Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0002023

Physical Location & Seq

Genomic Coordinates Forward (+)

39764986 .. 39775538

Gene Structure 10553 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g54480.t17

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2097 bp

ATGGCGAATACTCTGATTACAACTAACCACCTGCGGCATGTGGAGTCGATGGCTACAATGCCTTCAGGCGCCGGAAACATTCCTCACTTGAACTCCATCATTCTGGGGGAAGCACTCGCTTCCGAAGAGAATGATCTCATCTTTCCCAGCGACGACTTCTCCCGCCAGGCTCATGTCCCCTCCCCCCAAAAGTATCTGGACATGTATAAAAGGTCCATCGAGGACCCCGCCGGATTTTGGTCGGATTTCGCTTCCGACTTCTTCTGGAAACAGAAATGGGGCCAGCAAGTCTACTTCGAGAATCTCGATGTTAGCAAAGGCGATATCAGGATTGAGTGGTTCAAGGGCGGTCTCACCAATATCTGCTACAATTGCCTCGATAGAAATGTTGAAGCTGGACTTGGTGATCGGGTTGCCTTATACTGGGAAGGCAATGAGCCCTCTCTTGATGGCACTCTAACTTACCTTCAGCTTCTACAAAACGTTTGCCAGCTGGCAAATTATTTGAAAGAGATTGGAGTGAAAAAGGGTGATGCTATCGTGGTCTACTTACCCATGTTAATGGAGCTTCCCATCACAATGCTTGCCTGTGCTCGCATCGGTGCTGTTCACTCGGTTGTATTTGCTGGATTCTCTGCCGAGTCTCTTGCTCAAAGAATTGTAGATTGCAAGCCGAAAGTTGTGATCACCTGCAATGCTGTTAAAAGGGGTTCTAAGATCATCCACCTCAAAGATATAGTTGATGCTGCCCTTAACGAATCAGCCAAAATTGGGGTTTGTGTAGATGTATGCTTAACCTATGAAAATGAATCTGCTTTGAAGAGGCAAAGTACTAAATGGGAAGAAGGAAGAGATATATGGTGGCAGGATGTCATACCTAAGTATCCAACTACTTGTGCAGTGGAGTGGGTTGATGCAGAGGATCCACTTTTTCTGCTCTATACCAGCGGGAGCACTGGGAAGCCCAAGGGAGTTCTGCACACAACTGGAGGATATATGGTGTACACTGCTACAACATTTAAATATGCATTTGATTACAAACCATCTGACATCTACTGGTGCACAGCTGACTGTGGTTGGATCACTGGGCACAGCTATGTCACTTATGGACCTCTGCTAAATGGAGCAACTGTTGTCATATATGAAGGGGCACCAAATTATCCTGACGCTGGACGCTGTTGGGATATTGTTGATAAATACAAAGTGACCATCTTTTATACTGCCCCCACATTGGTGAGGTCTCTAATGCGCGATGGTGATGAGTATGTCAAGCGATACTCGCGAAAATCATTAAGGGTCCTTGGAAGCGTAGGCGAGCCTATTAATCCAAGTGCATGGAGGTGGTTTTTCAATGTGGTTGGAGATTCAAGATGTCCCATTTCTGACACTTGGTGGCAAACTGAAACTGGTGGCTTTATGATGACTCCATTACCCGGTGCCTGGCCACAGAAGCCTGGTTCTGCCACTTTCCCTTTTTTTGGAGTTCAGGCTGTCATTGTGGATGAGAAGGGTGTTGAAATTGAAGGGGAGTGCAGTGGTTATCTGTGTATAAAAAGCTCTTGGCCTGGAGCATTCCGAACTCTTTATGGTGATCATGAAAGATATGAAACAACTTACTTTAAACCTTTCTCTGGGTATTATTTTAGTGGTGATGGATGCAGGAGGGACAAAGATGGATATCACTGGCTTACAGGAAGGGTTGACGATGTCATCAATGTCAGTGGACATCGTATTGGTACTGCAGAAGTTGAATCTGCTCTTGTTTCGCATCCTCAGTGTGCAGAAGCTGCTGTGGTTGGTGTGGAACATGAGGTTAAAGGACAAGGTATATATGCCTTTGTTACTCTTGTTGATGGTGTACCTTACAGTGAAGATCTCCGGAAAAGCCTTATTATGATTGTCAGAAAGCAGATAGGGGCATTTGCAGCACCAGACCGAATCCACTGGGCACCTGGCCTTCCAAAGACAAGGAGTGGGAAGATAATGAGGAGAATTCTCAGGAAAATTGCTTCAAAACAGCTAGACGAGCTTGGTGACACTAGCACACTTGCAGATCCAAATGTGGTTGATCAACTAATTGCTCTCGCAGATTCGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003987 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0005829 GO:0006082 GO:0006083 GO:0008150 GO:0008152 GO:0009507 GO:0009514 GO:0009532 GO:0009536 GO:0009570 GO:0009987 GO:0016405 GO:0016874 GO:0016877 GO:0016878 GO:0016999 GO:0017144 GO:0019752 GO:0032787 GO:0042579 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0071704

KEGG Pathways

Metabolic & Signaling

ko00010 ko00620 ko00640 ko00680 ko00720 ko01100 ko01110 ko01120 ko01130 ko01200 map00010 map00620 map00640 map00680 map00720 map01100 map01110 map01120 map01130 map01200

Pfam Domains

Protein Families

ACAS_N AMP-binding AMP-binding_C

Protein Analysis

699

Amino Acids

77.86

Weight (kDa)

5.64

Isoelectric Point (pI)

30.61

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ACAS_N	PF16177	126 - 186	8.7e-18	Acetyl-coenzyme A synthetase N-terminus
AMP-binding	PF00501	195 - 581	1e-92	AMP-binding enzyme
AMP-binding_C	PF13193	643 - 721	9.9e-25	AMP-binding enzyme C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0002023)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G36880 AT5G36880 AT5G36880 AT5G36880 AT5G36880 AT5G36880
fragaria_vesca	FvH4_6g54480 FvH4_6g54480 FvH4_6g54480 FvH4_6g54480 FvH4_6g54480 FvH4_6g54480 FvH4_6g54480 FvH4_6g54480 FvH4_6g54480 FvH4_6g54480 FvH4_6g54480 FvH4_6g54480 FvH4_6g54480 FvH4_6g54480 FvH4_6g54480 FvH4_6g54480 FvH4_6g54480 FvH4_6g54480
malus_domestica	MD09G1000400.v1.1 MD17G1003300.v1.1
prunus_persica	Prupe.3G315800_v2.0.a1
pyrus_communis	pycom111g00030 pycom17g00010
rosa_chinensis	RchiOBHm_Chr2g0176771
rosa_multiflora	Rmu_sc0020992.1_g000001
rosa_roxburghii	Rroxscaffold_2G00076170
rosa_rugosa	Rorug02G0598400 Rorug02G0598500 Rorug02G0598600 Rorug02G0598700 Rorug02G0598800 Rorug02G0598900 Rorug02G0599000 Rorug02G0599100 Rorug02G0599200
rosa_samantha	Rh2AG676000 Rh2BG687100 Rh2CG650500
rosa_wichuraiana	Rw2G055470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	39, 698
Acc36I	ACCTGC	2 cut(s)	39, 698
AccB1I	GGYRCC	4 cut(s)	68, 1150, 1436, 1948
AccI	GTMKAC	2 cut(s)	291, 546
AccII	CGCG	2 cut(s)	1251, 1282
AccIII	TCCGGA	1 cut(s)	1878
AciI	CCGC	5 cut(s)	34, 163, 228, 348, 948
AclI	AACGTT	1 cut(s)	483
AclWI	GGATC	4 cut(s)	917, 930, 1088, 2048
AcoI	YGGCCR	1 cut(s)	1442
AcsI	RAATTY	1 cut(s)	1992
AcuI	CTGAAG	2 cut(s)	48, 452
AcyI	GRCGYC	1 cut(s)	69
AdeI	CACNNNGTG	1 cut(s)	1392
AfaI	GTAC	4 cut(s)	832, 1004, 1738, 1860
AfiI	CCNNNNNNNGG	9 cut(s)	237, 423, 771, 1169, 1231, 1433, 1440, 1478, 1631
AflIII	ACRYGT	1 cut(s)	201
AjnI	CCWGG	5 cut(s)	165, 1439, 1453, 1564, 1951
AjuI	GAANNNNNNNTTGG	2 cut(s)	384, 416
AleI	CACNNNNGTG	1 cut(s)	1232
Alw21I	GWGCWC	3 cut(s)	595, 956, 1064
Alw26I	GTCTC	3 cut(s)	356, 648, 1245
Alw44I	GTGCAC	1 cut(s)	1060
AlwI	GGATC	4 cut(s)	917, 930, 1088, 2048
AlwNI	CAGNNNCTG	1 cut(s)	1787
Aor13HI	TCCGGA	1 cut(s)	1878
AoxI	GGCC	4 cut(s)	280, 1442, 1562, 1954
ApaLI	GTGCAC	1 cut(s)	1060
ApeKI	GCWGC	3 cut(s)	746, 1787, 1925
ApoI	RAATTY	1 cut(s)	1992
AseI	ATTAAT	1 cut(s)	1323
AspLEI	GCGC	2 cut(s)	71, 1251
AspS9I	GGNCC	5 cut(s)	213, 223, 280, 1109, 1297
AsuC2I	CCSGG	1 cut(s)	1434
AsuHPI	GGTGA	9 cut(s)	346, 416, 542, 679, 1246, 1268, 1601, 1661, 2045
AvaII	GGWCC	4 cut(s)	213, 223, 1109, 1297
BaeGI	GKGCMC	4 cut(s)	1064, 1092, 1153, 1951
BaeI	ACNNNNGTAYC	2 cut(s)	866, 899
BalI	TGGCCA	1 cut(s)	1444
BamHI	GGATCC	1 cut(s)	922
BanI	GGYRCC	4 cut(s)	68, 1150, 1436, 1948
BanII	GRGCYC	1 cut(s)	441
Bbv12I	GWGCWC	3 cut(s)	595, 956, 1064
BbvI	GCAGC	3 cut(s)	733, 1774, 1937
BcgI	CGANNNNNNTGC	2 cut(s)	629, 663
BciT130I	CCWGG	5 cut(s)	167, 1441, 1455, 1566, 1953
BciVI	GTATCC	1 cut(s)	894
BclI	TGATCA	3 cut(s)	684, 1591, 2068
BcnI	CCSGG	1 cut(s)	1434
BcoDI	GTCTC	3 cut(s)	356, 648, 1245
BfaI	CTAG	2 cut(s)	2021, 2040
BfmI	CTRYAG	1 cut(s)	1740
BfoI	RGCGCY	1 cut(s)	72
BfuAI	ACCTGC	2 cut(s)	39, 698
BfuI	GTATCC	1 cut(s)	894
BglII	AGATCT	1 cut(s)	1873
BisI	GCNGC	4 cut(s)	35, 747, 1788, 1926
BlsI	GCNGC	4 cut(s)	36, 748, 1789, 1927
BmcAI	AGTACT	1 cut(s)	832
Bme1390I	CCNGG	6 cut(s)	167, 1434, 1441, 1455, 1566, 1953
Bme18I	GGWCC	4 cut(s)	213, 223, 1109, 1297
BmgT120I	GGNCC	5 cut(s)	213, 223, 280, 1109, 1297
BmiI	GGNNCC	8 cut(s)	70, 225, 281, 924, 1152, 1298, 1438, 1950
BmrFI	CCNGG	6 cut(s)	167, 1434, 1441, 1455, 1566, 1953
BmrI	ACTGGG	4 cut(s)	433, 966, 1095, 1954
BmsI	GCATC	6 cut(s)	523, 606, 733, 904, 1646, 1777
BmuI	ACTGGG	4 cut(s)	433, 966, 1095, 1954
BpmI	CTGGAG	2 cut(s)	1008, 1587
BpuMI	CCSGG	1 cut(s)	1434
BsaBI	GATNNNNATC	1 cut(s)	1677
BsaHI	GRCGYC	1 cut(s)	69
BsaI	GGTCTC	2 cut(s)	356, 1245
BsaJI	CCNNGG	2 cut(s)	966, 1300
BsaWI	WCCGGW	1 cut(s)	1878
BsaXI	ACNNNNNCTCC	6 cut(s)	77, 107, 143, 173, 1116, 1146
Bsc4I	CCNNNNNNNGG	9 cut(s)	237, 423, 771, 1169, 1231, 1433, 1440, 1478, 1631
Bse1I	ACTGG	8 cut(s)	428, 961, 991, 1061, 1090, 1411, 1688, 1949
Bse3DI	GCAATG	2 cut(s)	439, 700
Bse8I	GATNNNNATC	1 cut(s)	1677
BseAI	TCCGGA	1 cut(s)	1878
BseBI	CCWGG	5 cut(s)	167, 1441, 1455, 1566, 1953
BseDI	CCNNGG	2 cut(s)	966, 1300
BseGI	GGATG	5 cut(s)	720, 874, 1507, 1661, 1768
BseJI	GATNNNNATC	1 cut(s)	1677
BseLI	CCNNNNNNNGG	9 cut(s)	237, 423, 771, 1169, 1231, 1433, 1440, 1478, 1631
BseMI	GCAATG	2 cut(s)	439, 700
BseMII	CTCAG	2 cut(s)	1787, 2011
BseNI	ACTGG	8 cut(s)	428, 961, 991, 1061, 1090, 1411, 1688, 1949
BseRI	GAGGAG	1 cut(s)	2002
BseSI	GKGCMC	4 cut(s)	1064, 1092, 1153, 1951
BseXI	GCAGC	3 cut(s)	733, 1774, 1937
BseYI	CCCAGC	1 cut(s)	146
BsgI	GTGCAG	4 cut(s)	918, 962, 1552, 1800
Bsh1236I	CGCG	2 cut(s)	1251, 1282
BshFI	GGCC	4 cut(s)	282, 1444, 1564, 1956
BshNI	GGYRCC	4 cut(s)	68, 1150, 1436, 1948
BsiHKAI	GWGCWC	3 cut(s)	595, 956, 1064
BsiSI	CCGG	4 cut(s)	72, 231, 1434, 1879
BslFI	GGGAC	3 cut(s)	161, 1359, 1679
BslI	CCNNNNNNNGG	9 cut(s)	237, 423, 771, 1169, 1231, 1433, 1440, 1478, 1631
BsmAI	GTCTC	3 cut(s)	356, 648, 1245
BsmFI	GGGAC	3 cut(s)	161, 1359, 1679
BsmI	GAATGC	1 cut(s)	1571
BsnI	GGCC	4 cut(s)	282, 1444, 1564, 1956
Bso31I	GGTCTC	2 cut(s)	356, 1245
Bsp1286I	GDGCHC	7 cut(s)	441, 595, 956, 1064, 1092, 1153, 1951
Bsp13I	TCCGGA	1 cut(s)	1878
Bsp1407I	TGTACA	1 cut(s)	1002
Bsp68I	TCGCGA	1 cut(s)	1282
BspACI	CCGC	5 cut(s)	34, 163, 228, 348, 948
BspANI	GGCC	4 cut(s)	282, 1444, 1564, 1956
BspCNI	CTCAG	2 cut(s)	1786, 2010
BspEI	TCCGGA	1 cut(s)	1878
BspFNI	CGCG	2 cut(s)	1251, 1282
BspHI	TCATGA	1 cut(s)	1594
BspLI	GGNNCC	8 cut(s)	70, 225, 281, 924, 1152, 1298, 1438, 1950
BspMAI	CTGCAG	1 cut(s)	1744
BspMI	ACCTGC	2 cut(s)	39, 698
BspPI	GGATC	4 cut(s)	917, 930, 1088, 2048
BspT107I	GGYRCC	4 cut(s)	68, 1150, 1436, 1948
BspTNI	GGTCTC	2 cut(s)	356, 1245
BsrDI	GCAATG	2 cut(s)	439, 700
BsrGI	TGTACA	1 cut(s)	1002
BsrI	ACTGG	8 cut(s)	428, 961, 991, 1061, 1090, 1411, 1688, 1949
BssECI	CCNNGG	2 cut(s)	966, 1300
BssNI	GRCGYC	1 cut(s)	69
BssT1I	CCWWGG	2 cut(s)	966, 1300
Bst2UI	CCWGG	5 cut(s)	167, 1441, 1455, 1566, 1953
Bst4CI	ACNGT	3 cut(s)	1073, 1132, 1868
Bst6I	CTCTTC	3 cut(s)	120, 815, 844
BstACI	GRCGYC	1 cut(s)	69
BstAPI	GCANNNNNTGC	1 cut(s)	1787
BstAUI	TGTACA	1 cut(s)	1002
BstC8I	GCNNGC	7 cut(s)	284, 491, 495, 585, 595, 671, 1316
BstDEI	CTNAG	4 cut(s)	714, 879, 1773, 1997
BstF5I	GGATG	5 cut(s)	720, 874, 1507, 1661, 1768
BstFNI	CGCG	2 cut(s)	1251, 1282
BstH2I	RGCGCY	1 cut(s)	72
BstHHI	GCGC	2 cut(s)	71, 1251
BstMAI	GTCTC	3 cut(s)	356, 648, 1245
BstMWI	GCNNNNNNNGC	6 cut(s)	372, 1279, 1450, 1787, 1925, 2026
BstNI	CCWGG	5 cut(s)	167, 1441, 1455, 1566, 1953
BstNSI	RCATGY	2 cut(s)	41, 205
BstSCI	CCNGG	6 cut(s)	165, 1432, 1439, 1453, 1564, 1951
BstSFI	CTRYAG	1 cut(s)	1740
BstSLI	GKGCMC	4 cut(s)	1064, 1092, 1153, 1951
BstUI	CGCG	2 cut(s)	1251, 1282
BstV1I	GCAGC	3 cut(s)	733, 1774, 1937
BstX2I	RGATCY	3 cut(s)	922, 1873, 2053
BstXI	CCANNNNNNTGG	3 cut(s)	103, 562, 1335
BstYI	RGATCY	3 cut(s)	922, 1873, 2053
BsuI	GTATCC	1 cut(s)	894
BsuRI	GGCC	4 cut(s)	282, 1444, 1564, 1956
BtgZI	GCGATG	1 cut(s)	1266
BtsCI	GGATG	5 cut(s)	720, 874, 1507, 1661, 1768
BtsI	GCAGTG	3 cut(s)	906, 1005, 1540
BtuMI	TCGCGA	1 cut(s)	1282
BveI	ACCTGC	2 cut(s)	39, 698
Cac8I	GCNNGC	7 cut(s)	284, 491, 495, 585, 595, 671, 1316
CaiI	CAGNNNCTG	1 cut(s)	1787
CciI	TCATGA	1 cut(s)	1594
CfoI	GCGC	2 cut(s)	71, 1251
Cfr13I	GGNCC	5 cut(s)	213, 223, 280, 1109, 1297
CseI	GACGC	2 cut(s)	1175, 1182
Csp6I	GTAC	4 cut(s)	831, 1003, 1737, 1859
CspCI	CAANNNNNGTGG	2 cut(s)	1702, 1737
CviAII	CATG	7 cut(s)	38, 173, 202, 556, 1335, 1595, 1808
CviQI	GTAC	4 cut(s)	831, 1003, 1737, 1859
DdeI	CTNAG	4 cut(s)	714, 879, 1773, 1997
DinI	GGCGCC	1 cut(s)	70
DraI	TTTAAA	2 cut(s)	1021, 1621
DraIII	CACNNNGTG	1 cut(s)	1392
EaeI	YGGCCR	1 cut(s)	1442
Eam1104I	CTCTTC	3 cut(s)	120, 815, 844
EarI	CTCTTC	3 cut(s)	120, 815, 844
Eco130I	CCWWGG	2 cut(s)	966, 1300
Eco24I	GRGCYC	1 cut(s)	441
Eco31I	GGTCTC	2 cut(s)	356, 1245
Eco32I	GATATC	2 cut(s)	325, 1679
Eco47I	GGWCC	4 cut(s)	213, 223, 1109, 1297
Eco57I	CTGAAG	2 cut(s)	48, 452
EcoO109I	RGGNCCY	2 cut(s)	223, 1297
EcoRI	GAATTC	1 cut(s)	1992
EcoRII	CCWGG	5 cut(s)	165, 1439, 1453, 1564, 1951
EcoRV	GATATC	2 cut(s)	325, 1679
EcoT14I	CCWWGG	2 cut(s)	966, 1300
EcoT22I	ATGCAT	1 cut(s)	1030
EcoT38I	GRGCYC	1 cut(s)	441
EgeI	GGCGCC	1 cut(s)	70
EheI	GGCGCC	1 cut(s)	70
ErhI	CCWWGG	2 cut(s)	966, 1300
FaeI	CATG	7 cut(s)	41, 176, 205, 559, 1338, 1598, 1811
FalI	AAGNNNNNCTT	2 cut(s)	384, 416
FaqI	GGGAC	3 cut(s)	161, 1359, 1679
FatI	CATG	7 cut(s)	37, 172, 201, 555, 1334, 1594, 1807
FauI	CCCGC	3 cut(s)	170, 235, 941
FbaI	TGATCA	3 cut(s)	684, 1591, 2068
FblI	GTMKAC	2 cut(s)	291, 546
Fnu4HI	GCNGC	4 cut(s)	35, 747, 1788, 1926
FokI	GGATG	5 cut(s)	707, 881, 1514, 1668, 1755
FriOI	GRGCYC	1 cut(s)	441
Fsp4HI	GCNGC	4 cut(s)	35, 747, 1788, 1926
FspBI	CTAG	2 cut(s)	2021, 2040
GlaI	GCGC	2 cut(s)	70, 1250
GluI	GCNGC	4 cut(s)	35, 747, 1788, 1926
GsaI	CCCAGC	1 cut(s)	150
GsuI	CTGGAG	2 cut(s)	1008, 1587
HaeII	RGCGCY	1 cut(s)	72
HaeIII	GGCC	4 cut(s)	282, 1444, 1564, 1956
HapII	CCGG	4 cut(s)	72, 231, 1434, 1879
HgaI	GACGC	2 cut(s)	1175, 1182
HhaI	GCGC	2 cut(s)	71, 1251
Hin1I	GRCGYC	1 cut(s)	69
Hin1II	CATG	7 cut(s)	41, 176, 205, 559, 1338, 1598, 1811
Hin6I	GCGC	2 cut(s)	69, 1249
HinP1I	GCGC	2 cut(s)	69, 1249
HincII	GTYRAC	1 cut(s)	1702
HindII	GTYRAC	1 cut(s)	1702
HpaII	CCGG	4 cut(s)	72, 231, 1434, 1879
HphI	GGTGA	9 cut(s)	346, 416, 542, 679, 1246, 1268, 1601, 1661, 2045
Hpy166II	GTNNAC	9 cut(s)	292, 547, 610, 1003, 1005, 1062, 1702, 1724, 1859
Hpy188I	TCNGA	8 cut(s)	15, 124, 244, 256, 1048, 1384, 1577, 1904
Hpy8I	GTNNAC	9 cut(s)	292, 547, 610, 1003, 1005, 1062, 1702, 1724, 1859
Hpy99I	CGWCG	1 cut(s)	155
HpyAV	CCTTC	9 cut(s)	72, 422, 476, 839, 1139, 1501, 1517, 1689, 1967
HpyCH4III	ACNGT	3 cut(s)	1073, 1132, 1868
HpyCH4IV	ACGT	1 cut(s)	483
HpyF10VI	GCNNNNNNNGC	6 cut(s)	372, 1279, 1450, 1787, 1925, 2026
HpyF3I	CTNAG	4 cut(s)	714, 879, 1773, 1997
HpySE526I	ACGT	1 cut(s)	483
Hsp92I	GRCGYC	1 cut(s)	69
Hsp92II	CATG	7 cut(s)	41, 176, 205, 559, 1338, 1598, 1811
HspAI	GCGC	2 cut(s)	69, 1249
KasI	GGCGCC	1 cut(s)	68
Kpn2I	TCCGGA	1 cut(s)	1878
Ksp22I	TGATCA	3 cut(s)	684, 1591, 2068
LmnI	GCTCC	4 cut(s)	565, 951, 1124, 1568
Lsp1109I	GCAGC	3 cut(s)	733, 1774, 1937
LweI	GCATC	6 cut(s)	523, 606, 733, 904, 1646, 1777
MaeI	CTAG	2 cut(s)	2021, 2040
MaeII	ACGT	1 cut(s)	483
MaeIII	GTNAC	4 cut(s)	1099, 1204, 1840, 2033
MboII	GAAGA	7 cut(s)	137, 253, 832, 854, 861, 1883, 1990
MfeI	CAATTG	1 cut(s)	370
MflI	RGATCY	3 cut(s)	922, 1873, 2053
MhlI	GDGCHC	7 cut(s)	441, 595, 956, 1064, 1092, 1153, 1951
MlsI	TGGCCA	1 cut(s)	1444
MluCI	AATT	9 cut(s)	370, 499, 657, 768, 1156, 1518, 1992, 2004, 2076
MluNI	TGGCCA	1 cut(s)	1444
Mly113I	GGCGCC	1 cut(s)	69
MlyI	GAGTC	3 cut(s)	53, 650, 1417
MmeI	TCCRAC	5 cut(s)	222, 279, 911, 1058, 1339
Mox20I	TGGCCA	1 cut(s)	1444
Mph1103I	ATGCAT	1 cut(s)	1030
MroI	TCCGGA	1 cut(s)	1878
MscI	TGGCCA	1 cut(s)	1444
MseI	TTAA	9 cut(s)	560, 702, 753, 794, 1020, 1292, 1323, 1620, 1815
MslI	CAYNNNNRTG	5 cut(s)	560, 578, 1095, 1232, 1339
Msp20I	TGGCCA	1 cut(s)	1444
MspA1I	CMGCKG	3 cut(s)	493, 948, 1067
MspI	CCGG	4 cut(s)	72, 231, 1434, 1879
MspR9I	CCNGG	6 cut(s)	167, 1434, 1441, 1455, 1566, 1953
MunI	CAATTG	1 cut(s)	370
Mva1269I	GAATGC	1 cut(s)	1571
MvaI	CCWGG	5 cut(s)	167, 1441, 1455, 1566, 1953
MvnI	CGCG	2 cut(s)	1251, 1282
MwoI	GCNNNNNNNGC	6 cut(s)	372, 1279, 1450, 1787, 1925, 2026
NarI	GGCGCC	1 cut(s)	69
NciI	CCSGG	1 cut(s)	1434
NlaIII	CATG	7 cut(s)	41, 176, 205, 559, 1338, 1598, 1811
NlaIV	GGNNCC	8 cut(s)	70, 225, 281, 924, 1152, 1298, 1438, 1950
NmeAIII	GCCGAG	1 cut(s)	664
NmuCI	GTSAC	3 cut(s)	1099, 1204, 2033
NruI	TCGCGA	1 cut(s)	1282
NsiI	ATGCAT	1 cut(s)	1030
NspI	RCATGY	2 cut(s)	41, 205
OliI	CACNNNNGTG	1 cut(s)	1232
PagI	TCATGA	1 cut(s)	1594
PaqCI	CACCTGC	2 cut(s)	39, 698
PciI	ACATGT	1 cut(s)	201
PcsI	WCGNNNNNNNCGW	1 cut(s)	303
PctI	GAATGC	1 cut(s)	1571
PfeI	GAWTC	8 cut(s)	301, 630, 758, 809, 1364, 1751, 1938, 2090
PflFI	GACNNNGTC	1 cut(s)	1706
PkrI	GCNGC	4 cut(s)	36, 748, 1789, 1927
PleI	GAGTC	3 cut(s)	52, 649, 1417
PluTI	GGCGCC	1 cut(s)	72
PpsI	GAGTC	3 cut(s)	52, 649, 1417
PpuMI	RGGWCCY	2 cut(s)	223, 1297
PscI	ACATGT	1 cut(s)	201
PshBI	ATTAAT	1 cut(s)	1323
Psp1406I	AACGTT	1 cut(s)	483
Psp5II	RGGWCCY	2 cut(s)	223, 1297
Psp6I	CCWGG	5 cut(s)	165, 1439, 1453, 1564, 1951
PspFI	CCCAGC	1 cut(s)	146
PspGI	CCWGG	5 cut(s)	165, 1439, 1453, 1564, 1951
PspN4I	GGNNCC	8 cut(s)	70, 225, 281, 924, 1152, 1298, 1438, 1950
PspPI	GGNCC	5 cut(s)	213, 223, 280, 1109, 1297
PspPPI	RGGWCCY	2 cut(s)	223, 1297
PstI	CTGCAG	1 cut(s)	1744
PstNI	CAGNNNCTG	1 cut(s)	1787
PsuI	RGATCY	3 cut(s)	922, 1873, 2053
PsyI	GACNNNGTC	1 cut(s)	1706
PvuII	CAGCTG	2 cut(s)	493, 1067
RruI	TCGCGA	1 cut(s)	1282
RsaI	GTAC	4 cut(s)	832, 1004, 1738, 1860
RsaNI	GTAC	4 cut(s)	831, 1003, 1737, 1859
RseI	CAYNNNNRTG	5 cut(s)	560, 578, 1095, 1232, 1339
SaqAI	TTAA	9 cut(s)	560, 702, 753, 794, 1020, 1292, 1323, 1620, 1815
SatI	GCNGC	4 cut(s)	35, 747, 1788, 1926
Sau96I	GGNCC	5 cut(s)	213, 223, 280, 1109, 1297
ScaI	AGTACT	1 cut(s)	832
SchI	GAGTC	3 cut(s)	53, 650, 1417
ScrFI	CCNGG	6 cut(s)	167, 1434, 1441, 1455, 1566, 1953
SduI	GDGCHC	7 cut(s)	441, 595, 956, 1064, 1092, 1153, 1951
SfaNI	GCATC	6 cut(s)	523, 606, 733, 904, 1646, 1777
SfcI	CTRYAG	1 cut(s)	1740
SfoI	GGCGCC	1 cut(s)	70
SinI	GGWCC	4 cut(s)	213, 223, 1109, 1297
SmiI	ATTTAAAT	1 cut(s)	1021
SmiMI	CAYNNNNRTG	5 cut(s)	560, 578, 1095, 1232, 1339
Sse9I	AATT	9 cut(s)	370, 499, 657, 768, 1156, 1518, 1992, 2004, 2076
SsiI	CCGC	5 cut(s)	34, 163, 228, 348, 948
SspDI	GGCGCC	1 cut(s)	68
SspMI	CTAG	2 cut(s)	2021, 2040
StyD4I	CCNGG	6 cut(s)	165, 1432, 1439, 1453, 1564, 1951
StyI	CCWWGG	2 cut(s)	966, 1300
SwaI	ATTTAAAT	1 cut(s)	1021
TaaI	ACNGT	3 cut(s)	1073, 1132, 1868
TaiI	ACGT	1 cut(s)	486
TaqI	TCGA	5 cut(s)	47, 219, 297, 306, 378
TaqII	GACCGA	1 cut(s)	1950
TasI	AATT	9 cut(s)	370, 499, 657, 768, 1156, 1518, 1992, 2004, 2076
TatI	WGTACW	2 cut(s)	830, 1002
TauI	GCSGC	1 cut(s)	37
TfiI	GAWTC	8 cut(s)	301, 630, 758, 809, 1364, 1751, 1938, 2090
Tru1I	TTAA	9 cut(s)	560, 702, 753, 794, 1020, 1292, 1323, 1620, 1815
Tru9I	TTAA	9 cut(s)	560, 702, 753, 794, 1020, 1292, 1323, 1620, 1815
TseFI	GTSAC	3 cut(s)	1099, 1204, 2033
TseI	GCWGC	3 cut(s)	746, 1787, 1925
Tsp45I	GTSAC	3 cut(s)	1099, 1204, 2033
TspDTI	ATGAA	5 cut(s)	816, 822, 1158, 1611, 1620
Tth111I	GACNNNGTC	1 cut(s)	1706
VneI	GTGCAC	1 cut(s)	1060
VpaK11BI	GGWCC	4 cut(s)	213, 223, 1109, 1297
VspI	ATTAAT	1 cut(s)	1323
XapI	RAATTY	1 cut(s)	1992
XceI	RCATGY	2 cut(s)	41, 205
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1949
XmiI	GTMKAC	2 cut(s)	291, 546
XspI	CTAG	2 cut(s)	2021, 2040
ZrmI	AGTACT	1 cut(s)	832
Zsp2I	ATGCAT	1 cut(s)	1030

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.