Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr02

Orthogroup ID

OG0002358

Physical Location & Seq

Genomic Coordinates Forward (+)

21011269 .. 21026200

Gene Structure 14932 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD02G1207800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3039 bp

ATGGTTTGGGAAGACTTAGCATTTAGCGCACCATTGGAGACTCCTTCACAAGGCACCCAGAAATTCCATTTCCAAAGCCACCAAACGAATTGGGACCGTGAAGCATCGTTGGACTGCAATCGGAGATCGAATCGGCGGCAGCGGCTTACGGCAACCTGGGTCGCGAACCGCCGCGGTTCGGGGTTGGAAGGAGTTTTCGAAGCGATGGAGGGTTTAAGGCAACTGGAGGCTTTGTGTGAGAGGCTGTACAATTCACAGGACTCAGTCGAAAGGGCTCACGCCGAAAACACTCTCAAATGCTTTTCGGTGAACATCGAATACATTTCGCAGTGCCAGTACATTCTCGACAATGCCATGACTCCCTACGCGTTGATGCTGGCTAGTTCTAGCTTGTTGAAGCAAGTCACTGAGCAAAAACTTGCTCTGCAGCTTCGTCTCGACATCTGGAATTACCTTATTAACTATTTGGCTACTCGAGGACGAGAGTTGCAGCCGTTTGTGACTGCCTCTTTAATCCAACTCTTATGTCGACTCACCAAGTTTGGGTGGTTTGATGATGATCGATTCCGGGATGTGGTGAAAGAGTCAATGAACTTCTTGAATCAGGCAACATCTGATCACTATGCCATTGGTTTGAAGATATTGAACCAGCTCGTGTCTGAGATGAGTCAGGCACTGGAGTGCTTGGTGCGACTGGCTTCTGTTAGACGTTCTTTGTTTACAAGTGATCCTGCCCGTTCAAACTATCTGTCCCATTTAATCACAGGAACCAAAGAAATCCTACAAACTGGGCAAGGTCTTGCTGATCATGATAATTACCATGAATATTGTCGTCTTCTTGGACGATTCCGAATGAATTATCAGTTGTCTGAGCTTGTGACTGTGGAAGGCTATAGTGACTGGATACGTTTAGTAGCAGAATTCACTTTAAAGTCTTTGCATTCCTGGAAGTGGGCCAGCAGCAGTGTATACTACCTTTTAGGACTATGGTCTAGATTGGTGACATCTGTACCATACTTGAAGGGTGATGCACCCAGCATGCTCGATGAATTTGTTCCTAAGATTACTGAAGGTTTCATCACATCAAGATTTAACTCCGTGCAGGATGGATTGCTTGATGATCTTTCTGAGAACCCTTTAGACAACGTTGAACTTCTTCAAGATCAGTTGGATTGTTTTACACAAGTCTGTAGATTCCAGTATGAAAGCAGTAGCTTGTATATAATAAACATAGTGGAGCCTCTTTTGCAAGTCTACACGGAAAGAGCTCGAGTTCAGACCAGTGATAACAGTGACCTCTCTGTTATTGAAGCGAAACTTGCTTGGATTGTTCATATAGTTGCTGCAGTTCTCAAGATAAAACAAAGTACTGGGTGCAGTGCCGAGTCACAAGAAGTACTTGATGCAGAACTTTCAGCTCGCATCTTGCAGTTAATAAATGTCACTGACAGTGGGCTACACAGCCAGAGGTATGGTGAAACAAGCAAGCAAAGACTTGATCGTGCAATTCTTACCTTTTTTCAACATTTTCGGAAGTCTTATGTGGGTGACCAGGCCATGCATTCTTCGAGGCAGTTATATGCTCGCCTTTCTGAGCTTCTGGGACTTCATGATCATCTTTTGATGTTAAATGTCATTGTTGGCAAGATTGCTACAAACCTGAAATGTTATACGGAGAATGAGGAGGTCATTGGTCACACCCTGAGCTTGTTCTTGGAGCTGGCGTCTGGATACATGAGTGGCAAGCTACTCTTGAAGTTGGATACTGTCAAATTTATACTTGCCAATCATACTAGGGAGCATTTCCCTTTTCTGGAAGAGTATAGGTGTTCTCGCAGCAGAACAACTTTCTATTACATAATTGGCTGGTTAATATTCATGGAAGACAGCCCTGTCAAATTTAAATCTTCCATGGATCCACTTTTGCAAGTTTTCGCCAATCTGGAATCAACTCCTGATTCAATGTTTCGTACTGATGCTGTAAAGTATGGACTAATTGGGTTGATGAGAGACCTTAGAGGAATTGCCATGGCCACAAATAGTCGCAGAACTTATGGCTTTCTGTTTGATTGGTTGTATCCTGCACACATGCCCCTTCTTTTGAAAGGAATCTTGCACTGGTCCGATACACCAGAGGTGACCACCCCTTTGTTGAAATTCATGGCTGAGTTTGCATTCAACAAAGCCCAACGCTTGACTTTTGATTCATCTTCTCCTAATGGAATACTTCTTTTTCGAGAAGTCAGTAAATTGATTGTTGCGTATGGGTCAAGGATTTTGTCTCTTCCAAATGTTGCGGATATATATGGCTTCAAATACAAGGGAATTTGGATTTCTTTAACTATTCTTACAAGAGCTCTTGCTGGAAACTATGTCAACTTTGGGGTGTTTGAGCTATATGGTGATAGAGCGCTTGCTGATGCACTTGATATTGCACTGAAGATGACATTATCAATTCCTTTGGCTGATGTATTGGCATTCCGCAAGCTGACAAAGGCCTATTTTGCATTCTTGGAGGTTTTATTCAACAGCCATATAGTGTATATATTGAATCTGGATACCAGTACTTTTATGCATATAGTTGGGTCCCTTGAGTCTGGGATTAAAGGTTTCGATGCAGGCATTGCATCACAGTGTGCATCAGCTGTTGAAACTTTGGCTGCTTTCTACTTCAACAACATAACCATGGGTGAGGCACCCACATCACCTACTGCGGTCAATCTTGCTCGTCACATTTCAGACTGCCCCAACTTGTTTCCAGAAGTACTGAAGACGCTGTTTGAGATTGTTTTATTCGAGGAAAGTAACAACCAGTGGAATTTTAGCAGACCAATGCTGAGCTTGATACTTATTAATGAGCAGATATTCTCCGATTTGAAAGCTCATATCTTAGCTTCACAGCAAGCGGATCAACATCAACGGCTTTCCCAGTGTTTTGACAAGCTTATGGTGGATGTTACTAGAAGCTTGGATACAAAGAACAGGGACAAGTTTGCCCAAAACTTGACGGTATTCAGGCGTGATTTCCGGTTGAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005049 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005643 GO:0005737 GO:0006611 GO:0006810 GO:0006886 GO:0006913 GO:0008104 GO:0008150 GO:0008536 GO:0012505 GO:0015031 GO:0015833 GO:0017016 GO:0019899 GO:0031267 GO:0031967 GO:0031975 GO:0032991 GO:0033036 GO:0034613 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045184 GO:0046907 GO:0051020 GO:0051168 GO:0051169 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0070727 GO:0071702 GO:0071705 GO:0140104 GO:0140142

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

IBN_N

Protein Analysis

1013

Amino Acids

115.54

Weight (kDa)

6.28

Isoelectric Point (pI)

40.18

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_XPO7	PF25795	371 - 612	3.6e-96	Exportin-7-like, TPR repeats

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002358)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G06120 AT5G06120 AT5G06120 AT5G06120 AT5G06120 AT5G06120 AT5G06120 AT5G06120 AT5G06120 AT5G06120
fragaria_vesca	FvH4_7g04530 FvH4_7g04530 FvH4_7g04530 FvH4_7g04530 FvH4_7g04530 FvH4_7g04530 FvH4_7g04530 FvH4_7g04530 FvH4_7g04530
malus_domestica	MD02G1207800.v1.1 MD07G1118000.v1.1
prunus_persica	Prupe.2G050900_v2.0.a1 Prupe.2G050900_v2.0.a1 Prupe.2G050900_v2.0.a1 Prupe.2G050900_v2.0.a1 Prupe.2G051400_v2.0.a1
pyrus_communis	pycom02g17010 pycom07g10620
rosa_chinensis	RchiOBHm_Chr1g0329811
rosa_laevigata	RLG00000029862
rosa_multiflora	Rmu_co8519431.1_g000001 Rmu_sc0003459.1_g000016
rosa_roxburghii	Rroxscaffold_4G00320670
rosa_rugosa	Rorug01G0083100 Rorug01G0083200 Rorug01G0083300 Rorug01G0083400
rosa_samantha	Rh1AG101400 Rh1BG080600 Rh1CG097100 Rh1DG104700
rosa_wichuraiana	Rw1G008010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1892
AccB1I	GGYRCC	2 cut(s)	53, 2695
AccI	GTMKAC	3 cut(s)	529, 969, 1254
AccII	CGCG	3 cut(s)	164, 174, 368
AciI	CCGC	9 cut(s)	136, 142, 169, 172, 174, 2297, 2482, 2714, 2906
AclI	AACGTT	1 cut(s)	1146
AclWI	GGATC	4 cut(s)	722, 1910, 1923, 2916
AcoI	YGGCCR	1 cut(s)	2031
AcsI	RAATTY	8 cut(s)	62, 920, 1049, 1772, 1898, 2156, 2325, 2818
AcuI	CTGAAG	3 cut(s)	1089, 2459, 2789
AcyI	GRCGYC	1 cut(s)	1724
AdeI	CACNNNGTG	1 cut(s)	2636
AfaI	GTAC	8 cut(s)	248, 338, 1011, 1369, 1398, 1972, 2566, 2766
AfeI	AGCGCT	1 cut(s)	2412
AfiI	CCNNNNNNNGG	6 cut(s)	50, 178, 543, 574, 951, 1813
AflIII	ACRYGT	1 cut(s)	366
AjnI	CCWGG	3 cut(s)	155, 944, 1551
AleI	CACNNNNGTG	1 cut(s)	679
Alw21I	GWGCWC	2 cut(s)	1270, 2359
Alw26I	GTCTC	4 cut(s)	32, 440, 2004, 2286
AlwI	GGATC	4 cut(s)	722, 1910, 1923, 2916
AlwNI	CAGNNNCTG	1 cut(s)	676
Ama87I	CYCGRG	2 cut(s)	474, 1269
Aor51HI	AGCGCT	1 cut(s)	2412
AoxI	GGCC	4 cut(s)	954, 1554, 2031, 2496
ApeKI	GCWGC	7 cut(s)	139, 427, 490, 960, 1343, 1836, 2660
ApoI	RAATTY	8 cut(s)	62, 920, 1049, 1772, 1898, 2156, 2325, 2818
ArsI	GACNNNNNNTTYG	4 cut(s)	734, 766, 2131, 2163
AseI	ATTAAT	1 cut(s)	2853
Asp700I	GAANNNNTTC	2 cut(s)	1053, 1155
AspLEI	GCGC	2 cut(s)	29, 2413
AspS9I	GGNCC	4 cut(s)	94, 954, 2121, 2586
AsuC2I	CCSGG	1 cut(s)	569
AsuII	TTCGAA	1 cut(s)	198
AvaI	CYCGRG	2 cut(s)	474, 1269
AvaII	GGWCC	3 cut(s)	94, 2121, 2586
BaeI	ACNNNNGTAYC	4 cut(s)	993, 1026, 1723, 1756
BalI	TGGCCA	1 cut(s)	2033
BamHI	GGATCC	1 cut(s)	1915
BanI	GGYRCC	2 cut(s)	53, 2695
BanII	GRGCYC	3 cut(s)	277, 1270, 2359
BarI	GAAGNNNNNNTAC	2 cut(s)	2956, 2988
BauI	CACGAG	1 cut(s)	653
BbsI	GAAGAC	4 cut(s)	18, 827, 1890, 2777
Bbv12I	GWGCWC	2 cut(s)	1270, 2359
BbvI	GCAGC	7 cut(s)	151, 439, 502, 972, 1330, 1848, 2647
BccI	CCATC	2 cut(s)	199, 1100
BceAI	ACGGC	3 cut(s)	165, 478, 2936
BciT130I	CCWGG	3 cut(s)	157, 946, 1553
BciVI	GTATCC	6 cut(s)	897, 1724, 1756, 2088, 2551, 2965
BclI	TGATCA	3 cut(s)	616, 805, 1612
BcnI	CCSGG	1 cut(s)	569
BcoDI	GTCTC	4 cut(s)	32, 440, 2004, 2286
BfaI	CTAG	5 cut(s)	381, 387, 993, 1794, 2961
BfmI	CTRYAG	4 cut(s)	425, 892, 1189, 1344
BfoI	RGCGCY	1 cut(s)	2414
BfuI	GTATCC	6 cut(s)	897, 1724, 1756, 2088, 2551, 2965
BlpI	GCTNAGC	1 cut(s)	2837
BmcAI	AGTACT	4 cut(s)	1369, 1398, 2566, 2766
Bme1390I	CCNGG	4 cut(s)	157, 569, 946, 1553
Bme18I	GGWCC	3 cut(s)	94, 2121, 2586
BmeT110I	CYCGRG	2 cut(s)	474, 1269
BmgT120I	GGNCC	4 cut(s)	94, 954, 2121, 2586
BmiI	GGNNCC	8 cut(s)	55, 95, 769, 1239, 1917, 2587, 2588, 2697
BmrFI	CCNGG	4 cut(s)	157, 569, 946, 1553
BmrI	ACTGGG	3 cut(s)	798, 1380, 2923
BmuI	ACTGGG	3 cut(s)	798, 1380, 2923
BoxI	GACNNNNGTC	1 cut(s)	988
BpiI	GAAGAC	4 cut(s)	18, 827, 1890, 2777
BpmI	CTGGAG	2 cut(s)	245, 698
Bpu10I	CCTNAGC	1 cut(s)	1703
Bpu1102I	GCTNAGC	1 cut(s)	2837
Bpu14I	TTCGAA	1 cut(s)	198
BpuEI	CTTGAG	2 cut(s)	1337, 2612
BpuMI	CCSGG	1 cut(s)	569
Bsa29I	ATCGAT	1 cut(s)	562
BsaBI	GATNNNNATC	2 cut(s)	558, 2913
BsaHI	GRCGYC	1 cut(s)	1724
BsaI	GGTCTC	1 cut(s)	2004
BsaJI	CCNNGG	5 cut(s)	156, 172, 1911, 2028, 2685
BsaWI	WCCGGW	1 cut(s)	3027
BsaXI	ACNNNNNCTCC	4 cut(s)	218, 248, 1709, 1739
Bsc4I	CCNNNNNNNGG	6 cut(s)	50, 178, 543, 574, 951, 1813
Bse3DI	GCAATG	1 cut(s)	2622
Bse8I	GATNNNNATC	2 cut(s)	558, 2913
BseBI	CCWGG	3 cut(s)	157, 946, 1553
BseCI	ATCGAT	1 cut(s)	562
BseDI	CCNNGG	5 cut(s)	156, 172, 1911, 2028, 2685
BseGI	GGATG	3 cut(s)	577, 1111, 2959
BseJI	GATNNNNATC	2 cut(s)	558, 2913
BseLI	CCNNNNNNNGG	6 cut(s)	50, 178, 543, 574, 951, 1813
BseMI	GCAATG	1 cut(s)	2622
BseMII	CTCAG	9 cut(s)	276, 399, 651, 861, 1119, 1584, 1694, 2157, 2828
BseRI	GAGGAG	1 cut(s)	1697
BseXI	GCAGC	7 cut(s)	151, 439, 502, 972, 1330, 1848, 2647
BseYI	CCCAGC	1 cut(s)	1034
BsgI	GTGCAG	3 cut(s)	1121, 1396, 2067
Bsh1236I	CGCG	3 cut(s)	164, 174, 368
BshFI	GGCC	4 cut(s)	956, 1556, 2033, 2498
BshNI	GGYRCC	2 cut(s)	53, 2695
BshVI	ATCGAT	1 cut(s)	562
BsiHKAI	GWGCWC	2 cut(s)	1270, 2359
BsiHKCI	CYCGRG	2 cut(s)	474, 1269
BsiSI	CCGG	2 cut(s)	568, 3028
BslFI	GGGAC	5 cut(s)	107, 736, 1617, 2572, 2999
BslI	CCNNNNNNNGG	6 cut(s)	50, 178, 543, 574, 951, 1813
BsmAI	GTCTC	4 cut(s)	32, 440, 2004, 2286
BsmBI	CGTCTC	1 cut(s)	440
BsmFI	GGGAC	5 cut(s)	107, 736, 1617, 2572, 2999
BsmI	GAATGC	5 cut(s)	940, 1561, 2174, 2477, 2507
BsnI	GGCC	4 cut(s)	956, 1556, 2033, 2498
Bso31I	GGTCTC	1 cut(s)	2004
BsoBI	CYCGRG	2 cut(s)	474, 1269
Bsp119I	TTCGAA	1 cut(s)	198
Bsp1286I	GDGCHC	3 cut(s)	277, 1270, 2359
Bsp1407I	TGTACA	1 cut(s)	246
Bsp1720I	GCTNAGC	1 cut(s)	2837
Bsp19I	CCATGG	3 cut(s)	1911, 2028, 2685
Bsp68I	TCGCGA	1 cut(s)	164
BspACI	CCGC	9 cut(s)	136, 142, 169, 172, 174, 2297, 2482, 2714, 2906
BspANI	GGCC	4 cut(s)	956, 1556, 2033, 2498
BspCNI	CTCAG	9 cut(s)	275, 400, 652, 862, 1120, 1585, 1695, 2158, 2829
BspDI	ATCGAT	1 cut(s)	562
BspFNI	CGCG	3 cut(s)	164, 174, 368
BspHI	TCATGA	2 cut(s)	808, 1609
BspLI	GGNNCC	8 cut(s)	55, 95, 769, 1239, 1917, 2587, 2588, 2697
BspMAI	CTGCAG	2 cut(s)	429, 1348
BspPI	GGATC	4 cut(s)	722, 1910, 1923, 2916
BspT104I	TTCGAA	1 cut(s)	198
BspT107I	GGYRCC	2 cut(s)	53, 2695
BspTNI	GGTCTC	1 cut(s)	2004
BsrDI	GCAATG	1 cut(s)	2622
BsrGI	TGTACA	1 cut(s)	246
BssECI	CCNNGG	5 cut(s)	156, 172, 1911, 2028, 2685
BssNAI	GTATAC	1 cut(s)	970
BssNI	GRCGYC	1 cut(s)	1724
BssSI	CACGAG	1 cut(s)	653
BssT1I	CCWWGG	3 cut(s)	1911, 2028, 2685
Bst1107I	GTATAC	1 cut(s)	970
Bst2BI	CACGAG	1 cut(s)	653
Bst2UI	CCWGG	3 cut(s)	157, 946, 1553
Bst4CI	ACNGT	7 cut(s)	98, 883, 1292, 1451, 1768, 2634, 3010
Bst6I	CTCTTC	2 cut(s)	1812, 2289
BstACI	GRCGYC	1 cut(s)	1724
BstAPI	GCANNNNNTGC	1 cut(s)	2624
BstAUI	TGTACA	1 cut(s)	246
BstBI	TTCGAA	1 cut(s)	198
BstDSI	CCRYGG	4 cut(s)	172, 1911, 2028, 2685
BstEII	GGTNACC	2 cut(s)	1547, 2137
BstENI	CCTNNNNNAGG	1 cut(s)	48
BstF5I	GGATG	3 cut(s)	577, 1111, 2959
BstFNI	CGCG	3 cut(s)	164, 174, 368
BstH2I	RGCGCY	1 cut(s)	2414
BstHHI	GCGC	2 cut(s)	29, 2413
BstMAI	GTCTC	4 cut(s)	32, 440, 2004, 2286
BstMWI	GCNNNNNNNGC	7 cut(s)	26, 142, 1246, 1319, 2171, 2504, 2624
BstNI	CCWGG	3 cut(s)	157, 946, 1553
BstNSI	RCATGY	2 cut(s)	1042, 2092
BstPAI	GACNNNNGTC	1 cut(s)	988
BstPI	GGTNACC	2 cut(s)	1547, 2137
BstSCI	CCNGG	4 cut(s)	155, 567, 944, 1551
BstSFI	CTRYAG	4 cut(s)	425, 892, 1189, 1344
BstUI	CGCG	3 cut(s)	164, 174, 368
BstV1I	GCAGC	7 cut(s)	151, 439, 502, 972, 1330, 1848, 2647
BstV2I	GAAGAC	4 cut(s)	18, 827, 1890, 2777
BstX2I	RGATCY	1 cut(s)	1915
BstXI	CCANNNNNNTGG	1 cut(s)	1472
BstYI	RGATCY	1 cut(s)	1915
BstZ17I	GTATAC	1 cut(s)	970
Bsu15I	ATCGAT	1 cut(s)	562
BsuI	GTATCC	6 cut(s)	897, 1724, 1756, 2088, 2551, 2965
BsuRI	GGCC	4 cut(s)	956, 1556, 2033, 2498
BsuTUI	ATCGAT	1 cut(s)	562
BtgI	CCRYGG	4 cut(s)	172, 1911, 2028, 2685
BtgZI	GCGATG	1 cut(s)	218
BtsCI	GGATG	3 cut(s)	577, 1111, 2959
BtsI	GCAGTG	3 cut(s)	335, 970, 1384
BtuMI	TCGCGA	1 cut(s)	164
CaiI	CAGNNNCTG	1 cut(s)	676
CciI	TCATGA	2 cut(s)	808, 1609
CfoI	GCGC	2 cut(s)	29, 2413
Cfr13I	GGNCC	4 cut(s)	94, 954, 2121, 2586
Cfr42I	CCGCGG	1 cut(s)	175
ClaI	ATCGAT	1 cut(s)	562
CseI	GACGC	2 cut(s)	1713, 2782
Csp6I	GTAC	8 cut(s)	247, 337, 1010, 1368, 1397, 1971, 2565, 2765
CviQI	GTAC	8 cut(s)	247, 337, 1010, 1368, 1397, 1971, 2565, 2765
DraI	TTTAAA	2 cut(s)	930, 1903
DraIII	CACNNNGTG	1 cut(s)	2636
DrdI	GACNNNNNNGTC	1 cut(s)	1892
DseDI	GACNNNNNNGTC	1 cut(s)	1892
EaeI	YGGCCR	1 cut(s)	2031
Eam1104I	CTCTTC	2 cut(s)	1812, 2289
EarI	CTCTTC	2 cut(s)	1812, 2289
Ecl136II	GAGCTC	2 cut(s)	1268, 2357
Eco130I	CCWWGG	3 cut(s)	1911, 2028, 2685
Eco147I	AGGCCT	1 cut(s)	2498
Eco24I	GRGCYC	3 cut(s)	277, 1270, 2359
Eco31I	GGTCTC	1 cut(s)	2004
Eco47I	GGWCC	3 cut(s)	94, 2121, 2586
Eco47III	AGCGCT	1 cut(s)	2412
Eco53kI	GAGCTC	2 cut(s)	1268, 2357
Eco57I	CTGAAG	3 cut(s)	1089, 2459, 2789
Eco88I	CYCGRG	2 cut(s)	474, 1269
Eco91I	GGTNACC	2 cut(s)	1547, 2137
EcoICRI	GAGCTC	2 cut(s)	1268, 2357
EcoNI	CCTNNNNNAGG	1 cut(s)	48
EcoO109I	RGGNCCY	1 cut(s)	2586
EcoO65I	GGTNACC	2 cut(s)	1547, 2137
EcoRI	GAATTC	1 cut(s)	920
EcoRII	CCWGG	3 cut(s)	155, 944, 1551
EcoT14I	CCWWGG	3 cut(s)	1911, 2028, 2685
EcoT22I	ATGCAT	2 cut(s)	1563, 2577
EcoT38I	GRGCYC	3 cut(s)	277, 1270, 2359
ErhI	CCWWGG	3 cut(s)	1911, 2028, 2685
Esp3I	CGTCTC	1 cut(s)	440
FalI	AAGNNNNNCTT	6 cut(s)	1302, 1334, 1383, 1415, 1736, 1768
FaqI	GGGAC	5 cut(s)	107, 736, 1617, 2572, 2999
FbaI	TGATCA	3 cut(s)	616, 805, 1612
FblI	GTMKAC	3 cut(s)	529, 969, 1254
FokI	GGATG	3 cut(s)	584, 1118, 2966
FriOI	GRGCYC	3 cut(s)	277, 1270, 2359
FspBI	CTAG	5 cut(s)	381, 387, 993, 1794, 2961
GlaI	GCGC	2 cut(s)	28, 2412
GsaI	CCCAGC	1 cut(s)	1038
GsuI	CTGGAG	2 cut(s)	245, 698
HaeII	RGCGCY	1 cut(s)	2414
HaeIII	GGCC	4 cut(s)	956, 1556, 2033, 2498
HapII	CCGG	2 cut(s)	568, 3028
HgaI	GACGC	2 cut(s)	1713, 2782
HhaI	GCGC	2 cut(s)	29, 2413
Hin1I	GRCGYC	1 cut(s)	1724
Hin6I	GCGC	2 cut(s)	27, 2411
HinP1I	GCGC	2 cut(s)	27, 2411
HincII	GTYRAC	2 cut(s)	530, 2377
HindII	GTYRAC	2 cut(s)	530, 2377
HindIII	AAGCTT	2 cut(s)	2942, 2965
HpaII	CCGG	2 cut(s)	568, 3028
Hpy166II	GTNNAC	6 cut(s)	310, 530, 720, 970, 1255, 2377
Hpy8I	GTNNAC	6 cut(s)	310, 530, 720, 970, 1255, 2377
HpyAV	CCTTC	6 cut(s)	54, 182, 881, 1015, 1064, 2105
HpyCH4III	ACNGT	7 cut(s)	98, 883, 1292, 1451, 1768, 2634, 3010
HpyCH4IV	ACGT	3 cut(s)	709, 907, 1146
HpyF10VI	GCNNNNNNNGC	7 cut(s)	26, 142, 1246, 1319, 2171, 2504, 2624
HpySE526I	ACGT	3 cut(s)	709, 907, 1146
Hsp92I	GRCGYC	1 cut(s)	1724
HspAI	GCGC	2 cut(s)	27, 2411
KflI	GGGWCCC	1 cut(s)	2586
Ksp22I	TGATCA	3 cut(s)	616, 805, 1612
KspI	CCGCGG	1 cut(s)	175
LmnI	GCTCC	3 cut(s)	1237, 1717, 1798
Lsp1109I	GCAGC	7 cut(s)	151, 439, 502, 972, 1330, 1848, 2647
MaeI	CTAG	5 cut(s)	381, 387, 993, 1794, 2961
MaeII	ACGT	3 cut(s)	709, 907, 1146
MflI	RGATCY	1 cut(s)	1915
MhlI	GDGCHC	3 cut(s)	277, 1270, 2359
MlsI	TGGCCA	1 cut(s)	2033
MluI	ACGCGT	1 cut(s)	366
MluNI	TGGCCA	1 cut(s)	2033
MlyI	GAGTC	8 cut(s)	34, 254, 352, 525, 593, 676, 1394, 2603
MmeI	TCCRAC	5 cut(s)	90, 165, 541, 1149, 1740
Mox20I	TGGCCA	1 cut(s)	2033
Mph1103I	ATGCAT	2 cut(s)	1563, 2577
MroXI	GAANNNNTTC	2 cut(s)	1053, 1155
MscI	TGGCCA	1 cut(s)	2033
MslI	CAYNNNNRTG	3 cut(s)	679, 2632, 2684
Msp20I	TGGCCA	1 cut(s)	2033
MspA1I	CMGCKG	3 cut(s)	142, 174, 2645
MspI	CCGG	2 cut(s)	568, 3028
MspR9I	CCNGG	4 cut(s)	157, 569, 946, 1553
Mva1269I	GAATGC	5 cut(s)	940, 1561, 2174, 2477, 2507
MvaI	CCWGG	3 cut(s)	157, 946, 1553
MvnI	CGCG	3 cut(s)	164, 174, 368
MwoI	GCNNNNNNNGC	7 cut(s)	26, 142, 1246, 1319, 2171, 2504, 2624
NciI	CCSGG	1 cut(s)	569
NcoI	CCATGG	3 cut(s)	1911, 2028, 2685
NlaIV	GGNNCC	8 cut(s)	55, 95, 769, 1239, 1917, 2587, 2588, 2697
NmeAIII	GCCGAG	1 cut(s)	1408
NruI	TCGCGA	1 cut(s)	164
NsiI	ATGCAT	2 cut(s)	1563, 2577
NspI	RCATGY	2 cut(s)	1042, 2092
NspV	TTCGAA	1 cut(s)	198
OliI	CACNNNNGTG	1 cut(s)	679
PaeI	GCATGC	1 cut(s)	1042
PaeR7I	CTCGAG	2 cut(s)	474, 1269
PagI	TCATGA	2 cut(s)	808, 1609
PceI	AGGCCT	1 cut(s)	2498
PctI	GAATGC	5 cut(s)	940, 1561, 2174, 2477, 2507
PdmI	GAANNNNTTC	2 cut(s)	1053, 1155
PflFI	GACNNNGTC	1 cut(s)	263
PfoI	TCCNGGA	2 cut(s)	567, 944
PleI	GAGTC	8 cut(s)	34, 254, 352, 525, 592, 675, 1393, 2602
PpsI	GAGTC	8 cut(s)	34, 254, 352, 525, 592, 675, 1393, 2602
PpuMI	RGGWCCY	1 cut(s)	2586
PshAI	GACNNNNGTC	1 cut(s)	988
PshBI	ATTAAT	1 cut(s)	2853
Psp124BI	GAGCTC	2 cut(s)	1270, 2359
Psp1406I	AACGTT	1 cut(s)	1146
Psp5II	RGGWCCY	1 cut(s)	2586
Psp6I	CCWGG	3 cut(s)	155, 944, 1551
PspEI	GGTNACC	2 cut(s)	1547, 2137
PspFI	CCCAGC	1 cut(s)	1034
PspGI	CCWGG	3 cut(s)	155, 944, 1551
PspN4I	GGNNCC	8 cut(s)	55, 95, 769, 1239, 1917, 2587, 2588, 2697
PspPI	GGNCC	4 cut(s)	94, 954, 2121, 2586
PspPPI	RGGWCCY	1 cut(s)	2586
PspXI	VCTCGAGB	2 cut(s)	474, 1269
PsrI	GAACNNNNNNTAC	2 cut(s)	302, 334
PstI	CTGCAG	2 cut(s)	429, 1348
PstNI	CAGNNNCTG	1 cut(s)	676
PsuI	RGATCY	1 cut(s)	1915
PsyI	GACNNNGTC	1 cut(s)	263
PvuII	CAGCTG	1 cut(s)	2645
RruI	TCGCGA	1 cut(s)	164
RsaI	GTAC	8 cut(s)	248, 338, 1011, 1369, 1398, 1972, 2566, 2766
RsaNI	GTAC	8 cut(s)	247, 337, 1010, 1368, 1397, 1971, 2565, 2765
RseI	CAYNNNNRTG	3 cut(s)	679, 2632, 2684
SacI	GAGCTC	2 cut(s)	1270, 2359
SacII	CCGCGG	1 cut(s)	175
SalI	GTCGAC	1 cut(s)	528
Sau96I	GGNCC	4 cut(s)	94, 954, 2121, 2586
ScaI	AGTACT	4 cut(s)	1369, 1398, 2566, 2766
SchI	GAGTC	8 cut(s)	34, 254, 352, 525, 593, 676, 1394, 2603
ScrFI	CCNGG	4 cut(s)	157, 569, 946, 1553
SduI	GDGCHC	3 cut(s)	277, 1270, 2359
SfcI	CTRYAG	4 cut(s)	425, 892, 1189, 1344
Sfr274I	CTCGAG	2 cut(s)	474, 1269
Sfr303I	CCGCGG	1 cut(s)	175
SfuI	TTCGAA	1 cut(s)	198
SgrBI	CCGCGG	1 cut(s)	175
SinI	GGWCC	3 cut(s)	94, 2121, 2586
SlaI	CTCGAG	2 cut(s)	474, 1269
SmiI	ATTTAAAT	1 cut(s)	1903
SmiMI	CAYNNNNRTG	3 cut(s)	679, 2632, 2684
SmlI	CTYRAG	4 cut(s)	474, 1269, 1352, 2591
SmoI	CTYRAG	4 cut(s)	474, 1269, 1352, 2591
SphI	GCATGC	1 cut(s)	1042
SseBI	AGGCCT	1 cut(s)	2498
SsiI	CCGC	9 cut(s)	136, 142, 169, 172, 174, 2297, 2482, 2714, 2906
SspI	AATATT	2 cut(s)	827, 1875
SspMI	CTAG	5 cut(s)	381, 387, 993, 1794, 2961
SstI	GAGCTC	2 cut(s)	1270, 2359
StuI	AGGCCT	1 cut(s)	2498
StyD4I	CCNGG	4 cut(s)	155, 567, 944, 1551
StyI	CCWWGG	3 cut(s)	1911, 2028, 2685
SwaI	ATTTAAAT	1 cut(s)	1903
TaaI	ACNGT	7 cut(s)	98, 883, 1292, 1451, 1768, 2634, 3010
TaiI	ACGT	3 cut(s)	712, 910, 1149
TatI	WGTACW	6 cut(s)	246, 336, 1367, 1396, 2564, 2764
TauI	GCSGC	3 cut(s)	139, 145, 174
TseI	GCWGC	7 cut(s)	139, 427, 490, 960, 1343, 1836, 2660
TspGWI	ACGGA	3 cut(s)	1087, 1274, 1688
Tth111I	GACNNNGTC	1 cut(s)	263
VpaK11BI	GGWCC	3 cut(s)	94, 2121, 2586
VspI	ATTAAT	1 cut(s)	2853
XagI	CCTNNNNNAGG	1 cut(s)	48
XapI	RAATTY	8 cut(s)	62, 920, 1049, 1772, 1898, 2156, 2325, 2818
XbaI	TCTAGA	1 cut(s)	992
XceI	RCATGY	2 cut(s)	1042, 2092
XhoI	CTCGAG	2 cut(s)	474, 1269
XmiI	GTMKAC	3 cut(s)	529, 969, 1254
XmnI	GAANNNNTTC	2 cut(s)	1053, 1155
XspI	CTAG	5 cut(s)	381, 387, 993, 1794, 2961
ZrmI	AGTACT	4 cut(s)	1369, 1398, 2566, 2766
Zsp2I	ATGCAT	2 cut(s)	1563, 2577

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.