Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0002358

Physical Location & Seq

Genomic Coordinates Forward (+)

13612482 .. 13615227

Gene Structure 2746 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0083400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1962 bp

ATGAATGTTGCAGCAAGTATACCATCCTTTCCAGCAAGATTCATACTAATCCTTCTAGTAGTTCTTGGTTTGTGCACTGTAGTTTCCCACGCTAAGGGTGATCATCACCGTGAGCCTTCTTCCTGCGGCCACATCCGAAATATAAGTTACCCTTTCCGACTCATTGATGATCCAAAGAAGTGCGGTAAATCAAGGTATAACCTGTCTTGTGAGAACAATGTCACTGTATTACACTTGTATTCAGGAAAATACTATGTGCTTGCCATCAATTATGGAAACTACACAATCCGAGTTGTGGATGCCAATATTCGTAAGGATAACTGCTCTTCAATCCCTCGTAATTCGTTGGCCAGCTATAACTTCAGTGATGAGGATCCATACAGCATTGATATATGGAAAGGTGCCAAGTGGGGGAACGCGGATAGGTTTGAACTGTCAAAGCCTATAATCTTCATGACCTGTGAAACTCAGCCGGTGAATTCATCTCTCTATGTGGATACTGCTCCTTGCATTAATGCAACGAGTGGGCATTCTTTTGTTATCGCTGGAGACTTAGATGCCTCGGATTTGTGGGATTCGTGTCGCATAGAGCTGATGGTCTTGACATCATGGTCGATCGGGGCAAAGGACATGAACAGCTACTACATGGACATCCACAAGGAGCTGCTCTATGGTTTTGAACTTTCATTGTTGGAGAGCTACCGTAGATCAGGTTATTATTTTTATTGGCCATGGGAGCCCTGCTATCTCGACATTGATACCAACAGAGTTTATTGTCCAGGCCACGCTGGTATTGTGAAGTATCTAATAGAATCAGCTTCTAAGATTCTAACGGCAGTGGCTATGTGGACTGGGACAAAAGCTGTACTAGGAATTCCTTGTGTGGTTGTGTTTTTAATCTTGAAATTGAAAAGACGACACTTATCGATGTACAGCATTATTGAAGAATTCTTACAAGGCCAGAACAACCTCATGCCAATAAGGTACTCCTACTCCAATATCAAGAAAATGACCAAAGGATTTAAGGATAAATTAGGGGAGGGAGGTTACGGCTCTGTGTATAAAGCAAAGCTTCGGAGTGGTCGCCTTATTGCTGTTAAGATGTTGGGAAAGTCCAAAGCTAATGGGCAAGATTTTATGAATGAAGTTGCTACCATTGGAAGAATTCATCATGTAAATGTGGTGCAACTAATTGGCTATTGTGCTGAGGGATCAAAGCGTGCTCTTGTATATGAGTACATGTCAAATGGGTCTCTTGATAAACACATTTTTTCTAAAGAAGGATTCATTTCCTTAAGTTGCAAGGAAGCATTTGAAATTTCACTAGGAGTGGCCCGTGGCATTGATTATCTGCATCAAGGATGTGGCATGAAAATATTGCATTTTGATATCAAGCCACACAACATTCTTCTTGACGAGAATTTTGTTCCGAAGGTTTCAGACTTTGGTCTCGCAAGATTATGCCCCTTAGATGACAGCAGTTTAACTTTGACCGCAGCAAGAGGAACCATTGGATACATAGCTCCGGAATTGTTTTACAAGAATATTGGAGGTGTGTCAAACAAAGCTGATATCTATAGTTTTGGAATGTTGTTGATGGAAATTGCAGGGAAAAGAAGGAATTTAAATGCACTTGCAGCAAATACGAGCCAAATTTACTTTCCTTCTTGGGTGTATGACCAGTTCAGTGAAGGAAAGGAGATGGAAATCGAAGATGCCACTGATGAGGAAAGGAAAATGACAAAGAAAATGCTCATAGTCGCATTGTGGTGTATACAATTGAAGCCTGGTGATCGTCCTAATTCGATGAACAAAGTTGTAGAGATGCTTGAAGGAGAAGTTGAATTCATTCAAATGCCTCCAAAGCCTTTCTTATATCCACAAGACACGCCAGTAGTGGATGATGAAGATGGTTCGGAAATAACTTTGTCATCATCAATGCCACCGAAAACTGAAGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000408 GO:0002949 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006396 GO:0006399 GO:0006400 GO:0006725 GO:0006807 GO:0008033 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0010467 GO:0016070 GO:0032991 GO:0034470 GO:0034641 GO:0034660 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0070525 GO:0071704 GO:0090304 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Peptidase_M22

Protein Analysis

653

Amino Acids

73.43

Weight (kDa)

6.93

Isoelectric Point (pI)

42.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GUB_WAK_bind	PF13947	40 - 100	2.6e-18	Wall-associated receptor kinase galacturonan-binding
PK_Tyr_Ser-Thr	PF07714	341 - 607	7e-42	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	342 - 603	2.6e-44	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002358)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G06120 AT5G06120 AT5G06120 AT5G06120 AT5G06120 AT5G06120 AT5G06120 AT5G06120 AT5G06120 AT5G06120
fragaria_vesca	FvH4_7g04530 FvH4_7g04530 FvH4_7g04530 FvH4_7g04530 FvH4_7g04530 FvH4_7g04530 FvH4_7g04530 FvH4_7g04530 FvH4_7g04530
malus_domestica	MD02G1207800.v1.1 MD07G1118000.v1.1
prunus_persica	Prupe.2G050900_v2.0.a1 Prupe.2G050900_v2.0.a1 Prupe.2G050900_v2.0.a1 Prupe.2G050900_v2.0.a1 Prupe.2G051400_v2.0.a1
pyrus_communis	pycom02g17010 pycom07g10620
rosa_chinensis	RchiOBHm_Chr1g0329811
rosa_laevigata	RLG00000029862
rosa_multiflora	Rmu_co8519431.1_g000001 Rmu_sc0003459.1_g000016
rosa_roxburghii	Rroxscaffold_4G00320670
rosa_rugosa	Rorug01G0083100 Rorug01G0083200 Rorug01G0083300 Rorug01G0083400
rosa_samantha	Rh1AG101400 Rh1BG080600 Rh1CG097100 Rh1DG104700
rosa_wichuraiana	Rw1G008010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	610
AccB1I	GGYRCC	1 cut(s)	401
AccI	GTMKAC	2 cut(s)	19, 1774
AccII	CGCG	1 cut(s)	419
AccIII	TCCGGA	1 cut(s)	1525
AciI	CCGC	4 cut(s)	126, 183, 419, 1494
AclWI	GGATC	4 cut(s)	164, 368, 381, 1219
AcoI	YGGCCR	3 cut(s)	127, 348, 728
AcsI	RAATTY	9 cut(s)	478, 873, 947, 1164, 1317, 1420, 1621, 1653, 1844
AcuI	CTGAAG	1 cut(s)	346
AfaI	GTAC	4 cut(s)	867, 932, 986, 1238
AfiI	CCNNNNNNNGG	3 cut(s)	94, 295, 411
AflII	CTTAAG	1 cut(s)	1294
AflIII	ACRYGT	1 cut(s)	1239
AjnI	CCWGG	2 cut(s)	778, 1786
AjuI	GAANNNNNNNTTGG	2 cut(s)	1644, 1676
Alw21I	GWGCWC	2 cut(s)	77, 1225
Alw26I	GTCTC	3 cut(s)	543, 1257, 1454
Alw44I	GTGCAC	1 cut(s)	73
AlwI	GGATC	4 cut(s)	164, 368, 381, 1219
Aor13HI	TCCGGA	1 cut(s)	1525
AoxI	GGCC	6 cut(s)	127, 348, 728, 781, 958, 1332
ApaLI	GTGCAC	1 cut(s)	73
ApeKI	GCWGC	4 cut(s)	11, 664, 1496, 1637
ApoI	RAATTY	9 cut(s)	478, 873, 947, 1164, 1317, 1420, 1621, 1653, 1844
ArsI	GACNNNNNNTTYG	2 cut(s)	1406, 1438
AseI	ATTAAT	1 cut(s)	513
Asp700I	GAANNNNTTC	1 cut(s)	1848
AspS9I	GGNCC	1 cut(s)	1333
AsuHPI	GGTGA	4 cut(s)	98, 110, 487, 1802
BaeGI	GKGCMC	1 cut(s)	77
BalI	TGGCCA	2 cut(s)	350, 730
BamHI	GGATCC	1 cut(s)	373
BanI	GGYRCC	1 cut(s)	401
BanII	GRGCYC	1 cut(s)	741
BarI	GAAGNNNNNNTAC	2 cut(s)	936, 968
Bbv12I	GWGCWC	2 cut(s)	77, 1225
BbvCI	CCTCAGC	1 cut(s)	1206
BbvI	GCAGC	4 cut(s)	23, 651, 1508, 1649
BccI	CCATC	6 cut(s)	31, 272, 589, 1591, 1696, 1904
BceAI	ACGGC	2 cut(s)	849, 1066
BciT130I	CCWGG	2 cut(s)	780, 1788
BciVI	GTATCC	2 cut(s)	490, 1508
BclI	TGATCA	1 cut(s)	100
BcoDI	GTCTC	3 cut(s)	543, 1257, 1454
BfaI	CTAG	3 cut(s)	56, 869, 1325
BfmI	CTRYAG	2 cut(s)	78, 1576
BfrI	CTTAAG	1 cut(s)	1294
BfuI	GTATCC	2 cut(s)	490, 1508
BisI	GCNGC	5 cut(s)	12, 127, 665, 1497, 1638
BlsI	GCNGC	5 cut(s)	13, 128, 666, 1498, 1639
Bme1390I	CCNGG	2 cut(s)	780, 1788
BmgT120I	GGNCC	1 cut(s)	1333
BmiI	GGNNCC	4 cut(s)	375, 403, 738, 1507
BmrFI	CCNGG	2 cut(s)	780, 1788
BmrI	ACTGGG	1 cut(s)	861
BmsI	GCATC	5 cut(s)	289, 547, 1363, 1705, 1815
BmuI	ACTGGG	1 cut(s)	861
BoxI	GACNNNNGTC	1 cut(s)	1446
BpmI	CTGGAG	1 cut(s)	567
Bpu10I	CCTNAGC	2 cut(s)	93, 1206
Bsa29I	ATCGAT	1 cut(s)	926
BsaBI	GATNNNNATC	2 cut(s)	372, 1706
BsaI	GGTCTC	2 cut(s)	1257, 1454
BsaJI	CCNNGG	3 cut(s)	561, 731, 1336
BsaWI	WCCGGW	1 cut(s)	1525
BsaXI	ACNNNNNCTCC	2 cut(s)	977, 1007
Bsc4I	CCNNNNNNNGG	3 cut(s)	94, 295, 411
Bse118I	RCCGGY	1 cut(s)	472
Bse1I	ACTGG	3 cut(s)	856, 1681, 1892
Bse8I	GATNNNNATC	2 cut(s)	372, 1706
BseAI	TCCGGA	1 cut(s)	1525
BseBI	CCWGG	2 cut(s)	780, 1788
BseCI	ATCGAT	1 cut(s)	926
BseDI	CCNNGG	3 cut(s)	561, 731, 1336
BseGI	GGATG	6 cut(s)	23, 132, 304, 651, 1367, 1906
BseJI	GATNNNNATC	2 cut(s)	372, 1706
BseLI	CCNNNNNNNGG	3 cut(s)	94, 295, 411
BseMII	CTCAG	2 cut(s)	482, 1197
BseNI	ACTGG	3 cut(s)	856, 1681, 1892
BseSI	GKGCMC	1 cut(s)	77
BseXI	GCAGC	4 cut(s)	23, 651, 1508, 1649
Bsh1236I	CGCG	1 cut(s)	419
Bsh1285I	CGRYCG	1 cut(s)	618
BshFI	GGCC	6 cut(s)	129, 350, 730, 783, 960, 1334
BshNI	GGYRCC	1 cut(s)	401
BshVI	ATCGAT	1 cut(s)	926
BsiEI	CGRYCG	1 cut(s)	618
BsiHKAI	GWGCWC	2 cut(s)	77, 1225
BsiSI	CCGG	2 cut(s)	473, 1526
BslFI	GGGAC	1 cut(s)	868
BslI	CCNNNNNNNGG	3 cut(s)	94, 295, 411
BsmAI	GTCTC	3 cut(s)	543, 1257, 1454
BsmFI	GGGAC	1 cut(s)	868
BsmI	GAATGC	1 cut(s)	529
BsnI	GGCC	6 cut(s)	129, 350, 730, 783, 960, 1334
Bso31I	GGTCTC	2 cut(s)	1257, 1454
Bsp1286I	GDGCHC	3 cut(s)	77, 741, 1225
Bsp13I	TCCGGA	1 cut(s)	1525
Bsp1407I	TGTACA	1 cut(s)	930
Bsp143I	GATC	7 cut(s)	100, 169, 373, 615, 707, 1211, 1792
Bsp19I	CCATGG	1 cut(s)	731
BspACI	CCGC	4 cut(s)	126, 183, 419, 1494
BspANI	GGCC	6 cut(s)	129, 350, 730, 783, 960, 1334
BspCNI	CTCAG	2 cut(s)	481, 1198
BspDI	ATCGAT	1 cut(s)	926
BspEI	TCCGGA	1 cut(s)	1525
BspFNI	CGCG	1 cut(s)	419
BspHI	TCATGA	1 cut(s)	453
BspLI	GGNNCC	4 cut(s)	375, 403, 738, 1507
BspPI	GGATC	4 cut(s)	164, 368, 381, 1219
BspQI	GCTCTTC	1 cut(s)	331
BspT107I	GGYRCC	1 cut(s)	401
BspTI	CTTAAG	1 cut(s)	1294
BspTNI	GGTCTC	2 cut(s)	1257, 1454
BsrFI	RCCGGY	1 cut(s)	472
BsrGI	TGTACA	1 cut(s)	930
BsrI	ACTGG	3 cut(s)	856, 1681, 1892
BssAI	RCCGGY	1 cut(s)	472
BssECI	CCNNGG	3 cut(s)	561, 731, 1336
BssMI	GATC	7 cut(s)	100, 169, 373, 615, 707, 1211, 1792
BssNAI	GTATAC	2 cut(s)	20, 1775
BssT1I	CCWWGG	1 cut(s)	731
Bst1107I	GTATAC	2 cut(s)	20, 1775
Bst2UI	CCWGG	2 cut(s)	780, 1788
Bst4CI	ACNGT	5 cut(s)	79, 110, 226, 435, 704
Bst6I	CTCTTC	1 cut(s)	331
BstAFI	CTTAAG	1 cut(s)	1294
BstAUI	TGTACA	1 cut(s)	930
BstC8I	GCNNGC	3 cut(s)	261, 352, 1221
BstDEI	CTNAG	6 cut(s)	93, 468, 553, 822, 1206, 1468
BstDSI	CCRYGG	2 cut(s)	731, 1336
BstF5I	GGATG	6 cut(s)	23, 132, 304, 651, 1367, 1906
BstFNI	CGCG	1 cut(s)	419
BstKTI	GATC	7 cut(s)	103, 172, 376, 618, 710, 1214, 1795
BstMAI	GTCTC	3 cut(s)	543, 1257, 1454
BstMBI	GATC	7 cut(s)	100, 169, 373, 615, 707, 1211, 1792
BstMCI	CGRYCG	1 cut(s)	618
BstMWI	GCNNNNNNNGC	3 cut(s)	736, 1637, 1864
BstNI	CCWGG	2 cut(s)	780, 1788
BstNSI	RCATGY	1 cut(s)	1243
BstPAI	GACNNNNGTC	1 cut(s)	1446
BstSCI	CCNGG	2 cut(s)	778, 1786
BstSFI	CTRYAG	2 cut(s)	78, 1576
BstSLI	GKGCMC	1 cut(s)	77
BstUI	CGCG	1 cut(s)	419
BstV1I	GCAGC	4 cut(s)	23, 651, 1508, 1649
BstX2I	RGATCY	1 cut(s)	373
BstYI	RGATCY	1 cut(s)	373
BstZ17I	GTATAC	2 cut(s)	20, 1775
Bsu15I	ATCGAT	1 cut(s)	926
BsuI	GTATCC	2 cut(s)	490, 1508
BsuRI	GGCC	6 cut(s)	129, 350, 730, 783, 960, 1334
BsuTUI	ATCGAT	1 cut(s)	926
BtgI	CCRYGG	2 cut(s)	731, 1336
BtsCI	GGATG	6 cut(s)	23, 132, 304, 651, 1367, 1906
BtsI	GCAGTG	1 cut(s)	843
BtsIMutI	CAGTG	6 cut(s)	75, 222, 370, 843, 1693, 1719
Cac8I	GCNNGC	3 cut(s)	261, 352, 1221
CciI	TCATGA	1 cut(s)	453
Cfr10I	RCCGGY	1 cut(s)	472
Cfr13I	GGNCC	1 cut(s)	1333
ClaI	ATCGAT	1 cut(s)	926
Csp6I	GTAC	4 cut(s)	866, 931, 985, 1237
CviAII	CATG	9 cut(s)	454, 609, 631, 646, 732, 973, 1172, 1240, 1369
CviQI	GTAC	4 cut(s)	866, 931, 985, 1237
DdeI	CTNAG	6 cut(s)	93, 468, 553, 822, 1206, 1468
DpnI	GATC	7 cut(s)	102, 171, 375, 617, 709, 1213, 1794
DpnII	GATC	7 cut(s)	100, 169, 373, 615, 707, 1211, 1792
DraI	TTTAAA	1 cut(s)	1626
DrdI	GACNNNNNNGTC	1 cut(s)	610
DseDI	GACNNNNNNGTC	1 cut(s)	610
EaeI	YGGCCR	3 cut(s)	127, 348, 728
Eam1104I	CTCTTC	1 cut(s)	331
EarI	CTCTTC	1 cut(s)	331
Eco130I	CCWWGG	1 cut(s)	731
Eco24I	GRGCYC	1 cut(s)	741
Eco31I	GGTCTC	2 cut(s)	1257, 1454
Eco32I	GATATC	2 cut(s)	1390, 1573
Eco57I	CTGAAG	1 cut(s)	346
EcoRI	GAATTC	5 cut(s)	478, 873, 947, 1164, 1844
EcoRII	CCWGG	2 cut(s)	778, 1786
EcoRV	GATATC	2 cut(s)	1390, 1573
EcoT14I	CCWWGG	1 cut(s)	731
EcoT38I	GRGCYC	1 cut(s)	741
ErhI	CCWWGG	1 cut(s)	731
FaeI	CATG	9 cut(s)	457, 612, 634, 649, 735, 976, 1175, 1243, 1372
FalI	AAGNNNNNCTT	6 cut(s)	136, 168, 1056, 1088, 1856, 1888
FaqI	GGGAC	1 cut(s)	868
FatI	CATG	9 cut(s)	453, 608, 630, 645, 731, 972, 1171, 1239, 1368
FbaI	TGATCA	1 cut(s)	100
FblI	GTMKAC	2 cut(s)	19, 1774
Fnu4HI	GCNGC	5 cut(s)	12, 127, 665, 1497, 1638
FokI	GGATG	6 cut(s)	10, 119, 311, 638, 1374, 1913
FriOI	GRGCYC	1 cut(s)	741
Fsp4HI	GCNGC	5 cut(s)	12, 127, 665, 1497, 1638
FspBI	CTAG	3 cut(s)	56, 869, 1325
GluI	GCNGC	5 cut(s)	12, 127, 665, 1497, 1638
GsuI	CTGGAG	1 cut(s)	567
HaeIII	GGCC	6 cut(s)	129, 350, 730, 783, 960, 1334
HapII	CCGG	2 cut(s)	473, 1526
Hin1II	CATG	9 cut(s)	457, 612, 634, 649, 735, 976, 1175, 1243, 1372
HindIII	AAGCTT	2 cut(s)	1070, 1956
HinfI	GANTC	6 cut(s)	39, 159, 575, 812, 826, 1284
HpaII	CCGG	2 cut(s)	473, 1526
HphI	GGTGA	4 cut(s)	98, 110, 487, 1802
Hpy166II	GTNNAC	4 cut(s)	20, 75, 849, 1775
Hpy188I	TCNGA	8 cut(s)	137, 158, 290, 565, 1077, 1431, 1441, 1918
Hpy188III	TCNNGA	9 cut(s)	243, 454, 601, 749, 901, 1003, 1256, 1412, 1526
Hpy8I	GTNNAC	4 cut(s)	20, 75, 849, 1775
HpyAV	CCTTC	8 cut(s)	62, 126, 1274, 1426, 1611, 1674, 1685, 1826
HpyCH4III	ACNGT	5 cut(s)	79, 110, 226, 435, 704
HpyF10VI	GCNNNNNNNGC	3 cut(s)	736, 1637, 1864
HpyF3I	CTNAG	6 cut(s)	93, 468, 553, 822, 1206, 1468
Hsp92II	CATG	9 cut(s)	457, 612, 634, 649, 735, 976, 1175, 1243, 1372
Kpn2I	TCCGGA	1 cut(s)	1525
Ksp22I	TGATCA	1 cut(s)	100
Kzo9I	GATC	7 cut(s)	100, 169, 373, 615, 707, 1211, 1792
LguI	GCTCTTC	1 cut(s)	331
LmnI	GCTCC	4 cut(s)	508, 661, 736, 1528
Lsp1109I	GCAGC	4 cut(s)	23, 651, 1508, 1649
LweI	GCATC	5 cut(s)	289, 547, 1363, 1705, 1815
MaeI	CTAG	3 cut(s)	56, 869, 1325
MaeIII	GTNAC	3 cut(s)	146, 220, 1046
MalI	GATC	7 cut(s)	102, 171, 375, 617, 709, 1213, 1794
MboI	GATC	7 cut(s)	100, 169, 373, 615, 707, 1211, 1792
MboII	GAAGA	8 cut(s)	111, 318, 442, 956, 1173, 1400, 1724, 1919
MfeI	CAATTG	1 cut(s)	1778
MflI	RGATCY	1 cut(s)	373
MhlI	GDGCHC	3 cut(s)	77, 741, 1225
MlsI	TGGCCA	2 cut(s)	350, 730
MluNI	TGGCCA	2 cut(s)	350, 730
MlyI	GAGTC	1 cut(s)	153
MmeI	TCCRAC	2 cut(s)	181, 672
Mox20I	TGGCCA	2 cut(s)	350, 730
MroI	TCCGGA	1 cut(s)	1525
MroXI	GAANNNNTTC	1 cut(s)	1848
MscI	TGGCCA	2 cut(s)	350, 730
MseI	TTAA	8 cut(s)	513, 896, 1023, 1098, 1295, 1484, 1625, 1960
MslI	CAYNNNNRTG	4 cut(s)	108, 1176, 1768, 1853
Msp20I	TGGCCA	2 cut(s)	350, 730
MspCI	CTTAAG	1 cut(s)	1294
MspI	CCGG	2 cut(s)	473, 1526
MspR9I	CCNGG	2 cut(s)	780, 1788
MunI	CAATTG	1 cut(s)	1778
Mva1269I	GAATGC	1 cut(s)	529
MvaI	CCWGG	2 cut(s)	780, 1788
MvnI	CGCG	1 cut(s)	419
MwoI	GCNNNNNNNGC	3 cut(s)	736, 1637, 1864
NcoI	CCATGG	1 cut(s)	731
NdeII	GATC	7 cut(s)	100, 169, 373, 615, 707, 1211, 1792
NlaIII	CATG	9 cut(s)	457, 612, 634, 649, 735, 976, 1175, 1243, 1372
NlaIV	GGNNCC	4 cut(s)	375, 403, 738, 1507
NmuCI	GTSAC	1 cut(s)	220
NspI	RCATGY	1 cut(s)	1243
PagI	TCATGA	1 cut(s)	453
PciI	ACATGT	1 cut(s)	1239
PciSI	GCTCTTC	1 cut(s)	331
PctI	GAATGC	1 cut(s)	529
PdmI	GAANNNNTTC	1 cut(s)	1848
PfeI	GAWTC	5 cut(s)	39, 575, 812, 826, 1284
PkrI	GCNGC	5 cut(s)	13, 128, 666, 1498, 1639
Ple19I	CGATCG	1 cut(s)	618
PleI	GAGTC	1 cut(s)	153
PpsI	GAGTC	1 cut(s)	153
PscI	ACATGT	1 cut(s)	1239
PshAI	GACNNNNGTC	1 cut(s)	1446
PshBI	ATTAAT	1 cut(s)	513
Psp6I	CCWGG	2 cut(s)	778, 1786
PspGI	CCWGG	2 cut(s)	778, 1786
PspN4I	GGNNCC	4 cut(s)	375, 403, 738, 1507
PspPI	GGNCC	1 cut(s)	1333
PsrI	GAACNNNNNNTAC	4 cut(s)	626, 658, 1667, 1699
PsuI	RGATCY	1 cut(s)	373
PvuI	CGATCG	1 cut(s)	618
RsaI	GTAC	4 cut(s)	867, 932, 986, 1238
RsaNI	GTAC	4 cut(s)	866, 931, 985, 1237
RseI	CAYNNNNRTG	4 cut(s)	108, 1176, 1768, 1853
SapI	GCTCTTC	1 cut(s)	331
SaqAI	TTAA	8 cut(s)	513, 896, 1023, 1098, 1295, 1484, 1625, 1960
SatI	GCNGC	5 cut(s)	12, 127, 665, 1497, 1638
Sau3AI	GATC	7 cut(s)	100, 169, 373, 615, 707, 1211, 1792
Sau96I	GGNCC	1 cut(s)	1333
SchI	GAGTC	1 cut(s)	153
ScrFI	CCNGG	2 cut(s)	780, 1788
SduI	GDGCHC	3 cut(s)	77, 741, 1225
SfaNI	GCATC	5 cut(s)	289, 547, 1363, 1705, 1815
SfcI	CTRYAG	2 cut(s)	78, 1576
SmiI	ATTTAAAT	1 cut(s)	1626
SmiMI	CAYNNNNRTG	4 cut(s)	108, 1176, 1768, 1853
SmlI	CTYRAG	1 cut(s)	1294
SmoI	CTYRAG	1 cut(s)	1294
SsiI	CCGC	4 cut(s)	126, 183, 419, 1494
SspI	AATATT	3 cut(s)	307, 1377, 1546
SspMI	CTAG	3 cut(s)	56, 869, 1325
StyD4I	CCNGG	2 cut(s)	778, 1786
StyI	CCWWGG	1 cut(s)	731
SwaI	ATTTAAAT	1 cut(s)	1626
TaaI	ACNGT	5 cut(s)	79, 110, 226, 435, 704
TaqI	TCGA	5 cut(s)	614, 750, 926, 1710, 1805
TatI	WGTACW	3 cut(s)	865, 930, 1236
TauI	GCSGC	1 cut(s)	129
TfiI	GAWTC	5 cut(s)	39, 575, 812, 826, 1284
Tru1I	TTAA	8 cut(s)	513, 896, 1023, 1098, 1295, 1484, 1625, 1960
Tru9I	TTAA	8 cut(s)	513, 896, 1023, 1098, 1295, 1484, 1625, 1960
TscAI	CASTG	6 cut(s)	82, 229, 370, 843, 1693, 1726
TseFI	GTSAC	1 cut(s)	220
TseI	GCWGC	4 cut(s)	11, 664, 1496, 1637
Tsp45I	GTSAC	1 cut(s)	220
TspRI	CASTG	6 cut(s)	82, 229, 370, 843, 1693, 1726
Vha464I	CTTAAG	1 cut(s)	1294
VneI	GTGCAC	1 cut(s)	73
VspI	ATTAAT	1 cut(s)	513
XapI	RAATTY	9 cut(s)	478, 873, 947, 1164, 1317, 1420, 1621, 1653, 1844
XceI	RCATGY	1 cut(s)	1243
XmiI	GTMKAC	2 cut(s)	19, 1774
XmnI	GAANNNNTTC	1 cut(s)	1848
XspI	CTAG	3 cut(s)	56, 869, 1325

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.