Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0002358

Physical Location & Seq

Genomic Coordinates Reverse (-)

50296917 .. 50316000

Gene Structure 19084 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000029862

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3276 bp

ATGGAGCCTCCAGCCATGGCAGCTCGTTTTGTTGAAGACTTGAAGGTGTATCTGGGTGGGAAAGAAAACAATGAAAATAGAGATTTGTCGAATCTCTATAGATCCACCACCACAGCGATGGAGGGGTTAAGGCAACTGGAGGCCTTGTGCGAGAGGTTGTACAATTCGCAGGACTCGGTTGAGCGAGCCCACGCCGAAAACACTCTCAAATGCTTTTCTGTGAACATTGAATACATTTCGCAATGCCAATACATTCTTGATAATGCCATGACGCCGTATGCTCTGATGCTAGCTAGTTCTAGTTTGTTGAAGCAAGTCACTGATCATAGCCTTGCCTTGCAGCTTCGTCTTGATATCCGGAGCTACCTTGTAAACTATCTGGCCACTAGAGGACCTGAGTTGCAGCCGTTCGTTACTGCTTCCTTAATCCAACTCTTATGTCGGCTCACCAAGTTTGGGTGGTTTGACGATGACAGATTCAAGGATGTGGTTAAAGAGTCCATGAACTTCTTGAACCAGGCAACTTCTGATCACTATGCCATTGGTTTGAAGATATTAAACCAACTTGTGTCTGAGATGAATCAGCCTAATCCAGGGTTGCCTTCAACACATCATCGAAGGGTTGCCTGCAACTTCAGGGATCAGTCTCTTTTCCAAATATTCCAGATCTCTTTAACATCATTGCGCCAACTGGAAAACAATGTTGAAAGTCGTTTGCGAGAGTTGGCTCTTTCTCTTTCTCTTAAATGTTTATCTTTTGATTTTGTTGGGACATCAATTGATGAAAGTTCAGAAGAATTTGGTACTGTTCAGATCCCAACTTCTTGGAGGTCAGTTTTGGAGGATCCTTCAACACTTCAAGTCTTCTTCGATTACTATGCCATTACAAAGGCCCCTCTGTCAAAGGAGGCACTGGAGTGCTTGGTGCGATTGGCTTCTGTTAGACGATCTTTGTTTACAAACGATGCTGCTCGTTCAAAGTTTTTGGCCCATTTGATGACAGGAACCAAAGAAATCCTACAAACAGGGCAAGGTCTTGCTGATCATGATAATTACCATGAGTATTGCCGTCTTCTTGGACGTTTCCGAGTTAATTATCAGTTGTCAGAGCTTGTGAATGTGGAAGGTTATAGTGACTGGATTCGATTAGTAGCAGAGTTCACGCTAAAGTCTTTGCAGTCCTGGAAGTGGGCCAGCAGCAGTGTATACTATCTTTTAGGACTGTGGTCTAGATTGGTGACATCTGTACCATACTTGAAAGGCGAGGCACCCAGCTTGCTTGAAGAATTTGTGCCTAAGATTGCCGAAAGTTTCATCACATCGAGATTTAACTCTGTGCAGGATGGATCTTCAGATGATCTTTCTGAAAACCCACTAGACAATGTTGAACTTCTTCAGGATCAGTTAGATTGCTTCCCTTACCTCTGCAGATTCCAGTATGAAGGCAGTAGTTTATATATAATAAACACAGTGGAACCCATTTTACAAACATACACGGAAAGAGCTCGCATGCCGCCCAGTGAAATCAGTGACCTCTCTGTCATTGAAGCCAAACTTGCTTGGATTGTTCATATCGTTGCTGCTATTCTTAAGATAAAACAATGTACTGGTTGTAGTGTTGAGTCACAAGAACTATTTGATGCGGAACTTTCAGCTCGCATCTTGCAATTGATTAATGTTACTGACAGTGGGGTACACAGCCAGAGATATGGTGAAATAAGCAAGCAAAGGCTTGACCGTGCAATTCTTACCTTTTTCCAACATTTTCGGAAGTCTTATGTTGGTGATCAGGCCATGCATTCTTCGAAGCAGTTATATGCGCGCCTTTCTGAACTTCTTGGACTTCATGATCATCTTTTAATGTTGAATGTGATTGTTGGAAAGATTGCTACAAACCTGAAATGTTACACAGAGAGTGAGGAGGTCATTGGTCACACCTTGAGTTTGTTCTTGGAGCTGGCATCTGGATACATGACTGGCAAGCTGCTTTTGAAGTTGGATACTGTTAAATTTATAGTGTCCAATCATACTCGGGAGCACTTCCCCTTTTTAGAAGAATATAGATGTTCTCGTAGTAGAACAACTTTTTATTTTACAATTGGTTGGTTAATATTCATGGAAGACAGCCCTGTGAAGTTTAAATCTTCAATGGATCCACTTTTGCAAGTTTTTATCAATCTCGAATCAACTCCTGATGCAATGTTTCGCACTGATAATGTAAAGTATGCATTAATCGGGCTGATGAGGGATCTTCGGGGAATTGCCATGGCCACAAATAGCCGCAGAACGTTTGGGCTTCTGTTTGATTGGCTGTATCCTGCACACATGCCACTTCTTTTGAAAGGCATCTTGCATTGGTCTGACACACCAGAGGTTACTACCCCTTTGTTGAAATTCATGGCTGAGTTTGTACTGAACAAAGCCCAACGCTTGACATTTGACTCATCTTCTCCTAATGGCATACTTCTTTTCCGAGAAGTCAGTAAACTTATTGTTGCTTATGGGTCAAGGATTCTGTCTCTTCCAAACGTTGCTGATATATATGCCTTCAAATACAAGGGAATATGGATTTCTTTAACTATTCTCACGAGAGCTCTTGCTGGAAACTATGTCAACTTTGGGGTGTTTGAGCTATATGGAGATAGAGCACTTTCTGATGCACTTGATATTGCACTAAAGTTGGCATTATCAATTCCTTTGGCTGATATATTGGCATTCCGCAAGCTGACAAGAGCCTACTTTGCGTTTTTAGAGGTCTTATTCAACAGCCACATAGTTTACATACTGAATCTGGATACCAGTACTTTTATGCATATTGTTGGATCTCTTGAATCTGGCCTCAAAGGTCTAGATACAAGTATCTCATCACAGTGTGCGTCTGCTGTTGATAATTTGGCTGCCTTTTATTTTAACAACATTACCATGGGCGAGGCACCTACATTACCTACTGCAGTAAATCTTGCTCGCCACATTGCAGACTGCCCCAATTTGTTTCCAGAAATACTGAAGACTCTGTTTGAGATTGTTTTATTCGAGGACTGTGGCAACCAGTGGAGTCTGAGCAGACCAATGCTGAGCTTAATTCTTATTAGTGAGCAGATATTCTCTGATTTGAAAGTTCGGATCATGGCTTCACAGCCAGTGGATCATCACCAGCGGCTTTCCCTCTGTTTTGACAAGCTAATGGCAGATGTTACTAGGAGCTTGGATTCAAAGAACAGGGACAAGTTCACTCAAAACCTCACTGTATTCAGAAATGATTTTCGTGTGAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005049 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005643 GO:0005737 GO:0006611 GO:0006810 GO:0006886 GO:0006913 GO:0008104 GO:0008150 GO:0008536 GO:0012505 GO:0015031 GO:0015833 GO:0017016 GO:0019899 GO:0031267 GO:0031967 GO:0031975 GO:0032991 GO:0033036 GO:0034613 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045184 GO:0046907 GO:0051020 GO:0051168 GO:0051169 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0070727 GO:0071702 GO:0071705 GO:0140104 GO:0140142

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

IBN_N

Protein Analysis

1092

Amino Acids

124.11

Weight (kDa)

6.0

Isoelectric Point (pI)

42.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
IBN_N	PF03810	65 - 128	1.8e-07	Importin-beta N-terminal domain
TPR_XPO7	PF25795	450 - 691	2e-95	Exportin-7-like, TPR repeats

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0002358)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G06120 AT5G06120 AT5G06120 AT5G06120 AT5G06120 AT5G06120 AT5G06120 AT5G06120 AT5G06120 AT5G06120
fragaria_vesca	FvH4_7g04530 FvH4_7g04530 FvH4_7g04530 FvH4_7g04530 FvH4_7g04530 FvH4_7g04530 FvH4_7g04530 FvH4_7g04530 FvH4_7g04530
malus_domestica	MD02G1207800.v1.1 MD07G1118000.v1.1
prunus_persica	Prupe.2G050900_v2.0.a1 Prupe.2G050900_v2.0.a1 Prupe.2G050900_v2.0.a1 Prupe.2G050900_v2.0.a1 Prupe.2G051400_v2.0.a1
pyrus_communis	pycom02g17010 pycom07g10620
rosa_chinensis	RchiOBHm_Chr1g0329811
rosa_laevigata	RLG00000029862
rosa_multiflora	Rmu_co8519431.1_g000001 Rmu_sc0003459.1_g000016
rosa_roxburghii	Rroxscaffold_4G00320670
rosa_rugosa	Rorug01G0083100 Rorug01G0083200 Rorug01G0083300 Rorug01G0083400
rosa_samantha	Rh1AG101400 Rh1BG080600 Rh1CG097100 Rh1DG104700
rosa_wichuraiana	Rw1G008010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1538
AccB1I	GGYRCC	2 cut(s)	1267, 2932
AccI	GTMKAC	1 cut(s)	1206
AccII	CGCG	1 cut(s)	1822
AccIII	TCCGGA	1 cut(s)	357
AciI	CCGC	5 cut(s)	1514, 1643, 2281, 2719, 3157
AclI	AACGTT	2 cut(s)	2288, 2529
AcoI	YGGCCR	2 cut(s)	381, 2268
AcsI	RAATTY	4 cut(s)	797, 1286, 2009, 2393
AcuI	CTGAAG	4 cut(s)	619, 1335, 1379, 3026
AcyI	GRCGYC	1 cut(s)	272
AdeI	CACNNNGTG	1 cut(s)	2873
AfaI	GTAC	7 cut(s)	161, 805, 1248, 1606, 1695, 2412, 2803
AfiI	CCNNNNNNNGG	3 cut(s)	456, 593, 1188
AflII	CTTAAG	1 cut(s)	1589
AjnI	CCWGG	3 cut(s)	516, 592, 1181
AleI	CACNNNNGTG	1 cut(s)	916
Alw21I	GWGCWC	4 cut(s)	1507, 2040, 2596, 2650
Alw26I	GTCTC	2 cut(s)	651, 2523
Ama87I	CYCGRG	1 cut(s)	2031
Aor13HI	TCCGGA	1 cut(s)	357
AoxI	GGCC	8 cut(s)	141, 381, 891, 987, 1191, 1791, 2268, 2836
ApeKI	GCWGC	8 cut(s)	20, 340, 403, 968, 1197, 1580, 1984, 2897
ApoI	RAATTY	4 cut(s)	797, 1286, 2009, 2393
AseI	ATTAAT	2 cut(s)	1674, 2231
Asp700I	GAANNNNTTC	1 cut(s)	1392
AspLEI	GCGC	3 cut(s)	687, 1822, 1824
AspS9I	GGNCC	4 cut(s)	392, 892, 988, 1191
AsuHPI	GGTGA	5 cut(s)	439, 1249, 1724, 1796, 3143
AsuII	TTCGAA	1 cut(s)	1805
AsuNHI	GCTAGC	1 cut(s)	289
AvaI	CYCGRG	1 cut(s)	2031
AvaII	GGWCC	1 cut(s)	392
BaeI	ACNNNNGTAYC	2 cut(s)	1230, 1263
BalI	TGGCCA	2 cut(s)	383, 2270
BamHI	GGATCC	2 cut(s)	844, 2152
BanI	GGYRCC	2 cut(s)	1267, 2932
BanII	GRGCYC	3 cut(s)	190, 1507, 2596
BauI	CACGAG	1 cut(s)	2587
BbsI	GAAGAC	5 cut(s)	42, 856, 1064, 2127, 3014
Bbv12I	GWGCWC	4 cut(s)	1507, 2040, 2596, 2650
BbvI	GCAGC	8 cut(s)	32, 352, 415, 955, 1209, 1567, 1971, 2884
BccI	CCATC	2 cut(s)	112, 1337
BceAI	ACGGC	3 cut(s)	259, 391, 1053
BcgI	CGANNNNNNTGC	2 cut(s)	860, 894
BciT130I	CCWGG	3 cut(s)	518, 594, 1183
BciVI	GTATCC	4 cut(s)	1961, 1993, 2325, 2788
BclI	TGATCA	5 cut(s)	322, 529, 1042, 1786, 1849
BcoDI	GTCTC	2 cut(s)	651, 2523
BfaI	CTAG	8 cut(s)	290, 294, 300, 387, 1230, 1376, 2849, 3198
BfmI	CTRYAG	3 cut(s)	97, 1426, 2949
BfrI	CTTAAG	1 cut(s)	1589
BfuI	GTATCC	4 cut(s)	1961, 1993, 2325, 2788
BglII	AGATCT	1 cut(s)	666
BlpI	GCTNAGC	1 cut(s)	3074
BmcAI	AGTACT	1 cut(s)	2803
Bme1390I	CCNGG	3 cut(s)	518, 594, 1183
Bme18I	GGWCC	1 cut(s)	392
BmeT110I	CYCGRG	1 cut(s)	2031
BmgT120I	GGNCC	4 cut(s)	392, 892, 988, 1191
BmiI	GGNNCC	8 cut(s)	6, 846, 894, 1006, 1269, 1476, 2154, 2934
BmrFI	CCNGG	3 cut(s)	518, 594, 1183
BmrI	ACTGGG	1 cut(s)	1512
BmsI	GCATC	8 cut(s)	276, 955, 1630, 1668, 1970, 2185, 2355, 2647
BmtI	GCTAGC	1 cut(s)	293
BmuI	ACTGGG	1 cut(s)	1512
BoxI	GACNNNNGTC	1 cut(s)	1225
BpiI	GAAGAC	5 cut(s)	42, 856, 1064, 2127, 3014
BpmI	CTGGAG	2 cut(s)	158, 935
Bpu1102I	GCTNAGC	1 cut(s)	3074
Bpu14I	TTCGAA	1 cut(s)	1805
BpuEI	CTTGAG	1 cut(s)	1960
BsaHI	GRCGYC	1 cut(s)	272
BsaJI	CCNNGG	4 cut(s)	15, 593, 2265, 2922
BsaWI	WCCGGW	1 cut(s)	357
BsaXI	ACNNNNNCTCC	2 cut(s)	131, 161
Bsc4I	CCNNNNNNNGG	3 cut(s)	456, 593, 1188
Bse3DI	GCAATG	4 cut(s)	248, 680, 2205, 2970
BseAI	TCCGGA	1 cut(s)	357
BseBI	CCWGG	3 cut(s)	518, 594, 1183
BseDI	CCNNGG	4 cut(s)	15, 593, 2265, 2922
BseGI	GGATG	2 cut(s)	490, 1348
BseLI	CCNNNNNNNGG	3 cut(s)	456, 593, 1188
BseMI	GCAATG	4 cut(s)	248, 680, 2205, 2970
BseMII	CTCAG	5 cut(s)	387, 564, 2394, 3050, 3065
BsePI	GCGCGC	1 cut(s)	1820
BseRI	GAGGAG	1 cut(s)	1934
BseXI	GCAGC	8 cut(s)	32, 352, 415, 955, 1209, 1567, 1971, 2884
BseYI	CCCAGC	1 cut(s)	1271
BsgI	GTGCAG	2 cut(s)	1358, 2304
Bsh1236I	CGCG	1 cut(s)	1822
BshFI	GGCC	8 cut(s)	143, 383, 893, 989, 1193, 1793, 2270, 2838
BshNI	GGYRCC	2 cut(s)	1267, 2932
BsiHKAI	GWGCWC	4 cut(s)	1507, 2040, 2596, 2650
BsiHKCI	CYCGRG	1 cut(s)	2031
BsiSI	CCGG	1 cut(s)	358
BslFI	GGGAC	2 cut(s)	784, 3236
BslI	CCNNNNNNNGG	3 cut(s)	456, 593, 1188
BsmAI	GTCTC	2 cut(s)	651, 2523
BsmFI	GGGAC	2 cut(s)	784, 3236
BsmI	GAATGC	2 cut(s)	1798, 2714
BsnI	GGCC	8 cut(s)	143, 383, 893, 989, 1193, 1793, 2270, 2838
BsoBI	CYCGRG	1 cut(s)	2031
Bsp119I	TTCGAA	1 cut(s)	1805
Bsp1286I	GDGCHC	5 cut(s)	190, 1507, 2040, 2596, 2650
Bsp13I	TCCGGA	1 cut(s)	357
Bsp1407I	TGTACA	1 cut(s)	159
Bsp1720I	GCTNAGC	1 cut(s)	3074
Bsp19I	CCATGG	3 cut(s)	15, 2265, 2922
BspACI	CCGC	5 cut(s)	1514, 1643, 2281, 2719, 3157
BspANI	GGCC	8 cut(s)	143, 383, 893, 989, 1193, 1793, 2270, 2838
BspCNI	CTCAG	5 cut(s)	388, 565, 2395, 3051, 3066
BspEI	TCCGGA	1 cut(s)	357
BspFNI	CGCG	1 cut(s)	1822
BspHI	TCATGA	2 cut(s)	1045, 1846
BspLI	GGNNCC	8 cut(s)	6, 846, 894, 1006, 1269, 1476, 2154, 2934
BspMAI	CTGCAG	2 cut(s)	1430, 2953
BspOI	GCTAGC	1 cut(s)	293
BspT104I	TTCGAA	1 cut(s)	1805
BspT107I	GGYRCC	2 cut(s)	1267, 2932
BspTI	CTTAAG	1 cut(s)	1589
BsrDI	GCAATG	4 cut(s)	248, 680, 2205, 2970
BsrGI	TGTACA	1 cut(s)	159
BssECI	CCNNGG	4 cut(s)	15, 593, 2265, 2922
BssHII	GCGCGC	1 cut(s)	1820
BssNAI	GTATAC	1 cut(s)	1207
BssNI	GRCGYC	1 cut(s)	272
BssSI	CACGAG	1 cut(s)	2587
BssT1I	CCWWGG	3 cut(s)	15, 2265, 2922
Bst1107I	GTATAC	1 cut(s)	1207
Bst2BI	CACGAG	1 cut(s)	2587
Bst2UI	CCWGG	3 cut(s)	518, 594, 1183
Bst4CI	ACNGT	9 cut(s)	808, 1224, 1471, 1688, 1739, 2005, 2871, 3041, 3247
Bst6I	CTCTTC	1 cut(s)	2526
BstACI	GRCGYC	1 cut(s)	272
BstAFI	CTTAAG	1 cut(s)	1589
BstAUI	TGTACA	1 cut(s)	159
BstBI	TTCGAA	1 cut(s)	1805
BstDEI	CTNAG	6 cut(s)	396, 573, 1296, 2403, 3059, 3074
BstDSI	CCRYGG	3 cut(s)	15, 2265, 2922
BstENI	CCTNNNNNAGG	1 cut(s)	591
BstF5I	GGATG	2 cut(s)	490, 1348
BstFNI	CGCG	1 cut(s)	1822
BstHHI	GCGC	3 cut(s)	687, 1822, 1824
BstMAI	GTCTC	2 cut(s)	651, 2523
BstMWI	GCNNNNNNNGC	3 cut(s)	20, 1556, 2741
BstNI	CCWGG	3 cut(s)	518, 594, 1183
BstNSI	RCATGY	2 cut(s)	1513, 2329
BstPAI	GACNNNNGTC	1 cut(s)	1225
BstSCI	CCNGG	3 cut(s)	516, 592, 1181
BstSFI	CTRYAG	3 cut(s)	97, 1426, 2949
BstUI	CGCG	1 cut(s)	1822
BstV1I	GCAGC	8 cut(s)	32, 352, 415, 955, 1209, 1567, 1971, 2884
BstV2I	GAAGAC	5 cut(s)	42, 856, 1064, 2127, 3014
BstX2I	RGATCY	8 cut(s)	101, 666, 813, 844, 1346, 2152, 2248, 2822
BstXI	CCANNNNNNTGG	3 cut(s)	118, 825, 1709
BstYI	RGATCY	8 cut(s)	101, 666, 813, 844, 1346, 2152, 2248, 2822
BstZ17I	GTATAC	1 cut(s)	1207
BsuI	GTATCC	4 cut(s)	1961, 1993, 2325, 2788
BsuRI	GGCC	8 cut(s)	143, 383, 893, 989, 1193, 1793, 2270, 2838
BtgI	CCRYGG	3 cut(s)	15, 2265, 2922
BtgZI	GCGATG	1 cut(s)	131
BtsCI	GGATG	2 cut(s)	490, 1348
BtsI	GCAGTG	1 cut(s)	1207
CciI	TCATGA	2 cut(s)	1045, 1846
CfoI	GCGC	3 cut(s)	687, 1822, 1824
Cfr13I	GGNCC	4 cut(s)	392, 892, 988, 1191
CseI	GACGC	2 cut(s)	280, 2865
Csp6I	GTAC	7 cut(s)	160, 804, 1247, 1605, 1694, 2411, 2802
CspCI	CAANNNNNGTGG	2 cut(s)	2319, 2354
CviQI	GTAC	7 cut(s)	160, 804, 1247, 1605, 1694, 2411, 2802
DdeI	CTNAG	6 cut(s)	396, 573, 1296, 2403, 3059, 3074
DraI	TTTAAA	1 cut(s)	2140
DraIII	CACNNNGTG	1 cut(s)	2873
DrdI	GACNNNNNNGTC	1 cut(s)	1538
DseDI	GACNNNNNNGTC	1 cut(s)	1538
EaeI	YGGCCR	2 cut(s)	381, 2268
Eam1104I	CTCTTC	1 cut(s)	2526
EarI	CTCTTC	1 cut(s)	2526
Ecl136II	GAGCTC	2 cut(s)	1505, 2594
Eco130I	CCWWGG	3 cut(s)	15, 2265, 2922
Eco147I	AGGCCT	1 cut(s)	143
Eco24I	GRGCYC	3 cut(s)	190, 1507, 2596
Eco32I	GATATC	1 cut(s)	355
Eco47I	GGWCC	1 cut(s)	392
Eco53kI	GAGCTC	2 cut(s)	1505, 2594
Eco57I	CTGAAG	4 cut(s)	619, 1335, 1379, 3026
Eco88I	CYCGRG	1 cut(s)	2031
EcoICRI	GAGCTC	2 cut(s)	1505, 2594
EcoNI	CCTNNNNNAGG	1 cut(s)	591
EcoO109I	RGGNCCY	2 cut(s)	392, 892
EcoRII	CCWGG	3 cut(s)	516, 592, 1181
EcoRV	GATATC	1 cut(s)	355
EcoT14I	CCWWGG	3 cut(s)	15, 2265, 2922
EcoT22I	ATGCAT	3 cut(s)	1800, 2230, 2814
EcoT38I	GRGCYC	3 cut(s)	190, 1507, 2596
ErhI	CCWWGG	3 cut(s)	15, 2265, 2922
FalI	AAGNNNNNCTT	2 cut(s)	1539, 1571
FaqI	GGGAC	2 cut(s)	784, 3236
FbaI	TGATCA	5 cut(s)	322, 529, 1042, 1786, 1849
FblI	GTMKAC	1 cut(s)	1206
FokI	GGATG	2 cut(s)	497, 1355
FriOI	GRGCYC	3 cut(s)	190, 1507, 2596
FspBI	CTAG	8 cut(s)	290, 294, 300, 387, 1230, 1376, 2849, 3198
GlaI	GCGC	3 cut(s)	686, 1821, 1823
GsaI	CCCAGC	1 cut(s)	1275
GsuI	CTGGAG	2 cut(s)	158, 935
HaeIII	GGCC	8 cut(s)	143, 383, 893, 989, 1193, 1793, 2270, 2838
HapII	CCGG	1 cut(s)	358
HgaI	GACGC	2 cut(s)	280, 2865
HhaI	GCGC	3 cut(s)	687, 1822, 1824
Hin1I	GRCGYC	1 cut(s)	272
Hin6I	GCGC	3 cut(s)	685, 1820, 1822
HinP1I	GCGC	3 cut(s)	685, 1820, 1822
HincII	GTYRAC	1 cut(s)	2614
HindII	GTYRAC	1 cut(s)	2614
HpaII	CCGG	1 cut(s)	358
HphI	GGTGA	5 cut(s)	439, 1249, 1724, 1796, 3143
HpyAV	CCTTC	7 cut(s)	37, 612, 612, 858, 1118, 1436, 2557
HpyCH4III	ACNGT	9 cut(s)	808, 1224, 1471, 1688, 1739, 2005, 2871, 3041, 3247
HpyCH4IV	ACGT	3 cut(s)	1081, 2288, 2529
HpyF10VI	GCNNNNNNNGC	3 cut(s)	20, 1556, 2741
HpyF3I	CTNAG	6 cut(s)	396, 573, 1296, 2403, 3059, 3074
HpySE526I	ACGT	3 cut(s)	1081, 2288, 2529
Hsp92I	GRCGYC	1 cut(s)	272
HspAI	GCGC	3 cut(s)	685, 1820, 1822
Kpn2I	TCCGGA	1 cut(s)	357
Ksp22I	TGATCA	5 cut(s)	322, 529, 1042, 1786, 1849
LmnI	GCTCC	5 cut(s)	4, 360, 1954, 2035, 3201
Lsp1109I	GCAGC	8 cut(s)	32, 352, 415, 955, 1209, 1567, 1971, 2884
LweI	GCATC	8 cut(s)	276, 955, 1630, 1668, 1970, 2185, 2355, 2647
MaeI	CTAG	8 cut(s)	290, 294, 300, 387, 1230, 1376, 2849, 3198
MaeII	ACGT	3 cut(s)	1081, 2288, 2529
MfeI	CAATTG	3 cut(s)	777, 1667, 2097
MflI	RGATCY	8 cut(s)	101, 666, 813, 844, 1346, 2152, 2248, 2822
MhlI	GDGCHC	5 cut(s)	190, 1507, 2040, 2596, 2650
MlsI	TGGCCA	2 cut(s)	383, 2270
MluNI	TGGCCA	2 cut(s)	383, 2270
MlyI	GAGTC	6 cut(s)	167, 506, 1631, 2435, 3004, 3064
MmeI	TCCRAC	5 cut(s)	454, 1783, 1858, 1977, 2800
Mox20I	TGGCCA	2 cut(s)	383, 2270
Mph1103I	ATGCAT	3 cut(s)	1800, 2230, 2814
MroI	TCCGGA	1 cut(s)	357
MroXI	GAANNNNTTC	1 cut(s)	1392
MscI	TGGCCA	2 cut(s)	383, 2270
MslI	CAYNNNNRTG	4 cut(s)	116, 916, 2869, 2921
Msp20I	TGGCCA	2 cut(s)	383, 2270
MspA1I	CMGCKG	1 cut(s)	3157
MspCI	CTTAAG	1 cut(s)	1589
MspI	CCGG	1 cut(s)	358
MspR9I	CCNGG	3 cut(s)	518, 594, 1183
MunI	CAATTG	3 cut(s)	777, 1667, 2097
Mva1269I	GAATGC	2 cut(s)	1798, 2714
MvaI	CCWGG	3 cut(s)	518, 594, 1183
MvnI	CGCG	1 cut(s)	1822
MwoI	GCNNNNNNNGC	3 cut(s)	20, 1556, 2741
NcoI	CCATGG	3 cut(s)	15, 2265, 2922
NheI	GCTAGC	1 cut(s)	289
NlaIV	GGNNCC	8 cut(s)	6, 846, 894, 1006, 1269, 1476, 2154, 2934
NmuCI	GTSAC	6 cut(s)	316, 1133, 1237, 1529, 1623, 1931
NsiI	ATGCAT	3 cut(s)	1800, 2230, 2814
NspI	RCATGY	2 cut(s)	1513, 2329
NspV	TTCGAA	1 cut(s)	1805
OliI	CACNNNNGTG	1 cut(s)	916
PaeI	GCATGC	1 cut(s)	1513
PagI	TCATGA	2 cut(s)	1045, 1846
PauI	GCGCGC	1 cut(s)	1820
PceI	AGGCCT	1 cut(s)	143
PctI	GAATGC	2 cut(s)	1798, 2714
PdmI	GAANNNNTTC	1 cut(s)	1392
PfoI	TCCNGGA	1 cut(s)	1181
PleI	GAGTC	6 cut(s)	167, 505, 1630, 2435, 3004, 3063
PpsI	GAGTC	6 cut(s)	167, 505, 1630, 2435, 3004, 3063
PpuMI	RGGWCCY	1 cut(s)	392
PshAI	GACNNNNGTC	1 cut(s)	1225
PshBI	ATTAAT	2 cut(s)	1674, 2231
Psp124BI	GAGCTC	2 cut(s)	1507, 2596
Psp1406I	AACGTT	2 cut(s)	2288, 2529
Psp5II	RGGWCCY	1 cut(s)	392
Psp6I	CCWGG	3 cut(s)	516, 592, 1181
PspFI	CCCAGC	1 cut(s)	1271
PspGI	CCWGG	3 cut(s)	516, 592, 1181
PspN4I	GGNNCC	8 cut(s)	6, 846, 894, 1006, 1269, 1476, 2154, 2934
PspPI	GGNCC	4 cut(s)	392, 892, 988, 1191
PspPPI	RGGWCCY	1 cut(s)	392
PsrI	GAACNNNNNNTAC	4 cut(s)	215, 247, 1467, 1499
PstI	CTGCAG	2 cut(s)	1430, 2953
PsuI	RGATCY	8 cut(s)	101, 666, 813, 844, 1346, 2152, 2248, 2822
PteI	GCGCGC	1 cut(s)	1820
RsaI	GTAC	7 cut(s)	161, 805, 1248, 1606, 1695, 2412, 2803
RsaNI	GTAC	7 cut(s)	160, 804, 1247, 1605, 1694, 2411, 2802
RseI	CAYNNNNRTG	4 cut(s)	116, 916, 2869, 2921
SacI	GAGCTC	2 cut(s)	1507, 2596
Sau96I	GGNCC	4 cut(s)	392, 892, 988, 1191
ScaI	AGTACT	1 cut(s)	2803
SchI	GAGTC	6 cut(s)	167, 506, 1631, 2435, 3004, 3064
ScrFI	CCNGG	3 cut(s)	518, 594, 1183
SduI	GDGCHC	5 cut(s)	190, 1507, 2040, 2596, 2650
SfaNI	GCATC	8 cut(s)	276, 955, 1630, 1668, 1970, 2185, 2355, 2647
SfcI	CTRYAG	3 cut(s)	97, 1426, 2949
SfuI	TTCGAA	1 cut(s)	1805
SinI	GGWCC	1 cut(s)	392
SmiMI	CAYNNNNRTG	4 cut(s)	116, 916, 2869, 2921
SmlI	CTYRAG	2 cut(s)	1589, 1939
SmoI	CTYRAG	2 cut(s)	1589, 1939
SphI	GCATGC	1 cut(s)	1513
SseBI	AGGCCT	1 cut(s)	143
SsiI	CCGC	5 cut(s)	1514, 1643, 2281, 2719, 3157
SspI	AATATT	2 cut(s)	660, 2112
SspMI	CTAG	8 cut(s)	290, 294, 300, 387, 1230, 1376, 2849, 3198
SstI	GAGCTC	2 cut(s)	1507, 2596
StuI	AGGCCT	1 cut(s)	143
StyD4I	CCNGG	3 cut(s)	516, 592, 1181
StyI	CCWWGG	3 cut(s)	15, 2265, 2922
TaaI	ACNGT	9 cut(s)	808, 1224, 1471, 1688, 1739, 2005, 2871, 3041, 3247
TaiI	ACGT	3 cut(s)	1084, 2291, 2532
TaqI	TCGA	8 cut(s)	89, 616, 870, 1144, 1322, 1805, 2181, 3033
TatI	WGTACW	4 cut(s)	159, 1604, 2410, 2801
TauI	GCSGC	3 cut(s)	1516, 2283, 3160
TseFI	GTSAC	6 cut(s)	316, 1133, 1237, 1529, 1623, 1931
TseI	GCWGC	8 cut(s)	20, 340, 403, 968, 1197, 1580, 1984, 2897
Tsp45I	GTSAC	6 cut(s)	316, 1133, 1237, 1529, 1623, 1931
TspGWI	ACGGA	1 cut(s)	1511
Vha464I	CTTAAG	1 cut(s)	1589
VpaK11BI	GGWCC	1 cut(s)	392
VspI	ATTAAT	2 cut(s)	1674, 2231
XagI	CCTNNNNNAGG	1 cut(s)	591
XapI	RAATTY	4 cut(s)	797, 1286, 2009, 2393
XbaI	TCTAGA	2 cut(s)	1229, 2848
XceI	RCATGY	2 cut(s)	1513, 2329
XcmI	CCANNNNNNNNNTGG	1 cut(s)	115
XmiI	GTMKAC	1 cut(s)	1206
XmnI	GAANNNNTTC	1 cut(s)	1392
XspI	CTAG	8 cut(s)	290, 294, 300, 387, 1230, 1376, 2849, 3198
ZrmI	AGTACT	1 cut(s)	2803
Zsp2I	ATGCAT	3 cut(s)	1800, 2230, 2814

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.