Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb7

Orthogroup ID

OG0002358

Physical Location & Seq

Genomic Coordinates Reverse (-)

5057701 .. 5074492

Gene Structure 16792 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_7g04530.t4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3159 bp

ATGGAGGGGTTAAGGCAACTGGAGGCTTTGTGTGAGAGGTTGTACAATTCGCAGGACTCGGTAGAACGAGCCCATGCCGAAAACACTCTCAAATGCTTTTCTGTCAACATTGAATACATTTCGCAATGCCAATACATTCTCGACAATGCCATGACTCCCTATGCTCTGATGCTCGCTAGTTCTAGTCTGTTGAAGCAAGTCACTGATCACAGTCTCGCATTGCAGCTTCGTCTCGATATCCGGAGCTACCTTGTTAACTATCTGGCTACTAGAGGACCTGAGTTGCAGCCGTTTGTTACTGCTTCCTTGATACAACTTTTGTGTCGGCTCACCAAGTTTGGGTGGTTTGATGATGACAGATTCAAGGATGTGGTTAAAGAGTCCATGAACTTCTTGAATCAGGCAACTTCTGATCACTATGCCATTGGTTTGAAGATATTGAACCAACTCGTGTCTGAGATGAATCAGCCTAATCCAGGGTTGCCTTCAACGCATCATCGAAGGGTTGCCTGCAACTTCAGGGATCAGTCTCTTTTCCAAATATTTCAAATTTCTTTAACTTCATTGCGTCAACTGGAAAACAATGTTGAAAGTCGATTGCGAGAGTTGGCTCTTTCCCTTTCTCTGAAATGCTTATCTTTTGATTTTGTTGGGACATCCGTTGATGAAAGTTCAGAAGAATTTGGAACTGTTCAGATCCCAACTTCTTGGAGGTCTGTTTTGGAGGATCCTTCAACACTTCAAGTCTTCTTCGATTACTATGCCATTACAAAGGCCCCTCTGTCAAAGGAGGCACTTGAGTGCTTGGTGCGACTGGCTTCTGTTAGACGATCTTTGTTTACAAACGATGCTGCTCGTTCGAAGTTTCTGGCCCATTTGATGACAGGAACCAAAGAAATCCTACAAACAGGGCAAGGTCTTGCTGATCATGATAATTACCATGAGTATTGCCGTCTTCTTGGTCGTTTCAGAGTTAATTATCAGTTGTCAGAGCTTGTGAATGTGGAAGGTTATAGTGACTGGATCCGATTGGTAGCAGAGTTCACGCTAAAGTCTTTGCAGTCCTGGAAGTGGGCCAGCAGCAGTGTATATTACCTCTTAGGACTGTGGTCTAGATTGGTGACATCTGTACCATACTTGAAAGGCGAGGCACCCAGCTTACTTGAAGAATTTGTGCCTAAGATTGCCGAAAGTTTCATCACATCCAGATTTAACTCTGTTCAGGATGGATCTCCAGATGATCTTTCTGAAAACCCACTAGACAATGTTGAACTTCTTCAGGATCAGTTGGATTGCTTCCCATACCTCTGCAGATTCCAGTACGAGAGCAGTAGTTTATTTATAATAAACACAGTGGAACCCATTTTACAAGTATACACGGAAAGAGCTCGCACGCAGCCCAGTGAAATCAGCGACCTCTCTGTTATTGAAGCCAAACTTGCTTGGATTGTTCATATTGTGGCTGCTATTCTTAAGATAAAACAATGTACTGGGTGCAGTGCTGAGTCACAAGAACTATTTGATGCGGAGCTTTCAGCTCGCATCTTGCAATTGATTAATGTCACTGACAGTGGGGTACACAGCCAGAGATATGGTGAAATAAGCAAGCAAAGACTTGACCGTGCAATTCTTACATTTTTCCAACATTTTCGGAAGTCTTATGTTGGTGATCAGGCCATGCATTCTTCAAAGCAGTTGTATGCGCGCCTTTCTGAACTTCTTGGGCTACATGATCATCTTTTAATGTTGAATGTGATTGTTGGAAAGATTGCTACAAATCTGAAATGTTACACTGAGAGTGAGGAGGTCATTGGTCACACCTTGAGTTTGTTCTTGGAGCTGGCATCTGGATACATGACTGGCAAGCTGCTTTTGAAGTTGGATACTGTTAAATTTATAGTGTCCAATCATACTAGGGAACACTTCCCCTTTTTAGAAGAATACAGATGTTCTCGTAGTAGAACAACTTTCTATTTTACAATTGGTTGGCTAATATTCATGGAAGACAGCCCTGTGAAGTTTAAATCTTCAATGGATCCACTTTTGCAAGTTTTTATCAATTTGGAATCAACTCCTGATGCAATGTTTCGCACGGATAATGTAAAGTATGCACTCATCGGGCTGATGAGGGATCTTCGAGGAATCGCTATGGCCACAAATAGTCGCAGAACGTTTGGGCTTCTTTTTGATTGGCTGTATCCTGCACACATGCCACTTCTTTTGAAAGGCATCTTGCACTGGTCTGACACACCAGAGGTTACTACCCCTTTGTTGAAATTCATGGCTGAGTTTGTACTCAACAAAGCCCAACGCTTGATTTTTGACTCATCTTCTCCTAATGGCATACTTCTTTTCCGAGAAGTCAGTAAACTGGTTGTTGCTTATGGATCAAGGATTTTGTCTCTTCCAAATGTTGCTGATATATATGCCTTCAAATACAAGGGAATATGGATTTCTTTAACTATTCTAACGAGAGCTCTTGCTGGAAACTATGTCAACTTTGGGGTGTTTGAGCTATATGGTGATAGAGCACTTGCTGATGCACTTGATATTGCACTAAAGTTGGCATTATCAATTCCTTTGGCCGATATATTGGCATTCCGGAAGCTGACAAGAGCCTACTTTGCGTTTTTAGAGGTCTTATTCAACAGCCACATAGTTTACATACTGAATCTGGATACCAGTACTTTTATGCATATCGTCGGATCTCTTGAATCTGGCCTCAAAGGTCTAGATACAAGTATCTCATCACAGTGTGCGTCCGCTGTTGATAATTTGGCTGCCTTTTATTTTAACAACATTACCATGGGCGAGGCACCTACATTACCTACTGCAGTAAATCTTGCTCGTCATATTGCAGACTGCCCCAATTTGTTTCCAGAAATACTAAAGACTCTGTTTGAGATTGTTTTATTCGAGGACTGTGGCAACCAGTGGAGTCTTAGCAGACCAATGCTGAGCTTAATTCTAATTAGTGAACAGATATTCTCTGATTTGAAAGTCCGGATCATGGCTTCACAGCCAGCGGATCATCACCAACGGCTTTCCCTGTGTTTTGACAAACTAATGGCAGATGTTACTAGAAGCTTGGATTCAAAAAACAGGGACAAGTTCACCCAAAACCTCACTGTATTCAGGAATGATTTTCGTGTGAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005049 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005643 GO:0005737 GO:0006611 GO:0006810 GO:0006886 GO:0006913 GO:0008104 GO:0008150 GO:0008536 GO:0012505 GO:0015031 GO:0015833 GO:0017016 GO:0019899 GO:0031267 GO:0031967 GO:0031975 GO:0032991 GO:0033036 GO:0034613 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045184 GO:0046907 GO:0051020 GO:0051168 GO:0051169 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0070727 GO:0071702 GO:0071705 GO:0140104 GO:0140142

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

IBN_N

Protein Analysis

1053

Amino Acids

119.66

Weight (kDa)

6.05

Isoelectric Point (pI)

42.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_XPO7	PF25795	119 - 359	8e-96	Exportin-7-like, TPR repeats

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002358)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G06120 AT5G06120 AT5G06120 AT5G06120 AT5G06120 AT5G06120 AT5G06120 AT5G06120 AT5G06120 AT5G06120
fragaria_vesca	FvH4_7g04530 FvH4_7g04530 FvH4_7g04530 FvH4_7g04530 FvH4_7g04530 FvH4_7g04530 FvH4_7g04530 FvH4_7g04530 FvH4_7g04530
malus_domestica	MD02G1207800.v1.1 MD07G1118000.v1.1
prunus_persica	Prupe.2G050900_v2.0.a1 Prupe.2G050900_v2.0.a1 Prupe.2G050900_v2.0.a1 Prupe.2G050900_v2.0.a1 Prupe.2G051400_v2.0.a1
pyrus_communis	pycom02g17010 pycom07g10620
rosa_chinensis	RchiOBHm_Chr1g0329811
rosa_laevigata	RLG00000029862
rosa_multiflora	Rmu_co8519431.1_g000001 Rmu_sc0003459.1_g000016
rosa_roxburghii	Rroxscaffold_4G00320670
rosa_rugosa	Rorug01G0083100 Rorug01G0083200 Rorug01G0083300 Rorug01G0083400
rosa_samantha	Rh1AG101400 Rh1BG080600 Rh1CG097100 Rh1DG104700
rosa_wichuraiana	Rw1G008010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1343
AccB1I	GGYRCC	2 cut(s)	1150, 2815
AccI	GTMKAC	1 cut(s)	1374
AccII	CGCG	1 cut(s)	1705
AccIII	TCCGGA	3 cut(s)	240, 2601, 3003
AciI	CCGC	3 cut(s)	1526, 2763, 3026
AclI	AACGTT	1 cut(s)	2171
AcoI	YGGCCR	2 cut(s)	2151, 2583
AcsI	RAATTY	5 cut(s)	549, 680, 1169, 1892, 2276
AcuI	CTGAAG	2 cut(s)	502, 1262
AdeI	CACNNNGTG	1 cut(s)	2756
AfaI	GTAC	7 cut(s)	44, 1131, 1322, 1489, 1578, 2295, 2686
AfiI	CCNNNNNNNGG	4 cut(s)	339, 476, 1071, 3010
AflII	CTTAAG	1 cut(s)	1472
AjnI	CCWGG	2 cut(s)	475, 1064
AleI	CACNNNNGTG	1 cut(s)	799
Alw21I	GWGCWC	3 cut(s)	1390, 2479, 2533
Alw26I	GTCTC	4 cut(s)	218, 236, 534, 2406
Aor13HI	TCCGGA	3 cut(s)	240, 2601, 3003
AoxI	GGCC	7 cut(s)	774, 870, 1074, 1674, 2151, 2583, 2719
ApeKI	GCWGC	8 cut(s)	223, 286, 851, 1080, 1396, 1463, 1867, 2780
ApoI	RAATTY	5 cut(s)	549, 680, 1169, 1892, 2276
AseI	ATTAAT	1 cut(s)	1557
Asp700I	GAANNNNTTC	1 cut(s)	1275
AspLEI	GCGC	2 cut(s)	1705, 1707
AspS9I	GGNCC	4 cut(s)	275, 775, 871, 1074
AsuHPI	GGTGA	7 cut(s)	322, 1132, 1607, 1679, 2534, 3026, 3106
AsuII	TTCGAA	1 cut(s)	860
AvaII	GGWCC	1 cut(s)	275
BaeI	ACNNNNGTAYC	2 cut(s)	1113, 1146
BalI	TGGCCA	1 cut(s)	2153
BamHI	GGATCC	3 cut(s)	727, 1023, 2035
BanI	GGYRCC	2 cut(s)	1150, 2815
BanII	GRGCYC	3 cut(s)	73, 1390, 2479
BauI	CACGAG	1 cut(s)	449
BbsI	GAAGAC	3 cut(s)	739, 947, 2010
Bbv12I	GWGCWC	3 cut(s)	1390, 2479, 2533
BbvI	GCAGC	8 cut(s)	235, 298, 838, 1092, 1408, 1450, 1854, 2767
BccI	CCATC	1 cut(s)	1220
BceAI	ACGGC	3 cut(s)	274, 936, 3056
BcgI	CGANNNNNNTGC	2 cut(s)	743, 777
BciT130I	CCWGG	2 cut(s)	477, 1066
BciVI	GTATCC	4 cut(s)	1844, 1876, 2208, 2671
BclI	TGATCA	5 cut(s)	205, 412, 925, 1669, 1732
BcoDI	GTCTC	4 cut(s)	218, 236, 534, 2406
BfaI	CTAG	8 cut(s)	177, 183, 270, 1113, 1259, 1914, 2732, 3081
BfmI	CTRYAG	2 cut(s)	1309, 2832
BfrI	CTTAAG	1 cut(s)	1472
BfuI	GTATCC	4 cut(s)	1844, 1876, 2208, 2671
BisI	GCNGC	8 cut(s)	224, 287, 852, 1081, 1397, 1464, 1868, 2781
BlpI	GCTNAGC	1 cut(s)	2957
BlsI	GCNGC	8 cut(s)	225, 288, 853, 1082, 1398, 1465, 1869, 2782
BmcAI	AGTACT	1 cut(s)	2686
Bme1390I	CCNGG	2 cut(s)	477, 1066
Bme18I	GGWCC	1 cut(s)	275
BmgT120I	GGNCC	4 cut(s)	275, 775, 871, 1074
BmiI	GGNNCC	8 cut(s)	729, 777, 889, 1025, 1152, 1359, 2037, 2817
BmrFI	CCNGG	2 cut(s)	477, 1066
BmrI	ACTGGG	2 cut(s)	1395, 1500
BmsI	GCATC	9 cut(s)	159, 502, 838, 1513, 1551, 1853, 2068, 2238, 2530
BmuI	ACTGGG	2 cut(s)	1395, 1500
BoxI	GACNNNNGTC	1 cut(s)	1108
BpiI	GAAGAC	3 cut(s)	739, 947, 2010
BpmI	CTGGAG	2 cut(s)	41, 1218
Bpu1102I	GCTNAGC	1 cut(s)	2957
Bpu14I	TTCGAA	1 cut(s)	860
BpuEI	CTTGAG	2 cut(s)	818, 1843
BsaJI	CCNNGG	2 cut(s)	476, 2805
BsaWI	WCCGGW	3 cut(s)	240, 2601, 3003
BsaXI	ACNNNNNCTCC	2 cut(s)	14, 44
Bsc4I	CCNNNNNNNGG	4 cut(s)	339, 476, 1071, 3010
Bse3DI	GCAATG	4 cut(s)	131, 218, 563, 2088
BseAI	TCCGGA	3 cut(s)	240, 2601, 3003
BseBI	CCWGG	2 cut(s)	477, 1066
BseDI	CCNNGG	2 cut(s)	476, 2805
BseGI	GGATG	4 cut(s)	373, 656, 1202, 1231
BseLI	CCNNNNNNNGG	4 cut(s)	339, 476, 1071, 3010
BseMI	GCAATG	4 cut(s)	131, 218, 563, 2088
BseMII	CTCAG	6 cut(s)	270, 447, 1494, 1785, 2277, 2948
BsePI	GCGCGC	1 cut(s)	1703
BseRI	GAGGAG	1 cut(s)	1817
BseXI	GCAGC	8 cut(s)	235, 298, 838, 1092, 1408, 1450, 1854, 2767
BseYI	CCCAGC	1 cut(s)	1154
BsgI	GTGCAG	2 cut(s)	1516, 2187
Bsh1236I	CGCG	1 cut(s)	1705
BshFI	GGCC	7 cut(s)	776, 872, 1076, 1676, 2153, 2585, 2721
BshNI	GGYRCC	2 cut(s)	1150, 2815
BsiHKAI	GWGCWC	3 cut(s)	1390, 2479, 2533
BsiSI	CCGG	3 cut(s)	241, 2602, 3004
BslFI	GGGAC	2 cut(s)	667, 3119
BslI	CCNNNNNNNGG	4 cut(s)	339, 476, 1071, 3010
BsmAI	GTCTC	4 cut(s)	218, 236, 534, 2406
BsmBI	CGTCTC	1 cut(s)	236
BsmFI	GGGAC	2 cut(s)	667, 3119
BsmI	GAATGC	2 cut(s)	1681, 2597
BsnI	GGCC	7 cut(s)	776, 872, 1076, 1676, 2153, 2585, 2721
Bsp119I	TTCGAA	1 cut(s)	860
Bsp1286I	GDGCHC	4 cut(s)	73, 1390, 2479, 2533
Bsp13I	TCCGGA	3 cut(s)	240, 2601, 3003
Bsp1407I	TGTACA	1 cut(s)	42
Bsp1720I	GCTNAGC	1 cut(s)	2957
Bsp19I	CCATGG	1 cut(s)	2805
BspACI	CCGC	3 cut(s)	1526, 2763, 3026
BspANI	GGCC	7 cut(s)	776, 872, 1076, 1676, 2153, 2585, 2721
BspCNI	CTCAG	6 cut(s)	271, 448, 1495, 1786, 2278, 2949
BspEI	TCCGGA	3 cut(s)	240, 2601, 3003
BspFNI	CGCG	1 cut(s)	1705
BspHI	TCATGA	1 cut(s)	928
BspLI	GGNNCC	8 cut(s)	729, 777, 889, 1025, 1152, 1359, 2037, 2817
BspMAI	CTGCAG	2 cut(s)	1313, 2836
BspT104I	TTCGAA	1 cut(s)	860
BspT107I	GGYRCC	2 cut(s)	1150, 2815
BspTI	CTTAAG	1 cut(s)	1472
BsrDI	GCAATG	4 cut(s)	131, 218, 563, 2088
BsrGI	TGTACA	1 cut(s)	42
BssECI	CCNNGG	2 cut(s)	476, 2805
BssHII	GCGCGC	1 cut(s)	1703
BssNAI	GTATAC	1 cut(s)	1375
BssSI	CACGAG	1 cut(s)	449
BssT1I	CCWWGG	1 cut(s)	2805
Bst1107I	GTATAC	1 cut(s)	1375
Bst2BI	CACGAG	1 cut(s)	449
Bst2UI	CCWGG	2 cut(s)	477, 1066
Bst6I	CTCTTC	1 cut(s)	2409
BstAFI	CTTAAG	1 cut(s)	1472
BstAUI	TGTACA	1 cut(s)	42
BstBI	TTCGAA	1 cut(s)	860
BstDEI	CTNAG	9 cut(s)	279, 456, 1099, 1179, 1503, 1794, 2286, 2942, 2957
BstDSI	CCRYGG	1 cut(s)	2805
BstENI	CCTNNNNNAGG	1 cut(s)	474
BstF5I	GGATG	4 cut(s)	373, 656, 1202, 1231
BstFNI	CGCG	1 cut(s)	1705
BstHHI	GCGC	2 cut(s)	1705, 1707
BstMAI	GTCTC	4 cut(s)	218, 236, 534, 2406
BstMWI	GCNNNNNNNGC	3 cut(s)	490, 1439, 2624
BstNI	CCWGG	2 cut(s)	477, 1066
BstNSI	RCATGY	1 cut(s)	2212
BstPAI	GACNNNNGTC	1 cut(s)	1108
BstSCI	CCNGG	2 cut(s)	475, 1064
BstSFI	CTRYAG	2 cut(s)	1309, 2832
BstUI	CGCG	1 cut(s)	1705
BstV1I	GCAGC	8 cut(s)	235, 298, 838, 1092, 1408, 1450, 1854, 2767
BstV2I	GAAGAC	3 cut(s)	739, 947, 2010
BstX2I	RGATCY	7 cut(s)	696, 727, 1023, 1229, 2035, 2131, 2705
BstXI	CCANNNNNNTGG	2 cut(s)	708, 1592
BstYI	RGATCY	7 cut(s)	696, 727, 1023, 1229, 2035, 2131, 2705
BstZ17I	GTATAC	1 cut(s)	1375
BsuI	GTATCC	4 cut(s)	1844, 1876, 2208, 2671
BsuRI	GGCC	7 cut(s)	776, 872, 1076, 1676, 2153, 2585, 2721
BtgI	CCRYGG	1 cut(s)	2805
BtsCI	GGATG	4 cut(s)	373, 656, 1202, 1231
BtsI	GCAGTG	2 cut(s)	1090, 1504
CciI	TCATGA	1 cut(s)	928
CfoI	GCGC	2 cut(s)	1705, 1707
Cfr13I	GGNCC	4 cut(s)	275, 775, 871, 1074
CseI	GACGC	2 cut(s)	557, 2748
Csp6I	GTAC	7 cut(s)	43, 1130, 1321, 1488, 1577, 2294, 2685
CspCI	CAANNNNNGTGG	2 cut(s)	2202, 2237
CviQI	GTAC	7 cut(s)	43, 1130, 1321, 1488, 1577, 2294, 2685
DdeI	CTNAG	9 cut(s)	279, 456, 1099, 1179, 1503, 1794, 2286, 2942, 2957
DraI	TTTAAA	1 cut(s)	2023
DraIII	CACNNNGTG	1 cut(s)	2756
EaeI	YGGCCR	2 cut(s)	2151, 2583
Eam1104I	CTCTTC	1 cut(s)	2409
EarI	CTCTTC	1 cut(s)	2409
Ecl136II	GAGCTC	2 cut(s)	1388, 2477
Eco130I	CCWWGG	1 cut(s)	2805
Eco24I	GRGCYC	3 cut(s)	73, 1390, 2479
Eco32I	GATATC	1 cut(s)	238
Eco47I	GGWCC	1 cut(s)	275
Eco53kI	GAGCTC	2 cut(s)	1388, 2477
Eco57I	CTGAAG	2 cut(s)	502, 1262
EcoICRI	GAGCTC	2 cut(s)	1388, 2477
EcoNI	CCTNNNNNAGG	1 cut(s)	474
EcoO109I	RGGNCCY	2 cut(s)	275, 775
EcoRII	CCWGG	2 cut(s)	475, 1064
EcoRV	GATATC	1 cut(s)	238
EcoT14I	CCWWGG	1 cut(s)	2805
EcoT22I	ATGCAT	2 cut(s)	1683, 2697
EcoT38I	GRGCYC	3 cut(s)	73, 1390, 2479
ErhI	CCWWGG	1 cut(s)	2805
Esp3I	CGTCTC	1 cut(s)	236
FalI	AAGNNNNNCTT	2 cut(s)	1422, 1454
FaqI	GGGAC	2 cut(s)	667, 3119
FbaI	TGATCA	5 cut(s)	205, 412, 925, 1669, 1732
FblI	GTMKAC	1 cut(s)	1374
Fnu4HI	GCNGC	8 cut(s)	224, 287, 852, 1081, 1397, 1464, 1868, 2781
FokI	GGATG	4 cut(s)	380, 643, 1189, 1238
FriOI	GRGCYC	3 cut(s)	73, 1390, 2479
Fsp4HI	GCNGC	8 cut(s)	224, 287, 852, 1081, 1397, 1464, 1868, 2781
FspBI	CTAG	8 cut(s)	177, 183, 270, 1113, 1259, 1914, 2732, 3081
GlaI	GCGC	2 cut(s)	1704, 1706
GluI	GCNGC	8 cut(s)	224, 287, 852, 1081, 1397, 1464, 1868, 2781
GsaI	CCCAGC	1 cut(s)	1158
GsuI	CTGGAG	2 cut(s)	41, 1218
HaeIII	GGCC	7 cut(s)	776, 872, 1076, 1676, 2153, 2585, 2721
HapII	CCGG	3 cut(s)	241, 2602, 3004
HgaI	GACGC	2 cut(s)	557, 2748
HhaI	GCGC	2 cut(s)	1705, 1707
Hin6I	GCGC	2 cut(s)	1703, 1705
HinP1I	GCGC	2 cut(s)	1703, 1705
HincII	GTYRAC	4 cut(s)	106, 256, 572, 2497
HindII	GTYRAC	4 cut(s)	106, 256, 572, 2497
HindIII	AAGCTT	1 cut(s)	3085
HpaI	GTTAAC	1 cut(s)	256
HpaII	CCGG	3 cut(s)	241, 2602, 3004
HphI	GGTGA	7 cut(s)	322, 1132, 1607, 1679, 2534, 3026, 3106
Hpy99I	CGWCG	1 cut(s)	2705
HpyAV	CCTTC	5 cut(s)	495, 495, 741, 1001, 2440
HpyCH4IV	ACGT	1 cut(s)	2171
HpyF10VI	GCNNNNNNNGC	3 cut(s)	490, 1439, 2624
HpyF3I	CTNAG	9 cut(s)	279, 456, 1099, 1179, 1503, 1794, 2286, 2942, 2957
HpySE526I	ACGT	1 cut(s)	2171
HspAI	GCGC	2 cut(s)	1703, 1705
Kpn2I	TCCGGA	3 cut(s)	240, 2601, 3003
Ksp22I	TGATCA	5 cut(s)	205, 412, 925, 1669, 1732
KspAI	GTTAAC	1 cut(s)	256
LmnI	GCTCC	3 cut(s)	243, 1528, 1837
Lsp1109I	GCAGC	8 cut(s)	235, 298, 838, 1092, 1408, 1450, 1854, 2767
LweI	GCATC	9 cut(s)	159, 502, 838, 1513, 1551, 1853, 2068, 2238, 2530
MaeI	CTAG	8 cut(s)	177, 183, 270, 1113, 1259, 1914, 2732, 3081
MaeII	ACGT	1 cut(s)	2171
MfeI	CAATTG	2 cut(s)	1550, 1980
MflI	RGATCY	7 cut(s)	696, 727, 1023, 1229, 2035, 2131, 2705
MhlI	GDGCHC	4 cut(s)	73, 1390, 2479, 2533
MlsI	TGGCCA	1 cut(s)	2153
MluNI	TGGCCA	1 cut(s)	2153
MlyI	GAGTC	7 cut(s)	50, 148, 389, 1514, 2318, 2887, 2947
MmeI	TCCRAC	5 cut(s)	1269, 1666, 1741, 1860, 2683
Mox20I	TGGCCA	1 cut(s)	2153
Mph1103I	ATGCAT	2 cut(s)	1683, 2697
MroI	TCCGGA	3 cut(s)	240, 2601, 3003
MroXI	GAANNNNTTC	1 cut(s)	1275
MscI	TGGCCA	1 cut(s)	2153
MslI	CAYNNNNRTG	3 cut(s)	799, 2752, 2804
Msp20I	TGGCCA	1 cut(s)	2153
MspA1I	CMGCKG	2 cut(s)	2765, 3026
MspCI	CTTAAG	1 cut(s)	1472
MspI	CCGG	3 cut(s)	241, 2602, 3004
MspR9I	CCNGG	2 cut(s)	477, 1066
MunI	CAATTG	2 cut(s)	1550, 1980
Mva1269I	GAATGC	2 cut(s)	1681, 2597
MvaI	CCWGG	2 cut(s)	477, 1066
MvnI	CGCG	1 cut(s)	1705
MwoI	GCNNNNNNNGC	3 cut(s)	490, 1439, 2624
NcoI	CCATGG	1 cut(s)	2805
NlaIV	GGNNCC	8 cut(s)	729, 777, 889, 1025, 1152, 1359, 2037, 2817
NmuCI	GTSAC	6 cut(s)	199, 1016, 1120, 1506, 1561, 1814
NsiI	ATGCAT	2 cut(s)	1683, 2697
NspI	RCATGY	1 cut(s)	2212
NspV	TTCGAA	1 cut(s)	860
OliI	CACNNNNGTG	1 cut(s)	799
PagI	TCATGA	1 cut(s)	928
PauI	GCGCGC	1 cut(s)	1703
PctI	GAATGC	2 cut(s)	1681, 2597
PdmI	GAANNNNTTC	1 cut(s)	1275
PfeI	GAWTC	9 cut(s)	360, 397, 463, 1314, 2066, 2142, 2671, 2714, 3092
PfoI	TCCNGGA	1 cut(s)	1064
PkrI	GCNGC	8 cut(s)	225, 288, 853, 1082, 1398, 1465, 1869, 2782
PleI	GAGTC	7 cut(s)	50, 148, 388, 1513, 2318, 2887, 2946
PpsI	GAGTC	7 cut(s)	50, 148, 388, 1513, 2318, 2887, 2946
PpuMI	RGGWCCY	1 cut(s)	275
PshAI	GACNNNNGTC	1 cut(s)	1108
PshBI	ATTAAT	1 cut(s)	1557
PsiI	TTATAA	1 cut(s)	1343
Psp124BI	GAGCTC	2 cut(s)	1390, 2479
Psp1406I	AACGTT	1 cut(s)	2171
Psp5II	RGGWCCY	1 cut(s)	275
Psp6I	CCWGG	2 cut(s)	475, 1064
PspFI	CCCAGC	1 cut(s)	1154
PspGI	CCWGG	2 cut(s)	475, 1064
PspN4I	GGNNCC	8 cut(s)	729, 777, 889, 1025, 1152, 1359, 2037, 2817
PspPI	GGNCC	4 cut(s)	275, 775, 871, 1074
PspPPI	RGGWCCY	1 cut(s)	275
PsrI	GAACNNNNNNTAC	2 cut(s)	1350, 1382
PstI	CTGCAG	2 cut(s)	1313, 2836
PsuI	RGATCY	7 cut(s)	696, 727, 1023, 1229, 2035, 2131, 2705
PteI	GCGCGC	1 cut(s)	1703
RsaI	GTAC	7 cut(s)	44, 1131, 1322, 1489, 1578, 2295, 2686
RsaNI	GTAC	7 cut(s)	43, 1130, 1321, 1488, 1577, 2294, 2685
RseI	CAYNNNNRTG	3 cut(s)	799, 2752, 2804
SacI	GAGCTC	2 cut(s)	1390, 2479
SatI	GCNGC	8 cut(s)	224, 287, 852, 1081, 1397, 1464, 1868, 2781
Sau96I	GGNCC	4 cut(s)	275, 775, 871, 1074
ScaI	AGTACT	1 cut(s)	2686
SchI	GAGTC	7 cut(s)	50, 148, 389, 1514, 2318, 2887, 2947
ScrFI	CCNGG	2 cut(s)	477, 1066
SduI	GDGCHC	4 cut(s)	73, 1390, 2479, 2533
SfaNI	GCATC	9 cut(s)	159, 502, 838, 1513, 1551, 1853, 2068, 2238, 2530
SfcI	CTRYAG	2 cut(s)	1309, 2832
SfuI	TTCGAA	1 cut(s)	860
SinI	GGWCC	1 cut(s)	275
SmiMI	CAYNNNNRTG	3 cut(s)	799, 2752, 2804
SmlI	CTYRAG	3 cut(s)	797, 1472, 1822
SmoI	CTYRAG	3 cut(s)	797, 1472, 1822
SsiI	CCGC	3 cut(s)	1526, 2763, 3026
SspI	AATATT	2 cut(s)	543, 1995
SspMI	CTAG	8 cut(s)	177, 183, 270, 1113, 1259, 1914, 2732, 3081
SstI	GAGCTC	2 cut(s)	1390, 2479
StyD4I	CCNGG	2 cut(s)	475, 1064
StyI	CCWWGG	1 cut(s)	2805
TaiI	ACGT	1 cut(s)	2174
TaqI	TCGA	8 cut(s)	141, 234, 499, 595, 753, 860, 2137, 2916
TatI	WGTACW	4 cut(s)	42, 1487, 2293, 2684
TfiI	GAWTC	9 cut(s)	360, 397, 463, 1314, 2066, 2142, 2671, 2714, 3092
TseFI	GTSAC	6 cut(s)	199, 1016, 1120, 1506, 1561, 1814
TseI	GCWGC	8 cut(s)	223, 286, 851, 1080, 1396, 1463, 1867, 2780
Tsp45I	GTSAC	6 cut(s)	199, 1016, 1120, 1506, 1561, 1814
TspDTI	ATGAA	8 cut(s)	401, 476, 552, 681, 1186, 1442, 1987, 2269
TspGWI	ACGGA	3 cut(s)	649, 1394, 2108
Vha464I	CTTAAG	1 cut(s)	1472
VpaK11BI	GGWCC	1 cut(s)	275
VspI	ATTAAT	1 cut(s)	1557
XagI	CCTNNNNNAGG	1 cut(s)	474
XapI	RAATTY	5 cut(s)	549, 680, 1169, 1892, 2276
XbaI	TCTAGA	2 cut(s)	1112, 2731
XceI	RCATGY	1 cut(s)	2212
XmiI	GTMKAC	1 cut(s)	1374
XmnI	GAANNNNTTC	1 cut(s)	1275
XspI	CTAG	8 cut(s)	177, 183, 270, 1113, 1259, 1914, 2732, 3081
ZrmI	AGTACT	1 cut(s)	2686
Zsp2I	ATGCAT	2 cut(s)	1683, 2697

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.