Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0002358

Physical Location & Seq

Genomic Coordinates Forward (+)

13577090 .. 13581359

Gene Structure 4270 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0083200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1818 bp

ATGCAAGGCGCTCTCATTAGGTCTACTTCCACCATCCTACTCCGGCCACCGCCTCAGCCGCGGCGGAGCAGGACCACTCCTCATGTATTCTCCATCCGAGCCTCCGCCCAATCCGCCCCCATTGCCGTCGCCGTCGACGAGAAGAAGCTCAACAAGTACAGCTCCCAAATCACGGATCCCAAGTCCCAGGGAGGCTCTCAGGCCATTCTCTACGGAGTGGGGCTCTCCGACGCCGACATGACCAAGCCCCAGATCGGCATATCCTCCGTCTGGTACGAGGGCAACACTTGCAACATGCACCTGCTGGGCCTCTCGGAGGCCGTGAAGGAAGGCGTCCAAGAGGCCGGAATGGTCGGCTTCCGGTTCAACACCGTCGGCGTCAGTGATGCTATCTCTATGGGGACTAGGGGCATGTGCTACAGCTTGCAGTCTAGGGATTTGATTGCTGATAGCATTGAGACTGTCATGGGGGCTCAGTGGTATGATGGCAATATCTCCATTCCTGGCTGTGACAAAAATATGCCAGGTACAATTATGGCAATGGGCCGGCTTAACCGACCAAGTATCATGATTTATGGGGGAACTATCAAGCCTGGGCATTTCCAAGGCAATACGTATGACATAGTATCCGCCTTTCAGATCTATGGAGAGTATGTAAGTGGATCCATAAGTGATGAGCACAGAAAGAATGTTGTTCGTAACTCCTGTCCGGGCGCTGGGGCTTGTGGTGGAATGTATACGGCTAATACAATGGCTTGTGCCATTGAAGCTTTAGGAATGTCTATACCTTACAGCTCTTCTACACCGGCTGAAGATCCATTAAAGTTGGATGAGTGCCGCTTGGCTGGGAAATATCTGCTGGAATTATTAAAAATGGATTTAAAACCGCGAGATATTATTACTCCAAAGTCGCTACATAATGCTATGGTTACTGTCATGGCATTGGGTGGATCTACCAATGCTGTGTTACACTTAATTGCTATTGCCAGGTCTGTGGGCCTGGACTTAACTCTAGATGATTTTCAGAGAGTTAGCGATAAGGTTCCATTTCTTGCAGATCTTAAGCCTAGTGGCAAGTATGTCATGGAGGATGTACACAAGATTGGAGGAACACCAGCTGTGCTTCGCTACCTATTGGAGAATGGACTTTTACATGGGGATTGTGTAACTGTAACCGGGAGGACACTGGCTGAGAATGCCAAAAGCTTCCTTCCTTTGTCTACCGGGCAGGATATAATCAGACCCTTGGAAAATCCTATCAAGAAAACAGGTCACCTCCAAGTATTATATGGAAATCTTGCACCAAAGGGTTCTGTAGCAAAGATTACAGGGAAAGAAGGGCTATACTTCTCTGGTCCAGCACTTGTCTTTGAAGGGGAGGAGGCTATGATTGCAGCTATCACAGAGAATCCAATGAATTTCAAGGGAAAAGTAGTTGTTATTAGAGGAGAGGGTCCGAAGGGAGGACCAGGCATGCCTGAAATGTTAACACCTACCAGTGCAATAATGGGTGCAGGTCTTGGGAAGGAAACAGCATTGTTGACCGATGGTAGGTTTTCAGGAGGTTCACATGGATTTGTTGTTGGCCACATATGTCCTGAAGCACAGGAAGGTGGTCCTATTGGATTAATTGAAAACGGGGACATCATCACCGTTGATGTTGAAAAGAGAAGATTGGATGTTCAGTTAACAGATCAAGAGATGGACACTCGAAGAAAGAACTGGGTTGCACCTCCATACAAGGCTAACCGTGGAATTTTGTACAAGTATATCAAGAATGTACAATCAGCTTCAAATGGATGCGTGACGGATGAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005049 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005643 GO:0005737 GO:0006611 GO:0006810 GO:0006886 GO:0006913 GO:0008104 GO:0008150 GO:0008536 GO:0012505 GO:0015031 GO:0015833 GO:0017016 GO:0019899 GO:0031267 GO:0031967 GO:0031975 GO:0032991 GO:0033036 GO:0034613 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045184 GO:0046907 GO:0051020 GO:0051168 GO:0051169 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0070727 GO:0071702 GO:0071705 GO:0140104 GO:0140142

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

IBN_N

Protein Analysis

605

Amino Acids

64.77

Weight (kDa)

7.14

Isoelectric Point (pI)

34.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ILVD_EDD_N	PF00920	82 - 399	2.2e-132	Dihydroxy-acid/6-phosphogluconate dehydratase N-terminal
ILV_EDD_C	PF24877	411 - 601	5.8e-74	Dihydroxy-acid/6-phosphogluconate dehydratase C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002358)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G06120 AT5G06120 AT5G06120 AT5G06120 AT5G06120 AT5G06120 AT5G06120 AT5G06120 AT5G06120 AT5G06120
fragaria_vesca	FvH4_7g04530 FvH4_7g04530 FvH4_7g04530 FvH4_7g04530 FvH4_7g04530 FvH4_7g04530 FvH4_7g04530 FvH4_7g04530 FvH4_7g04530
malus_domestica	MD02G1207800.v1.1 MD07G1118000.v1.1
prunus_persica	Prupe.2G050900_v2.0.a1 Prupe.2G050900_v2.0.a1 Prupe.2G050900_v2.0.a1 Prupe.2G050900_v2.0.a1 Prupe.2G051400_v2.0.a1
pyrus_communis	pycom02g17010 pycom07g10620
rosa_chinensis	RchiOBHm_Chr1g0329811
rosa_laevigata	RLG00000029862
rosa_multiflora	Rmu_co8519431.1_g000001 Rmu_sc0003459.1_g000016
rosa_roxburghii	Rroxscaffold_4G00320670
rosa_rugosa	Rorug01G0083100 Rorug01G0083200 Rorug01G0083300 Rorug01G0083400
rosa_samantha	Rh1AG101400 Rh1BG080600 Rh1CG097100 Rh1DG104700
rosa_wichuraiana	Rw1G008010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	309
Acc36I	ACCTGC	2 cut(s)	309, 1505
AccI	GTMKAC	4 cut(s)	23, 135, 737, 1220
AccII	CGCG	2 cut(s)	61, 889
AciI	CCGC	9 cut(s)	50, 59, 61, 64, 105, 114, 630, 838, 887
AclWI	GGATC	6 cut(s)	170, 183, 657, 670, 809, 958
AcoI	YGGCCR	2 cut(s)	44, 1585
AcsI	RAATTY	2 cut(s)	1417, 1755
AcuI	CTGAAG	2 cut(s)	831, 1620
AcyI	GRCGYC	3 cut(s)	231, 333, 378
AfaI	GTAC	6 cut(s)	158, 275, 529, 1095, 1763, 1782
AfiI	CCNNNNNNNGG	7 cut(s)	172, 254, 270, 316, 716, 1463, 1551
AflII	CTTAAG	1 cut(s)	1061
AgsI	TTSAA	7 cut(s)	367, 767, 1373, 1423, 1634, 1664, 1794
AjnI	CCWGG	7 cut(s)	186, 502, 523, 592, 986, 999, 1468
AluBI	AGCT	9 cut(s)	148, 162, 423, 770, 795, 1118, 1206, 1397, 1790
AluI	AGCT	9 cut(s)	148, 162, 423, 770, 795, 1118, 1206, 1397, 1790
Alw21I	GWGCWC	1 cut(s)	681
Alw26I	GTCTC	1 cut(s)	452
AlwI	GGATC	6 cut(s)	170, 183, 657, 670, 809, 958
AoxI	GGCC	8 cut(s)	44, 201, 307, 318, 342, 544, 997, 1585
ApeKI	GCWGC	1 cut(s)	1394
ApoI	RAATTY	2 cut(s)	1417, 1755
AseI	ATTAAT	1 cut(s)	1628
AspLEI	GCGC	2 cut(s)	11, 716
AspS9I	GGNCC	8 cut(s)	72, 307, 544, 997, 1355, 1454, 1466, 1616
AsuC2I	CCSGG	3 cut(s)	711, 1177, 1225
AsuHPI	GGTGA	2 cut(s)	1265, 1642
AvaII	GGWCC	5 cut(s)	72, 1355, 1454, 1466, 1616
BalI	TGGCCA	1 cut(s)	1587
BamHI	GGATCC	2 cut(s)	175, 662
BanII	GRGCYC	2 cut(s)	225, 475
Bbv12I	GWGCWC	1 cut(s)	681
BbvCI	CCTCAGC	1 cut(s)	54
BbvI	GCAGC	1 cut(s)	1406
BccI	CCATC	5 cut(s)	41, 101, 479, 1541, 1696
BceAI	ACGGC	4 cut(s)	110, 116, 305, 756
BciT130I	CCWGG	7 cut(s)	188, 504, 525, 594, 988, 1001, 1470
BciVI	GTATCC	1 cut(s)	637
BcnI	CCSGG	3 cut(s)	711, 1177, 1225
BcoDI	GTCTC	1 cut(s)	452
BfaI	CTAG	4 cut(s)	405, 432, 1013, 1068
BfmI	CTRYAG	2 cut(s)	418, 1314
BfoI	RGCGCY	2 cut(s)	12, 717
BfrI	CTTAAG	1 cut(s)	1061
BfuAI	ACCTGC	2 cut(s)	309, 1505
BfuI	GTATCC	1 cut(s)	637
BglII	AGATCT	2 cut(s)	639, 1057
BisI	GCNGC	4 cut(s)	59, 62, 838, 1395
BlsI	GCNGC	4 cut(s)	60, 63, 839, 1396
Bme18I	GGWCC	5 cut(s)	72, 1355, 1454, 1466, 1616
BmgT120I	GGNCC	8 cut(s)	72, 307, 544, 997, 1355, 1454, 1466, 1616
BmiI	GGNNCC	4 cut(s)	177, 664, 1044, 1455
BmrI	ACTGGG	1 cut(s)	1732
BmsI	GCATC	2 cut(s)	376, 1790
BmuI	ACTGGG	1 cut(s)	1732
BplI	GAGNNNNNCTC	2 cut(s)	207, 239
Bpu10I	CCTNAGC	1 cut(s)	54
BpuMI	CCSGG	3 cut(s)	711, 1177, 1225
BsaAI	YACGTR	1 cut(s)	615
BsaHI	GRCGYC	3 cut(s)	231, 333, 378
BsaJI	CCNNGG	7 cut(s)	59, 186, 187, 593, 604, 1245, 1750
BsaWI	WCCGGW	1 cut(s)	360
BsaXI	ACNNNNNCTCC	2 cut(s)	639, 669
Bsc4I	CCNNNNNNNGG	7 cut(s)	172, 254, 270, 316, 716, 1463, 1551
Bse118I	RCCGGY	2 cut(s)	546, 805
Bse1I	ACTGG	3 cut(s)	1191, 1497, 1727
Bse3DI	GCAATG	2 cut(s)	120, 546
BseBI	CCWGG	7 cut(s)	188, 504, 525, 594, 988, 1001, 1470
BseDI	CCNNGG	7 cut(s)	59, 186, 187, 593, 604, 1245, 1750
BseGI	GGATG	7 cut(s)	33, 93, 835, 1096, 1684, 1805, 1816
BseLI	CCNNNNNNNGG	7 cut(s)	172, 254, 270, 316, 716, 1463, 1551
BseMI	GCAATG	2 cut(s)	120, 546
BseMII	CTCAG	4 cut(s)	68, 212, 488, 1182
BseNI	ACTGG	3 cut(s)	1191, 1497, 1727
BseRI	GAGGAG	3 cut(s)	69, 1394, 1461
BseXI	GCAGC	1 cut(s)	1406
BseYI	CCCAGC	3 cut(s)	304, 716, 845
BsgI	GTGCAG	1 cut(s)	1533
Bsh1236I	CGCG	2 cut(s)	61, 889
BshFI	GGCC	8 cut(s)	46, 203, 309, 320, 344, 546, 999, 1587
BsiHKAI	GWGCWC	1 cut(s)	681
BsiSI	CCGG	8 cut(s)	43, 345, 361, 547, 710, 806, 1176, 1224
BslFI	GGGAC	3 cut(s)	169, 415, 1655
BslI	CCNNNNNNNGG	7 cut(s)	172, 254, 270, 316, 716, 1463, 1551
BsmAI	GTCTC	1 cut(s)	452
BsmFI	GGGAC	3 cut(s)	169, 415, 1655
BsmI	GAATGC	1 cut(s)	1201
BsnI	GGCC	8 cut(s)	46, 203, 309, 320, 344, 546, 999, 1587
Bsp1286I	GDGCHC	3 cut(s)	225, 475, 681
Bsp1407I	TGTACA	3 cut(s)	1093, 1761, 1780
Bsp143I	GATC	8 cut(s)	175, 252, 639, 662, 814, 950, 1057, 1693
BspACI	CCGC	9 cut(s)	50, 59, 61, 64, 105, 114, 630, 838, 887
BspANI	GGCC	8 cut(s)	46, 203, 309, 320, 344, 546, 999, 1587
BspCNI	CTCAG	4 cut(s)	67, 211, 487, 1183
BspFNI	CGCG	2 cut(s)	61, 889
BspHI	TCATGA	1 cut(s)	567
BspLI	GGNNCC	4 cut(s)	177, 664, 1044, 1455
BspMI	ACCTGC	2 cut(s)	309, 1505
BspPI	GGATC	6 cut(s)	170, 183, 657, 670, 809, 958
BspQI	GCTCTTC	1 cut(s)	802
BspTI	CTTAAG	1 cut(s)	1061
BsrDI	GCAATG	2 cut(s)	120, 546
BsrFI	RCCGGY	2 cut(s)	546, 805
BsrGI	TGTACA	3 cut(s)	1093, 1761, 1780
BsrI	ACTGG	3 cut(s)	1191, 1497, 1727
BssAI	RCCGGY	2 cut(s)	546, 805
BssECI	CCNNGG	7 cut(s)	59, 186, 187, 593, 604, 1245, 1750
BssMI	GATC	8 cut(s)	175, 252, 639, 662, 814, 950, 1057, 1693
BssNAI	GTATAC	1 cut(s)	738
BssNI	GRCGYC	3 cut(s)	231, 333, 378
BssT1I	CCWWGG	2 cut(s)	604, 1245
Bst1107I	GTATAC	1 cut(s)	738
Bst2UI	CCWGG	7 cut(s)	188, 504, 525, 594, 988, 1001, 1470
Bst4CI	ACNGT	6 cut(s)	373, 463, 934, 1171, 1654, 1751
Bst6I	CTCTTC	1 cut(s)	802
BstACI	GRCGYC	3 cut(s)	231, 333, 378
BstAFI	CTTAAG	1 cut(s)	1061
BstAPI	GCANNNNNTGC	1 cut(s)	288
BstAUI	TGTACA	3 cut(s)	1093, 1761, 1780
BstBAI	YACGTR	1 cut(s)	615
BstC8I	GCNNGC	3 cut(s)	425, 548, 1475
BstDEI	CTNAG	4 cut(s)	54, 198, 474, 1191
BstDSI	CCRYGG	2 cut(s)	59, 1750
BstEII	GGTNACC	1 cut(s)	1271
BstENI	CCTNNNNNAGG	1 cut(s)	314
BstF5I	GGATG	7 cut(s)	33, 93, 835, 1096, 1684, 1805, 1816
BstFNI	CGCG	2 cut(s)	61, 889
BstH2I	RGCGCY	2 cut(s)	12, 717
BstHHI	GCGC	2 cut(s)	11, 716
BstKTI	GATC	8 cut(s)	178, 255, 642, 665, 817, 953, 1060, 1696
BstMAI	GTCTC	1 cut(s)	452
BstMBI	GATC	8 cut(s)	175, 252, 639, 662, 814, 950, 1057, 1693
BstMWI	GCNNNNNNNGC	7 cut(s)	58, 113, 122, 288, 767, 1196, 1391
BstNI	CCWGG	7 cut(s)	188, 504, 525, 594, 988, 1001, 1470
BstNSI	RCATGY	3 cut(s)	298, 415, 1477
BstPI	GGTNACC	1 cut(s)	1271
BstSFI	CTRYAG	2 cut(s)	418, 1314
BstSNI	TACGTA	1 cut(s)	615
BstUI	CGCG	2 cut(s)	61, 889
BstV1I	GCAGC	1 cut(s)	1406
BstX2I	RGATCY	6 cut(s)	175, 639, 662, 814, 950, 1057
BstXI	CCANNNNNNTGG	1 cut(s)	994
BstYI	RGATCY	6 cut(s)	175, 639, 662, 814, 950, 1057
BstZ17I	GTATAC	1 cut(s)	738
BsuI	GTATCC	1 cut(s)	637
BsuRI	GGCC	8 cut(s)	46, 203, 309, 320, 344, 546, 999, 1587
BtgI	CCRYGG	2 cut(s)	59, 1750
BtsCI	GGATG	7 cut(s)	33, 93, 835, 1096, 1684, 1805, 1816
BtsIMutI	CAGTG	4 cut(s)	388, 482, 1184, 1504
BveI	ACCTGC	2 cut(s)	309, 1505
Cac8I	GCNNGC	3 cut(s)	425, 548, 1475
CciI	TCATGA	1 cut(s)	567
CfoI	GCGC	2 cut(s)	11, 716
Cfr10I	RCCGGY	2 cut(s)	546, 805
Cfr13I	GGNCC	8 cut(s)	72, 307, 544, 997, 1355, 1454, 1466, 1616
Cfr42I	CCGCGG	1 cut(s)	62
CseI	GACGC	3 cut(s)	239, 322, 367
Csp6I	GTAC	6 cut(s)	157, 274, 528, 1094, 1762, 1781
CviQI	GTAC	6 cut(s)	157, 274, 528, 1094, 1762, 1781
DdeI	CTNAG	4 cut(s)	54, 198, 474, 1191
DpnI	GATC	8 cut(s)	177, 254, 641, 664, 816, 952, 1059, 1695
DpnII	GATC	8 cut(s)	175, 252, 639, 662, 814, 950, 1057, 1693
DraI	TTTAAA	1 cut(s)	882
EaeI	YGGCCR	2 cut(s)	44, 1585
Eam1104I	CTCTTC	1 cut(s)	802
EarI	CTCTTC	1 cut(s)	802
EciI	GGCGGA	4 cut(s)	79, 94, 103, 619
Eco105I	TACGTA	1 cut(s)	615
Eco130I	CCWWGG	2 cut(s)	604, 1245
Eco24I	GRGCYC	2 cut(s)	225, 475
Eco47I	GGWCC	5 cut(s)	72, 1355, 1454, 1466, 1616
Eco57I	CTGAAG	2 cut(s)	831, 1620
Eco91I	GGTNACC	1 cut(s)	1271
EcoNI	CCTNNNNNAGG	1 cut(s)	314
EcoO65I	GGTNACC	1 cut(s)	1271
EcoRII	CCWGG	7 cut(s)	186, 502, 523, 592, 986, 999, 1468
EcoT14I	CCWWGG	2 cut(s)	604, 1245
EcoT38I	GRGCYC	2 cut(s)	225, 475
ErhI	CCWWGG	2 cut(s)	604, 1245
FaqI	GGGAC	3 cut(s)	169, 415, 1655
FauNDI	CATATG	1 cut(s)	1592
FblI	GTMKAC	4 cut(s)	23, 135, 737, 1220
Fnu4HI	GCNGC	4 cut(s)	59, 62, 838, 1395
FokI	GGATG	6 cut(s)	20, 80, 842, 1103, 1691, 1812
FriOI	GRGCYC	2 cut(s)	225, 475
Fsp4HI	GCNGC	4 cut(s)	59, 62, 838, 1395
FspBI	CTAG	4 cut(s)	405, 432, 1013, 1068
GlaI	GCGC	2 cut(s)	10, 715
GluI	GCNGC	4 cut(s)	59, 62, 838, 1395
GsaI	CCCAGC	3 cut(s)	308, 720, 849
HaeII	RGCGCY	2 cut(s)	12, 717
HaeIII	GGCC	8 cut(s)	46, 203, 309, 320, 344, 546, 999, 1587
HapII	CCGG	8 cut(s)	43, 345, 361, 547, 710, 806, 1176, 1224
HgaI	GACGC	3 cut(s)	239, 322, 367
HhaI	GCGC	2 cut(s)	11, 716
Hin1I	GRCGYC	3 cut(s)	231, 333, 378
Hin6I	GCGC	2 cut(s)	9, 714
HinP1I	GCGC	2 cut(s)	9, 714
HincII	GTYRAC	4 cut(s)	136, 1488, 1542, 1689
HindII	GTYRAC	4 cut(s)	136, 1488, 1542, 1689
HindIII	AAGCTT	2 cut(s)	768, 1204
HinfI	GANTC	1 cut(s)	1408
HpaI	GTTAAC	2 cut(s)	1488, 1689
HpaII	CCGG	8 cut(s)	43, 345, 361, 547, 710, 806, 1176, 1224
HphI	GGTGA	2 cut(s)	1265, 1642
Hpy166II	GTNNAC	9 cut(s)	24, 136, 738, 1096, 1221, 1488, 1542, 1568, 1689
Hpy188I	TCNGA	7 cut(s)	98, 229, 316, 639, 1026, 1241, 1458
Hpy188III	TCNNGA	7 cut(s)	568, 1013, 1261, 1560, 1598, 1697, 1774
Hpy8I	GTNNAC	9 cut(s)	24, 136, 738, 1096, 1221, 1488, 1542, 1568, 1689
Hpy99I	CGWCG	5 cut(s)	131, 137, 140, 233, 377
HpyAV	CCTTC	8 cut(s)	319, 323, 1220, 1331, 1367, 1453, 1519, 1604
HpyCH4III	ACNGT	6 cut(s)	373, 463, 934, 1171, 1654, 1751
HpyCH4IV	ACGT	1 cut(s)	614
HpyF10VI	GCNNNNNNNGC	7 cut(s)	58, 113, 122, 288, 767, 1196, 1391
HpyF3I	CTNAG	4 cut(s)	54, 198, 474, 1191
HpySE526I	ACGT	1 cut(s)	614
Hsp92I	GRCGYC	3 cut(s)	231, 333, 378
HspAI	GCGC	2 cut(s)	9, 714
KroI	GCCGGC	1 cut(s)	546
KroNI	GCCGGC	1 cut(s)	548
KspAI	GTTAAC	2 cut(s)	1488, 1689
KspI	CCGCGG	1 cut(s)	62
Kzo9I	GATC	8 cut(s)	175, 252, 639, 662, 814, 950, 1057, 1693
LguI	GCTCTTC	1 cut(s)	802
LmnI	GCTCC	2 cut(s)	66, 167
Lsp1109I	GCAGC	1 cut(s)	1406
LweI	GCATC	2 cut(s)	376, 1790
MaeI	CTAG	4 cut(s)	405, 432, 1013, 1068
MaeII	ACGT	1 cut(s)	614
MaeIII	GTNAC	8 cut(s)	509, 698, 928, 966, 1165, 1171, 1271, 1804
MalI	GATC	8 cut(s)	177, 254, 641, 664, 816, 952, 1059, 1695
MboI	GATC	8 cut(s)	175, 252, 639, 662, 814, 950, 1057, 1693
MboII	GAAGA	5 cut(s)	154, 789, 824, 1683, 1725
MflI	RGATCY	6 cut(s)	175, 639, 662, 814, 950, 1057
MhlI	GDGCHC	3 cut(s)	225, 475, 681
MlsI	TGGCCA	1 cut(s)	1587
MluCI	AATT	6 cut(s)	531, 863, 975, 1417, 1629, 1755
MluNI	TGGCCA	1 cut(s)	1587
MmeI	TCCRAC	2 cut(s)	252, 807
Mox20I	TGGCCA	1 cut(s)	1587
MroNI	GCCGGC	1 cut(s)	546
MscI	TGGCCA	1 cut(s)	1587
Msp20I	TGGCCA	1 cut(s)	1587
MspA1I	CMGCKG	2 cut(s)	61, 1118
MspCI	CTTAAG	1 cut(s)	1061
MspI	CCGG	8 cut(s)	43, 345, 361, 547, 710, 806, 1176, 1224
Mva1269I	GAATGC	1 cut(s)	1201
MvaI	CCWGG	7 cut(s)	188, 504, 525, 594, 988, 1001, 1470
MvnI	CGCG	2 cut(s)	61, 889
MwoI	GCNNNNNNNGC	7 cut(s)	58, 113, 122, 288, 767, 1196, 1391
NaeI	GCCGGC	1 cut(s)	548
NciI	CCSGG	3 cut(s)	711, 1177, 1225
NdeI	CATATG	1 cut(s)	1592
NdeII	GATC	8 cut(s)	175, 252, 639, 662, 814, 950, 1057, 1693
NgoMIV	GCCGGC	1 cut(s)	546
NlaIV	GGNNCC	4 cut(s)	177, 664, 1044, 1455
NmuCI	GTSAC	3 cut(s)	509, 1271, 1804
NspI	RCATGY	3 cut(s)	298, 415, 1477
PaeI	GCATGC	1 cut(s)	1477
PagI	TCATGA	1 cut(s)	567
PaqCI	CACCTGC	1 cut(s)	309
PasI	CCCWGGG	1 cut(s)	187
PciSI	GCTCTTC	1 cut(s)	802
PcsI	WCGNNNNNNNCGW	1 cut(s)	135
PctI	GAATGC	1 cut(s)	1201
PdiI	GCCGGC	1 cut(s)	548
PfeI	GAWTC	1 cut(s)	1408
PkrI	GCNGC	4 cut(s)	60, 63, 839, 1396
Ppu21I	YACGTR	1 cut(s)	615
PshBI	ATTAAT	1 cut(s)	1628
Psp6I	CCWGG	7 cut(s)	186, 502, 523, 592, 986, 999, 1468
PspEI	GGTNACC	1 cut(s)	1271
PspFI	CCCAGC	3 cut(s)	304, 716, 845
PspGI	CCWGG	7 cut(s)	186, 502, 523, 592, 986, 999, 1468
PspN4I	GGNNCC	4 cut(s)	177, 664, 1044, 1455
PspPI	GGNCC	8 cut(s)	72, 307, 544, 997, 1355, 1454, 1466, 1616
PsuI	RGATCY	6 cut(s)	175, 639, 662, 814, 950, 1057
PvuII	CAGCTG	1 cut(s)	1118
RsaI	GTAC	6 cut(s)	158, 275, 529, 1095, 1763, 1782
RsaNI	GTAC	6 cut(s)	157, 274, 528, 1094, 1762, 1781
SacII	CCGCGG	1 cut(s)	62
SalI	GTCGAC	1 cut(s)	134
SapI	GCTCTTC	1 cut(s)	802
SatI	GCNGC	4 cut(s)	59, 62, 838, 1395
Sau3AI	GATC	8 cut(s)	175, 252, 639, 662, 814, 950, 1057, 1693
Sau96I	GGNCC	8 cut(s)	72, 307, 544, 997, 1355, 1454, 1466, 1616
SduI	GDGCHC	3 cut(s)	225, 475, 681
SfaNI	GCATC	2 cut(s)	376, 1790
SfcI	CTRYAG	2 cut(s)	418, 1314
Sfr303I	CCGCGG	1 cut(s)	62
SgrBI	CCGCGG	1 cut(s)	62
SgrDI	CGTCGACG	1 cut(s)	134
SinI	GGWCC	5 cut(s)	72, 1355, 1454, 1466, 1616
SmlI	CTYRAG	1 cut(s)	1061
SmoI	CTYRAG	1 cut(s)	1061
SnaBI	TACGTA	1 cut(s)	615
SphI	GCATGC	1 cut(s)	1477
Sse9I	AATT	6 cut(s)	531, 863, 975, 1417, 1629, 1755
SsiI	CCGC	9 cut(s)	50, 59, 61, 64, 105, 114, 630, 838, 887
SspMI	CTAG	4 cut(s)	405, 432, 1013, 1068
StyI	CCWWGG	2 cut(s)	604, 1245
TaaI	ACNGT	6 cut(s)	373, 463, 934, 1171, 1654, 1751
TaiI	ACGT	1 cut(s)	617
TaqI	TCGA	2 cut(s)	135, 1711
TaqII	GACCGA	1 cut(s)	1559
TasI	AATT	6 cut(s)	531, 863, 975, 1417, 1629, 1755
TatI	WGTACW	4 cut(s)	156, 1093, 1761, 1780
TauI	GCSGC	3 cut(s)	61, 64, 840
TfiI	GAWTC	1 cut(s)	1408
TscAI	CASTG	4 cut(s)	388, 482, 1191, 1504
TseFI	GTSAC	3 cut(s)	509, 1271, 1804
TseI	GCWGC	1 cut(s)	1394
Tsp45I	GTSAC	3 cut(s)	509, 1271, 1804
TspDTI	ATGAA	1 cut(s)	1430
TspGWI	ACGGA	3 cut(s)	188, 228, 256
TspRI	CASTG	4 cut(s)	388, 482, 1191, 1504
Vha464I	CTTAAG	1 cut(s)	1061
VpaK11BI	GGWCC	5 cut(s)	72, 1355, 1454, 1466, 1616
VspI	ATTAAT	1 cut(s)	1628
XagI	CCTNNNNNAGG	1 cut(s)	314
XapI	RAATTY	2 cut(s)	1417, 1755
XbaI	TCTAGA	1 cut(s)	1012
XceI	RCATGY	3 cut(s)	298, 415, 1477
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1286, 1504
XmiI	GTMKAC	4 cut(s)	23, 135, 737, 1220
XspI	CTAG	4 cut(s)	405, 432, 1013, 1068

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.