Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0002023

Physical Location & Seq

Genomic Coordinates Reverse (-)

71909241 .. 71910843

Gene Structure 1603 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0598400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1590 bp

ATGCTCAAGAGGATGATGATGAGAGAAATGTGGTTGTGGCCTCAACTGGGCTCAGTGCTGGCAAGTATGATGTTTGCTTATGCCATGTTTCACCGATACTTTCCTTATCAACTTCGGAGCCATATTCAAAGATATACCTTAAAATGGTTTGGGTATCTGTACCCTTTCATCCAAATTTCCTTTGATGAATATGCCGGCGAGTTGCACAAGCGCAGTGAAGTGTTCACCGCCATCCAAAGCTACCTCAGCACCAAGTCATCTACAGAAGCAAAACGGCTCAAAGCAAAAGAAGTCAAGGGTAGCAAGTCTCTAGTCCTTGTCATGGATGACAATGAAGAGGTGACTGATGAATTCCAAGGCATTAAGCTCTGGTGGGCTTCCAGGAAAAGCGCACCTAGGCAATATTCATCATTTCCTTTCTATCCTCAGTCTGATGAGAAGAGACGTTATAAGCTCACATTCCACAGACGCCACCGGGATATAATCACAGGGTCTTATCTTGACCATGTGAGAAAAGAAGGGAAGGCAATAGCAGTGAGTCATAGGCAAAGGAAGCTTTACATTAACAATCCTGCTTCTGGATACAAAACGAGGAAATGGAGCTCCGTAGCCTTTGATCACCCTGCAACATTTGAGACCATAGCAATGGAGCCAAAAAAGAAAGAGGAAATCATCAATGACCTCATGAAGTTCAGCAATGGGAAGGAGTACTACGCAAAAATCGGGAAACCTTGGAAGCGGGGTTATCTTCTGTATGGGCCACCAGGCACCGGTAAGTCCACCATGATTGCTGCCATGTCTAACCTCATGAACTATGATGTTTATGATCTTGAACTGACGACAGTGAAGAGCAACACTGATCTGAGGAAGTTGCTGATTGACACGCCAAGTAAGGCTATTATTGTGATCGAGGACATTGATTGTTCACTTGATCTTACGGGCCAAAGAAAGAAGAAGAAGGAGAAAGACGAAAAAGATAAAGAAAAAAAGGATCCAACCTGTAAAATGAGGGAAGGAGAAGAAAGCAATGCAAGCCAGGTTACTTTGTCTGGGCTATTGAACTTCATTGATGGTATTTGGTCAGCTTGCGGAGGTGAAAGAATCATTGTGTTTACCACTAATTATGTGGAGAAACTTGATCCTGCACTGATAAGGAGAGGAAGGATGGACAAGCATATCAGCTTGTCTTATTGTTGCTATGAAGCATTCAAAGTGCTTGCAAGGAACTACTTGAATTTAGATACACATGAATTGTTCGGAAGCATTGAACGTTTGTTGGGGGAGACCAACATGACACCAGCTGATGTGGCAGAGAATTTGATGCCTAAATCTAATGTAGAGGATGCCATCTCTTGTTTGAAGAAATTGATTGAAGCTCTAGAGATTGCGAAGGAGGAGGCAAGAGTGAAGGCTGAGGAAGAAGCAAGCAAGAAGGCAGTTAAAGAAGCAAAAGTGAACGCAAAGAAAGAAGCAAAATTGAAGGCAGAGGAAGCAGAGAAGAAAACAGAGGAGTCCGCTAAAGATGAAGAGAAATGTATCGGAACATCAGCTAAACAAGATGTGAAAGAAAATAGAGTTATTGAAAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003987 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0005829 GO:0006082 GO:0006083 GO:0008150 GO:0008152 GO:0009507 GO:0009514 GO:0009532 GO:0009536 GO:0009570 GO:0009987 GO:0016405 GO:0016874 GO:0016877 GO:0016878 GO:0016999 GO:0017144 GO:0019752 GO:0032787 GO:0042579 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0071704

KEGG Pathways

Metabolic & Signaling

ko00010 ko00620 ko00640 ko00680 ko00720 ko01100 ko01110 ko01120 ko01130 ko01200 map00010 map00620 map00640 map00680 map00720 map01100 map01110 map01120 map01130 map01200

Pfam Domains

Protein Families

ACAS_N AMP-binding AMP-binding_C

Protein Analysis

529

Amino Acids

61.1

Weight (kDa)

9.15

Isoelectric Point (pI)

41.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA_assoc	PF14363	34 - 127	7.5e-26	Domain associated at C-terminal with AAA
AAA	PF00004	249 - 396	6.8e-17	ATPase family associated with various cellular activities (AAA)
AAA_lid_At3g28540	PF25568	398 - 471	1.4e-32	At3g28540-like, AAA+ ATPase lid domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002023)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G36880 AT5G36880 AT5G36880 AT5G36880 AT5G36880 AT5G36880
fragaria_vesca	FvH4_6g54480 FvH4_6g54480 FvH4_6g54480 FvH4_6g54480 FvH4_6g54480 FvH4_6g54480 FvH4_6g54480 FvH4_6g54480 FvH4_6g54480 FvH4_6g54480 FvH4_6g54480 FvH4_6g54480 FvH4_6g54480 FvH4_6g54480 FvH4_6g54480 FvH4_6g54480 FvH4_6g54480 FvH4_6g54480
malus_domestica	MD09G1000400.v1.1 MD17G1003300.v1.1
prunus_persica	Prupe.3G315800_v2.0.a1
pyrus_communis	pycom111g00030 pycom17g00010
rosa_chinensis	RchiOBHm_Chr2g0176771
rosa_multiflora	Rmu_sc0020992.1_g000001
rosa_roxburghii	Rroxscaffold_2G00076170
rosa_rugosa	Rorug02G0598400 Rorug02G0598500 Rorug02G0598600 Rorug02G0598700 Rorug02G0598800 Rorug02G0598900 Rorug02G0599000 Rorug02G0599100 Rorug02G0599200
rosa_samantha	Rh2AG676000 Rh2BG687100 Rh2CG650500
rosa_wichuraiana	Rw2G055470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	450
AccB1I	GGYRCC	1 cut(s)	767
AciI	CCGC	4 cut(s)	228, 739, 1089, 1515
AclI	AACGTT	1 cut(s)	1270
AclWI	GGATC	3 cut(s)	986, 999, 1133
AcsI	RAATTY	4 cut(s)	174, 350, 1234, 1315
AcyI	GRCGYC	1 cut(s)	469
AfaI	GTAC	2 cut(s)	161, 710
AfiI	CCNNNNNNNGG	5 cut(s)	47, 144, 322, 578, 770
AgeI	ACCGGT	1 cut(s)	770
AjnI	CCWGG	3 cut(s)	380, 763, 1035
Alw21I	GWGCWC	1 cut(s)	605
Alw26I	GTCTC	4 cut(s)	312, 436, 629, 1277
AlwI	GGATC	3 cut(s)	986, 999, 1133
AoxI	GGCC	3 cut(s)	38, 758, 940
ApeKI	GCWGC	1 cut(s)	791
ApoI	RAATTY	4 cut(s)	174, 350, 1234, 1315
AsiGI	ACCGGT	1 cut(s)	770
AspA2I	CCTAGG	1 cut(s)	395
AspLEI	GCGC	2 cut(s)	213, 392
AspS9I	GGNCC	2 cut(s)	758, 940
AsuC2I	CCSGG	1 cut(s)	476
AsuHPI	GGTGA	5 cut(s)	83, 217, 352, 611, 1106
AvrII	CCTAGG	1 cut(s)	395
BamHI	GGATCC	1 cut(s)	991
BanI	GGYRCC	1 cut(s)	767
BanII	GRGCYC	2 cut(s)	53, 605
BarI	GAAGNNNNNNTAC	2 cut(s)	695, 727
Bbv12I	GWGCWC	1 cut(s)	605
BbvCI	CCTCAGC	2 cut(s)	245, 1413
BbvI	GCAGC	1 cut(s)	778
BccI	CCATC	4 cut(s)	239, 1064, 1159, 1355
BceAI	ACGGC	1 cut(s)	290
BciT130I	CCWGG	3 cut(s)	382, 765, 1037
BciVI	GTATCC	1 cut(s)	575
BclI	TGATCA	1 cut(s)	616
BcnI	CCSGG	1 cut(s)	476
BcoDI	GTCTC	4 cut(s)	312, 436, 629, 1277
BfaI	CTAG	3 cut(s)	311, 396, 1379
BfmI	CTRYAG	1 cut(s)	261
BfuI	GTATCC	1 cut(s)	575
BisI	GCNGC	1 cut(s)	792
BlnI	CCTAGG	1 cut(s)	395
BlsI	GCNGC	1 cut(s)	793
BmcAI	AGTACT	1 cut(s)	710
Bme1390I	CCNGG	4 cut(s)	382, 476, 765, 1037
BmgT120I	GGNCC	2 cut(s)	758, 940
BmiI	GGNNCC	4 cut(s)	119, 651, 769, 993
BmrFI	CCNGG	4 cut(s)	382, 476, 765, 1037
BmrI	ACTGGG	1 cut(s)	56
BmsI	GCATC	2 cut(s)	1311, 1333
BmuI	ACTGGG	1 cut(s)	56
Bpu10I	CCTNAGC	2 cut(s)	245, 1413
BpuMI	CCSGG	1 cut(s)	476
BsaHI	GRCGYC	1 cut(s)	469
BsaI	GGTCTC	2 cut(s)	629, 1277
BsaJI	CCNNGG	3 cut(s)	355, 395, 731
BsaWI	WCCGGW	1 cut(s)	770
Bsc4I	CCNNNNNNNGG	5 cut(s)	47, 144, 322, 578, 770
Bse118I	RCCGGY	2 cut(s)	194, 770
Bse1I	ACTGG	1 cut(s)	51
Bse3DI	GCAATG	3 cut(s)	651, 703, 1033
BseBI	CCWGG	3 cut(s)	382, 765, 1037
BseDI	CCNNGG	3 cut(s)	355, 395, 731
BseGI	GGATG	6 cut(s)	18, 168, 231, 331, 1170, 1348
BseLI	CCNNNNNNNGG	5 cut(s)	47, 144, 322, 578, 770
BseMI	GCAATG	3 cut(s)	651, 703, 1033
BseMII	CTCAG	5 cut(s)	66, 259, 440, 854, 1404
BseNI	ACTGG	1 cut(s)	51
BseRI	GAGGAG	2 cut(s)	1409, 1523
BseXI	GCAGC	1 cut(s)	778
BsgI	GTGCAG	1 cut(s)	1128
BshFI	GGCC	3 cut(s)	40, 760, 942
BshNI	GGYRCC	1 cut(s)	767
BshTI	ACCGGT	1 cut(s)	770
BsiHKAI	GWGCWC	1 cut(s)	605
BsiSI	CCGG	3 cut(s)	195, 475, 771
BslI	CCNNNNNNNGG	5 cut(s)	47, 144, 322, 578, 770
BsmAI	GTCTC	4 cut(s)	312, 436, 629, 1277
BsmBI	CGTCTC	1 cut(s)	436
BsmI	GAATGC	1 cut(s)	1205
BsnI	GGCC	3 cut(s)	40, 760, 942
Bso31I	GGTCTC	2 cut(s)	629, 1277
Bsp1286I	GDGCHC	2 cut(s)	53, 605
Bsp143I	GATC	7 cut(s)	616, 826, 859, 906, 931, 991, 1138
BspACI	CCGC	4 cut(s)	228, 739, 1089, 1515
BspANI	GGCC	3 cut(s)	40, 760, 942
BspCNI	CTCAG	5 cut(s)	65, 258, 439, 855, 1405
BspHI	TCATGA	2 cut(s)	684, 807
BspLI	GGNNCC	4 cut(s)	119, 651, 769, 993
BspPI	GGATC	3 cut(s)	986, 999, 1133
BspQI	GCTCTTC	1 cut(s)	842
BspT107I	GGYRCC	1 cut(s)	767
BspTNI	GGTCTC	2 cut(s)	629, 1277
BsrDI	GCAATG	3 cut(s)	651, 703, 1033
BsrFI	RCCGGY	2 cut(s)	194, 770
BsrI	ACTGG	1 cut(s)	51
BssAI	RCCGGY	2 cut(s)	194, 770
BssECI	CCNNGG	3 cut(s)	355, 395, 731
BssMI	GATC	7 cut(s)	616, 826, 859, 906, 931, 991, 1138
BssNI	GRCGYC	1 cut(s)	469
BssT1I	CCWWGG	3 cut(s)	355, 395, 731
Bst2UI	CCWGG	3 cut(s)	382, 765, 1037
Bst4CI	ACNGT	1 cut(s)	844
Bst6I	CTCTTC	4 cut(s)	330, 434, 842, 1521
BstACI	GRCGYC	1 cut(s)	469
BstC8I	GCNNGC	6 cut(s)	60, 196, 1033, 1087, 1218, 1426
BstDEI	CTNAG	5 cut(s)	52, 245, 426, 863, 1413
BstF5I	GGATG	6 cut(s)	18, 168, 231, 331, 1170, 1348
BstHHI	GCGC	2 cut(s)	213, 392
BstKTI	GATC	7 cut(s)	619, 829, 862, 909, 934, 994, 1141
BstMAI	GTCTC	4 cut(s)	312, 436, 629, 1277
BstMBI	GATC	7 cut(s)	616, 826, 859, 906, 931, 991, 1138
BstMWI	GCNNNNNNNGC	5 cut(s)	246, 553, 1032, 1307, 1490
BstNI	CCWGG	3 cut(s)	382, 765, 1037
BstSCI	CCNGG	4 cut(s)	380, 474, 763, 1035
BstSFI	CTRYAG	1 cut(s)	261
BstV1I	GCAGC	1 cut(s)	778
BstX2I	RGATCY	1 cut(s)	991
BstXI	CCANNNNNNTGG	1 cut(s)	646
BstYI	RGATCY	1 cut(s)	991
BsuI	GTATCC	1 cut(s)	575
BsuRI	GGCC	3 cut(s)	40, 760, 942
BtsCI	GGATG	6 cut(s)	18, 168, 231, 331, 1170, 1348
BtsI	GCAGTG	2 cut(s)	220, 540
BtsIMutI	CAGTG	6 cut(s)	60, 220, 540, 849, 855, 1145
Cac8I	GCNNGC	6 cut(s)	60, 196, 1033, 1087, 1218, 1426
CciI	TCATGA	2 cut(s)	684, 807
CfoI	GCGC	2 cut(s)	213, 392
Cfr10I	RCCGGY	2 cut(s)	194, 770
Cfr13I	GGNCC	2 cut(s)	758, 940
CseI	GACGC	1 cut(s)	477
Csp6I	GTAC	2 cut(s)	160, 709
CspAI	ACCGGT	1 cut(s)	770
CspCI	CAANNNNNGTGG	2 cut(s)	769, 804
CviAII	CATG	9 cut(s)	85, 322, 506, 685, 784, 796, 808, 1247, 1291
CviQI	GTAC	2 cut(s)	160, 709
DdeI	CTNAG	5 cut(s)	52, 245, 426, 863, 1413
DpnI	GATC	7 cut(s)	618, 828, 861, 908, 933, 993, 1140
DpnII	GATC	7 cut(s)	616, 826, 859, 906, 931, 991, 1138
Eam1104I	CTCTTC	4 cut(s)	330, 434, 842, 1521
EarI	CTCTTC	4 cut(s)	330, 434, 842, 1521
Ecl136II	GAGCTC	1 cut(s)	603
Eco130I	CCWWGG	3 cut(s)	355, 395, 731
Eco24I	GRGCYC	2 cut(s)	53, 605
Eco31I	GGTCTC	2 cut(s)	629, 1277
Eco53kI	GAGCTC	1 cut(s)	603
EcoICRI	GAGCTC	1 cut(s)	603
EcoRI	GAATTC	1 cut(s)	350
EcoRII	CCWGG	3 cut(s)	380, 763, 1035
EcoT14I	CCWWGG	3 cut(s)	355, 395, 731
EcoT38I	GRGCYC	2 cut(s)	53, 605
ErhI	CCWWGG	3 cut(s)	355, 395, 731
Esp3I	CGTCTC	1 cut(s)	436
FaeI	CATG	9 cut(s)	88, 325, 509, 688, 787, 799, 811, 1250, 1294
FatI	CATG	9 cut(s)	84, 321, 505, 684, 783, 795, 807, 1246, 1290
FauI	CCCGC	1 cut(s)	732
FbaI	TGATCA	1 cut(s)	616
Fnu4HI	GCNGC	1 cut(s)	792
FokI	GGATG	6 cut(s)	25, 155, 218, 338, 1177, 1355
FriOI	GRGCYC	2 cut(s)	53, 605
Fsp4HI	GCNGC	1 cut(s)	792
FspBI	CTAG	3 cut(s)	311, 396, 1379
GlaI	GCGC	2 cut(s)	212, 391
GluI	GCNGC	1 cut(s)	792
HaeIII	GGCC	3 cut(s)	40, 760, 942
HapII	CCGG	3 cut(s)	195, 475, 771
HgaI	GACGC	1 cut(s)	477
HhaI	GCGC	2 cut(s)	213, 392
Hin1I	GRCGYC	1 cut(s)	469
Hin1II	CATG	9 cut(s)	88, 325, 509, 688, 787, 799, 811, 1250, 1294
Hin6I	GCGC	2 cut(s)	211, 390
HinP1I	GCGC	2 cut(s)	211, 390
HindIII	AAGCTT	1 cut(s)	554
HinfI	GANTC	3 cut(s)	538, 1101, 1511
HpaII	CCGG	3 cut(s)	195, 475, 771
HphI	GGTGA	5 cut(s)	83, 217, 352, 611, 1106
Hpy166II	GTNNAC	5 cut(s)	225, 780, 926, 1113, 1456
Hpy188I	TCNGA	5 cut(s)	117, 433, 864, 1259, 1541
Hpy188III	TCNNGA	8 cut(s)	7, 500, 579, 685, 724, 808, 830, 1379
Hpy8I	GTNNAC	5 cut(s)	225, 780, 926, 1113, 1456
HpyCH4III	ACNGT	1 cut(s)	844
HpyCH4IV	ACGT	2 cut(s)	445, 1270
HpyCH4V	TGCA	5 cut(s)	205, 626, 1031, 1145, 1220
HpyF10VI	GCNNNNNNNGC	5 cut(s)	246, 553, 1032, 1307, 1490
HpyF3I	CTNAG	5 cut(s)	52, 245, 426, 863, 1413
HpySE526I	ACGT	2 cut(s)	445, 1270
Hsp92I	GRCGYC	1 cut(s)	469
Hsp92II	CATG	9 cut(s)	88, 325, 509, 688, 787, 799, 811, 1250, 1294
HspAI	GCGC	2 cut(s)	211, 390
KroI	GCCGGC	1 cut(s)	194
KroNI	GCCGGC	1 cut(s)	196
Ksp22I	TGATCA	1 cut(s)	616
Kzo9I	GATC	7 cut(s)	616, 826, 859, 906, 931, 991, 1138
LguI	GCTCTTC	1 cut(s)	842
LmnI	GCTCC	4 cut(s)	117, 600, 608, 649
Lsp1109I	GCAGC	1 cut(s)	778
LweI	GCATC	2 cut(s)	1311, 1333
MaeI	CTAG	3 cut(s)	311, 396, 1379
MaeII	ACGT	2 cut(s)	445, 1270
MaeIII	GTNAC	2 cut(s)	340, 1039
MalI	GATC	7 cut(s)	618, 828, 861, 908, 933, 993, 1140
MboI	GATC	7 cut(s)	616, 826, 859, 906, 931, 991, 1138
MflI	RGATCY	1 cut(s)	991
MhlI	GDGCHC	2 cut(s)	53, 605
MluCI	AATT	8 cut(s)	174, 350, 1120, 1234, 1250, 1315, 1364, 1475
MlyI	GAGTC	2 cut(s)	547, 1520
MmeI	TCCRAC	1 cut(s)	1019
MroNI	GCCGGC	1 cut(s)	194
MseI	TTAA	4 cut(s)	140, 363, 564, 1440
MslI	CAYNNNNRTG	1 cut(s)	644
MspA1I	CMGCKG	1 cut(s)	1301
MspI	CCGG	3 cut(s)	195, 475, 771
MspR9I	CCNGG	4 cut(s)	382, 476, 765, 1037
Mva1269I	GAATGC	1 cut(s)	1205
MvaI	CCWGG	3 cut(s)	382, 765, 1037
MwoI	GCNNNNNNNGC	5 cut(s)	246, 553, 1032, 1307, 1490
NaeI	GCCGGC	1 cut(s)	196
NciI	CCSGG	1 cut(s)	476
NdeII	GATC	7 cut(s)	616, 826, 859, 906, 931, 991, 1138
NgoMIV	GCCGGC	1 cut(s)	194
NlaIII	CATG	9 cut(s)	88, 325, 509, 688, 787, 799, 811, 1250, 1294
NlaIV	GGNNCC	4 cut(s)	119, 651, 769, 993
NmuCI	GTSAC	1 cut(s)	340
PagI	TCATGA	2 cut(s)	684, 807
PciSI	GCTCTTC	1 cut(s)	842
PctI	GAATGC	1 cut(s)	1205
PdiI	GCCGGC	1 cut(s)	196
PfeI	GAWTC	1 cut(s)	1101
PfoI	TCCNGGA	1 cut(s)	380
PinAI	ACCGGT	1 cut(s)	770
PkrI	GCNGC	1 cut(s)	793
PleI	GAGTC	2 cut(s)	546, 1519
PpsI	GAGTC	2 cut(s)	546, 1519
PsiI	TTATAA	1 cut(s)	450
Psp124BI	GAGCTC	1 cut(s)	605
Psp1406I	AACGTT	1 cut(s)	1270
Psp6I	CCWGG	3 cut(s)	380, 763, 1035
PspGI	CCWGG	3 cut(s)	380, 763, 1035
PspN4I	GGNNCC	4 cut(s)	119, 651, 769, 993
PspPI	GGNCC	2 cut(s)	758, 940
PsuI	RGATCY	1 cut(s)	991
PvuII	CAGCTG	1 cut(s)	1301
RsaI	GTAC	2 cut(s)	161, 710
RsaNI	GTAC	2 cut(s)	160, 709
RseI	CAYNNNNRTG	1 cut(s)	644
SacI	GAGCTC	1 cut(s)	605
SapI	GCTCTTC	1 cut(s)	842
SaqAI	TTAA	4 cut(s)	140, 363, 564, 1440
SatI	GCNGC	1 cut(s)	792
Sau3AI	GATC	7 cut(s)	616, 826, 859, 906, 931, 991, 1138
Sau96I	GGNCC	2 cut(s)	758, 940
ScaI	AGTACT	1 cut(s)	710
SchI	GAGTC	2 cut(s)	547, 1520
ScrFI	CCNGG	4 cut(s)	382, 476, 765, 1037
SduI	GDGCHC	2 cut(s)	53, 605
SfaNI	GCATC	2 cut(s)	1311, 1333
SfcI	CTRYAG	1 cut(s)	261
SmiMI	CAYNNNNRTG	1 cut(s)	644
SmlI	CTYRAG	1 cut(s)	5
SmoI	CTYRAG	1 cut(s)	5
Sse9I	AATT	8 cut(s)	174, 350, 1120, 1234, 1250, 1315, 1364, 1475
SsiI	CCGC	4 cut(s)	228, 739, 1089, 1515
SspI	AATATT	1 cut(s)	404
SspMI	CTAG	3 cut(s)	311, 396, 1379
SstI	GAGCTC	1 cut(s)	605
StyD4I	CCNGG	4 cut(s)	380, 474, 763, 1035
StyI	CCWWGG	3 cut(s)	355, 395, 731
TaaI	ACNGT	1 cut(s)	844
TaiI	ACGT	2 cut(s)	448, 1273
TaqI	TCGA	1 cut(s)	909
TasI	AATT	8 cut(s)	174, 350, 1120, 1234, 1250, 1315, 1364, 1475
TatI	WGTACW	1 cut(s)	708
TfiI	GAWTC	1 cut(s)	1101
Tru1I	TTAA	4 cut(s)	140, 363, 564, 1440
Tru9I	TTAA	4 cut(s)	140, 363, 564, 1440
TscAI	CASTG	6 cut(s)	60, 220, 540, 849, 862, 1152
TseFI	GTSAC	1 cut(s)	340
TseI	GCWGC	1 cut(s)	791
Tsp45I	GTSAC	1 cut(s)	340
TspGWI	ACGGA	1 cut(s)	595
TspRI	CASTG	6 cut(s)	60, 220, 540, 849, 862, 1152
XapI	RAATTY	4 cut(s)	174, 350, 1234, 1315
XbaI	TCTAGA	1 cut(s)	1378
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1123
XmaJI	CCTAGG	1 cut(s)	395
XspI	CTAG	3 cut(s)	311, 396, 1379
ZrmI	AGTACT	1 cut(s)	710

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.