Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0002358

Physical Location & Seq

Genomic Coordinates Forward (+)

19551866 .. 19570155

Gene Structure 18290 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ55907

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3159 bp

ATGGAGGGGTTGAGGCAACTGGAGGCCTTGTGTGAGAGGTTGTACAATTCGCAGGACTCGGTTGAGCGAGCCCACGCTGAAAACACTCTCAAATGCTTTTCTGTGAACATTGAATACATTTCGCAATGCCAATACATTCTTGATAATGCCATGACGCCGTATGCTCTGATGCTAGCTAGCTCTAGTTTGTTGAAGCAAGTCACTGATCATAGCCTTGCCTTGCAGCTTCGTCTTGATATCCGGAGCTACCTTGTAAACTATCTGGCCACTAGAGGACCTGAGTTGCAGCCGTTTGTTACTGCTTCCTTAATCCAACTCTTATGTCGACTCACCAAGTTTGGGTGGTTTGATGATGACAGATTCAAGGATGTGGTTAAGGAGTCCATGAACTTCTTGAACCAGGCAACTTCTGATCACTATGCCATTGGTTTGAAGATATTAAACCAACTTGTGTCTGAGATGAATCAGCCTAATCCAGGGTTGCCTTCAACACATCATCGAAGGGTTGCCTGCAACTTCAGGGATCAGTCTCTTTTCCAAATATTCCAGATCTCTTTAACATCATTGCGCCAACTGGAAAACAATGTTGAAAGTCGTTTGCGAGAGTTGGCTCTTTCTCTTTCTCTTAAATGTTTATCTTTTGATTTTGTTGGGACATCAATTGATGAAAGTTCAGAAGAATTTGGTACTGTTCAGATCCCAACTTCTTGGAGGTCAGTTTTGGAGGATCCTTCAACACTTCAAGTCTTCTTTGATTACTATGCCATTACAAAGGCCCCTCTGTCAAAGGAGGCACTGGAGTGCTTGGTGCGATTGGCTTCTGTTAGACGATCTTTGTTTACAAACGATGCTGCTCGTTCAAAGTTTTTGGCCCATTTGATGACAGGAACCAAAGAAATCCTACAAACAGGGCAAGGTCTTGCTGATCATGATAATTACCATGAGTATTGCCGTCTTCTTGGACGTTTCCGAGTTAATTATCAGTTGTCAGAGCTTGTGAATGTGGAAGGTTATAGTGACTGGATTCGATTAGTAGCAGAGTTCACGCTAAAGTCTTTGCAGTCCTGGAAGTGGGCCAGCAGCAGTGTGTACTATCTTTTAGGACTGTGGTCTAGATTGGTGACATCTGTACCATACTTGAAAGGCGAGGCACCCAGCTTGCTTGAAGAATTTGTGCCTAAGATTGCCGAAAGTTTCATCACATCGAGATTTAACTCTGTGCAGGATGGATCTTCAGATGATCTTTCTGAAAACCCACTAGACAATGTTGAACTTCTTCAGGATCAGTTAGATTGCTTCCCTTACCTCTGCAGATTCCAGTATGAAGGCAGTAGTTTATATATAATAAACACAGTGGAACCCATTTTACAAATATACACGGAAAGAGCTCGGATGCCACCCAGTGAAATCAGTGACCTTTCTGTCATTGAAGCCAAACTTGCTTGGATTGTTCATATCGTTGCTGCTATACTTAAGATAAAACAATGTACTGGTTGTAGTGTTGAGTCCCAAGAACTATTTGATGCGGAACTTTCAGCTCGCATCTTGCAATTGATTAATGTTACCGACAGTGGGGTACACAGCCAGAGATATGGTGAAATAAGCAAGCAAAGGCTTGACCGTGCAATTCTTACCTTTTTCCAACATTTTCGGAAGTCTTATGTTGGTGATCAGGCCATGCATTCTTCAAAGCAGTTATATGCGCGCCTTTCTGAACTTCTTGGACTTCATGATCATCTTTTAATGTTGAATGTGATTGTTGGAAAGATTGCTACAAACCTGAAATGTTACACTGAGAGTGAGGAGGTCATTGGTCACACCTTGAGTTTGTTCTTGGAGCTGGCATCTGGATACATGACTGGCAAGCTGCTTTTGAAGTTGGATACTGTTAAATTTATAGTGTCCAATCATACTAGGGAGCACTTCCCCTTTTTAGAAGAATATAGATGTTCTCGTAGTAGAACAACTTTTTATTTTACAATTGGTTGGTTAATATTCATGGAAGACAGCCCTGTGAAGTTTAAATCTTCAATGGATCCACTTTTGCAAGTTTTTATCAATCTCGAATCAACTCCTGATGCAATGTTTCGCACTGATAATGTAAAGTATGCATTAATCGGGCTGATGAGGGATCTTCGGGGAATTGCCATGGCCACAAATAGTCGCAGAACGTTTGGGCTTCTGTTTGATTGGCTGTATCCTGCACACATGCCACTTCTTTTGAAAGGCATCTTGCATTGGTCTGACACACCAGAGGTTACTACCCCTTTGTTGAAATTCATGGCTGAGTTTGTACTGAACAAAGCCCAACGATTGACTTTTGACTCATCTTCTCCTAATGGCATACTTCTTTTCCGAGAAGTCAGTAAACTGATTGTTGCTTATGGGTCAAGGATTCTGTCTCTTCCAAACGTTGCTGATATATATGCCTTCAAATACAAGGGAATATGGATTTCTTTAACTATTCTCACGAGAGCTCTTGCTGGAAACTATGTCAACTTTGGGGTGTTTGAGCTATATGGAGATAGAGCACTTTCTGATGCACTTGATATTGCACTAAAGTTGGCATTATCAATTCCTTTGGCTGATATATTGGCATTCCGTAAGCTGACAAGAGCCTACTTTGCGTTTTTAGAGGTCTTATTCAACAGCCACATAGTTTACATACTGAATCTGGATACCAGTACTTTTATGCATATTGTTGGATCTCTTGAATCTGGCCTCAAAGGTCTAGATACAAGTATCTCATCACAGTGTGCGTCTGCTGTAGATAATTTGGCTGCCTTTTATTTTAACAACATTACCATGGGCGAGGCACCTACATTACCTACTGCAGTAAATCTTGCTCGCCACATTGCAGACTGCCCCAATTTGTTTCCAGAAATACTGAAGACTCTGTTTGAGATTGTTTTATTCGAGGACTGTGGCAACCAGTGGAGTCTTAGCAGACCAATGCTGAGCTTAATTCTTATTAGTGAGCAGATATTCTCTGATTTGAAAGTTCGGATCATGGCTTCACAGCCAGTGGATCATCACCAGCGGCTTTCCCTGTGTTTTGACAAGCTAATGGCAGATGTTACTAGGAGCTTGGATTCAAAGAACAGGGACAAGTTCACTCAAAACCTCACTGTATTCAGAAATGATTTTCGTGTGAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005049 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005643 GO:0005737 GO:0006611 GO:0006810 GO:0006886 GO:0006913 GO:0008104 GO:0008150 GO:0008536 GO:0012505 GO:0015031 GO:0015833 GO:0017016 GO:0019899 GO:0031267 GO:0031967 GO:0031975 GO:0032991 GO:0033036 GO:0034613 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045184 GO:0046907 GO:0051020 GO:0051168 GO:0051169 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0070727 GO:0071702 GO:0071705 GO:0140104 GO:0140142

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

IBN_N

Protein Analysis

1052

Amino Acids

119.74

Weight (kDa)

6.05

Isoelectric Point (pI)

42.32

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
IBN_N	PF03810	26 - 89	1.7e-07	Importin-beta N-terminal domain
TPR_XPO7	PF25795	411 - 652	2.9e-95	Exportin-7-like, TPR repeats

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0002358)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G06120 AT5G06120 AT5G06120 AT5G06120 AT5G06120 AT5G06120 AT5G06120 AT5G06120 AT5G06120 AT5G06120
fragaria_vesca	FvH4_7g04530 FvH4_7g04530 FvH4_7g04530 FvH4_7g04530 FvH4_7g04530 FvH4_7g04530 FvH4_7g04530 FvH4_7g04530 FvH4_7g04530
malus_domestica	MD02G1207800.v1.1 MD07G1118000.v1.1
prunus_persica	Prupe.2G050900_v2.0.a1 Prupe.2G050900_v2.0.a1 Prupe.2G050900_v2.0.a1 Prupe.2G050900_v2.0.a1 Prupe.2G051400_v2.0.a1
pyrus_communis	pycom02g17010 pycom07g10620
rosa_chinensis	RchiOBHm_Chr1g0329811
rosa_laevigata	RLG00000029862
rosa_multiflora	Rmu_co8519431.1_g000001 Rmu_sc0003459.1_g000016
rosa_roxburghii	Rroxscaffold_4G00320670
rosa_rugosa	Rorug01G0083100 Rorug01G0083200 Rorug01G0083300 Rorug01G0083400
rosa_samantha	Rh1AG101400 Rh1BG080600 Rh1CG097100 Rh1DG104700
rosa_wichuraiana	Rw1G008010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1421
AccB1I	GGYRCC	2 cut(s)	1150, 2815
AccI	GTMKAC	1 cut(s)	325
AccII	CGCG	1 cut(s)	1705
AccIII	TCCGGA	1 cut(s)	240
AciI	CCGC	2 cut(s)	1526, 3040
AclI	AACGTT	2 cut(s)	2171, 2412
AcoI	YGGCCR	2 cut(s)	264, 2151
AcsI	RAATTY	4 cut(s)	680, 1169, 1892, 2276
AcuI	CTGAAG	4 cut(s)	502, 1218, 1262, 2909
AcyI	GRCGYC	1 cut(s)	155
AdeI	CACNNNGTG	2 cut(s)	1403, 2756
AfaI	GTAC	8 cut(s)	44, 688, 1091, 1131, 1489, 1578, 2295, 2686
AfiI	CCNNNNNNNGG	4 cut(s)	339, 476, 1071, 1572
AflII	CTTAAG	1 cut(s)	1472
AjnI	CCWGG	3 cut(s)	399, 475, 1064
AleI	CACNNNNGTG	1 cut(s)	799
Alw21I	GWGCWC	4 cut(s)	1390, 1923, 2479, 2533
Alw26I	GTCTC	2 cut(s)	534, 2406
Aor13HI	TCCGGA	1 cut(s)	240
AoxI	GGCC	8 cut(s)	24, 264, 774, 870, 1074, 1674, 2151, 2719
ApeKI	GCWGC	7 cut(s)	223, 286, 851, 1080, 1463, 1867, 2780
ApoI	RAATTY	4 cut(s)	680, 1169, 1892, 2276
AseI	ATTAAT	2 cut(s)	1557, 2114
Asp700I	GAANNNNTTC	1 cut(s)	1275
AspLEI	GCGC	3 cut(s)	570, 1705, 1707
AspS9I	GGNCC	4 cut(s)	275, 775, 871, 1074
AsuHPI	GGTGA	5 cut(s)	322, 1132, 1607, 1679, 3026
AsuNHI	GCTAGC	2 cut(s)	172, 176
AvaII	GGWCC	1 cut(s)	275
BaeI	ACNNNNGTAYC	2 cut(s)	1113, 1146
BalI	TGGCCA	2 cut(s)	266, 2153
BamHI	GGATCC	2 cut(s)	727, 2035
BanI	GGYRCC	2 cut(s)	1150, 2815
BanII	GRGCYC	3 cut(s)	73, 1390, 2479
BauI	CACGAG	1 cut(s)	2470
BbsI	GAAGAC	4 cut(s)	739, 947, 2010, 2897
Bbv12I	GWGCWC	4 cut(s)	1390, 1923, 2479, 2533
BbvI	GCAGC	7 cut(s)	235, 298, 838, 1092, 1450, 1854, 2767
BccI	CCATC	1 cut(s)	1220
BceAI	ACGGC	3 cut(s)	142, 274, 936
BciT130I	CCWGG	3 cut(s)	401, 477, 1066
BciVI	GTATCC	4 cut(s)	1844, 1876, 2208, 2671
BclI	TGATCA	5 cut(s)	205, 412, 925, 1669, 1732
BcoDI	GTCTC	2 cut(s)	534, 2406
BfaI	CTAG	9 cut(s)	173, 177, 183, 270, 1113, 1259, 1914, 2732, 3081
BfmI	CTRYAG	3 cut(s)	1309, 2766, 2832
BfrI	CTTAAG	1 cut(s)	1472
BfuI	GTATCC	4 cut(s)	1844, 1876, 2208, 2671
BglII	AGATCT	1 cut(s)	549
BisI	GCNGC	8 cut(s)	224, 287, 852, 1081, 1464, 1868, 2781, 3041
BlpI	GCTNAGC	1 cut(s)	2957
BlsI	GCNGC	8 cut(s)	225, 288, 853, 1082, 1465, 1869, 2782, 3042
BmcAI	AGTACT	1 cut(s)	2686
Bme1390I	CCNGG	3 cut(s)	401, 477, 1066
Bme18I	GGWCC	1 cut(s)	275
BmgT120I	GGNCC	4 cut(s)	275, 775, 871, 1074
BmiI	GGNNCC	7 cut(s)	729, 777, 889, 1152, 1359, 2037, 2817
BmrFI	CCNGG	3 cut(s)	401, 477, 1066
BmrI	ACTGGG	1 cut(s)	1395
BmsI	GCATC	9 cut(s)	159, 838, 1383, 1513, 1551, 1853, 2068, 2238, 2530
BmtI	GCTAGC	2 cut(s)	176, 180
BmuI	ACTGGG	1 cut(s)	1395
BoxI	GACNNNNGTC	1 cut(s)	1108
BpiI	GAAGAC	4 cut(s)	739, 947, 2010, 2897
BpmI	CTGGAG	2 cut(s)	41, 818
Bpu1102I	GCTNAGC	1 cut(s)	2957
BpuEI	CTTGAG	1 cut(s)	1843
BsaHI	GRCGYC	1 cut(s)	155
BsaJI	CCNNGG	3 cut(s)	476, 2148, 2805
BsaWI	WCCGGW	1 cut(s)	240
BsaXI	ACNNNNNCTCC	2 cut(s)	14, 44
Bsc4I	CCNNNNNNNGG	4 cut(s)	339, 476, 1071, 1572
Bse3DI	GCAATG	4 cut(s)	131, 563, 2088, 2853
BseAI	TCCGGA	1 cut(s)	240
BseBI	CCWGG	3 cut(s)	401, 477, 1066
BseDI	CCNNGG	3 cut(s)	476, 2148, 2805
BseGI	GGATG	3 cut(s)	373, 1231, 1398
BseLI	CCNNNNNNNGG	4 cut(s)	339, 476, 1071, 1572
BseMI	GCAATG	4 cut(s)	131, 563, 2088, 2853
BseMII	CTCAG	5 cut(s)	270, 447, 1785, 2277, 2948
BsePI	GCGCGC	1 cut(s)	1703
BseRI	GAGGAG	1 cut(s)	1817
BseXI	GCAGC	7 cut(s)	235, 298, 838, 1092, 1450, 1854, 2767
BseYI	CCCAGC	1 cut(s)	1154
BsgI	GTGCAG	2 cut(s)	1241, 2187
Bsh1236I	CGCG	1 cut(s)	1705
BshFI	GGCC	8 cut(s)	26, 266, 776, 872, 1076, 1676, 2153, 2721
BshNI	GGYRCC	2 cut(s)	1150, 2815
BsiHKAI	GWGCWC	4 cut(s)	1390, 1923, 2479, 2533
BsiSI	CCGG	1 cut(s)	241
BslFI	GGGAC	3 cut(s)	667, 1492, 3119
BslI	CCNNNNNNNGG	4 cut(s)	339, 476, 1071, 1572
BsmAI	GTCTC	2 cut(s)	534, 2406
BsmFI	GGGAC	3 cut(s)	667, 1492, 3119
BsmI	GAATGC	2 cut(s)	1681, 2597
BsnI	GGCC	8 cut(s)	26, 266, 776, 872, 1076, 1676, 2153, 2721
Bsp1286I	GDGCHC	5 cut(s)	73, 1390, 1923, 2479, 2533
Bsp13I	TCCGGA	1 cut(s)	240
Bsp1407I	TGTACA	1 cut(s)	42
Bsp1720I	GCTNAGC	1 cut(s)	2957
Bsp19I	CCATGG	2 cut(s)	2148, 2805
BspACI	CCGC	2 cut(s)	1526, 3040
BspANI	GGCC	8 cut(s)	26, 266, 776, 872, 1076, 1676, 2153, 2721
BspCNI	CTCAG	5 cut(s)	271, 448, 1786, 2278, 2949
BspEI	TCCGGA	1 cut(s)	240
BspFNI	CGCG	1 cut(s)	1705
BspHI	TCATGA	2 cut(s)	928, 1729
BspLI	GGNNCC	7 cut(s)	729, 777, 889, 1152, 1359, 2037, 2817
BspMAI	CTGCAG	2 cut(s)	1313, 2836
BspOI	GCTAGC	2 cut(s)	176, 180
BspT107I	GGYRCC	2 cut(s)	1150, 2815
BspTI	CTTAAG	1 cut(s)	1472
BsrDI	GCAATG	4 cut(s)	131, 563, 2088, 2853
BsrGI	TGTACA	1 cut(s)	42
BssECI	CCNNGG	3 cut(s)	476, 2148, 2805
BssHII	GCGCGC	1 cut(s)	1703
BssNI	GRCGYC	1 cut(s)	155
BssSI	CACGAG	1 cut(s)	2470
BssT1I	CCWWGG	2 cut(s)	2148, 2805
Bst2BI	CACGAG	1 cut(s)	2470
Bst2UI	CCWGG	3 cut(s)	401, 477, 1066
Bst4CI	ACNGT	9 cut(s)	691, 1107, 1354, 1571, 1622, 1888, 2754, 2924, 3130
Bst6I	CTCTTC	1 cut(s)	2409
BstACI	GRCGYC	1 cut(s)	155
BstAFI	CTTAAG	1 cut(s)	1472
BstAUI	TGTACA	1 cut(s)	42
BstDEI	CTNAG	7 cut(s)	279, 456, 1179, 1794, 2286, 2942, 2957
BstDSI	CCRYGG	2 cut(s)	2148, 2805
BstENI	CCTNNNNNAGG	1 cut(s)	474
BstF5I	GGATG	3 cut(s)	373, 1231, 1398
BstFNI	CGCG	1 cut(s)	1705
BstHHI	GCGC	3 cut(s)	570, 1705, 1707
BstMAI	GTCTC	2 cut(s)	534, 2406
BstMWI	GCNNNNNNNGC	2 cut(s)	1439, 2624
BstNI	CCWGG	3 cut(s)	401, 477, 1066
BstNSI	RCATGY	1 cut(s)	2212
BstPAI	GACNNNNGTC	1 cut(s)	1108
BstSCI	CCNGG	3 cut(s)	399, 475, 1064
BstSFI	CTRYAG	3 cut(s)	1309, 2766, 2832
BstUI	CGCG	1 cut(s)	1705
BstV1I	GCAGC	7 cut(s)	235, 298, 838, 1092, 1450, 1854, 2767
BstV2I	GAAGAC	4 cut(s)	739, 947, 2010, 2897
BstX2I	RGATCY	7 cut(s)	549, 696, 727, 1229, 2035, 2131, 2705
BstXI	CCANNNNNNTGG	2 cut(s)	708, 1592
BstYI	RGATCY	7 cut(s)	549, 696, 727, 1229, 2035, 2131, 2705
BsuI	GTATCC	4 cut(s)	1844, 1876, 2208, 2671
BsuRI	GGCC	8 cut(s)	26, 266, 776, 872, 1076, 1676, 2153, 2721
BtgI	CCRYGG	2 cut(s)	2148, 2805
BtsCI	GGATG	3 cut(s)	373, 1231, 1398
BtsI	GCAGTG	1 cut(s)	1090
CciI	TCATGA	2 cut(s)	928, 1729
CfoI	GCGC	3 cut(s)	570, 1705, 1707
Cfr13I	GGNCC	4 cut(s)	275, 775, 871, 1074
CseI	GACGC	2 cut(s)	163, 2748
Csp6I	GTAC	8 cut(s)	43, 687, 1090, 1130, 1488, 1577, 2294, 2685
CspCI	CAANNNNNGTGG	2 cut(s)	2202, 2237
CviQI	GTAC	8 cut(s)	43, 687, 1090, 1130, 1488, 1577, 2294, 2685
DdeI	CTNAG	7 cut(s)	279, 456, 1179, 1794, 2286, 2942, 2957
DraI	TTTAAA	1 cut(s)	2023
DraIII	CACNNNGTG	2 cut(s)	1403, 2756
DrdI	GACNNNNNNGTC	1 cut(s)	1421
DseDI	GACNNNNNNGTC	1 cut(s)	1421
EaeI	YGGCCR	2 cut(s)	264, 2151
Eam1104I	CTCTTC	1 cut(s)	2409
EarI	CTCTTC	1 cut(s)	2409
Ecl136II	GAGCTC	2 cut(s)	1388, 2477
Eco130I	CCWWGG	2 cut(s)	2148, 2805
Eco147I	AGGCCT	1 cut(s)	26
Eco24I	GRGCYC	3 cut(s)	73, 1390, 2479
Eco32I	GATATC	1 cut(s)	238
Eco47I	GGWCC	1 cut(s)	275
Eco53kI	GAGCTC	2 cut(s)	1388, 2477
Eco57I	CTGAAG	4 cut(s)	502, 1218, 1262, 2909
EcoICRI	GAGCTC	2 cut(s)	1388, 2477
EcoNI	CCTNNNNNAGG	1 cut(s)	474
EcoO109I	RGGNCCY	2 cut(s)	275, 775
EcoRII	CCWGG	3 cut(s)	399, 475, 1064
EcoRV	GATATC	1 cut(s)	238
EcoT14I	CCWWGG	2 cut(s)	2148, 2805
EcoT22I	ATGCAT	3 cut(s)	1683, 2113, 2697
EcoT38I	GRGCYC	3 cut(s)	73, 1390, 2479
ErhI	CCWWGG	2 cut(s)	2148, 2805
FalI	AAGNNNNNCTT	2 cut(s)	1422, 1454
FaqI	GGGAC	3 cut(s)	667, 1492, 3119
FbaI	TGATCA	5 cut(s)	205, 412, 925, 1669, 1732
FblI	GTMKAC	1 cut(s)	325
Fnu4HI	GCNGC	8 cut(s)	224, 287, 852, 1081, 1464, 1868, 2781, 3041
FokI	GGATG	3 cut(s)	380, 1238, 1405
FriOI	GRGCYC	3 cut(s)	73, 1390, 2479
Fsp4HI	GCNGC	8 cut(s)	224, 287, 852, 1081, 1464, 1868, 2781, 3041
FspBI	CTAG	9 cut(s)	173, 177, 183, 270, 1113, 1259, 1914, 2732, 3081
GlaI	GCGC	3 cut(s)	569, 1704, 1706
GluI	GCNGC	8 cut(s)	224, 287, 852, 1081, 1464, 1868, 2781, 3041
GsaI	CCCAGC	1 cut(s)	1158
GsuI	CTGGAG	2 cut(s)	41, 818
HaeIII	GGCC	8 cut(s)	26, 266, 776, 872, 1076, 1676, 2153, 2721
HapII	CCGG	1 cut(s)	241
HgaI	GACGC	2 cut(s)	163, 2748
HhaI	GCGC	3 cut(s)	570, 1705, 1707
Hin1I	GRCGYC	1 cut(s)	155
Hin6I	GCGC	3 cut(s)	568, 1703, 1705
HinP1I	GCGC	3 cut(s)	568, 1703, 1705
HincII	GTYRAC	2 cut(s)	326, 2497
HindII	GTYRAC	2 cut(s)	326, 2497
HpaII	CCGG	1 cut(s)	241
HphI	GGTGA	5 cut(s)	322, 1132, 1607, 1679, 3026
HpyAV	CCTTC	6 cut(s)	495, 495, 741, 1001, 1319, 2440
HpyCH4III	ACNGT	9 cut(s)	691, 1107, 1354, 1571, 1622, 1888, 2754, 2924, 3130
HpyCH4IV	ACGT	3 cut(s)	964, 2171, 2412
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1439, 2624
HpyF3I	CTNAG	7 cut(s)	279, 456, 1179, 1794, 2286, 2942, 2957
HpySE526I	ACGT	3 cut(s)	964, 2171, 2412
Hsp92I	GRCGYC	1 cut(s)	155
HspAI	GCGC	3 cut(s)	568, 1703, 1705
Kpn2I	TCCGGA	1 cut(s)	240
Ksp22I	TGATCA	5 cut(s)	205, 412, 925, 1669, 1732
LmnI	GCTCC	4 cut(s)	243, 1837, 1918, 3084
Lsp1109I	GCAGC	7 cut(s)	235, 298, 838, 1092, 1450, 1854, 2767
LweI	GCATC	9 cut(s)	159, 838, 1383, 1513, 1551, 1853, 2068, 2238, 2530
MaeI	CTAG	9 cut(s)	173, 177, 183, 270, 1113, 1259, 1914, 2732, 3081
MaeII	ACGT	3 cut(s)	964, 2171, 2412
MfeI	CAATTG	3 cut(s)	660, 1550, 1980
MflI	RGATCY	7 cut(s)	549, 696, 727, 1229, 2035, 2131, 2705
MhlI	GDGCHC	5 cut(s)	73, 1390, 1923, 2479, 2533
MlsI	TGGCCA	2 cut(s)	266, 2153
MluNI	TGGCCA	2 cut(s)	266, 2153
MlyI	GAGTC	7 cut(s)	50, 321, 389, 1514, 2318, 2887, 2947
MmeI	TCCRAC	5 cut(s)	337, 1666, 1741, 1860, 2683
Mox20I	TGGCCA	2 cut(s)	266, 2153
Mph1103I	ATGCAT	3 cut(s)	1683, 2113, 2697
MroI	TCCGGA	1 cut(s)	240
MroXI	GAANNNNTTC	1 cut(s)	1275
MscI	TGGCCA	2 cut(s)	266, 2153
MslI	CAYNNNNRTG	3 cut(s)	799, 2752, 2804
Msp20I	TGGCCA	2 cut(s)	266, 2153
MspA1I	CMGCKG	1 cut(s)	3040
MspCI	CTTAAG	1 cut(s)	1472
MspI	CCGG	1 cut(s)	241
MspR9I	CCNGG	3 cut(s)	401, 477, 1066
MunI	CAATTG	3 cut(s)	660, 1550, 1980
Mva1269I	GAATGC	2 cut(s)	1681, 2597
MvaI	CCWGG	3 cut(s)	401, 477, 1066
MvnI	CGCG	1 cut(s)	1705
MwoI	GCNNNNNNNGC	2 cut(s)	1439, 2624
NcoI	CCATGG	2 cut(s)	2148, 2805
NheI	GCTAGC	2 cut(s)	172, 176
NlaIV	GGNNCC	7 cut(s)	729, 777, 889, 1152, 1359, 2037, 2817
NmuCI	GTSAC	5 cut(s)	199, 1016, 1120, 1412, 1814
NsiI	ATGCAT	3 cut(s)	1683, 2113, 2697
NspI	RCATGY	1 cut(s)	2212
OliI	CACNNNNGTG	1 cut(s)	799
PagI	TCATGA	2 cut(s)	928, 1729
PauI	GCGCGC	1 cut(s)	1703
PceI	AGGCCT	1 cut(s)	26
PctI	GAATGC	2 cut(s)	1681, 2597
PdmI	GAANNNNTTC	1 cut(s)	1275
PfeI	GAWTC	9 cut(s)	360, 463, 1024, 1314, 2066, 2395, 2671, 2714, 3092
PfoI	TCCNGGA	1 cut(s)	1064
PkrI	GCNGC	8 cut(s)	225, 288, 853, 1082, 1465, 1869, 2782, 3042
PleI	GAGTC	7 cut(s)	50, 321, 388, 1513, 2318, 2887, 2946
PpsI	GAGTC	7 cut(s)	50, 321, 388, 1513, 2318, 2887, 2946
PpuMI	RGGWCCY	1 cut(s)	275
PshAI	GACNNNNGTC	1 cut(s)	1108
PshBI	ATTAAT	2 cut(s)	1557, 2114
Psp124BI	GAGCTC	2 cut(s)	1390, 2479
Psp1406I	AACGTT	2 cut(s)	2171, 2412
Psp5II	RGGWCCY	1 cut(s)	275
Psp6I	CCWGG	3 cut(s)	399, 475, 1064
PspFI	CCCAGC	1 cut(s)	1154
PspGI	CCWGG	3 cut(s)	399, 475, 1064
PspN4I	GGNNCC	7 cut(s)	729, 777, 889, 1152, 1359, 2037, 2817
PspPI	GGNCC	4 cut(s)	275, 775, 871, 1074
PspPPI	RGGWCCY	1 cut(s)	275
PsrI	GAACNNNNNNTAC	4 cut(s)	98, 130, 1350, 1382
PstI	CTGCAG	2 cut(s)	1313, 2836
PsuI	RGATCY	7 cut(s)	549, 696, 727, 1229, 2035, 2131, 2705
PteI	GCGCGC	1 cut(s)	1703
RsaI	GTAC	8 cut(s)	44, 688, 1091, 1131, 1489, 1578, 2295, 2686
RsaNI	GTAC	8 cut(s)	43, 687, 1090, 1130, 1488, 1577, 2294, 2685
RseI	CAYNNNNRTG	3 cut(s)	799, 2752, 2804
SacI	GAGCTC	2 cut(s)	1390, 2479
SalI	GTCGAC	1 cut(s)	324
SatI	GCNGC	8 cut(s)	224, 287, 852, 1081, 1464, 1868, 2781, 3041
Sau96I	GGNCC	4 cut(s)	275, 775, 871, 1074
ScaI	AGTACT	1 cut(s)	2686
SchI	GAGTC	7 cut(s)	50, 321, 389, 1514, 2318, 2887, 2947
ScrFI	CCNGG	3 cut(s)	401, 477, 1066
SduI	GDGCHC	5 cut(s)	73, 1390, 1923, 2479, 2533
SfaNI	GCATC	9 cut(s)	159, 838, 1383, 1513, 1551, 1853, 2068, 2238, 2530
SfcI	CTRYAG	3 cut(s)	1309, 2766, 2832
SinI	GGWCC	1 cut(s)	275
SmiMI	CAYNNNNRTG	3 cut(s)	799, 2752, 2804
SmlI	CTYRAG	2 cut(s)	1472, 1822
SmoI	CTYRAG	2 cut(s)	1472, 1822
SseBI	AGGCCT	1 cut(s)	26
SsiI	CCGC	2 cut(s)	1526, 3040
SspI	AATATT	2 cut(s)	543, 1995
SspMI	CTAG	9 cut(s)	173, 177, 183, 270, 1113, 1259, 1914, 2732, 3081
SstI	GAGCTC	2 cut(s)	1390, 2479
StuI	AGGCCT	1 cut(s)	26
StyD4I	CCNGG	3 cut(s)	399, 475, 1064
StyI	CCWWGG	2 cut(s)	2148, 2805
TaaI	ACNGT	9 cut(s)	691, 1107, 1354, 1571, 1622, 1888, 2754, 2924, 3130
TaiI	ACGT	3 cut(s)	967, 2174, 2415
TaqI	TCGA	6 cut(s)	325, 499, 1027, 1205, 2064, 2916
TatI	WGTACW	5 cut(s)	42, 1089, 1487, 2293, 2684
TauI	GCSGC	1 cut(s)	3043
TfiI	GAWTC	9 cut(s)	360, 463, 1024, 1314, 2066, 2395, 2671, 2714, 3092
TseFI	GTSAC	5 cut(s)	199, 1016, 1120, 1412, 1814
TseI	GCWGC	7 cut(s)	223, 286, 851, 1080, 1463, 1867, 2780
Tsp45I	GTSAC	5 cut(s)	199, 1016, 1120, 1412, 1814
TspDTI	ATGAA	9 cut(s)	401, 476, 681, 1186, 1338, 1442, 1718, 1987, 2269
TspGWI	ACGGA	2 cut(s)	1394, 2591
Vha464I	CTTAAG	1 cut(s)	1472
VpaK11BI	GGWCC	1 cut(s)	275
VspI	ATTAAT	2 cut(s)	1557, 2114
XagI	CCTNNNNNAGG	1 cut(s)	474
XapI	RAATTY	4 cut(s)	680, 1169, 1892, 2276
XbaI	TCTAGA	2 cut(s)	1112, 2731
XceI	RCATGY	1 cut(s)	2212
XmiI	GTMKAC	1 cut(s)	325
XmnI	GAANNNNTTC	1 cut(s)	1275
XspI	CTAG	9 cut(s)	173, 177, 183, 270, 1113, 1259, 1914, 2732, 3081
ZrmI	AGTACT	1 cut(s)	2686
Zsp2I	ATGCAT	3 cut(s)	1683, 2113, 2697

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.