1286
BseMII	CTCAG	5 cut(s)	1053, 1379, 1694, 2042, 2114
BseNI	ACTGG	3 cut(s)	1235, 1872, 2409
BseRI	GAGGAG	3 cut(s)	122, 1079, 1410
BseXI	GCAGC	4 cut(s)	505, 932, 978, 2248
BseYI	CCCAGC	1 cut(s)	1582
BsgI	GTGCAG	1 cut(s)	1238
Bsh1236I	CGCG	5 cut(s)	1712, 1800, 1814, 1859, 1873
Bsh1285I	CGRYCG	2 cut(s)	1798, 2294
BshFI	GGCC	5 cut(s)	740, 848, 1191, 1634, 1789
BshNI	GGYRCC	2 cut(s)	694, 2028
BshTI	ACCGGT	2 cut(s)	167, 2289
BsiEI	CGRYCG	2 cut(s)	1798, 2294
BsiHKAI	GWGCWC	4 cut(s)	621, 1755, 1943, 2216
BsiHKCI	CYCGRG	2 cut(s)	1052, 2326
BslFI	GGGAC	4 cut(s)	67, 138, 171, 703
BslI	CCNNNNNNNGG	6 cut(s)	747, 844, 1066, 1657, 1658, 2424
BsmAI	GTCTC	5 cut(s)	759, 1553, 1721, 2075, 2369
BsmBI	CGTCTC	3 cut(s)	1721, 2075, 2369
BsmFI	GGGAC	4 cut(s)	67, 138, 171, 703
BsmI	GAATGC	4 cut(s)	139, 828, 1163, 1271
BsnI	GGCC	5 cut(s)	740, 848, 1191, 1634, 1789
Bso31I	GGTCTC	1 cut(s)	1553
BsoBI	CYCGRG	2 cut(s)	1052, 2326
Bsp119I	TTCGAA	1 cut(s)	84
Bsp1286I	GDGCHC	5 cut(s)	621, 1755, 1943, 1994, 2216
Bsp13I	TCCGGA	2 cut(s)	1333, 1996
Bsp1407I	TGTACA	1 cut(s)	1920
Bsp1720I	GCTNAGC	1 cut(s)	2123
Bsp19I	CCATGG	1 cut(s)	843
Bsp68I	TCGCGA	1 cut(s)	1800
BspANI	GGCC	5 cut(s)	740, 848, 1191, 1634, 1789
BspCNI	CTCAG	5 cut(s)	1054, 1380, 1695, 2043, 2115
BspEI	TCCGGA	2 cut(s)	1333, 1996
BspFNI	CGCG	5 cut(s)	1712, 1800, 1814, 1859, 1873
BspHI	TCATGA	1 cut(s)	1950
BspMAI	CTGCAG	1 cut(s)	523
BspMI	ACCTGC	1 cut(s)	672
BspPI	GGATC	5 cut(s)	71, 84, 209, 609, 738
BspT104I	TTCGAA	1 cut(s)	84
BspT107I	GGYRCC	2 cut(s)	694, 2028
BspTI	CTTAAG	1 cut(s)	623
BspTNI	GGTCTC	1 cut(s)	1553
BsrBI	CCGCTC	2 cut(s)	1451, 1768
BsrDI	GCAATG	3 cut(s)	73, 269, 1286
BsrFI	RCCGGY	6 cut(s)	167, 1112, 1339, 1578, 2091, 2289
BsrGI	TGTACA	1 cut(s)	1920
BsrI	ACTGG	3 cut(s)	1235, 1872, 2409
BssAI	RCCGGY	6 cut(s)	167, 1112, 1339, 1578, 2091, 2289
BssECI	CCNNGG	8 cut(s)	60, 105, 843, 1052, 1529, 1542, 2131, 2326
BssNI	GRCGYC	1 cut(s)	1358
BssSI	CACGAG	1 cut(s)	2114
BssT1I	CCWWGG	2 cut(s)	60, 843
Bst2BI	CACGAG	1 cut(s)	2114
Bst2UI	CCWGG	3 cut(s)	1153, 1543, 1901
Bst4CI	ACNGT	7 cut(s)	164, 694, 803, 953, 1464, 1570, 1796
Bst6I	CTCTTC	5 cut(s)	147, 271, 303, 423, 2030
BstACI	GRCGYC	1 cut(s)	1358
BstAFI	CTTAAG	1 cut(s)	623
BstAPI	GCANNNNNTGC	1 cut(s)	1225
BstAUI	TGTACA	1 cut(s)	1920
BstBAI	YACGTR	1 cut(s)	2217
BstBI	TTCGAA	1 cut(s)	84
BstDEI	CTNAG	9 cut(s)	24, 42, 821, 1062, 1388, 1703, 2051, 2123, 2252
BstDSI	CCRYGG	2 cut(s)	843, 2131
BstF5I	GGATG	8 cut(s)	10, 220, 403, 490, 499, 511, 535, 568
BstFNI	CGCG	5 cut(s)	1712, 1800, 1814, 1859, 1873
BstH2I	RGCGCY	2 cut(s)	1312, 1969
BstHHI	GCGC	4 cut(s)	1311, 1541, 1873, 1968
BstMAI	GTCTC	5 cut(s)	759, 1553, 1721, 2075, 2369
BstMCI	CGRYCG	2 cut(s)	1798, 2294
BstNI	CCWGG	3 cut(s)	1153, 1543, 1901
BstNSI	RCATGY	2 cut(s)	1163, 1483
BstSFI	CTRYAG	2 cut(s)	519, 915
BstUI	CGCG	5 cut(s)	1712, 1800, 1814, 1859, 1873
BstV1I	GCAGC	4 cut(s)	505, 932, 978, 2248
BstV2I	GAAGAC	1 cut(s)	1559
BstX2I	RGATCY	4 cut(s)	76, 214, 601, 730
BstYI	RGATCY	4 cut(s)	76, 214, 601, 730
Bsu36I	CCTNAGG	3 cut(s)	24, 42, 1062
BsuI	GTATCC	1 cut(s)	364
BsuRI	GGCC	5 cut(s)	740, 848, 1191, 1634, 1789
BtgI	CCRYGG	2 cut(s)	843, 2131
BtgZI	GCGATG	1 cut(s)	271
BtrI	CACGTC	4 cut(s)	1216, 1824, 1930, 2085
BtsCI	GGATG	8 cut(s)	10, 220, 403, 490, 499, 511, 535, 568
BtsI	GCAGTG	1 cut(s)	976
BtsIMutI	CAGTG	2 cut(s)	976, 1228
BtuMI	TCGCGA	1 cut(s)	1800
BveI	ACCTGC	1 cut(s)	672
CaiI	CAGNNNCTG	2 cut(s)	923, 1414
CciI	TCATGA	1 cut(s)	1950
CfoI	GCGC	4 cut(s)	1311, 1541, 1873, 1968
Cfr10I	RCCGGY	6 cut(s)	167, 1112, 1339, 1578, 2091, 2289
Cfr13I	GGNCC	5 cut(s)	54, 185, 1669, 1770, 2323
Cfr9I	CCCGGG	2 cut(s)	1052, 2326
CpoI	CGGWCCG	1 cut(s)	1770
CseI	GACGC	5 cut(s)	1366, 1480, 1738, 1820, 2215
CspAI	ACCGGT	2 cut(s)	167, 2289
CspI	CGGWCCG	1 cut(s)	1770
CviAII	CATG	7 cut(s)	844, 1160, 1255, 1438, 1480, 1951, 2014
DdeI	CTNAG	9 cut(s)	24, 42, 821, 1062, 1388, 1703, 2051, 2123, 2252
DriI	GACNNNNNGTC	1 cut(s)	1846
EaeI	YGGCCR	1 cut(s)	738
Eam1104I	CTCTTC	5 cut(s)	147, 271, 303, 423, 2030
Eam1105I	GACNNNNNGTC	1 cut(s)	1846
EarI	CTCTTC	5 cut(s)	147, 271, 303, 423, 2030
EciI	GGCGGA	2 cut(s)	1099, 1469
Ecl136II	GAGCTC	2 cut(s)	619, 1941
Eco130I	CCWWGG	2 cut(s)	60, 843
Eco147I	AGGCCT	1 cut(s)	1789
Eco24I	GRGCYC	3 cut(s)	621, 1943, 1994
Eco31I	GGTCTC	1 cut(s)	1553
Eco32I	GATATC	1 cut(s)	661
Eco47I	GGWCC	5 cut(s)	54, 185, 1669, 1770, 2323
Eco53kI	GAGCTC	2 cut(s)	619, 1941
Eco57I	CTGAAG	2 cut(s)	1571, 2225
Eco72I	CACGTG	1 cut(s)	2217
Eco81I	CCTNAGG	3 cut(s)	24, 42, 1062
Eco88I	CYCGRG	2 cut(s)	1052, 2326
EcoICRI	GAGCTC	2 cut(s)	619, 1941
EcoO109I	RGGNCCY	1 cut(s)	54
EcoRI	GAATTC	2 cut(s)	863, 1621
EcoRII	CCWGG	3 cut(s)	1151, 1541, 1899
EcoRV	GATATC	1 cut(s)	661
EcoT14I	CCWWGG	2 cut(s)	60, 843
EcoT22I	ATGCAT	2 cut(s)	263, 1165
EcoT38I	GRGCYC	3 cut(s)	621, 1943, 1994
ErhI	CCWWGG	2 cut(s)	60, 843
Esp3I	CGTCTC	3 cut(s)	1721, 2075, 2369
FaeI	CATG	7 cut(s)	847, 1163, 1258, 1441, 1483, 1954, 2017
FaqI	GGGAC	4 cut(s)	67, 138, 171, 703
FatI	CATG	7 cut(s)	843, 1159, 1254, 1437, 1479, 1950, 2013
FauI	CCCGC	2 cut(s)	1655, 1866
FbaI	TGATCA	4 cut(s)	139, 810, 901, 925
FblI	GTMKAC	2 cut(s)	1140, 2042
Fnu4HI	GCNGC	6 cut(s)	519, 921, 967, 1452, 1593, 2237
FokI	GGATG	8 cut(s)	17, 207, 410, 497, 506, 518, 542, 575
FriOI	GRGCYC	3 cut(s)	621, 1943, 1994
Fsp4HI	GCNGC	6 cut(s)	519, 921, 967, 1452, 1593, 2237
FspBI	CTAG	2 cut(s)	878, 1193
GlaI	GCGC	4 cut(s)	1310, 1540, 1872, 1967
GluI	GCNGC	6 cut(s)	519, 921, 967, 1452, 1593, 2237
GsaI	CCCAGC	1 cut(s)	1586
GsuI	CTGGAG	4 cut(s)	1135, 1637, 1754, 1922
HaeII	RGCGCY	2 cut(s)	1312, 1969
HaeIII	GGCC	5 cut(s)	740, 848, 1191, 1634, 1789
HgaI	GACGC	5 cut(s)	1366, 1480, 1738, 1820, 2215
HhaI	GCGC	4 cut(s)	1311, 1541, 1873, 1968
Hin1I	GRCGYC	1 cut(s)	1358
Hin1II	CATG	7 cut(s)	847, 1163, 1258, 1441, 1483, 1954, 2017
Hin6I	GCGC	4 cut(s)	1309, 1539, 1871, 1966
HinP1I	GCGC	4 cut(s)	1309, 1539, 1871, 1966
HincII	GTYRAC	2 cut(s)	1680, 2043
HindII	GTYRAC	2 cut(s)	1680, 2043
HindIII	AAGCTT	2 cut(s)	236, 626
HphI	GGTGA	8 cut(s)	362, 428, 449, 470, 557, 1316, 1888, 2236
Hpy166II	GTNNAC	5 cut(s)	1141, 1672, 1680, 1689, 2043
Hpy8I	GTNNAC	5 cut(s)	1141, 1672, 1680, 1689, 2043
HpyCH4III	ACNGT	7 cut(s)	164, 694, 803, 953, 1464, 1570, 1796
HpyCH4IV	ACGT	7 cut(s)	1215, 1823, 1929, 2084, 2216, 2318, 2378
HpyF3I	CTNAG	9 cut(s)	24, 42, 821, 1062, 1388, 1703, 2051, 2123, 2252
HpySE526I	ACGT	7 cut(s)	1215, 1823, 1929, 2084, 2216, 2318, 2378
Hsp92I	GRCGYC	1 cut(s)	1358
Hsp92II	CATG	7 cut(s)	847, 1163, 1258, 1441, 1483, 1954, 2017
HspAI	GCGC	4 cut(s)	1309, 1539, 1871, 1966
KflI	GGGWCCC	1 cut(s)	54
Kpn2I	TCCGGA	2 cut(s)	1333, 1996
KroI	GCCGGC	2 cut(s)	1112, 2091
KroNI	GCCGGC	2 cut(s)	1114, 2093
Ksp22I	TGATCA	4 cut(s)	139, 810, 901, 925
Lsp1109I	GCAGC	4 cut(s)	505, 932, 978, 2248
LweI	GCATC	8 cut(s)	248, 270, 436, 544, 668, 1215, 1215, 1491
MaeI	CTAG	2 cut(s)	878, 1193
MaeII	ACGT	7 cut(s)	1215, 1823, 1929, 2084, 2216, 2318, 2378
MaeIII	GTNAC	5 cut(s)	70, 545, 953, 974, 2228
MbiI	CCGCTC	2 cut(s)	1451, 1768
MflI	RGATCY	4 cut(s)	76, 214, 601, 730
MhlI	GDGCHC	5 cut(s)	621, 1755, 1943, 1994, 2216
MlsI	TGGCCA	1 cut(s)	740
MluCI	AATT	7 cut(s)	539, 785, 863, 1046, 1289, 1417, 1621
MluI	ACGCGT	1 cut(s)	1710
MluNI	TGGCCA	1 cut(s)	740
MlyI	GAGTC	7 cut(s)	31, 761, 905, 1025, 1769, 1856, 1886
MmeI	TCCRAC	7 cut(s)	1101, 1221, 1625, 1797, 1869, 2226, 2301
Mox20I	TGGCCA	1 cut(s)	740
Mph1103I	ATGCAT	2 cut(s)	263, 1165
MroI	TCCGGA	2 cut(s)	1333, 1996
MroNI	GCCGGC	2 cut(s)	1112, 2091
MroXI	GAANNNNTTC	1 cut(s)	1463
MscI	TGGCCA	1 cut(s)	740
MseI	TTAA	4 cut(s)	32, 624, 1601, 2352
MslI	CAYNNNNRTG	3 cut(s)	1100, 1568, 2219
Msp20I	TGGCCA	1 cut(s)	740
MspA1I	CMGCKG	3 cut(s)	183, 923, 1315
MspCI	CTTAAG	1 cut(s)	623
Mva1269I	GAATGC	4 cut(s)	139, 828, 1163, 1271
MvaI	CCWGG	3 cut(s)	1153, 1543, 1901
MvnI	CGCG	5 cut(s)	1712, 1800, 1814, 1859, 1873
NaeI	GCCGGC	2 cut(s)	1114, 2093
NciI	CCSGG	8 cut(s)	1053, 1054, 1530, 1652, 1659, 1684, 2327, 2328
NcoI	CCATGG	1 cut(s)	843
NgoMIV	GCCGGC	2 cut(s)	1112, 2091
NlaIII	CATG	7 cut(s)	847, 1163, 1258, 1441, 1483, 1954, 2017
NmeAIII	GCCGAG	1 cut(s)	1167
NmuCI	GTSAC	3 cut(s)	70, 545, 2228
NruI	TCGCGA	1 cut(s)	1800
NsiI	ATGCAT	2 cut(s)	263, 1165
NspI	RCATGY	2 cut(s)	1163, 1483
NspV	TTCGAA	1 cut(s)	84
OliI	CACNNNNGTG	2 cut(s)	1568, 2219
PaeI	GCATGC	1 cut(s)	1163
PagI	TCATGA	1 cut(s)	1950
PaqCI	CACCTGC	1 cut(s)	672
PceI	AGGCCT	1 cut(s)	1789
PciI	ACATGT	1 cut(s)	1479
PcsI	WCGNNNNNNNCGW	8 cut(s)	612, 1482, 1562, 1770, 1800, 1815, 1836, 2213
PctI	GAATGC	4 cut(s)	139, 828, 1163, 1271
PdiI	GCCGGC	2 cut(s)	1114, 2093
PdmI	GAANNNNTTC	1 cut(s)	1463
PfoI	TCCNGGA	1 cut(s)	1151
PinAI	ACCGGT	2 cut(s)	167, 2289
PkrI	GCNGC	6 cut(s)	520, 922, 968, 1453, 1594, 2238
PleI	GAGTC	7 cut(s)	31, 760, 904, 1024, 1769, 1855, 1886
PmaCI	CACGTG	1 cut(s)	2217
PmlI	CACGTG	1 cut(s)	2217
PpsI	GAGTC	7 cut(s)	31, 760, 904, 1024, 1769, 1855, 1886
Ppu21I	YACGTR	1 cut(s)	2217
PpuMI	RGGWCCY	1 cut(s)	54
PscI	ACATGT	1 cut(s)	1479
PshBI	ATTAAT	1 cut(s)	1601
Psp124BI	GAGCTC	2 cut(s)	621, 1943
Psp5II	RGGWCCY	1 cut(s)	54
Psp6I	CCWGG	3 cut(s)	1151, 1541, 1899
PspCI	CACGTG	1 cut(s)	2217
PspFI	CCCAGC	1 cut(s)	1582
PspGI	CCWGG	3 cut(s)	1151, 1541, 1899
PspPI	GGNCC	5 cut(s)	54, 185, 1669, 1770, 2323
PspPPI	RGGWCCY	1 cut(s)	54
PsrI	GAACNNNNNNTAC	2 cut(s)	2279, 2311
PstI	CTGCAG	1 cut(s)	523
PstNI	CAGNNNCTG	2 cut(s)	923, 1414
PsuI	RGATCY	4 cut(s)	76, 214, 601, 730
PvuII	CAGCTG	2 cut(s)	923, 1315
RruI	TCGCGA	1 cut(s)	1800
RseI	CAYNNNNRTG	3 cut(s)	1100, 1568, 2219
Rsr2I	CGGWCCG	1 cut(s)	1770
RsrII	CGGWCCG	1 cut(s)	1770
SacI	GAGCTC	2 cut(s)	621, 1943
SalI	GTCGAC	1 cut(s)	2041
SaqAI	TTAA	4 cut(s)	32, 624, 1601, 2352
SatI	GCNGC	6 cut(s)	519, 921, 967, 1452, 1593, 2237
Sau96I	GGNCC	5 cut(s)	54, 185, 1669, 1770, 2323
SchI	GAGTC	7 cut(s)	31, 761, 905, 1025, 1769, 1856, 1886
SduI	GDGCHC	5 cut(s)	621, 1755, 1943, 1994, 2216
SfaNI	GCATC	8 cut(s)	248, 270, 436, 544, 668, 1215, 1215, 1491
SfcI	CTRYAG	2 cut(s)	519, 915
SfuI	TTCGAA	1 cut(s)	84
SinI	GGWCC	5 cut(s)	54, 185, 1669, 1770, 2323
SmaI	CCCGGG	2 cut(s)	1054, 2328
SmiMI	CAYNNNNRTG	3 cut(s)	1100, 1568, 2219
SmlI	CTYRAG	3 cut(s)	191, 623, 699
SmoI	CTYRAG	3 cut(s)	191, 623, 699
SphI	GCATGC	1 cut(s)	1163
Sse9I	AATT	7 cut(s)	539, 785, 863, 1046, 1289, 1417, 1621
SseBI	AGGCCT	1 cut(s)	1789
SspMI	CTAG	2 cut(s)	878, 1193
SstI	GAGCTC	2 cut(s)	621, 1943
StuI	AGGCCT	1 cut(s)	1789
StyI	CCWWGG	2 cut(s)	60, 843
TaaI	ACNGT	7 cut(s)	164, 694, 803, 953, 1464, 1570, 1796
TaiI	ACGT	7 cut(s)	1218, 1826, 1932, 2087, 2219, 2321, 2381
TaqII	GACCGA	1 cut(s)	754
TasI	AATT	7 cut(s)	539, 785, 863, 1046, 1289, 1417, 1621
TatI	WGTACW	3 cut(s)	1719, 1920, 2346
TauI	GCSGC	2 cut(s)	1454, 1595
Tru1I	TTAA	4 cut(s)	32, 624, 1601, 2352
Tru9I	TTAA	4 cut(s)	32, 624, 1601, 2352
TscAI	CASTG	2 cut(s)	976, 1235
TseFI	GTSAC	3 cut(s)	70, 545, 2228
TseI	GCWGC	4 cut(s)	518, 920, 966, 2236
Tsp45I	GTSAC	3 cut(s)	70, 545, 2228
TspDTI	ATGAA	8 cut(s)	258, 309, 525, 1185, 1709, 1939, 1970, 2189
TspGWI	ACGGA	3 cut(s)	89, 1571, 2060
TspMI	CCCGGG	2 cut(s)	1052, 2326
TspRI	CASTG	2 cut(s)	976, 1235
Vha464I	CTTAAG	1 cut(s)	623
VpaK11BI	GGWCC	5 cut(s)	54, 185, 1669, 1770, 2323
VspI	ATTAAT	1 cut(s)	1601
XapI	RAATTY	5 cut(s)	785, 863, 1046, 1417, 1621
XbaI	TCTAGA	1 cut(s)	877
XceI	RCATGY	2 cut(s)	1163, 1483
XcmI	CCANNNNNNNNNTGG	2 cut(s)	850, 2269
XmaI	CCCGGG	2 cut(s)	1052, 2326
XmiI	GTMKAC	2 cut(s)	1140, 2042
XmnI	GAANNNNTTC	1 cut(s)	1463
XspI	CTAG	2 cut(s)	878, 1193
Zsp2I	ATGCAT	2 cut(s)	263, 1165

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.