Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0002023

Physical Location & Seq

Genomic Coordinates Forward (+)

82854577 .. 82863299

Gene Structure 8723 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G055470.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2166 bp

ATGTCCAATTCAATGGGACATCAGCTTCAAGTTCTCAGCAGCAGTCAAAAGGTGATCTGGAATAGGGAAATGGCCCATAATCTGATCACAACTAATCACCTGCGGCATGTAGAGTCGATGGCCACAATGCCTTCTGGCGCCGGAAACATTCCCCACTTGAACGCAATCATTCTGGGTGAAGCACTCGCTTCTGAAGAGAATGATCTCATCTTTCCCAGCGACGACTTCTCCCGCCAGGCTCACGTCCCCTCTCCCCAGAAGTATCTGGAGATGTATAAAAGGTCCATCGAGGACCCCGCCGGATTTTGGTCGGATTTCGCTTCCGACTTCTTTTGGAAACAGAGATGGGGCGAACAAGTCTACTTCGAGAATCTCGATGTTAGCAAAGGCGATATCAGGATTGAGTGGTTCAAGGGCGGTCTCACCAATATCTGCTACAATTGCCTTGATAGAAATGTTGAAGCTGGACTTGGTGACCGAATTGCCTTGTACTGGGAAGGCAATGAGCCCTGTCTTGATGGCTCTTTAACTTACATTCAGCTTCTACAAAACGTTTGCCAGCTTGCAAACTACTTGAAAGATATTGGAGTGAAAAAGGGCGATGCTGTTGTGGTTTACTTACCCATGTTAATGGAACTTCCAATCACAATGCTTGCCTGTGCTCGCATTGGTGCTGTTCACTCGGTTGTATTTGCTGGATTTTCTGTCGAATCTCTTGCTCAAAGAGTAGTAGATTGCAAGCCGAAAGTTGTGATCACTTGCAATGCTGTTAAAAGGGGTTCTAAGGTTATCCACCTCAAAGATATAGTTGATGCTGCCCTTATCGAATCAGCCAAAAGTGGGGTTTGTGTAGATGTATGCTTAACTTATGAGAATGAATCTGCTTTGAAGAGGGGAAGTACTAAATGGGAAGAAGGAAGAGATATATGGTGGCAGGATGTCATACCTAAATATCCAACTACTTGTGCAGTGGAGTGGGTTGATGCAGAGGATCCACTTTTTCTGCTCTATACCAGTGGGAGCACTGGGAAGCCCAAGGGAGTGCTGCACACAACTGGAGGATATATGGTGTACACTGCTACAACATTTAAATATGCTTTTGATTACAAACCATCCGACATCTACTGGTGTACAGCTGACTGTGGTTGGATCACTGGGCACAGCTATGTCACTTATGGACCTCTGCTAAATGGAGCAACTGTTGTCATATATGAAGGGGCACCAAATTATCCTGACCCTGGACGCTGTTGGGATATTGTTGATAAATACAAAGTGACCATCTTTTATACTGCCCCCACATTGGTGCGGTCTCTCATGCGTGATGGTGATGAGTATGTCAAGCGATACTCGCGAAAATCATTACGGGTCCTTGGAAGTGTAGGCGAGCCTATTAATCCAAGTGCATGGAGGTGGTTTTTCAATGTGGTTGGAGATTCAAGATGTCCCATTTCTGACACTTGGTGGCAAACTGAAACTGGTGGCTTTATGATGACTCCATTACCTGGTGCCTGGCCACAGAAGCCTGGTTCTGCCACTTTCCCCTTTTTTGGAGTTCAGGCGGTCATTGTGGATGAGAAGGGCGTTGAAATTGAAGGCGAGTGCAGTGGTTATCTGTGTATAAAAAGCTCATGGCCTGGAGCATTCCGAACTCTTTATGGTGATCATGAAAGATATGAAACAACTTACTTTAAACCTTTCTCTGGGTATTATTTTAGTGGTGATGGATGCAGCAGGGACAAAGATGGATATCACTGGCTTACAGGAAGGGTTGATGATGTCATCAATGTTAGTGGACATCGTATCGGTACCGCAGAAGTTGAATCTGCTCTTGTATCGCATCCTCAGTGTGCAGAAGCTGCTGTGGTTGGTGTAGAGCATGAGGTTAAGGGACAAGGTATATATGCCTTTGTTACTCTTGTGGACGGAGTACCTTACAGTGAAGATCTCCGGAAAAGCCTTATTCTTATTGTCCGAAAGCAGATAGGGGCATTTGCAGCACCGGACAGAATCCACTGGGCACCTGGCCTTCCAAAGACAAGGAGTGGGAAGATAATGAGGAGAATTCTGAGGAAAATTGCTTCAAAACAGCTAGATGAGCTTGGTGACACTAGCACACTTGCAGATCCAAATGTGGTCGATCAACTTATTGCTCTCGCAGATACGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003987 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0005829 GO:0006082 GO:0006083 GO:0008150 GO:0008152 GO:0009507 GO:0009514 GO:0009532 GO:0009536 GO:0009570 GO:0009987 GO:0016405 GO:0016874 GO:0016877 GO:0016878 GO:0016999 GO:0017144 GO:0019752 GO:0032787 GO:0042579 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0071704

KEGG Pathways

Metabolic & Signaling

ko00010 ko00620 ko00640 ko00680 ko00720 ko01100 ko01110 ko01120 ko01130 ko01200 map00010 map00620 map00640 map00680 map00720 map01100 map01110 map01120 map01130 map01200

Pfam Domains

Protein Families

ACAS_N AMP-binding AMP-binding_C

Protein Analysis

721

Amino Acids

80.41

Weight (kDa)

5.67

Isoelectric Point (pI)

31.31

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ACAS_N	PF16177	88 - 148	1.5e-17	Acetyl-coenzyme A synthetase N-terminus
AMP-binding	PF00501	158 - 543	2.6e-92	AMP-binding enzyme
AMP-binding_C	PF13193	605 - 683	2.3e-24	AMP-binding enzyme C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002023)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G36880 AT5G36880 AT5G36880 AT5G36880 AT5G36880 AT5G36880
fragaria_vesca	FvH4_6g54480 FvH4_6g54480 FvH4_6g54480 FvH4_6g54480 FvH4_6g54480 FvH4_6g54480 FvH4_6g54480 FvH4_6g54480 FvH4_6g54480 FvH4_6g54480 FvH4_6g54480 FvH4_6g54480 FvH4_6g54480 FvH4_6g54480 FvH4_6g54480 FvH4_6g54480 FvH4_6g54480 FvH4_6g54480
malus_domestica	MD09G1000400.v1.1 MD17G1003300.v1.1
prunus_persica	Prupe.3G315800_v2.0.a1
pyrus_communis	pycom111g00030 pycom17g00010
rosa_chinensis	RchiOBHm_Chr2g0176771
rosa_multiflora	Rmu_sc0020992.1_g000001
rosa_roxburghii	Rroxscaffold_2G00076170
rosa_rugosa	Rorug02G0598400 Rorug02G0598500 Rorug02G0598600 Rorug02G0598700 Rorug02G0598800 Rorug02G0598900 Rorug02G0599000 Rorug02G0599100 Rorug02G0599200
rosa_samantha	Rh2AG676000 Rh2BG687100 Rh2CG650500
rosa_wichuraiana	Rw2G055470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	108
Acc36I	ACCTGC	1 cut(s)	108
Acc65I	GGTACC	1 cut(s)	1805
AccB1I	GGYRCC	5 cut(s)	137, 1219, 1505, 1805, 2017
AccB7I	CCANNNNNTGG	1 cut(s)	1502
AccI	GTMKAC	1 cut(s)	360
AccII	CGCG	1 cut(s)	1351
AccIII	TCCGGA	1 cut(s)	1947
AciI	CCGC	7 cut(s)	103, 232, 297, 417, 1306, 1559, 1809
AclI	AACGTT	1 cut(s)	552
AclWI	GGATC	4 cut(s)	986, 999, 1157, 2117
AcoI	YGGCCR	2 cut(s)	120, 1511
AcsI	RAATTY	1 cut(s)	2061
AcuI	CTGAAG	1 cut(s)	213
AcyI	GRCGYC	1 cut(s)	138
AdeI	CACNNNGTG	1 cut(s)	1461
AfaI	GTAC	6 cut(s)	491, 901, 1073, 1132, 1807, 1929
AfiI	CCNNNNNNNGG	8 cut(s)	306, 492, 840, 1238, 1300, 1502, 1547, 1700
AjiI	CACGTC	1 cut(s)	244
AjnI	CCWGG	7 cut(s)	234, 1237, 1501, 1508, 1522, 1633, 2020
AjuI	GAANNNNNNNTTGG	2 cut(s)	453, 485
AleI	CACNNNNGTG	1 cut(s)	1301
Alw21I	GWGCWC	2 cut(s)	664, 1025
Alw26I	GTCTC	2 cut(s)	425, 1314
AlwI	GGATC	4 cut(s)	986, 999, 1157, 2117
AlwNI	CAGNNNCTG	1 cut(s)	1856
Aor13HI	TCCGGA	1 cut(s)	1947
AoxI	GGCC	5 cut(s)	72, 120, 1511, 1631, 2023
ApeKI	GCWGC	6 cut(s)	39, 815, 1045, 1728, 1856, 1994
ApoI	RAATTY	1 cut(s)	2061
AseI	ATTAAT	1 cut(s)	1392
Asp718I	GGTACC	1 cut(s)	1805
AspLEI	GCGC	1 cut(s)	140
AspS9I	GGNCC	5 cut(s)	73, 282, 292, 1178, 1366
AsuHPI	GGTGA	9 cut(s)	64, 89, 188, 415, 485, 1337, 1670, 1730, 2114
AvaII	GGWCC	4 cut(s)	282, 292, 1178, 1366
BaeGI	GKGCMC	3 cut(s)	1161, 1222, 2020
BalI	TGGCCA	2 cut(s)	122, 1513
BamHI	GGATCC	1 cut(s)	991
BanI	GGYRCC	5 cut(s)	137, 1219, 1505, 1805, 2017
BanII	GRGCYC	1 cut(s)	510
Bbv12I	GWGCWC	2 cut(s)	664, 1025
BbvI	GCAGC	6 cut(s)	51, 802, 1032, 1740, 1843, 2006
BccI	CCATC	9 cut(s)	112, 293, 339, 512, 1120, 1286, 1316, 1715, 1736
BcgI	CGANNNNNNTGC	2 cut(s)	698, 732
BciT130I	CCWGG	7 cut(s)	236, 1239, 1503, 1510, 1524, 1635, 2022
BclI	TGATCA	3 cut(s)	84, 753, 1660
BcoDI	GTCTC	2 cut(s)	425, 1314
BfaI	CTAG	2 cut(s)	2090, 2109
BfoI	RGCGCY	1 cut(s)	141
BfuAI	ACCTGC	1 cut(s)	108
BglII	AGATCT	1 cut(s)	1942
BisI	GCNGC	7 cut(s)	40, 104, 816, 1046, 1729, 1857, 1995
BlsI	GCNGC	7 cut(s)	41, 105, 817, 1047, 1730, 1858, 1996
BmcAI	AGTACT	1 cut(s)	901
Bme1390I	CCNGG	7 cut(s)	236, 1239, 1503, 1510, 1524, 1635, 2022
Bme18I	GGWCC	4 cut(s)	282, 292, 1178, 1366
BmgBI	CACGTC	1 cut(s)	244
BmgT120I	GGNCC	5 cut(s)	73, 282, 292, 1178, 1366
BmiI	GGNNCC	8 cut(s)	139, 294, 993, 1221, 1367, 1507, 1807, 2019
BmrFI	CCNGG	7 cut(s)	236, 1239, 1503, 1510, 1524, 1635, 2022
BmrI	ACTGGG	4 cut(s)	502, 1035, 1164, 2023
BmsI	GCATC	5 cut(s)	592, 802, 973, 1715, 1846
BmuI	ACTGGG	4 cut(s)	502, 1035, 1164, 2023
BpmI	CTGGAG	3 cut(s)	287, 1077, 1656
BsaAI	YACGTR	1 cut(s)	2163
BsaBI	GATNNNNATC	1 cut(s)	1746
BsaHI	GRCGYC	1 cut(s)	138
BsaI	GGTCTC	2 cut(s)	425, 1314
BsaJI	CCNNGG	3 cut(s)	1035, 1237, 1369
BsaWI	WCCGGW	2 cut(s)	1947, 1999
BsaXI	ACNNNNNCTCC	4 cut(s)	212, 242, 1185, 1215
Bsc4I	CCNNNNNNNGG	8 cut(s)	306, 492, 840, 1238, 1300, 1502, 1547, 1700
Bse1I	ACTGG	9 cut(s)	497, 1014, 1030, 1060, 1130, 1159, 1480, 1757, 2018
Bse3DI	GCAATG	2 cut(s)	508, 769
Bse8I	GATNNNNATC	1 cut(s)	1746
BseAI	TCCGGA	1 cut(s)	1947
BseBI	CCWGG	7 cut(s)	236, 1239, 1503, 1510, 1524, 1635, 2022
BseDI	CCNNGG	3 cut(s)	1035, 1237, 1369
BseGI	GGATG	5 cut(s)	943, 1112, 1576, 1730, 1837
BseJI	GATNNNNATC	1 cut(s)	1746
BseLI	CCNNNNNNNGG	8 cut(s)	306, 492, 840, 1238, 1300, 1502, 1547, 1700
BseMI	GCAATG	2 cut(s)	508, 769
BseMII	CTCAG	3 cut(s)	49, 1856, 2057
BseNI	ACTGG	9 cut(s)	497, 1014, 1030, 1060, 1130, 1159, 1480, 1757, 2018
BseRI	GAGGAG	1 cut(s)	2071
BseSI	GKGCMC	3 cut(s)	1161, 1222, 2020
BseXI	GCAGC	6 cut(s)	51, 802, 1032, 1740, 1843, 2006
BseYI	CCCAGC	1 cut(s)	215
BsgI	GTGCAG	4 cut(s)	987, 1031, 1621, 1869
Bsh1236I	CGCG	1 cut(s)	1351
BshFI	GGCC	5 cut(s)	74, 122, 1513, 1633, 2025
BshNI	GGYRCC	5 cut(s)	137, 1219, 1505, 1805, 2017
BsiHKAI	GWGCWC	2 cut(s)	664, 1025
BsiSI	CCGG	4 cut(s)	141, 300, 1948, 2000
BslFI	GGGAC	5 cut(s)	30, 230, 1428, 1748, 1902
BslI	CCNNNNNNNGG	8 cut(s)	306, 492, 840, 1238, 1300, 1502, 1547, 1700
BsmAI	GTCTC	2 cut(s)	425, 1314
BsmFI	GGGAC	5 cut(s)	30, 230, 1428, 1748, 1902
BsmI	GAATGC	1 cut(s)	1640
BsnI	GGCC	5 cut(s)	74, 122, 1513, 1633, 2025
Bso31I	GGTCTC	2 cut(s)	425, 1314
Bsp1286I	GDGCHC	6 cut(s)	510, 664, 1025, 1161, 1222, 2020
Bsp13I	TCCGGA	1 cut(s)	1947
Bsp1407I	TGTACA	2 cut(s)	1071, 1130
Bsp68I	TCGCGA	1 cut(s)	1351
BspACI	CCGC	7 cut(s)	103, 232, 297, 417, 1306, 1559, 1809
BspANI	GGCC	5 cut(s)	74, 122, 1513, 1633, 2025
BspCNI	CTCAG	3 cut(s)	48, 1855, 2058
BspEI	TCCGGA	1 cut(s)	1947
BspFNI	CGCG	1 cut(s)	1351
BspHI	TCATGA	1 cut(s)	1663
BspLI	GGNNCC	8 cut(s)	139, 294, 993, 1221, 1367, 1507, 1807, 2019
BspMI	ACCTGC	1 cut(s)	108
BspPI	GGATC	4 cut(s)	986, 999, 1157, 2117
BspT107I	GGYRCC	5 cut(s)	137, 1219, 1505, 1805, 2017
BspTNI	GGTCTC	2 cut(s)	425, 1314
BsrDI	GCAATG	2 cut(s)	508, 769
BsrGI	TGTACA	2 cut(s)	1071, 1130
BsrI	ACTGG	9 cut(s)	497, 1014, 1030, 1060, 1130, 1159, 1480, 1757, 2018
BssECI	CCNNGG	3 cut(s)	1035, 1237, 1369
BssNI	GRCGYC	1 cut(s)	138
BssT1I	CCWWGG	2 cut(s)	1035, 1369
Bst2UI	CCWGG	7 cut(s)	236, 1239, 1503, 1510, 1524, 1635, 2022
Bst4CI	ACNGT	3 cut(s)	1142, 1201, 1937
Bst6I	CTCTTC	3 cut(s)	189, 884, 913
BstACI	GRCGYC	1 cut(s)	138
BstAPI	GCANNNNNTGC	1 cut(s)	1856
BstAUI	TGTACA	2 cut(s)	1071, 1130
BstBAI	YACGTR	1 cut(s)	2163
BstC8I	GCNNGC	6 cut(s)	560, 564, 654, 664, 740, 1385
BstDEI	CTNAG	4 cut(s)	35, 783, 1842, 2066
BstEII	GGTNACC	1 cut(s)	473
BstF5I	GGATG	5 cut(s)	943, 1112, 1576, 1730, 1837
BstFNI	CGCG	1 cut(s)	1351
BstH2I	RGCGCY	1 cut(s)	141
BstHHI	GCGC	1 cut(s)	140
BstMAI	GTCTC	2 cut(s)	425, 1314
BstMWI	GCNNNNNNNGC	6 cut(s)	441, 1348, 1519, 1856, 1994, 2095
BstNI	CCWGG	7 cut(s)	236, 1239, 1503, 1510, 1524, 1635, 2022
BstNSI	RCATGY	1 cut(s)	110
BstPI	GGTNACC	1 cut(s)	473
BstSCI	CCNGG	7 cut(s)	234, 1237, 1501, 1508, 1522, 1633, 2020
BstSLI	GKGCMC	3 cut(s)	1161, 1222, 2020
BstUI	CGCG	1 cut(s)	1351
BstV1I	GCAGC	6 cut(s)	51, 802, 1032, 1740, 1843, 2006
BstX2I	RGATCY	3 cut(s)	991, 1942, 2122
BstXI	CCANNNNNNTGG	3 cut(s)	13, 631, 1404
BstYI	RGATCY	3 cut(s)	991, 1942, 2122
BsuRI	GGCC	5 cut(s)	74, 122, 1513, 1633, 2025
BtgZI	GCGATG	1 cut(s)	615
BtrI	CACGTC	1 cut(s)	244
BtsCI	GGATG	5 cut(s)	943, 1112, 1576, 1730, 1837
BtsI	GCAGTG	3 cut(s)	975, 1074, 1609
BtuMI	TCGCGA	1 cut(s)	1351
BveI	ACCTGC	1 cut(s)	108
Cac8I	GCNNGC	6 cut(s)	560, 564, 654, 664, 740, 1385
CaiI	CAGNNNCTG	1 cut(s)	1856
CciI	TCATGA	1 cut(s)	1663
CfoI	GCGC	1 cut(s)	140
Cfr13I	GGNCC	5 cut(s)	73, 282, 292, 1178, 1366
CseI	GACGC	1 cut(s)	1251
CsiI	ACCWGGT	1 cut(s)	1501
Csp6I	GTAC	6 cut(s)	490, 900, 1072, 1131, 1806, 1928
CspCI	CAANNNNNGTGG	2 cut(s)	1771, 1806
CviAII	CATG	7 cut(s)	107, 625, 1315, 1404, 1629, 1664, 1877
CviQI	GTAC	6 cut(s)	490, 900, 1072, 1131, 1806, 1928
DdeI	CTNAG	4 cut(s)	35, 783, 1842, 2066
DinI	GGCGCC	1 cut(s)	139
DraI	TTTAAA	2 cut(s)	1090, 1690
DraIII	CACNNNGTG	1 cut(s)	1461
EaeI	YGGCCR	2 cut(s)	120, 1511
Eam1104I	CTCTTC	3 cut(s)	189, 884, 913
EarI	CTCTTC	3 cut(s)	189, 884, 913
Eco130I	CCWWGG	2 cut(s)	1035, 1369
Eco24I	GRGCYC	1 cut(s)	510
Eco31I	GGTCTC	2 cut(s)	425, 1314
Eco32I	GATATC	2 cut(s)	394, 1748
Eco47I	GGWCC	4 cut(s)	282, 292, 1178, 1366
Eco57I	CTGAAG	1 cut(s)	213
Eco91I	GGTNACC	1 cut(s)	473
EcoO109I	RGGNCCY	2 cut(s)	292, 1366
EcoO65I	GGTNACC	1 cut(s)	473
EcoRI	GAATTC	1 cut(s)	2061
EcoRII	CCWGG	7 cut(s)	234, 1237, 1501, 1508, 1522, 1633, 2020
EcoRV	GATATC	2 cut(s)	394, 1748
EcoT14I	CCWWGG	2 cut(s)	1035, 1369
EcoT38I	GRGCYC	1 cut(s)	510
EgeI	GGCGCC	1 cut(s)	139
EheI	GGCGCC	1 cut(s)	139
ErhI	CCWWGG	2 cut(s)	1035, 1369
FaeI	CATG	7 cut(s)	110, 628, 1318, 1407, 1632, 1667, 1880
FalI	AAGNNNNNCTT	2 cut(s)	453, 485
FaqI	GGGAC	5 cut(s)	30, 230, 1428, 1748, 1902
FatI	CATG	7 cut(s)	106, 624, 1314, 1403, 1628, 1663, 1876
FauI	CCCGC	2 cut(s)	239, 304
FbaI	TGATCA	3 cut(s)	84, 753, 1660
FblI	GTMKAC	1 cut(s)	360
Fnu4HI	GCNGC	7 cut(s)	40, 104, 816, 1046, 1729, 1857, 1995
FokI	GGATG	5 cut(s)	950, 1099, 1583, 1737, 1824
FriOI	GRGCYC	1 cut(s)	510
Fsp4HI	GCNGC	7 cut(s)	40, 104, 816, 1046, 1729, 1857, 1995
FspBI	CTAG	2 cut(s)	2090, 2109
GlaI	GCGC	1 cut(s)	139
GluI	GCNGC	7 cut(s)	40, 104, 816, 1046, 1729, 1857, 1995
GsaI	CCCAGC	1 cut(s)	219
GsuI	CTGGAG	3 cut(s)	287, 1077, 1656
HaeII	RGCGCY	1 cut(s)	141
HaeIII	GGCC	5 cut(s)	74, 122, 1513, 1633, 2025
HapII	CCGG	4 cut(s)	141, 300, 1948, 2000
HgaI	GACGC	1 cut(s)	1251
HhaI	GCGC	1 cut(s)	140
Hin1I	GRCGYC	1 cut(s)	138
Hin1II	CATG	7 cut(s)	110, 628, 1318, 1407, 1632, 1667, 1880
Hin6I	GCGC	1 cut(s)	138
HinP1I	GCGC	1 cut(s)	138
HinfI	GANTC	9 cut(s)	113, 370, 710, 827, 878, 1433, 1492, 1820, 2007
HpaII	CCGG	4 cut(s)	141, 300, 1948, 2000
HphI	GGTGA	9 cut(s)	64, 89, 188, 415, 485, 1337, 1670, 1730, 2114
Hpy166II	GTNNAC	8 cut(s)	361, 616, 679, 1072, 1074, 1131, 1793, 1921
Hpy188I	TCNGA	9 cut(s)	84, 193, 313, 325, 1117, 1453, 1646, 1973, 2067
Hpy8I	GTNNAC	8 cut(s)	361, 616, 679, 1072, 1074, 1131, 1793, 1921
Hpy99I	CGWCG	1 cut(s)	224
HpyAV	CCTTC	8 cut(s)	141, 491, 908, 1208, 1570, 1586, 1758, 2036
HpyCH4III	ACNGT	3 cut(s)	1142, 1201, 1937
HpyCH4IV	ACGT	3 cut(s)	243, 552, 2162
HpyF10VI	GCNNNNNNNGC	6 cut(s)	441, 1348, 1519, 1856, 1994, 2095
HpyF3I	CTNAG	4 cut(s)	35, 783, 1842, 2066
HpySE526I	ACGT	3 cut(s)	243, 552, 2162
Hsp92I	GRCGYC	1 cut(s)	138
Hsp92II	CATG	7 cut(s)	110, 628, 1318, 1407, 1632, 1667, 1880
HspAI	GCGC	1 cut(s)	138
KasI	GGCGCC	1 cut(s)	137
Kpn2I	TCCGGA	1 cut(s)	1947
KpnI	GGTACC	1 cut(s)	1809
Ksp22I	TGATCA	3 cut(s)	84, 753, 1660
LmnI	GCTCC	3 cut(s)	1020, 1193, 1637
Lsp1109I	GCAGC	6 cut(s)	51, 802, 1032, 1740, 1843, 2006
LweI	GCATC	5 cut(s)	592, 802, 973, 1715, 1846
MabI	ACCWGGT	1 cut(s)	1501
MaeI	CTAG	2 cut(s)	2090, 2109
MaeII	ACGT	3 cut(s)	243, 552, 2162
MaeIII	GTNAC	5 cut(s)	473, 1168, 1273, 1909, 2102
MboII	GAAGA	6 cut(s)	206, 901, 923, 930, 1952, 2059
MfeI	CAATTG	1 cut(s)	439
MflI	RGATCY	3 cut(s)	991, 1942, 2122
MhlI	GDGCHC	6 cut(s)	510, 664, 1025, 1161, 1222, 2020
MlsI	TGGCCA	2 cut(s)	122, 1513
MluCI	AATT	7 cut(s)	7, 439, 480, 1225, 1587, 2061, 2073
MluNI	TGGCCA	2 cut(s)	122, 1513
Mly113I	GGCGCC	1 cut(s)	138
MlyI	GAGTC	2 cut(s)	122, 1486
MmeI	TCCRAC	6 cut(s)	291, 348, 980, 1127, 1140, 1408
Mox20I	TGGCCA	2 cut(s)	122, 1513
MroI	TCCGGA	1 cut(s)	1947
MscI	TGGCCA	2 cut(s)	122, 1513
MseI	TTAA	8 cut(s)	527, 629, 771, 863, 1089, 1392, 1689, 1884
MslI	CAYNNNNRTG	4 cut(s)	629, 1164, 1301, 1408
Msp20I	TGGCCA	2 cut(s)	122, 1513
MspA1I	CMGCKG	1 cut(s)	1136
MspI	CCGG	4 cut(s)	141, 300, 1948, 2000
MspR9I	CCNGG	7 cut(s)	236, 1239, 1503, 1510, 1524, 1635, 2022
MunI	CAATTG	1 cut(s)	439
Mva1269I	GAATGC	1 cut(s)	1640
MvaI	CCWGG	7 cut(s)	236, 1239, 1503, 1510, 1524, 1635, 2022
MvnI	CGCG	1 cut(s)	1351
MwoI	GCNNNNNNNGC	6 cut(s)	441, 1348, 1519, 1856, 1994, 2095
NarI	GGCGCC	1 cut(s)	138
NlaIII	CATG	7 cut(s)	110, 628, 1318, 1407, 1632, 1667, 1880
NlaIV	GGNNCC	8 cut(s)	139, 294, 993, 1221, 1367, 1507, 1807, 2019
NmuCI	GTSAC	4 cut(s)	473, 1168, 1273, 2102
NruI	TCGCGA	1 cut(s)	1351
NspI	RCATGY	1 cut(s)	110
OliI	CACNNNNGTG	1 cut(s)	1301
PagI	TCATGA	1 cut(s)	1663
PaqCI	CACCTGC	1 cut(s)	108
PcsI	WCGNNNNNNNCGW	1 cut(s)	372
PctI	GAATGC	1 cut(s)	1640
PfeI	GAWTC	7 cut(s)	370, 710, 827, 878, 1433, 1820, 2007
PflMI	CCANNNNNTGG	1 cut(s)	1502
PkrI	GCNGC	7 cut(s)	41, 105, 817, 1047, 1730, 1858, 1996
PleI	GAGTC	2 cut(s)	121, 1486
PluTI	GGCGCC	1 cut(s)	141
PpsI	GAGTC	2 cut(s)	121, 1486
Ppu21I	YACGTR	1 cut(s)	2163
PpuMI	RGGWCCY	2 cut(s)	292, 1366
PshBI	ATTAAT	1 cut(s)	1392
Psp1406I	AACGTT	1 cut(s)	552
Psp5II	RGGWCCY	2 cut(s)	292, 1366
Psp6I	CCWGG	7 cut(s)	234, 1237, 1501, 1508, 1522, 1633, 2020
PspEI	GGTNACC	1 cut(s)	473
PspFI	CCCAGC	1 cut(s)	215
PspGI	CCWGG	7 cut(s)	234, 1237, 1501, 1508, 1522, 1633, 2020
PspN4I	GGNNCC	8 cut(s)	139, 294, 993, 1221, 1367, 1507, 1807, 2019
PspPI	GGNCC	5 cut(s)	73, 282, 292, 1178, 1366
PspPPI	RGGWCCY	2 cut(s)	292, 1366
PstNI	CAGNNNCTG	1 cut(s)	1856
PsuI	RGATCY	3 cut(s)	991, 1942, 2122
PvuII	CAGCTG	1 cut(s)	1136
RruI	TCGCGA	1 cut(s)	1351
RsaI	GTAC	6 cut(s)	491, 901, 1073, 1132, 1807, 1929
RsaNI	GTAC	6 cut(s)	490, 900, 1072, 1131, 1806, 1928
RseI	CAYNNNNRTG	4 cut(s)	629, 1164, 1301, 1408
SaqAI	TTAA	8 cut(s)	527, 629, 771, 863, 1089, 1392, 1689, 1884
SatI	GCNGC	7 cut(s)	40, 104, 816, 1046, 1729, 1857, 1995
Sau96I	GGNCC	5 cut(s)	73, 282, 292, 1178, 1366
ScaI	AGTACT	1 cut(s)	901
SchI	GAGTC	2 cut(s)	122, 1486
ScrFI	CCNGG	7 cut(s)	236, 1239, 1503, 1510, 1524, 1635, 2022
SduI	GDGCHC	6 cut(s)	510, 664, 1025, 1161, 1222, 2020
SexAI	ACCWGGT	1 cut(s)	1501
SfaNI	GCATC	5 cut(s)	592, 802, 973, 1715, 1846
SfoI	GGCGCC	1 cut(s)	139
SinI	GGWCC	4 cut(s)	282, 292, 1178, 1366
SmiI	ATTTAAAT	1 cut(s)	1090
SmiMI	CAYNNNNRTG	4 cut(s)	629, 1164, 1301, 1408
Sse9I	AATT	7 cut(s)	7, 439, 480, 1225, 1587, 2061, 2073
SsiI	CCGC	7 cut(s)	103, 232, 297, 417, 1306, 1559, 1809
SspDI	GGCGCC	1 cut(s)	137
SspMI	CTAG	2 cut(s)	2090, 2109
StyD4I	CCNGG	7 cut(s)	234, 1237, 1501, 1508, 1522, 1633, 2020
StyI	CCWWGG	2 cut(s)	1035, 1369
SwaI	ATTTAAAT	1 cut(s)	1090
TaaI	ACNGT	3 cut(s)	1142, 1201, 1937
TaiI	ACGT	3 cut(s)	246, 555, 2165
TaqI	TCGA	7 cut(s)	116, 288, 366, 375, 708, 825, 2136
TaqII	GACCGA	1 cut(s)	492
TasI	AATT	7 cut(s)	7, 439, 480, 1225, 1587, 2061, 2073
TatI	WGTACW	4 cut(s)	489, 899, 1071, 1130
TauI	GCSGC	1 cut(s)	106
TfiI	GAWTC	7 cut(s)	370, 710, 827, 878, 1433, 1820, 2007
Tru1I	TTAA	8 cut(s)	527, 629, 771, 863, 1089, 1392, 1689, 1884
Tru9I	TTAA	8 cut(s)	527, 629, 771, 863, 1089, 1392, 1689, 1884
TseFI	GTSAC	4 cut(s)	473, 1168, 1273, 2102
TseI	GCWGC	6 cut(s)	39, 815, 1045, 1728, 1856, 1994
Tsp45I	GTSAC	4 cut(s)	473, 1168, 1273, 2102
TspDTI	ATGAA	4 cut(s)	891, 1227, 1680, 1689
TspGWI	ACGGA	1 cut(s)	1938
Van91I	CCANNNNNTGG	1 cut(s)	1502
VpaK11BI	GGWCC	4 cut(s)	282, 292, 1178, 1366
VspI	ATTAAT	1 cut(s)	1392
XapI	RAATTY	1 cut(s)	2061
XceI	RCATGY	1 cut(s)	110
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2018
XmiI	GTMKAC	1 cut(s)	360
XspI	CTAG	2 cut(s)	2090, 2109
ZrmI	AGTACT	1 cut(s)	901

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.