Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr7

Orthogroup ID

OG0002358

Physical Location & Seq

Genomic Coordinates Forward (+)

10765744 .. 10782277

Gene Structure 16534 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom07g10620.21

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3159 bp

ATGGAGGGTTTAAGGCAACTGGAGGCGTTGTGTGAGAGGTTGTACAATTCGCAGGACTCGGTCGAAAGGGCTCATGCCGAGAACACTCTCAAATGCTTTTCGGTGAACATAGAATACATTTCGCAGTGCCAGTACATTCTCGACAATGCCATGACTCCCTACGCGTTGATGCTGGCTAGTTCTAGCCTGTTGAAGCAAGTCACTGAGCAAAAACTTGCTCTGCAGCTTCGTCTCGACATCCGGAATTACCTTATTAACTATTTGGCCACTCGAGGACGCGAGTTGCAGCCATTCGTGACTGCCTCTTTAGTCCTACTCTTATGTCGACTCACCAAGTTTGGGTGGTTTGATGATGATCGATTCCGGGATGTGGTGAAACAGTCAATGAACTTCTTGAATCAGGCAACATCTGATCACTATGCCATTGGTTTGAAGATACTAAACCAACTTGTGTCTGAGATGAGTCAGCTTAATCCTGGGTTGCCTTCAACGCATCATCGGAGGGTTGCGTGCTCCTTCAGGGATGAGTCTCTCTTTCAAATATTCCAAATATCCTTGACTTCATTGCGTCAACTGGAAAGTAATGTTGCAAATCAATTGCAAGAGTTGGCTCTTTCGCTTTCACTGAAATGCCTATCTTTTGATTTTGTTGGGACCTCACTTGATGAAAGTTCTGAAGAATTTGGTACTGTTCAGATTCCATCGGGTTGGAAGTCAACATTGGAGGATCCTGCAACACTTCAAGTCTTCTTTGATTACTATGCCAATACAAAGCCCCCCCTTTCAAAGGAGGCACTGGAGTGCTTGGTGCGACTAGCTTCTGTTAGACGTTCTTTGTTTACGAGTGATCCTACCCGTTCAAAGTTTCTGTCTCATTTAATCACAGGAACCAAAGAAATCCTACAAACTGGGCAAGGTCTTGCTGATCATGATAATTACCATGAGTATTGTCGTCTTCTTGGACGATTCCGAGTGAATTATCAGTTGTCAGAGCTTGTGACTGTGGAAGGCTATAGTGACTGGATACGTTTAGTAGCAGAATTCACGTTAAAGTCTTTGCACTCCTGGAAGTGGGCCAGCAGCAGTGTATACTACCTTTTAGGACTTTGGTCTAGATTGGTGACATCTGTACCATACTTGAAAGGTGATGCACCCAGCATGCTCGATGAATTTGTACCTAAGATTACTGAAGGTTTCATCACATCAAGATTTAACTCCGTTCAGGATGGTTCGCTTGATGATCTTTCTGAAAACCCATTAGACAACGTTGAACTTCTTCAAGATCAGTTGGATTGTTTTACATACCTCTGTAGATTCCAGTACGAAAGCAGTAGTTTGTATATAATAAGCATAGTGGAGCCTCTTTTGCAAGTCTACACGGAAAGAGCTCGAGTTCAGACCAGTGATACCAGTGACCTCTCTATTATTGAAGCAAAACTTGCTTGGATTGTTCACATAGTTGCTGCAATTCTCAAGATAAAACAATGTACTGGGTGCAGTACTGAATCACAAGAAGTACTTGATGCAGAACTTTCAGCGCGCATCTTGCAATTAATAAATGTCACTGACAGTGGGGTACAGTGCCAGAGATATGGTGAAACAAGCAAGCAAAGACTTGATCGTGCAATTCTTACCTTTTTTCAACATTTTCGGAAGTCATATGTGGGTGATCAGGCCATGCATTCTTCGAGGCAGTTATATGCCCGCCTTTCTGAGCTTCTTGGACTCCATGATCATCTTTTAATGTTAAATGTCATTGTTGGCAAGATTGCTACAAACCTGAAATGTTACACGGAGAACGAGGAGGTCATTGGTCACACCCTAAGTTTGTTCTTGGAGCTGGCATCTGGATACATGAGTGGCAAGCTACTCTTGAAGTTGGATACTGTCAAATTTATACTTGCGAATCATACTAGGGAGCATTTCCCTTTTCTCGAAGAGTATAGATGTTCTCGCAGCAGAACAACTTTCTATTACATAATTGGCTGGTTAATATTCATGGAAGACAGCCCTGTCAAATTTAGATCTTCCATGGCTCCACTTTTGCAAGTTTTTGTCAATCTGGAATCAACTCCTGATTCAATGTTTCGTACTGATGCTGTAAAGTATGGATTAATTGCGTTGACGAGAGACCTTAGAGGAATTGCCATGGCCACAAATAGTCGCAGAACTTATGGCTTTCTGTTTGATTGGTTGTATCCTGCACACATGCCACTTCTTTTGAAAGGCATCTTGCACTGGTCCGATACACCAGAGGTGACCACCCCTTTGTTGAAATTCATGGCTGAGTTTGCATTGAACAAAGCCCAACGCTTGACTTTTGATTCATCTTCTCCTAATGGAATACTTCTTTTTCGAGAAGTCAGTAAACTGATTGTTGCATATGGGTCAAGAATTTTGTCTCTTCCAAATGTTGCTGATATATATGGCTTCAAATACAAGGGAATTTGGATTTCTTTAACTATTCTTACAAGGGCTCTTGCTGGAAACTATGTCAACTTTGGGGTTTTTGAGCTATATGGTGATAGAGCGCTTGCTGATGCACTTGATATTGCACTGAAGATGACATTATCAATTCCTTTGGCTGATGTATTGGCATTCCGGAAGTTGTCAAAGGCCTATTTTGCATTCTTGGAGGTTTTATTCAACAGCCATATAGTTTATATACTGAATCTGGATACCAGTACTTTTCTGCATATAGTTGGATCCCTTGAATCTGGAATTAAAGGTCTAGATACGGGTATTGCATCACAGTCTGCATCTGCGGTTGAAAATTTGGCTGCTTTCTACTTCAACAACATAACCATGGGTGAGGCACCCACATCACCTACTGCGGTCAATCTTGCTCGTCACATTTCAGACTGCCCCAACTTGTTTCCAGAAGTACTGAAGACACTGTTTGAGATTGTTTTATTCGAGGAAAGTAACAACCAGTGGAATTTTAGCAGACCAATGCTAAGCTTGATACTTATTAATGAGCAGATATTCTCCGATTTGAAAGTTCATATCTTGGCTTCACAGCAAGCGGATCAACATCAACGGCTTTCCGAGAGTTTTGACAAGCTTATGGTGGATGTTACTAGAAGCTTGGATACAAAGAACAGAGACAAGTTCACCCAAAACTTGACAGTATTCAGGCGTGATTTTCGCTTGAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005049 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005643 GO:0005737 GO:0006611 GO:0006810 GO:0006886 GO:0006913 GO:0008104 GO:0008150 GO:0008536 GO:0012505 GO:0015031 GO:0015833 GO:0017016 GO:0019899 GO:0031267 GO:0031967 GO:0031975 GO:0032991 GO:0033036 GO:0034613 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045184 GO:0046907 GO:0051020 GO:0051168 GO:0051169 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0070727 GO:0071702 GO:0071705 GO:0140104 GO:0140142

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

IBN_N

Protein Analysis

1053

Amino Acids

119.73

Weight (kDa)

6.07

Isoelectric Point (pI)

41.54

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002358)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G06120 AT5G06120 AT5G06120 AT5G06120 AT5G06120 AT5G06120 AT5G06120 AT5G06120 AT5G06120 AT5G06120
fragaria_vesca	FvH4_7g04530 FvH4_7g04530 FvH4_7g04530 FvH4_7g04530 FvH4_7g04530 FvH4_7g04530 FvH4_7g04530 FvH4_7g04530 FvH4_7g04530
malus_domestica	MD02G1207800.v1.1 MD07G1118000.v1.1
prunus_persica	Prupe.2G050900_v2.0.a1 Prupe.2G050900_v2.0.a1 Prupe.2G050900_v2.0.a1 Prupe.2G050900_v2.0.a1 Prupe.2G051400_v2.0.a1
pyrus_communis	pycom02g17010 pycom07g10620
rosa_chinensis	RchiOBHm_Chr1g0329811
rosa_laevigata	RLG00000029862
rosa_multiflora	Rmu_co8519431.1_g000001 Rmu_sc0003459.1_g000016
rosa_roxburghii	Rroxscaffold_4G00320670
rosa_rugosa	Rorug01G0083100 Rorug01G0083200 Rorug01G0083300 Rorug01G0083400
rosa_samantha	Rh1AG101400 Rh1BG080600 Rh1CG097100 Rh1DG104700
rosa_wichuraiana	Rw1G008010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	2012
AccB1I	GGYRCC	1 cut(s)	2815
AccI	GTMKAC	3 cut(s)	325, 1089, 1374
AccII	CGCG	3 cut(s)	164, 279, 1540
AccIII	TCCGGA	2 cut(s)	240, 2601
AciI	CCGC	4 cut(s)	1705, 2765, 2834, 3026
AclI	AACGTT	1 cut(s)	1266
AclWI	GGATC	6 cut(s)	722, 735, 842, 2700, 2713, 3036
AcoI	YGGCCR	2 cut(s)	264, 2151
AcuI	CTGAAG	5 cut(s)	502, 696, 1209, 2579, 2909
AfeI	AGCGCT	1 cut(s)	2532
AfiI	CCNNNNNNNGG	4 cut(s)	339, 370, 787, 1071
AflIII	ACRYGT	1 cut(s)	162
AjnI	CCWGG	2 cut(s)	475, 1064
AjuI	GAANNNNNNNTTGG	2 cut(s)	704, 736
AleI	CACNNNNGTG	1 cut(s)	799
Alw21I	GWGCWC	2 cut(s)	515, 1390
Alw26I	GTCTC	6 cut(s)	236, 534, 876, 2124, 2406, 3099
AlwI	GGATC	6 cut(s)	722, 735, 842, 2700, 2713, 3036
Ama87I	CYCGRG	2 cut(s)	270, 1389
Aor13HI	TCCGGA	2 cut(s)	240, 2601
Aor51HI	AGCGCT	1 cut(s)	2532
AoxI	GGCC	5 cut(s)	264, 1074, 1674, 2151, 2616
ApeKI	GCWGC	6 cut(s)	223, 286, 1080, 1463, 1956, 2780
ArsI	GACNNNNNNTTYG	4 cut(s)	854, 886, 2251, 2283
AseI	ATTAAT	3 cut(s)	1553, 2114, 2973
Asp700I	GAANNNNTTC	1 cut(s)	1275
AspLEI	GCGC	3 cut(s)	1540, 1542, 2533
AspS9I	GGNCC	3 cut(s)	654, 1074, 2241
AsuC2I	CCSGG	1 cut(s)	365
AvaI	CYCGRG	2 cut(s)	270, 1389
AvaII	GGWCC	2 cut(s)	654, 2241
BaeI	ACNNNNGTAYC	4 cut(s)	1113, 1146, 1843, 1876
BalI	TGGCCA	2 cut(s)	266, 2153
BamHI	GGATCC	2 cut(s)	727, 2705
BanI	GGYRCC	1 cut(s)	2815
BanII	GRGCYC	3 cut(s)	73, 1390, 2479
BarI	GAAGNNNNNNTAC	2 cut(s)	3076, 3108
BbsI	GAAGAC	4 cut(s)	739, 947, 2010, 2897
Bbv12I	GWGCWC	2 cut(s)	515, 1390
BbvI	GCAGC	6 cut(s)	235, 298, 1092, 1450, 1968, 2767
BccI	CCATC	2 cut(s)	709, 1220
BceAI	ACGGC	1 cut(s)	3056
BciT130I	CCWGG	2 cut(s)	477, 1066
BciVI	GTATCC	6 cut(s)	1017, 1844, 1876, 2208, 2671, 3085
BclI	TGATCA	4 cut(s)	412, 925, 1669, 1732
BcnI	CCSGG	1 cut(s)	365
BcoDI	GTCTC	6 cut(s)	236, 534, 876, 2124, 2406, 3099
BfaI	CTAG	7 cut(s)	177, 183, 815, 1113, 1914, 2732, 3081
BfmI	CTRYAG	3 cut(s)	221, 1012, 1309
BfoI	RGCGCY	1 cut(s)	2534
BfuI	GTATCC	6 cut(s)	1017, 1844, 1876, 2208, 2671, 3085
BglII	AGATCT	1 cut(s)	2024
BisI	GCNGC	6 cut(s)	224, 287, 1081, 1464, 1957, 2781
BlpI	GCTNAGC	1 cut(s)	2957
BlsI	GCNGC	6 cut(s)	225, 288, 1082, 1465, 1958, 2782
BmcAI	AGTACT	4 cut(s)	1501, 1518, 2686, 2886
Bme1390I	CCNGG	3 cut(s)	365, 477, 1066
Bme18I	GGWCC	2 cut(s)	654, 2241
BmeT110I	CYCGRG	2 cut(s)	270, 1389
BmgT120I	GGNCC	3 cut(s)	654, 1074, 2241
BmiI	GGNNCC	7 cut(s)	655, 729, 889, 1359, 2037, 2707, 2817
BmrFI	CCNGG	3 cut(s)	365, 477, 1066
BmrI	ACTGGG	2 cut(s)	918, 1500
BmuI	ACTGGG	2 cut(s)	918, 1500
BoxI	GACNNNNGTC	1 cut(s)	1108
BpiI	GAAGAC	4 cut(s)	739, 947, 2010, 2897
BpmI	CTGGAG	2 cut(s)	41, 818
Bpu1102I	GCTNAGC	1 cut(s)	2957
BpuEI	CTTGAG	1 cut(s)	1457
BpuMI	CCSGG	1 cut(s)	365
Bsa29I	ATCGAT	1 cut(s)	358
BsaBI	GATNNNNATC	2 cut(s)	354, 3033
BsaI	GGTCTC	1 cut(s)	2124
BsaJI	CCNNGG	4 cut(s)	476, 2031, 2148, 2805
BsaWI	WCCGGW	2 cut(s)	240, 2601
BsaXI	ACNNNNNCTCC	2 cut(s)	14, 44
Bsc4I	CCNNNNNNNGG	4 cut(s)	339, 370, 787, 1071
Bse3DI	GCAATG	1 cut(s)	563
Bse8I	GATNNNNATC	2 cut(s)	354, 3033
BseAI	TCCGGA	2 cut(s)	240, 2601
BseBI	CCWGG	2 cut(s)	477, 1066
BseCI	ATCGAT	1 cut(s)	358
BseDI	CCNNGG	4 cut(s)	476, 2031, 2148, 2805
BseGI	GGATG	5 cut(s)	237, 373, 529, 1231, 3079
BseJI	GATNNNNATC	2 cut(s)	354, 3033
BseLI	CCNNNNNNNGG	4 cut(s)	339, 370, 787, 1071
BseMI	GCAATG	1 cut(s)	563
BseMII	CTCAG	4 cut(s)	195, 447, 1704, 2277
BsePI	GCGCGC	1 cut(s)	1538
BseRI	GAGGAG	1 cut(s)	1817
BseXI	GCAGC	6 cut(s)	235, 298, 1092, 1450, 1968, 2767
BseYI	CCCAGC	1 cut(s)	1154
BsgI	GTGCAG	2 cut(s)	1516, 2187
Bsh1236I	CGCG	3 cut(s)	164, 279, 1540
Bsh1285I	CGRYCG	1 cut(s)	63
BshFI	GGCC	5 cut(s)	266, 1076, 1676, 2153, 2618
BshNI	GGYRCC	1 cut(s)	2815
BshVI	ATCGAT	1 cut(s)	358
BsiEI	CGRYCG	1 cut(s)	63
BsiHKAI	GWGCWC	2 cut(s)	515, 1390
BsiHKCI	CYCGRG	2 cut(s)	270, 1389
BsiSI	CCGG	3 cut(s)	241, 364, 2602
BslFI	GGGAC	1 cut(s)	667
BslI	CCNNNNNNNGG	4 cut(s)	339, 370, 787, 1071
BsmAI	GTCTC	6 cut(s)	236, 534, 876, 2124, 2406, 3099
BsmBI	CGTCTC	1 cut(s)	236
BsmFI	GGGAC	1 cut(s)	667
BsmI	GAATGC	3 cut(s)	1681, 2597, 2627
BsnI	GGCC	5 cut(s)	266, 1076, 1676, 2153, 2618
Bso31I	GGTCTC	1 cut(s)	2124
BsoBI	CYCGRG	2 cut(s)	270, 1389
Bsp1286I	GDGCHC	4 cut(s)	73, 515, 1390, 2479
Bsp13I	TCCGGA	2 cut(s)	240, 2601
Bsp1407I	TGTACA	1 cut(s)	42
Bsp1720I	GCTNAGC	1 cut(s)	2957
Bsp19I	CCATGG	3 cut(s)	2031, 2148, 2805
BspACI	CCGC	4 cut(s)	1705, 2765, 2834, 3026
BspANI	GGCC	5 cut(s)	266, 1076, 1676, 2153, 2618
BspCNI	CTCAG	4 cut(s)	196, 448, 1705, 2278
BspDI	ATCGAT	1 cut(s)	358
BspEI	TCCGGA	2 cut(s)	240, 2601
BspFNI	CGCG	3 cut(s)	164, 279, 1540
BspHI	TCATGA	1 cut(s)	928
BspLI	GGNNCC	7 cut(s)	655, 729, 889, 1359, 2037, 2707, 2817
BspMAI	CTGCAG	1 cut(s)	225
BspPI	GGATC	6 cut(s)	722, 735, 842, 2700, 2713, 3036
BspT107I	GGYRCC	1 cut(s)	2815
BspTNI	GGTCTC	1 cut(s)	2124
BsrDI	GCAATG	1 cut(s)	563
BsrGI	TGTACA	1 cut(s)	42
BssECI	CCNNGG	4 cut(s)	476, 2031, 2148, 2805
BssHII	GCGCGC	1 cut(s)	1538
BssNAI	GTATAC	1 cut(s)	1090
BssT1I	CCWWGG	3 cut(s)	2031, 2148, 2805
Bst1107I	GTATAC	1 cut(s)	1090
Bst2UI	CCWGG	2 cut(s)	477, 1066
Bst4CI	ACNGT	9 cut(s)	381, 691, 1003, 1571, 1581, 1888, 2754, 2898, 3130
Bst6I	CTCTTC	2 cut(s)	1932, 2409
BstAPI	GCANNNNNTGC	1 cut(s)	1439
BstAUI	TGTACA	1 cut(s)	42
BstDEI	CTNAG	8 cut(s)	204, 456, 1179, 1713, 1823, 2135, 2286, 2957
BstDSI	CCRYGG	3 cut(s)	2031, 2148, 2805
BstEII	GGTNACC	1 cut(s)	2257
BstENI	CCTNNNNNAGG	1 cut(s)	785
BstF5I	GGATG	5 cut(s)	237, 373, 529, 1231, 3079
BstFNI	CGCG	3 cut(s)	164, 279, 1540
BstH2I	RGCGCY	1 cut(s)	2534
BstHHI	GCGC	3 cut(s)	1540, 1542, 2533
BstMAI	GTCTC	6 cut(s)	236, 534, 876, 2124, 2406, 3099
BstMCI	CGRYCG	1 cut(s)	63
BstMWI	GCNNNNNNNGC	6 cut(s)	490, 1366, 1439, 1546, 2291, 2624
BstNI	CCWGG	2 cut(s)	477, 1066
BstNSI	RCATGY	2 cut(s)	1162, 2212
BstPAI	GACNNNNGTC	1 cut(s)	1108
BstPI	GGTNACC	1 cut(s)	2257
BstSCI	CCNGG	3 cut(s)	363, 475, 1064
BstSFI	CTRYAG	3 cut(s)	221, 1012, 1309
BstUI	CGCG	3 cut(s)	164, 279, 1540
BstV1I	GCAGC	6 cut(s)	235, 298, 1092, 1450, 1968, 2767
BstV2I	GAAGAC	4 cut(s)	739, 947, 2010, 2897
BstX2I	RGATCY	3 cut(s)	727, 2024, 2705
BstXI	CCANNNNNNTGG	2 cut(s)	708, 1592
BstYI	RGATCY	3 cut(s)	727, 2024, 2705
BstZ17I	GTATAC	1 cut(s)	1090
Bsu15I	ATCGAT	1 cut(s)	358
BsuI	GTATCC	6 cut(s)	1017, 1844, 1876, 2208, 2671, 3085
BsuRI	GGCC	5 cut(s)	266, 1076, 1676, 2153, 2618
BsuTUI	ATCGAT	1 cut(s)	358
BtgI	CCRYGG	3 cut(s)	2031, 2148, 2805
BtsCI	GGATG	5 cut(s)	237, 373, 529, 1231, 3079
BtsI	GCAGTG	2 cut(s)	131, 1090
CciI	TCATGA	1 cut(s)	928
CfoI	GCGC	3 cut(s)	1540, 1542, 2533
Cfr13I	GGNCC	3 cut(s)	654, 1074, 2241
ClaI	ATCGAT	1 cut(s)	358
CseI	GACGC	2 cut(s)	285, 557
CspCI	CAANNNNNGTGG	2 cut(s)	2202, 2237
DdeI	CTNAG	8 cut(s)	204, 456, 1179, 1713, 1823, 2135, 2286, 2957
DrdI	GACNNNNNNGTC	1 cut(s)	2012
DseDI	GACNNNNNNGTC	1 cut(s)	2012
EaeI	YGGCCR	2 cut(s)	264, 2151
Eam1104I	CTCTTC	2 cut(s)	1932, 2409
EarI	CTCTTC	2 cut(s)	1932, 2409
Ecl136II	GAGCTC	1 cut(s)	1388
Eco130I	CCWWGG	3 cut(s)	2031, 2148, 2805
Eco147I	AGGCCT	1 cut(s)	2618
Eco24I	GRGCYC	3 cut(s)	73, 1390, 2479
Eco31I	GGTCTC	1 cut(s)	2124
Eco47I	GGWCC	2 cut(s)	654, 2241
Eco47III	AGCGCT	1 cut(s)	2532
Eco53kI	GAGCTC	1 cut(s)	1388
Eco57I	CTGAAG	5 cut(s)	502, 696, 1209, 2579, 2909
Eco88I	CYCGRG	2 cut(s)	270, 1389
Eco91I	GGTNACC	1 cut(s)	2257
EcoICRI	GAGCTC	1 cut(s)	1388
EcoNI	CCTNNNNNAGG	1 cut(s)	785
EcoO109I	RGGNCCY	1 cut(s)	654
EcoO65I	GGTNACC	1 cut(s)	2257
EcoRI	GAATTC	1 cut(s)	1040
EcoRII	CCWGG	2 cut(s)	475, 1064
EcoT14I	CCWWGG	3 cut(s)	2031, 2148, 2805
EcoT22I	ATGCAT	1 cut(s)	1683
EcoT38I	GRGCYC	3 cut(s)	73, 1390, 2479
ErhI	CCWWGG	3 cut(s)	2031, 2148, 2805
Esp3I	CGTCTC	1 cut(s)	236
FalI	AAGNNNNNCTT	6 cut(s)	1422, 1454, 1503, 1535, 1856, 1888
FaqI	GGGAC	1 cut(s)	667
FauI	CCCGC	1 cut(s)	1712
FauNDI	CATATG	2 cut(s)	1660, 2383
FbaI	TGATCA	4 cut(s)	412, 925, 1669, 1732
FblI	GTMKAC	3 cut(s)	325, 1089, 1374
Fnu4HI	GCNGC	6 cut(s)	224, 287, 1081, 1464, 1957, 2781
FokI	GGATG	5 cut(s)	224, 380, 536, 1238, 3086
FriOI	GRGCYC	3 cut(s)	73, 1390, 2479
Fsp4HI	GCNGC	6 cut(s)	224, 287, 1081, 1464, 1957, 2781
FspBI	CTAG	7 cut(s)	177, 183, 815, 1113, 1914, 2732, 3081
GlaI	GCGC	3 cut(s)	1539, 1541, 2532
GluI	GCNGC	6 cut(s)	224, 287, 1081, 1464, 1957, 2781
GsaI	CCCAGC	1 cut(s)	1158
GsuI	CTGGAG	2 cut(s)	41, 818
HaeII	RGCGCY	1 cut(s)	2534
HaeIII	GGCC	5 cut(s)	266, 1076, 1676, 2153, 2618
HapII	CCGG	3 cut(s)	241, 364, 2602
HgaI	GACGC	2 cut(s)	285, 557
HhaI	GCGC	3 cut(s)	1540, 1542, 2533
Hin6I	GCGC	3 cut(s)	1538, 1540, 2531
HinP1I	GCGC	3 cut(s)	1538, 1540, 2531
HincII	GTYRAC	5 cut(s)	326, 572, 717, 2124, 2497
HindII	GTYRAC	5 cut(s)	326, 572, 717, 2124, 2497
HindIII	AAGCTT	3 cut(s)	2959, 3062, 3085
HpaII	CCGG	3 cut(s)	241, 364, 2602
HpyAV	CCTTC	4 cut(s)	495, 526, 1001, 1184
HpyCH4III	ACNGT	9 cut(s)	381, 691, 1003, 1571, 1581, 1888, 2754, 2898, 3130
HpyCH4IV	ACGT	4 cut(s)	829, 1027, 1046, 1266
HpyF10VI	GCNNNNNNNGC	6 cut(s)	490, 1366, 1439, 1546, 2291, 2624
HpyF3I	CTNAG	8 cut(s)	204, 456, 1179, 1713, 1823, 2135, 2286, 2957
HpySE526I	ACGT	4 cut(s)	829, 1027, 1046, 1266
HspAI	GCGC	3 cut(s)	1538, 1540, 2531
Kpn2I	TCCGGA	2 cut(s)	240, 2601
Ksp22I	TGATCA	4 cut(s)	412, 925, 1669, 1732
LmnI	GCTCC	5 cut(s)	518, 1357, 1837, 1918, 2041
Lsp1109I	GCAGC	6 cut(s)	235, 298, 1092, 1450, 1968, 2767
MaeI	CTAG	7 cut(s)	177, 183, 815, 1113, 1914, 2732, 3081
MaeII	ACGT	4 cut(s)	829, 1027, 1046, 1266
MfeI	CAATTG	1 cut(s)	596
MflI	RGATCY	3 cut(s)	727, 2024, 2705
MhlI	GDGCHC	4 cut(s)	73, 515, 1390, 2479
MlsI	TGGCCA	2 cut(s)	266, 2153
MluI	ACGCGT	1 cut(s)	162
MluNI	TGGCCA	2 cut(s)	266, 2153
MlyI	GAGTC	6 cut(s)	50, 148, 321, 472, 536, 1719
MmeI	TCCRAC	4 cut(s)	689, 1269, 1860, 2683
Mox20I	TGGCCA	2 cut(s)	266, 2153
Mph1103I	ATGCAT	1 cut(s)	1683
MroI	TCCGGA	2 cut(s)	240, 2601
MroXI	GAANNNNTTC	1 cut(s)	1275
MscI	TGGCCA	2 cut(s)	266, 2153
MslI	CAYNNNNRTG	3 cut(s)	628, 799, 2804
Msp20I	TGGCCA	2 cut(s)	266, 2153
MspI	CCGG	3 cut(s)	241, 364, 2602
MspR9I	CCNGG	3 cut(s)	365, 477, 1066
MunI	CAATTG	1 cut(s)	596
Mva1269I	GAATGC	3 cut(s)	1681, 2597, 2627
MvaI	CCWGG	2 cut(s)	477, 1066
MvnI	CGCG	3 cut(s)	164, 279, 1540
MwoI	GCNNNNNNNGC	6 cut(s)	490, 1366, 1439, 1546, 2291, 2624
NciI	CCSGG	1 cut(s)	365
NcoI	CCATGG	3 cut(s)	2031, 2148, 2805
NdeI	CATATG	2 cut(s)	1660, 2383
NlaIV	GGNNCC	7 cut(s)	655, 729, 889, 1359, 2037, 2707, 2817
NmeAIII	GCCGAG	1 cut(s)	103
NsiI	ATGCAT	1 cut(s)	1683
NspI	RCATGY	2 cut(s)	1162, 2212
OliI	CACNNNNGTG	1 cut(s)	799
PaeI	GCATGC	1 cut(s)	1162
PaeR7I	CTCGAG	2 cut(s)	270, 1389
PagI	TCATGA	1 cut(s)	928
PauI	GCGCGC	1 cut(s)	1538
PceI	AGGCCT	1 cut(s)	2618
PctI	GAATGC	3 cut(s)	1681, 2597, 2627
PdmI	GAANNNNTTC	1 cut(s)	1275
PflFI	GACNNNGTC	1 cut(s)	59
PfoI	TCCNGGA	2 cut(s)	363, 1064
PkrI	GCNGC	6 cut(s)	225, 288, 1082, 1465, 1958, 2782
PleI	GAGTC	6 cut(s)	50, 148, 321, 471, 535, 1719
PpsI	GAGTC	6 cut(s)	50, 148, 321, 471, 535, 1719
PpuMI	RGGWCCY	1 cut(s)	654
PshAI	GACNNNNGTC	1 cut(s)	1108
PshBI	ATTAAT	3 cut(s)	1553, 2114, 2973
Psp124BI	GAGCTC	1 cut(s)	1390
Psp1406I	AACGTT	1 cut(s)	1266
Psp5II	RGGWCCY	1 cut(s)	654
Psp6I	CCWGG	2 cut(s)	475, 1064
PspEI	GGTNACC	1 cut(s)	2257
PspFI	CCCAGC	1 cut(s)	1154
PspGI	CCWGG	2 cut(s)	475, 1064
PspN4I	GGNNCC	7 cut(s)	655, 729, 889, 1359, 2037, 2707, 2817
PspPI	GGNCC	3 cut(s)	654, 1074, 2241
PspPPI	RGGWCCY	1 cut(s)	654
PspXI	VCTCGAGB	2 cut(s)	270, 1389
PsrI	GAACNNNNNNTAC	2 cut(s)	98, 130
PstI	CTGCAG	1 cut(s)	225
PsuI	RGATCY	3 cut(s)	727, 2024, 2705
PsyI	GACNNNGTC	1 cut(s)	59
PteI	GCGCGC	1 cut(s)	1538
RseI	CAYNNNNRTG	3 cut(s)	628, 799, 2804
SacI	GAGCTC	1 cut(s)	1390
SalI	GTCGAC	1 cut(s)	324
SatI	GCNGC	6 cut(s)	224, 287, 1081, 1464, 1957, 2781
Sau96I	GGNCC	3 cut(s)	654, 1074, 2241
ScaI	AGTACT	4 cut(s)	1501, 1518, 2686, 2886
SchI	GAGTC	6 cut(s)	50, 148, 321, 472, 536, 1719
ScrFI	CCNGG	3 cut(s)	365, 477, 1066
SduI	GDGCHC	4 cut(s)	73, 515, 1390, 2479
SfcI	CTRYAG	3 cut(s)	221, 1012, 1309
Sfr274I	CTCGAG	2 cut(s)	270, 1389
SinI	GGWCC	2 cut(s)	654, 2241
SlaI	CTCGAG	2 cut(s)	270, 1389
SmiMI	CAYNNNNRTG	3 cut(s)	628, 799, 2804
SmlI	CTYRAG	3 cut(s)	270, 1389, 1472
SmoI	CTYRAG	3 cut(s)	270, 1389, 1472
SphI	GCATGC	1 cut(s)	1162
SseBI	AGGCCT	1 cut(s)	2618
SsiI	CCGC	4 cut(s)	1705, 2765, 2834, 3026
SspI	AATATT	2 cut(s)	543, 1995
SspMI	CTAG	7 cut(s)	177, 183, 815, 1113, 1914, 2732, 3081
SstI	GAGCTC	1 cut(s)	1390
StuI	AGGCCT	1 cut(s)	2618
StyD4I	CCNGG	3 cut(s)	363, 475, 1064
StyI	CCWWGG	3 cut(s)	2031, 2148, 2805
TaaI	ACNGT	9 cut(s)	381, 691, 1003, 1571, 1581, 1888, 2754, 2898, 3130
TaiI	ACGT	4 cut(s)	832, 1030, 1049, 1269
TaqII	GACCGA	1 cut(s)	49
TatI	WGTACW	7 cut(s)	42, 132, 1487, 1499, 1516, 2684, 2884
TseI	GCWGC	6 cut(s)	223, 286, 1080, 1463, 1956, 2780
TspDTI	ATGAA	9 cut(s)	401, 552, 681, 1182, 1186, 1987, 2269, 2316, 2993
TspGWI	ACGGA	3 cut(s)	1207, 1394, 1808
Tth111I	GACNNNGTC	1 cut(s)	59
VpaK11BI	GGWCC	2 cut(s)	654, 2241
VspI	ATTAAT	3 cut(s)	1553, 2114, 2973
XagI	CCTNNNNNAGG	1 cut(s)	785
XbaI	TCTAGA	2 cut(s)	1112, 2731
XceI	RCATGY	2 cut(s)	1162, 2212
XhoI	CTCGAG	2 cut(s)	270, 1389
XmiI	GTMKAC	3 cut(s)	325, 1089, 1374
XmnI	GAANNNNTTC	1 cut(s)	1275
XspI	CTAG	7 cut(s)	177, 183, 815, 1113, 1914, 2732, 3081
ZrmI	AGTACT	4 cut(s)	1501, 1518, 2686, 2886
Zsp2I	ATGCAT	1 cut(s)	1683

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.