Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0002358

Physical Location & Seq

Genomic Coordinates Reverse (-)

14499225 .. 14515959

Gene Structure 16735 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1118000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3198 bp

ATGCAACTCGGAGAAATATATGATCGAGTTTTCGAAGAGATGGAGGGTTTAAGGCAACTGGAGGCGTTGTGTGAGAGGTTGTACAATTCGCAGGACTCGGTCGAAAGGGCTCATGCCGAGAACACTCTCAAATGCTTTTCGGTGAACATAGAATACATTTCGCAGTGCCAGTACATTCTCGACAATGCCATGACTCCCTACGCGTTGATGCTGGCTAGTTCTAGCTTGTTGAAGCAAGTCACTGAGCAAAAACTTGCTCTGCAGCTTCGTCTCGACATCCGGAATTACCTTATTAACTATTTGGCCACTCGAGGACGCGAGTTACAGCCATTCGTGACTGCCTCTTTAGTCCAACTCTTATGTCGGCTCACCAAGTTTGGGTGGTTTGATGATGATCGATTCTGGGATGTGGTGAAACAGTCAATGAACTTCTTGAATCAGGCAACGTCTGATCACTATGCCATTGGTTTGAAGATACTTAACCAACTCGTGTCTGAGATGAGTCAGCCTAATCCTGGGTTGCCTTCAACGCATCATCGGAGGGTTGCATGCTCCTTCAGGGACGAGTCTCTCTTTCAAATATTCCAAATATCCTTAACTTCATTGCGTCAACTGGAAAGTAATGTTGCAAATCAATTGCAAGAGTTGGCTCTTTCGCTTTCACTTAAATGCCTATCTTTTGATTTTGTTGGGACCTCACTTGATGAAAGTTCTGAAGAATTTGGTACTGTTCAGATTCCATCGGGTTGGAAGTCAACATTGGAGGATCCTGCAACACTTCAAGTCTTCTTTGATTACTATGCCAATACAAAGCCCCCCCTTTCAAAGGAGGCACTGGAGTGCTTGGTGCGACTAGCTTCTGTTAGACGTTCTTTGTTTACAAGTGATCCTGCCCGTTCAAAGTTTCTGTCCCATTTAATCACAGGAACCAAAGAAATCCTACAAACTGGGCAAGGTCTTGCTGATCATGATAATTACCATGAGTATTGTCGTCTTCTTGGACGATTCCGAGTGAATTATCAGTTGTCAGAGCTTGTGACTGTGGAAGGCTATAGTGACTGGATACGTTTAGTAGCAGAATTCACGTTAAAGTCTTTGCACTCCTGGAAGTGGGCCAGCAGCAGCGTATACTACCTTTTAGGACTTTGGTCTAGATTGGTGACATCTGTACCATACTTGAAAGGTGATGCACCCAGCATGCTCGATGAATTTGTACCTAAGATTACTGAAGGTTTCATCACATCAAGATTTAACTCCGTGCAGGATGGTTCGCTTGATGATCTTTCTGAAAACCCATTAGACAACGTTGAACTTCTTCAAGATCAGTTGGATTGTTTTACATACCTCTGTAGATTCCAGTATGAAAGCAGTAGTTTGTATATAATAAGCATAGTGGAGCCTCTTTTGCAGGTCTACACGGAAAGAGCTCGAGTTCAGACCAGTGATACCAGTGACCTCTCTATTATTGAAGCAAAACTTGCTTGGATTGTTCACATAGTTGCTGCAATTCTCAAGATAAAACAATGTACTGGGTGCAGTACCGAATCACAAGAAGCACTTGATGCAGAACTTTCAGCACGCATCTTGCAATTAATAAATGTCACTGACAGTGGGGTACAGAGCCAGAGATATGGTGAAACAAGCAAGCAAAGACTTGATCGTGCAATTCTTACCTTTTTTCAACATTTTCGGAAGTCATATGTGGGTGATCAGGCCATGCATTCTTCGAGGCAGTTATATGCCCGCCTTTCTGAGCTTCTTGGACTTCATGATCATCTTTTAATGTTAAATGTCATTGTTGGCAAGATTGCTACAAACCTGAAATGTTACACGGAGAATGAGGAGGTCATTGGTCACACCCTGAGTTTGTTCTTGGAGCTGGCATCTGGATACATGAGTGGCAAGCTACTCTTGAAGTTGGATACTGTCAAATTTATACTTGCGAATCATACTAGGGAGCATTTCCCTTTTCTGGAAGAGTATAGATGTTCTCGCAGCAGAACAACTTTCTATTACATAATTGGCTGGTTAATATTCATGGAAGACAGCCCTGTCAAATTTAGATCTTCCATGGATCCACTTTTGCAAGTTTTCGTCAATCTGGAATCAACTCCTGATTCAATGTTTCGTACTGATGCTGTAAAGTATGGATTAATTGCGTTGACGAGAGATCTTAGAGGAATTGCCATGGCCACAAATAGTCGGAGAACTTATGGCTTTCTGTTTGATTGGTTGTATCCTGCACACATGCCACTTCTTTTGAAAGGCATCTTGCACTGGTCCGATACACCAGAGGTGACCACTCCTTTGTTGAAATTCATGGCTGAGTTTGCATTGAACAAAGCCCAACGCTTGACTTTTGATTCATCTTCTCCTAATGGAATACTTCTTTTTCGAGAAGTCAGTAAACTGATTGTTGCATATGGGTCAAGAATTTTGTCTCTTCCAAATGTTGCTGATATATATGCCTTCAAATACAAGGGAATTTGGATTTCTTTAACTATTCTTACAAGAGCTCTTGCTGGAAACTATGTCAACTTTGGGGTGTTCGAGCTATATGGTGATAGAGCGCTTGCTGATGCACTTGATATTGCACTGAAGATGACATTATCAATACCTTTGGCTGATGTATTGGCATTCCGGAAGTTGTCAAAGGCCTATTTTGCATTCTTGGAGGTTGTATTCAACAGCCATATAGTTTATATACTGAATCTGGATACCAGTACTTTTCTGCATATAGTTGGATCCCTTGAATCTGGAATTAAAGGTCTAGATACAGGTATTGCATCACAGTGTGCATCTGCGGTTGAAAATTTGGCTGCTTTCTACTTCAACAACATAACCATGGGTGAGGCACCCACATCACCTACTGCAGTCAATCTTGCTCGTCACATTTCAGACTGCCCCAACTTGTTTCCAGAAGTACTGAAGACACTGTTTGAGATTGTTTTATTCGAGGAAAGTAACAACCAGTGGAATTTTAGCAGACCAATGCTGAGCTTGATACTTATTAATGAGCAGATATTCTCCGATTTGAAAGTTCATATCTTGGCTTCACAGCAAGCGGATCAACATCAACGGCTTTCCGAGTGTTTTGACAAGCTTATGGTGGATGTTACTAGAAGCTTGGATACAAAGAACAGAGACAAGTTCACCCAAAACTTGACAGTATTCAGGCGTGATTTTCGCTTGAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005049 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005643 GO:0005737 GO:0006611 GO:0006810 GO:0006886 GO:0006913 GO:0008104 GO:0008150 GO:0008536 GO:0012505 GO:0015031 GO:0015833 GO:0017016 GO:0019899 GO:0031267 GO:0031967 GO:0031975 GO:0032991 GO:0033036 GO:0034613 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045184 GO:0046907 GO:0051020 GO:0051168 GO:0051169 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0070727 GO:0071702 GO:0071705 GO:0140104 GO:0140142

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

IBN_N

Protein Analysis

1066

Amino Acids

121.37

Weight (kDa)

5.82

Isoelectric Point (pI)

42.5

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
IBN_N	PF03810	39 - 102	1.2e-06	Importin-beta N-terminal domain
TPR_XPO7	PF25795	424 - 665	5.6e-96	Exportin-7-like, TPR repeats

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0002358)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G06120 AT5G06120 AT5G06120 AT5G06120 AT5G06120 AT5G06120 AT5G06120 AT5G06120 AT5G06120 AT5G06120
fragaria_vesca	FvH4_7g04530 FvH4_7g04530 FvH4_7g04530 FvH4_7g04530 FvH4_7g04530 FvH4_7g04530 FvH4_7g04530 FvH4_7g04530 FvH4_7g04530
malus_domestica	MD02G1207800.v1.1 MD07G1118000.v1.1
prunus_persica	Prupe.2G050900_v2.0.a1 Prupe.2G050900_v2.0.a1 Prupe.2G050900_v2.0.a1 Prupe.2G050900_v2.0.a1 Prupe.2G051400_v2.0.a1
pyrus_communis	pycom02g17010 pycom07g10620
rosa_chinensis	RchiOBHm_Chr1g0329811
rosa_laevigata	RLG00000029862
rosa_multiflora	Rmu_co8519431.1_g000001 Rmu_sc0003459.1_g000016
rosa_roxburghii	Rroxscaffold_4G00320670
rosa_rugosa	Rorug01G0083100 Rorug01G0083200 Rorug01G0083300 Rorug01G0083400
rosa_samantha	Rh1AG101400 Rh1BG080600 Rh1CG097100 Rh1DG104700
rosa_wichuraiana	Rw1G008010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	2051
Acc36I	ACCTGC	1 cut(s)	1399
AccB1I	GGYRCC	1 cut(s)	2854
AccI	GTMKAC	2 cut(s)	1128, 1413
AccII	CGCG	2 cut(s)	203, 318
AccIII	TCCGGA	2 cut(s)	279, 2640
AciI	CCGC	3 cut(s)	1744, 2804, 3065
AclI	AACGTT	1 cut(s)	1305
AclWI	GGATC	8 cut(s)	761, 774, 881, 2069, 2082, 2739, 2752, 3075
AcoI	YGGCCR	2 cut(s)	303, 2190
AcuI	CTGAAG	5 cut(s)	541, 735, 1248, 2618, 2948
AdeI	CACNNNGTG	1 cut(s)	2795
AfeI	AGCGCT	1 cut(s)	2571
AfiI	CCNNNNNNNGG	5 cut(s)	378, 515, 826, 1110, 1972
AflIII	ACRYGT	1 cut(s)	201
AjnI	CCWGG	2 cut(s)	514, 1103
AjuI	GAANNNNNNNTTGG	2 cut(s)	743, 775
AleI	CACNNNNGTG	1 cut(s)	838
Alw21I	GWGCWC	2 cut(s)	1429, 2518
Alw26I	GTCTC	4 cut(s)	275, 573, 2445, 3138
AlwI	GGATC	8 cut(s)	761, 774, 881, 2069, 2082, 2739, 2752, 3075
Ama87I	CYCGRG	2 cut(s)	309, 1428
Aor13HI	TCCGGA	2 cut(s)	279, 2640
Aor51HI	AGCGCT	1 cut(s)	2571
AoxI	GGCC	5 cut(s)	303, 1113, 1713, 2190, 2655
ApeKI	GCWGC	6 cut(s)	262, 1119, 1122, 1502, 1995, 2819
ArsI	GACNNNNNNTTYG	4 cut(s)	893, 925, 2290, 2322
AseI	ATTAAT	3 cut(s)	1592, 2153, 3012
Asp700I	GAANNNNTTC	1 cut(s)	1314
AspLEI	GCGC	1 cut(s)	2572
AspS9I	GGNCC	3 cut(s)	693, 1113, 2280
AsuII	TTCGAA	1 cut(s)	33
AvaI	CYCGRG	2 cut(s)	309, 1428
AvaII	GGWCC	2 cut(s)	693, 2280
BaeI	ACNNNNGTAYC	4 cut(s)	1152, 1185, 1882, 1915
BalI	TGGCCA	2 cut(s)	305, 2192
BamHI	GGATCC	3 cut(s)	766, 2074, 2744
BanI	GGYRCC	1 cut(s)	2854
BanII	GRGCYC	3 cut(s)	112, 1429, 2518
BarI	GAAGNNNNNNTAC	2 cut(s)	3115, 3147
BauI	CACGAG	1 cut(s)	488
BbsI	GAAGAC	4 cut(s)	778, 986, 2049, 2936
Bbv12I	GWGCWC	2 cut(s)	1429, 2518
BbvI	GCAGC	6 cut(s)	274, 1131, 1134, 1489, 2007, 2806
BccI	CCATC	3 cut(s)	34, 748, 1259
BceAI	ACGGC	1 cut(s)	3095
BciT130I	CCWGG	2 cut(s)	516, 1105
BciVI	GTATCC	6 cut(s)	1056, 1883, 1915, 2247, 2710, 3124
BclI	TGATCA	4 cut(s)	451, 964, 1708, 1771
BcoDI	GTCTC	4 cut(s)	275, 573, 2445, 3138
BfaI	CTAG	7 cut(s)	216, 222, 854, 1152, 1953, 2771, 3120
BfmI	CTRYAG	4 cut(s)	260, 1051, 1348, 2871
BfoI	RGCGCY	1 cut(s)	2573
BfuAI	ACCTGC	1 cut(s)	1399
BfuI	GTATCC	6 cut(s)	1056, 1883, 1915, 2247, 2710, 3124
BglII	AGATCT	2 cut(s)	2063, 2170
BisI	GCNGC	6 cut(s)	263, 1120, 1123, 1503, 1996, 2820
BlpI	GCTNAGC	1 cut(s)	2996
BlsI	GCNGC	6 cut(s)	264, 1121, 1124, 1504, 1997, 2821
BmcAI	AGTACT	2 cut(s)	2725, 2925
Bme1390I	CCNGG	2 cut(s)	516, 1105
Bme18I	GGWCC	2 cut(s)	693, 2280
BmeT110I	CYCGRG	2 cut(s)	309, 1428
BmgT120I	GGNCC	3 cut(s)	693, 1113, 2280
BmiI	GGNNCC	7 cut(s)	694, 768, 928, 1398, 2076, 2746, 2856
BmrFI	CCNGG	2 cut(s)	516, 1105
BmrI	ACTGGG	2 cut(s)	957, 1539
BmuI	ACTGGG	2 cut(s)	957, 1539
BoxI	GACNNNNGTC	1 cut(s)	1147
BpiI	GAAGAC	4 cut(s)	778, 986, 2049, 2936
BpmI	CTGGAG	2 cut(s)	80, 857
Bpu1102I	GCTNAGC	1 cut(s)	2996
Bpu14I	TTCGAA	1 cut(s)	33
BpuEI	CTTGAG	1 cut(s)	1496
Bsa29I	ATCGAT	1 cut(s)	397
BsaBI	GATNNNNATC	2 cut(s)	393, 3072
BsaJI	CCNNGG	4 cut(s)	515, 2070, 2187, 2844
BsaWI	WCCGGW	2 cut(s)	279, 2640
BsaXI	ACNNNNNCTCC	2 cut(s)	53, 83
Bsc4I	CCNNNNNNNGG	5 cut(s)	378, 515, 826, 1110, 1972
Bse3DI	GCAATG	1 cut(s)	602
Bse8I	GATNNNNATC	2 cut(s)	393, 3072
BseAI	TCCGGA	2 cut(s)	279, 2640
BseBI	CCWGG	2 cut(s)	516, 1105
BseCI	ATCGAT	1 cut(s)	397
BseDI	CCNNGG	4 cut(s)	515, 2070, 2187, 2844
BseGI	GGATG	4 cut(s)	276, 412, 1270, 3118
BseJI	GATNNNNATC	2 cut(s)	393, 3072
BseLI	CCNNNNNNNGG	5 cut(s)	378, 515, 826, 1110, 1972
BseMI	GCAATG	1 cut(s)	602
BseMII	CTCAG	6 cut(s)	234, 486, 1743, 1853, 2316, 2987
BseRI	GAGGAG	1 cut(s)	1856
BseXI	GCAGC	6 cut(s)	274, 1131, 1134, 1489, 2007, 2806
BseYI	CCCAGC	1 cut(s)	1193
BsgI	GTGCAG	3 cut(s)	1280, 1555, 2226
Bsh1236I	CGCG	2 cut(s)	203, 318
Bsh1285I	CGRYCG	1 cut(s)	102
BshFI	GGCC	5 cut(s)	305, 1115, 1715, 2192, 2657
BshNI	GGYRCC	1 cut(s)	2854
BshVI	ATCGAT	1 cut(s)	397
BsiEI	CGRYCG	1 cut(s)	102
BsiHKAI	GWGCWC	2 cut(s)	1429, 2518
BsiHKCI	CYCGRG	2 cut(s)	309, 1428
BsiSI	CCGG	2 cut(s)	280, 2641
BslFI	GGGAC	3 cut(s)	575, 706, 895
BslI	CCNNNNNNNGG	5 cut(s)	378, 515, 826, 1110, 1972
BsmAI	GTCTC	4 cut(s)	275, 573, 2445, 3138
BsmBI	CGTCTC	1 cut(s)	275
BsmFI	GGGAC	3 cut(s)	575, 706, 895
BsmI	GAATGC	3 cut(s)	1720, 2636, 2666
BsnI	GGCC	5 cut(s)	305, 1115, 1715, 2192, 2657
BsoBI	CYCGRG	2 cut(s)	309, 1428
Bsp119I	TTCGAA	1 cut(s)	33
Bsp1286I	GDGCHC	3 cut(s)	112, 1429, 2518
Bsp13I	TCCGGA	2 cut(s)	279, 2640
Bsp1407I	TGTACA	1 cut(s)	81
Bsp1720I	GCTNAGC	1 cut(s)	2996
Bsp19I	CCATGG	3 cut(s)	2070, 2187, 2844
BspACI	CCGC	3 cut(s)	1744, 2804, 3065
BspANI	GGCC	5 cut(s)	305, 1115, 1715, 2192, 2657
BspCNI	CTCAG	6 cut(s)	235, 487, 1744, 1854, 2317, 2988
BspDI	ATCGAT	1 cut(s)	397
BspEI	TCCGGA	2 cut(s)	279, 2640
BspFNI	CGCG	2 cut(s)	203, 318
BspHI	TCATGA	2 cut(s)	967, 1768
BspLI	GGNNCC	7 cut(s)	694, 768, 928, 1398, 2076, 2746, 2856
BspMAI	CTGCAG	2 cut(s)	264, 2875
BspMI	ACCTGC	1 cut(s)	1399
BspPI	GGATC	8 cut(s)	761, 774, 881, 2069, 2082, 2739, 2752, 3075
BspT104I	TTCGAA	1 cut(s)	33
BspT107I	GGYRCC	1 cut(s)	2854
BsrDI	GCAATG	1 cut(s)	602
BsrGI	TGTACA	1 cut(s)	81
BssECI	CCNNGG	4 cut(s)	515, 2070, 2187, 2844
BssNAI	GTATAC	1 cut(s)	1129
BssSI	CACGAG	1 cut(s)	488
BssT1I	CCWWGG	3 cut(s)	2070, 2187, 2844
Bst1107I	GTATAC	1 cut(s)	1129
Bst2BI	CACGAG	1 cut(s)	488
Bst2UI	CCWGG	2 cut(s)	516, 1105
Bst4CI	ACNGT	8 cut(s)	420, 730, 1042, 1610, 1927, 2793, 2937, 3169
Bst6I	CTCTTC	3 cut(s)	30, 1971, 2448
BstAPI	GCANNNNNTGC	2 cut(s)	1478, 1562
BstAUI	TGTACA	1 cut(s)	81
BstBI	TTCGAA	1 cut(s)	33
BstDEI	CTNAG	8 cut(s)	243, 495, 1218, 1752, 1862, 2174, 2325, 2996
BstDSI	CCRYGG	3 cut(s)	2070, 2187, 2844
BstEII	GGTNACC	1 cut(s)	2296
BstENI	CCTNNNNNAGG	1 cut(s)	824
BstF5I	GGATG	4 cut(s)	276, 412, 1270, 3118
BstFNI	CGCG	2 cut(s)	203, 318
BstH2I	RGCGCY	1 cut(s)	2573
BstHHI	GCGC	1 cut(s)	2572
BstMAI	GTCTC	4 cut(s)	275, 573, 2445, 3138
BstMCI	CGRYCG	1 cut(s)	102
BstMWI	GCNNNNNNNGC	6 cut(s)	529, 1405, 1478, 1562, 2330, 2663
BstNI	CCWGG	2 cut(s)	516, 1105
BstNSI	RCATGY	3 cut(s)	552, 1201, 2251
BstPAI	GACNNNNGTC	1 cut(s)	1147
BstPI	GGTNACC	1 cut(s)	2296
BstSCI	CCNGG	2 cut(s)	514, 1103
BstSFI	CTRYAG	4 cut(s)	260, 1051, 1348, 2871
BstUI	CGCG	2 cut(s)	203, 318
BstV1I	GCAGC	6 cut(s)	274, 1131, 1134, 1489, 2007, 2806
BstV2I	GAAGAC	4 cut(s)	778, 986, 2049, 2936
BstX2I	RGATCY	5 cut(s)	766, 2063, 2074, 2170, 2744
BstXI	CCANNNNNNTGG	2 cut(s)	747, 1631
BstYI	RGATCY	5 cut(s)	766, 2063, 2074, 2170, 2744
BstZ17I	GTATAC	1 cut(s)	1129
Bsu15I	ATCGAT	1 cut(s)	397
BsuI	GTATCC	6 cut(s)	1056, 1883, 1915, 2247, 2710, 3124
BsuRI	GGCC	5 cut(s)	305, 1115, 1715, 2192, 2657
BsuTUI	ATCGAT	1 cut(s)	397
BtgI	CCRYGG	3 cut(s)	2070, 2187, 2844
BtsCI	GGATG	4 cut(s)	276, 412, 1270, 3118
BtsI	GCAGTG	1 cut(s)	170
BveI	ACCTGC	1 cut(s)	1399
CciI	TCATGA	2 cut(s)	967, 1768
CfoI	GCGC	1 cut(s)	2572
Cfr13I	GGNCC	3 cut(s)	693, 1113, 2280
ClaI	ATCGAT	1 cut(s)	397
CseI	GACGC	2 cut(s)	324, 596
CspCI	CAANNNNNGTGG	2 cut(s)	2241, 2276
DdeI	CTNAG	8 cut(s)	243, 495, 1218, 1752, 1862, 2174, 2325, 2996
DraIII	CACNNNGTG	1 cut(s)	2795
DrdI	GACNNNNNNGTC	1 cut(s)	2051
DseDI	GACNNNNNNGTC	1 cut(s)	2051
EaeI	YGGCCR	2 cut(s)	303, 2190
Eam1104I	CTCTTC	3 cut(s)	30, 1971, 2448
EarI	CTCTTC	3 cut(s)	30, 1971, 2448
Ecl136II	GAGCTC	2 cut(s)	1427, 2516
Eco130I	CCWWGG	3 cut(s)	2070, 2187, 2844
Eco147I	AGGCCT	1 cut(s)	2657
Eco24I	GRGCYC	3 cut(s)	112, 1429, 2518
Eco47I	GGWCC	2 cut(s)	693, 2280
Eco47III	AGCGCT	1 cut(s)	2571
Eco53kI	GAGCTC	2 cut(s)	1427, 2516
Eco57I	CTGAAG	5 cut(s)	541, 735, 1248, 2618, 2948
Eco88I	CYCGRG	2 cut(s)	309, 1428
Eco91I	GGTNACC	1 cut(s)	2296
EcoICRI	GAGCTC	2 cut(s)	1427, 2516
EcoNI	CCTNNNNNAGG	1 cut(s)	824
EcoO109I	RGGNCCY	1 cut(s)	693
EcoO65I	GGTNACC	1 cut(s)	2296
EcoRI	GAATTC	1 cut(s)	1079
EcoRII	CCWGG	2 cut(s)	514, 1103
EcoT14I	CCWWGG	3 cut(s)	2070, 2187, 2844
EcoT22I	ATGCAT	1 cut(s)	1722
EcoT38I	GRGCYC	3 cut(s)	112, 1429, 2518
ErhI	CCWWGG	3 cut(s)	2070, 2187, 2844
Esp3I	CGTCTC	1 cut(s)	275
FalI	AAGNNNNNCTT	6 cut(s)	1461, 1493, 1542, 1574, 1895, 1927
FaqI	GGGAC	3 cut(s)	575, 706, 895
FauI	CCCGC	1 cut(s)	1751
FauNDI	CATATG	2 cut(s)	1699, 2422
FbaI	TGATCA	4 cut(s)	451, 964, 1708, 1771
FblI	GTMKAC	2 cut(s)	1128, 1413
Fnu4HI	GCNGC	6 cut(s)	263, 1120, 1123, 1503, 1996, 2820
FokI	GGATG	4 cut(s)	263, 419, 1277, 3125
FriOI	GRGCYC	3 cut(s)	112, 1429, 2518
Fsp4HI	GCNGC	6 cut(s)	263, 1120, 1123, 1503, 1996, 2820
FspBI	CTAG	7 cut(s)	216, 222, 854, 1152, 1953, 2771, 3120
GlaI	GCGC	1 cut(s)	2571
GluI	GCNGC	6 cut(s)	263, 1120, 1123, 1503, 1996, 2820
GsaI	CCCAGC	1 cut(s)	1197
GsuI	CTGGAG	2 cut(s)	80, 857
HaeII	RGCGCY	1 cut(s)	2573
HaeIII	GGCC	5 cut(s)	305, 1115, 1715, 2192, 2657
HapII	CCGG	2 cut(s)	280, 2641
HgaI	GACGC	2 cut(s)	324, 596
HhaI	GCGC	1 cut(s)	2572
Hin6I	GCGC	1 cut(s)	2570
HinP1I	GCGC	1 cut(s)	2570
HincII	GTYRAC	4 cut(s)	611, 756, 2163, 2536
HindII	GTYRAC	4 cut(s)	611, 756, 2163, 2536
HindIII	AAGCTT	2 cut(s)	3101, 3124
HpaII	CCGG	2 cut(s)	280, 2641
HpyAV	CCTTC	5 cut(s)	534, 565, 1040, 1223, 2479
HpyCH4III	ACNGT	8 cut(s)	420, 730, 1042, 1610, 1927, 2793, 2937, 3169
HpyCH4IV	ACGT	5 cut(s)	446, 868, 1066, 1085, 1305
HpyF10VI	GCNNNNNNNGC	6 cut(s)	529, 1405, 1478, 1562, 2330, 2663
HpyF3I	CTNAG	8 cut(s)	243, 495, 1218, 1752, 1862, 2174, 2325, 2996
HpySE526I	ACGT	5 cut(s)	446, 868, 1066, 1085, 1305
HspAI	GCGC	1 cut(s)	2570
Kpn2I	TCCGGA	2 cut(s)	279, 2640
Ksp22I	TGATCA	4 cut(s)	451, 964, 1708, 1771
LmnI	GCTCC	4 cut(s)	557, 1396, 1876, 1957
Lsp1109I	GCAGC	6 cut(s)	274, 1131, 1134, 1489, 2007, 2806
MaeI	CTAG	7 cut(s)	216, 222, 854, 1152, 1953, 2771, 3120
MaeII	ACGT	5 cut(s)	446, 868, 1066, 1085, 1305
MfeI	CAATTG	1 cut(s)	635
MflI	RGATCY	5 cut(s)	766, 2063, 2074, 2170, 2744
MhlI	GDGCHC	3 cut(s)	112, 1429, 2518
MlsI	TGGCCA	2 cut(s)	305, 2192
MluI	ACGCGT	1 cut(s)	201
MluNI	TGGCCA	2 cut(s)	305, 2192
MlyI	GAGTC	4 cut(s)	89, 187, 511, 575
MmeI	TCCRAC	6 cut(s)	376, 728, 1308, 1899, 2183, 2722
Mox20I	TGGCCA	2 cut(s)	305, 2192
Mph1103I	ATGCAT	1 cut(s)	1722
MroI	TCCGGA	2 cut(s)	279, 2640
MroXI	GAANNNNTTC	1 cut(s)	1314
MscI	TGGCCA	2 cut(s)	305, 2192
MslI	CAYNNNNRTG	4 cut(s)	667, 838, 2791, 2843
Msp20I	TGGCCA	2 cut(s)	305, 2192
MspI	CCGG	2 cut(s)	280, 2641
MspR9I	CCNGG	2 cut(s)	516, 1105
MunI	CAATTG	1 cut(s)	635
Mva1269I	GAATGC	3 cut(s)	1720, 2636, 2666
MvaI	CCWGG	2 cut(s)	516, 1105
MvnI	CGCG	2 cut(s)	203, 318
MwoI	GCNNNNNNNGC	6 cut(s)	529, 1405, 1478, 1562, 2330, 2663
NcoI	CCATGG	3 cut(s)	2070, 2187, 2844
NdeI	CATATG	2 cut(s)	1699, 2422
NlaIV	GGNNCC	7 cut(s)	694, 768, 928, 1398, 2076, 2746, 2856
NmeAIII	GCCGAG	1 cut(s)	142
NsiI	ATGCAT	1 cut(s)	1722
NspI	RCATGY	3 cut(s)	552, 1201, 2251
NspV	TTCGAA	1 cut(s)	33
OliI	CACNNNNGTG	1 cut(s)	838
PaeI	GCATGC	2 cut(s)	552, 1201
PaeR7I	CTCGAG	2 cut(s)	309, 1428
PagI	TCATGA	2 cut(s)	967, 1768
PceI	AGGCCT	1 cut(s)	2657
PctI	GAATGC	3 cut(s)	1720, 2636, 2666
PdmI	GAANNNNTTC	1 cut(s)	1314
PflFI	GACNNNGTC	1 cut(s)	98
PfoI	TCCNGGA	1 cut(s)	1103
PkrI	GCNGC	6 cut(s)	264, 1121, 1124, 1504, 1997, 2821
PleI	GAGTC	4 cut(s)	89, 187, 510, 574
PpsI	GAGTC	4 cut(s)	89, 187, 510, 574
PpuMI	RGGWCCY	1 cut(s)	693
PshAI	GACNNNNGTC	1 cut(s)	1147
PshBI	ATTAAT	3 cut(s)	1592, 2153, 3012
Psp124BI	GAGCTC	2 cut(s)	1429, 2518
Psp1406I	AACGTT	1 cut(s)	1305
Psp5II	RGGWCCY	1 cut(s)	693
Psp6I	CCWGG	2 cut(s)	514, 1103
PspEI	GGTNACC	1 cut(s)	2296
PspFI	CCCAGC	1 cut(s)	1193
PspGI	CCWGG	2 cut(s)	514, 1103
PspN4I	GGNNCC	7 cut(s)	694, 768, 928, 1398, 2076, 2746, 2856
PspPI	GGNCC	3 cut(s)	693, 1113, 2280
PspPPI	RGGWCCY	1 cut(s)	693
PspXI	VCTCGAGB	2 cut(s)	309, 1428
PsrI	GAACNNNNNNTAC	2 cut(s)	137, 169
PstI	CTGCAG	2 cut(s)	264, 2875
PsuI	RGATCY	5 cut(s)	766, 2063, 2074, 2170, 2744
PsyI	GACNNNGTC	1 cut(s)	98
RseI	CAYNNNNRTG	4 cut(s)	667, 838, 2791, 2843
SacI	GAGCTC	2 cut(s)	1429, 2518
SatI	GCNGC	6 cut(s)	263, 1120, 1123, 1503, 1996, 2820
Sau96I	GGNCC	3 cut(s)	693, 1113, 2280
ScaI	AGTACT	2 cut(s)	2725, 2925
SchI	GAGTC	4 cut(s)	89, 187, 511, 575
ScrFI	CCNGG	2 cut(s)	516, 1105
SduI	GDGCHC	3 cut(s)	112, 1429, 2518
SfcI	CTRYAG	4 cut(s)	260, 1051, 1348, 2871
Sfr274I	CTCGAG	2 cut(s)	309, 1428
SfuI	TTCGAA	1 cut(s)	33
SinI	GGWCC	2 cut(s)	693, 2280
SlaI	CTCGAG	2 cut(s)	309, 1428
SmiMI	CAYNNNNRTG	4 cut(s)	667, 838, 2791, 2843
SmlI	CTYRAG	3 cut(s)	309, 1428, 1511
SmoI	CTYRAG	3 cut(s)	309, 1428, 1511
SphI	GCATGC	2 cut(s)	552, 1201
SseBI	AGGCCT	1 cut(s)	2657
SsiI	CCGC	3 cut(s)	1744, 2804, 3065
SspI	AATATT	2 cut(s)	582, 2034
SspMI	CTAG	7 cut(s)	216, 222, 854, 1152, 1953, 2771, 3120
SstI	GAGCTC	2 cut(s)	1429, 2518
StuI	AGGCCT	1 cut(s)	2657
StyD4I	CCNGG	2 cut(s)	514, 1103
StyI	CCWWGG	3 cut(s)	2070, 2187, 2844
TaaI	ACNGT	8 cut(s)	420, 730, 1042, 1610, 1927, 2793, 2937, 3169
TaiI	ACGT	5 cut(s)	449, 871, 1069, 1088, 1308
TaqII	GACCGA	1 cut(s)	88
TatI	WGTACW	5 cut(s)	81, 171, 1526, 2723, 2923
TseI	GCWGC	6 cut(s)	262, 1119, 1122, 1502, 1995, 2819
TspGWI	ACGGA	3 cut(s)	1246, 1433, 1847
Tth111I	GACNNNGTC	1 cut(s)	98
VpaK11BI	GGWCC	2 cut(s)	693, 2280
VspI	ATTAAT	3 cut(s)	1592, 2153, 3012
XagI	CCTNNNNNAGG	1 cut(s)	824
XbaI	TCTAGA	2 cut(s)	1151, 2770
XceI	RCATGY	3 cut(s)	552, 1201, 2251
XhoI	CTCGAG	2 cut(s)	309, 1428
XmiI	GTMKAC	2 cut(s)	1128, 1413
XmnI	GAANNNNTTC	1 cut(s)	1314
XspI	CTAG	7 cut(s)	216, 222, 854, 1152, 1953, 2771, 3120
ZrmI	AGTACT	2 cut(s)	2725, 2925
Zsp2I	ATGCAT	1 cut(s)	1722

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.