Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003459.1

Orthogroup ID

OG0002358

Physical Location & Seq

Genomic Coordinates Reverse (-)

75713 .. 95233

Gene Structure 19521 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0003459.1_g000016.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2685 bp

atgattctatctatgagttgctcggatccttaccaaggaaattgcagccatggcggaagaatgaaagttttgggtctcagagttttggcgaaaatggagcctccagccatggcggctcgtctcgttgaagacttgaaggtgtatctgggtgggaaagaaaacaatgaaaatagagatttgccgaatctctatagatccaccaccacagcgatggaggggttaaggcaactggaggccttgtgtgagaggttgtacaattcgcaggactcggttgagcgagcccacgctgaaaacactctcaaatgcttttctgtgaacattgaatacatttcgcaatgccagtacattcttgataatgccatgacgccgtatgctctgatgctagctagctctagtttgttgaagcaagtcactgatcatagccttgccttgcagcttcgtcttgatatccggagctaccttgtaaactatctggccactagaggacctgagttgcagccgtttgttactgcttccttaatccaactcttatgccgactcaccaagtttgggtggtttgatgatgacagattcaaggatgtcgttaaagagtccatgaacttcttgaaccagttgtcagagcttgtgaatgtggaaggttatagtgactggattcgattagtagcagagttcacgctaaagtctttgcagtcctggaagtgggccagcagcagtgtgtactatcttttaggactgtggtctagattggtgacatctgtaccatacttgaaaggcgaggcacccagcttgcttgaagaatttgtgcctaagattgccgaaagtttcatcacatcgagatttaactctgtgcaggatggatcttcagatgatctttctgaaaacccactagacaatgttgaacttcttcaggatcagttagattgcttcccttacctctgcagattccagtatgaaggcagtagtttatatataataaacacagtggaacccattttacaaatatacacggaaagagctcgcatgccgcccagtgaaatcagtgacctctctgtcattgaagccaaacttgcttggattgttcatatcgttgctgctattcttaagataaaacaatgtactggttgtagtgttgagtcacaagaactatttgatgcggaactttcagctcgcatcttgcaattgattaatgttaccgacagtggggtacacagccagagatatggtgaaataagcaagcaaaggcttgaccgtgcaattcttacctttttccaacattttcggaagtcttatgttggtgatcaggccatgcattcttcgaagcagttatatgcgcgcctttctgaacttcttggacttcatgatcatcttttaatgttgaatgtgattgttggaaagattgctacaaacctgaaatgttacaccgagagtgaggaggtcattggtcacaccttgagtttgttcttggagctggcatctggatacatgactggcaagctgcttttgaagttggatactgttaaatttatagtgtccaatcatactagggagcacttcccctttttagaagaatatagatgttctcgtagtagaacaactttttattttacaattggttggttaatattcatggaagacagccctgtgaagtttaaatcttcaatggatccacttttgcaagtttttatcaatctcgaatcaactcctgatgcaatgtttcgcactgataatgtaaagtatgcattaatcgggctgatgagggatcttcggggaattgccatggccacaaatagtcgcagaacgtttgggcttctgtttgattggctgtatcctgcacacatgccacttcttttgaaaggcatcttgcattggtctgacacaccagaggttactacccctttgttgaaattcatggctgagtttgtactgaacaaagcccaacgcttgacttttgactcatcttctcctaatggcatacttcttttccgagaagtcagtaaactgattgttgcttatggtatcttgctgccaaacaacacagctcttgctggaaactatgtcaactttggggtgtttgagctatatggagatagagcactttctgatgcacttgatattgcactaaagttggcattatcaattcctttggctgatatattggcattccgtaagctaacaagagcctactttgcgtttttagaggtcttattcaacagccacatagtttacatactgaatctggataccagtacttttatgcatattgttggatctcttgaatctggcctcaaaggtctagatacaagtatctcatcacagtgtgcgtctgctgtagataatttggcagccttttattttaacaacattaccatgggcgaggcacctacattacctactgcagtaaatcttgctcgccacattgcagactgccccaatttgtttccagaagactgtggtaaccagtggagtcttagcagaccaatgctgagcttaattcttattagtgagcagatattctctgatttgaaagttcggatcatggcttcacagccagtggatcatcaccagcggctttccctgtgttttgacaagctaatggcagatgttactaggagcttggattcaaagaacagggacaagttcactcaaaacctcactgtattcagaaatgattttcgtgtgaaataa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005049 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005643 GO:0005737 GO:0006611 GO:0006810 GO:0006886 GO:0006913 GO:0008104 GO:0008150 GO:0008536 GO:0012505 GO:0015031 GO:0015833 GO:0017016 GO:0019899 GO:0031267 GO:0031967 GO:0031975 GO:0032991 GO:0033036 GO:0034613 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045184 GO:0046907 GO:0051020 GO:0051168 GO:0051169 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0070727 GO:0071702 GO:0071705 GO:0140104 GO:0140142

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

IBN_N

Protein Analysis

894

Amino Acids

101.36

Weight (kDa)

5.94

Isoelectric Point (pI)

40.49

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002358)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G06120 AT5G06120 AT5G06120 AT5G06120 AT5G06120 AT5G06120 AT5G06120 AT5G06120 AT5G06120 AT5G06120
fragaria_vesca	FvH4_7g04530 FvH4_7g04530 FvH4_7g04530 FvH4_7g04530 FvH4_7g04530 FvH4_7g04530 FvH4_7g04530 FvH4_7g04530 FvH4_7g04530
malus_domestica	MD02G1207800.v1.1 MD07G1118000.v1.1
prunus_persica	Prupe.2G050900_v2.0.a1 Prupe.2G050900_v2.0.a1 Prupe.2G050900_v2.0.a1 Prupe.2G050900_v2.0.a1 Prupe.2G051400_v2.0.a1
pyrus_communis	pycom02g17010 pycom07g10620
rosa_chinensis	RchiOBHm_Chr1g0329811
rosa_laevigata	RLG00000029862
rosa_multiflora	Rmu_co8519431.1_g000001 Rmu_sc0003459.1_g000016
rosa_roxburghii	Rroxscaffold_4G00320670
rosa_rugosa	Rorug01G0083100 Rorug01G0083200 Rorug01G0083300 Rorug01G0083400
rosa_samantha	Rh1AG101400 Rh1BG080600 Rh1CG097100 Rh1DG104700
rosa_wichuraiana	Rw1G008010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1049
AccB1I	GGYRCC	2 cut(s)	778, 2377
AccII	CGCG	1 cut(s)	1333
AccIII	TCCGGA	1 cut(s)	450
AciI	CCGC	5 cut(s)	54, 113, 1025, 1154, 2566
AclI	AACGTT	1 cut(s)	1799
AcoI	YGGCCR	2 cut(s)	474, 1779
AcsI	RAATTY	3 cut(s)	797, 1520, 1904
AcuI	CTGAAG	2 cut(s)	846, 890
AcyI	GRCGYC	1 cut(s)	365
AdeI	CACNNNGTG	1 cut(s)	2318
AfaI	GTAC	8 cut(s)	254, 344, 719, 759, 1117, 1206, 1923, 2248
AfiI	CCNNNNNNNGG	4 cut(s)	35, 549, 699, 1200
AflII	CTTAAG	1 cut(s)	1100
AjnI	CCWGG	1 cut(s)	692
Alw21I	GWGCWC	3 cut(s)	1018, 1551, 2095
Alw26I	GTCTC	2 cut(s)	80, 125
Aor13HI	TCCGGA	1 cut(s)	450
AoxI	GGCC	6 cut(s)	234, 474, 702, 1302, 1779, 2281
ApeKI	GCWGC	8 cut(s)	45, 433, 496, 708, 1091, 1495, 2023, 2342
ApoI	RAATTY	3 cut(s)	797, 1520, 1904
AseI	ATTAAT	2 cut(s)	1185, 1742
Asp700I	GAANNNNTTC	1 cut(s)	903
AspLEI	GCGC	2 cut(s)	1333, 1335
AspS9I	GGNCC	2 cut(s)	485, 702
AsuHPI	GGTGA	5 cut(s)	532, 760, 1235, 1307, 2552
AsuII	TTCGAA	1 cut(s)	1316
AsuNHI	GCTAGC	2 cut(s)	382, 386
AvaII	GGWCC	1 cut(s)	485
BaeI	ACNNNNGTAYC	2 cut(s)	741, 774
BalI	TGGCCA	2 cut(s)	476, 1781
BamHI	GGATCC	2 cut(s)	25, 1663
BanI	GGYRCC	2 cut(s)	778, 2377
BanII	GRGCYC	2 cut(s)	283, 1018
BbsI	GAAGAC	3 cut(s)	135, 1638, 2451
Bbv12I	GWGCWC	3 cut(s)	1018, 1551, 2095
BbvI	GCAGC	8 cut(s)	57, 445, 508, 720, 1078, 1482, 2010, 2354
BccI	CCATC	2 cut(s)	205, 848
BceAI	ACGGC	2 cut(s)	352, 484
BciT130I	CCWGG	1 cut(s)	694
BciVI	GTATCC	4 cut(s)	1472, 1504, 1836, 2233
BclI	TGATCA	3 cut(s)	415, 1297, 1360
BcoDI	GTCTC	2 cut(s)	80, 125
BfaI	CTAG	9 cut(s)	383, 387, 393, 480, 741, 887, 1542, 2294, 2607
BfmI	CTRYAG	4 cut(s)	190, 937, 2328, 2394
BfrI	CTTAAG	1 cut(s)	1100
BfuI	GTATCC	4 cut(s)	1472, 1504, 1836, 2233
BglI	GCCNNNNNGGC	1 cut(s)	113
BlpI	GCTNAGC	1 cut(s)	2483
BmcAI	AGTACT	1 cut(s)	2248
Bme1390I	CCNGG	1 cut(s)	694
Bme18I	GGWCC	1 cut(s)	485
BmgT120I	GGNCC	2 cut(s)	485, 702
BmiI	GGNNCC	6 cut(s)	27, 99, 780, 987, 1665, 2379
BmrFI	CCNGG	1 cut(s)	694
BmrI	ACTGGG	1 cut(s)	1023
BmsI	GCATC	7 cut(s)	369, 1141, 1179, 1481, 1696, 1866, 2092
BmtI	GCTAGC	2 cut(s)	386, 390
BmuI	ACTGGG	1 cut(s)	1023
BoxI	GACNNNNGTC	1 cut(s)	736
BpiI	GAAGAC	3 cut(s)	135, 1638, 2451
BpmI	CTGGAG	2 cut(s)	87, 251
Bpu1102I	GCTNAGC	1 cut(s)	2483
Bpu14I	TTCGAA	1 cut(s)	1316
BpuEI	CTTGAG	1 cut(s)	1471
BsaHI	GRCGYC	1 cut(s)	365
BsaI	GGTCTC	1 cut(s)	80
BsaJI	CCNNGG	5 cut(s)	34, 49, 108, 1776, 2367
BsaWI	WCCGGW	1 cut(s)	450
BsaXI	ACNNNNNCTCC	2 cut(s)	224, 254
Bsc4I	CCNNNNNNNGG	4 cut(s)	35, 549, 699, 1200
Bse3DI	GCAATG	3 cut(s)	341, 1716, 2415
BseAI	TCCGGA	1 cut(s)	450
BseBI	CCWGG	1 cut(s)	694
BseDI	CCNNGG	5 cut(s)	34, 49, 108, 1776, 2367
BseGI	GGATG	2 cut(s)	583, 859
BseLI	CCNNNNNNNGG	4 cut(s)	35, 549, 699, 1200
BseMI	GCAATG	3 cut(s)	341, 1716, 2415
BseMII	CTCAG	4 cut(s)	91, 480, 1905, 2474
BsePI	GCGCGC	1 cut(s)	1331
BseRI	GAGGAG	1 cut(s)	1445
BseXI	GCAGC	8 cut(s)	57, 445, 508, 720, 1078, 1482, 2010, 2354
BseYI	CCCAGC	1 cut(s)	782
BsgI	GTGCAG	2 cut(s)	869, 1815
Bsh1236I	CGCG	1 cut(s)	1333
BshFI	GGCC	6 cut(s)	236, 476, 704, 1304, 1781, 2283
BshNI	GGYRCC	2 cut(s)	778, 2377
BsiHKAI	GWGCWC	3 cut(s)	1018, 1551, 2095
BsiSI	CCGG	1 cut(s)	451
BslFI	GGGAC	1 cut(s)	2645
BslI	CCNNNNNNNGG	4 cut(s)	35, 549, 699, 1200
BsmAI	GTCTC	2 cut(s)	80, 125
BsmBI	CGTCTC	1 cut(s)	125
BsmFI	GGGAC	1 cut(s)	2645
BsmI	GAATGC	2 cut(s)	1309, 2159
BsnI	GGCC	6 cut(s)	236, 476, 704, 1304, 1781, 2283
Bso31I	GGTCTC	1 cut(s)	80
Bsp119I	TTCGAA	1 cut(s)	1316
Bsp1286I	GDGCHC	4 cut(s)	283, 1018, 1551, 2095
Bsp13I	TCCGGA	1 cut(s)	450
Bsp1407I	TGTACA	1 cut(s)	252
Bsp1720I	GCTNAGC	1 cut(s)	2483
Bsp19I	CCATGG	4 cut(s)	49, 108, 1776, 2367
BspACI	CCGC	5 cut(s)	54, 113, 1025, 1154, 2566
BspANI	GGCC	6 cut(s)	236, 476, 704, 1304, 1781, 2283
BspCNI	CTCAG	4 cut(s)	90, 481, 1906, 2475
BspEI	TCCGGA	1 cut(s)	450
BspFNI	CGCG	1 cut(s)	1333
BspHI	TCATGA	1 cut(s)	1357
BspLI	GGNNCC	6 cut(s)	27, 99, 780, 987, 1665, 2379
BspMAI	CTGCAG	2 cut(s)	941, 2398
BspOI	GCTAGC	2 cut(s)	386, 390
BspT104I	TTCGAA	1 cut(s)	1316
BspT107I	GGYRCC	2 cut(s)	778, 2377
BspTI	CTTAAG	1 cut(s)	1100
BspTNI	GGTCTC	1 cut(s)	80
BsrDI	GCAATG	3 cut(s)	341, 1716, 2415
BsrGI	TGTACA	1 cut(s)	252
BssECI	CCNNGG	5 cut(s)	34, 49, 108, 1776, 2367
BssHII	GCGCGC	1 cut(s)	1331
BssNI	GRCGYC	1 cut(s)	365
BssT1I	CCWWGG	5 cut(s)	34, 49, 108, 1776, 2367
Bst2UI	CCWGG	1 cut(s)	694
Bst4CI	ACNGT	8 cut(s)	735, 982, 1199, 1250, 1516, 2316, 2450, 2656
BstACI	GRCGYC	1 cut(s)	365
BstAFI	CTTAAG	1 cut(s)	1100
BstAUI	TGTACA	1 cut(s)	252
BstBI	TTCGAA	1 cut(s)	1316
BstDEI	CTNAG	6 cut(s)	77, 489, 807, 1914, 2468, 2483
BstDSI	CCRYGG	4 cut(s)	49, 108, 1776, 2367
BstEII	GGTNACC	1 cut(s)	2453
BstENI	CCTNNNNNAGG	1 cut(s)	33
BstF5I	GGATG	2 cut(s)	583, 859
BstFNI	CGCG	1 cut(s)	1333
BstHHI	GCGC	2 cut(s)	1333, 1335
BstMAI	GTCTC	2 cut(s)	80, 125
BstMWI	GCNNNNNNNGC	4 cut(s)	51, 113, 1067, 2186
BstNI	CCWGG	1 cut(s)	694
BstNSI	RCATGY	2 cut(s)	1024, 1840
BstPAI	GACNNNNGTC	1 cut(s)	736
BstPI	GGTNACC	1 cut(s)	2453
BstSCI	CCNGG	1 cut(s)	692
BstSFI	CTRYAG	4 cut(s)	190, 937, 2328, 2394
BstUI	CGCG	1 cut(s)	1333
BstV1I	GCAGC	8 cut(s)	57, 445, 508, 720, 1078, 1482, 2010, 2354
BstV2I	GAAGAC	3 cut(s)	135, 1638, 2451
BstX2I	RGATCY	6 cut(s)	25, 194, 857, 1663, 1759, 2267
BstXI	CCANNNNNNTGG	2 cut(s)	211, 1220
BstYI	RGATCY	6 cut(s)	25, 194, 857, 1663, 1759, 2267
BsuI	GTATCC	4 cut(s)	1472, 1504, 1836, 2233
BsuRI	GGCC	6 cut(s)	236, 476, 704, 1304, 1781, 2283
BtgI	CCRYGG	4 cut(s)	49, 108, 1776, 2367
BtgZI	GCGATG	1 cut(s)	224
BtsCI	GGATG	2 cut(s)	583, 859
BtsI	GCAGTG	1 cut(s)	718
CciI	TCATGA	1 cut(s)	1357
CfoI	GCGC	2 cut(s)	1333, 1335
Cfr13I	GGNCC	2 cut(s)	485, 702
CseI	GACGC	2 cut(s)	373, 2310
Csp6I	GTAC	8 cut(s)	253, 343, 718, 758, 1116, 1205, 1922, 2247
CspCI	CAANNNNNGTGG	2 cut(s)	1830, 1865
CviQI	GTAC	8 cut(s)	253, 343, 718, 758, 1116, 1205, 1922, 2247
DdeI	CTNAG	6 cut(s)	77, 489, 807, 1914, 2468, 2483
DraI	TTTAAA	1 cut(s)	1651
DraIII	CACNNNGTG	1 cut(s)	2318
DrdI	GACNNNNNNGTC	1 cut(s)	1049
DseDI	GACNNNNNNGTC	1 cut(s)	1049
EaeI	YGGCCR	2 cut(s)	474, 1779
EciI	GGCGGA	1 cut(s)	69
Ecl136II	GAGCTC	1 cut(s)	1016
Eco130I	CCWWGG	5 cut(s)	34, 49, 108, 1776, 2367
Eco147I	AGGCCT	1 cut(s)	236
Eco24I	GRGCYC	2 cut(s)	283, 1018
Eco31I	GGTCTC	1 cut(s)	80
Eco32I	GATATC	1 cut(s)	448
Eco47I	GGWCC	1 cut(s)	485
Eco53kI	GAGCTC	1 cut(s)	1016
Eco57I	CTGAAG	2 cut(s)	846, 890
Eco91I	GGTNACC	1 cut(s)	2453
EcoICRI	GAGCTC	1 cut(s)	1016
EcoNI	CCTNNNNNAGG	1 cut(s)	33
EcoO109I	RGGNCCY	1 cut(s)	485
EcoO65I	GGTNACC	1 cut(s)	2453
EcoRII	CCWGG	1 cut(s)	692
EcoRV	GATATC	1 cut(s)	448
EcoT14I	CCWWGG	5 cut(s)	34, 49, 108, 1776, 2367
EcoT22I	ATGCAT	3 cut(s)	1311, 1741, 2259
EcoT38I	GRGCYC	2 cut(s)	283, 1018
ErhI	CCWWGG	5 cut(s)	34, 49, 108, 1776, 2367
Esp3I	CGTCTC	1 cut(s)	125
FalI	AAGNNNNNCTT	2 cut(s)	1050, 1082
FaqI	GGGAC	1 cut(s)	2645
FbaI	TGATCA	3 cut(s)	415, 1297, 1360
FokI	GGATG	2 cut(s)	590, 866
FriOI	GRGCYC	2 cut(s)	283, 1018
FspBI	CTAG	9 cut(s)	383, 387, 393, 480, 741, 887, 1542, 2294, 2607
GlaI	GCGC	2 cut(s)	1332, 1334
GsaI	CCCAGC	1 cut(s)	786
GsuI	CTGGAG	2 cut(s)	87, 251
HaeIII	GGCC	6 cut(s)	236, 476, 704, 1304, 1781, 2283
HapII	CCGG	1 cut(s)	451
HgaI	GACGC	2 cut(s)	373, 2310
HhaI	GCGC	2 cut(s)	1333, 1335
Hin1I	GRCGYC	1 cut(s)	365
Hin6I	GCGC	2 cut(s)	1331, 1333
HinP1I	GCGC	2 cut(s)	1331, 1333
HincII	GTYRAC	1 cut(s)	2059
HindII	GTYRAC	1 cut(s)	2059
HpaII	CCGG	1 cut(s)	451
HphI	GGTGA	5 cut(s)	532, 760, 1235, 1307, 2552
Hpy166II	GTNNAC	9 cut(s)	316, 466, 672, 718, 1207, 1997, 2059, 2224, 2640
Hpy8I	GTNNAC	9 cut(s)	316, 466, 672, 718, 1207, 1997, 2059, 2224, 2640
HpyAV	CCTTC	3 cut(s)	130, 629, 947
HpyCH4III	ACNGT	8 cut(s)	735, 982, 1199, 1250, 1516, 2316, 2450, 2656
HpyCH4IV	ACGT	1 cut(s)	1799
HpyF10VI	GCNNNNNNNGC	4 cut(s)	51, 113, 1067, 2186
HpyF3I	CTNAG	6 cut(s)	77, 489, 807, 1914, 2468, 2483
HpySE526I	ACGT	1 cut(s)	1799
Hsp92I	GRCGYC	1 cut(s)	365
HspAI	GCGC	2 cut(s)	1331, 1333
Kpn2I	TCCGGA	1 cut(s)	450
Ksp22I	TGATCA	3 cut(s)	415, 1297, 1360
LmnI	GCTCC	5 cut(s)	97, 453, 1465, 1546, 2610
Lsp1109I	GCAGC	8 cut(s)	57, 445, 508, 720, 1078, 1482, 2010, 2354
LweI	GCATC	7 cut(s)	369, 1141, 1179, 1481, 1696, 1866, 2092
MaeI	CTAG	9 cut(s)	383, 387, 393, 480, 741, 887, 1542, 2294, 2607
MaeII	ACGT	1 cut(s)	1799
MfeI	CAATTG	2 cut(s)	1178, 1608
MflI	RGATCY	6 cut(s)	25, 194, 857, 1663, 1759, 2267
MhlI	GDGCHC	4 cut(s)	283, 1018, 1551, 2095
MlsI	TGGCCA	2 cut(s)	476, 1781
MluNI	TGGCCA	2 cut(s)	476, 1781
MlyI	GAGTC	6 cut(s)	260, 531, 599, 1142, 1946, 2473
MmeI	TCCRAC	5 cut(s)	547, 1294, 1369, 1488, 2245
Mox20I	TGGCCA	2 cut(s)	476, 1781
Mph1103I	ATGCAT	3 cut(s)	1311, 1741, 2259
MroI	TCCGGA	1 cut(s)	450
MroXI	GAANNNNTTC	1 cut(s)	903
MscI	TGGCCA	2 cut(s)	476, 1781
MslI	CAYNNNNRTG	3 cut(s)	209, 2314, 2366
Msp20I	TGGCCA	2 cut(s)	476, 1781
MspA1I	CMGCKG	1 cut(s)	2566
MspCI	CTTAAG	1 cut(s)	1100
MspI	CCGG	1 cut(s)	451
MspR9I	CCNGG	1 cut(s)	694
MunI	CAATTG	2 cut(s)	1178, 1608
Mva1269I	GAATGC	2 cut(s)	1309, 2159
MvaI	CCWGG	1 cut(s)	694
MvnI	CGCG	1 cut(s)	1333
MwoI	GCNNNNNNNGC	4 cut(s)	51, 113, 1067, 2186
NcoI	CCATGG	4 cut(s)	49, 108, 1776, 2367
NheI	GCTAGC	2 cut(s)	382, 386
NlaIV	GGNNCC	6 cut(s)	27, 99, 780, 987, 1665, 2379
NmuCI	GTSAC	6 cut(s)	409, 644, 748, 1040, 1134, 1442
NsiI	ATGCAT	3 cut(s)	1311, 1741, 2259
NspI	RCATGY	2 cut(s)	1024, 1840
NspV	TTCGAA	1 cut(s)	1316
PaeI	GCATGC	1 cut(s)	1024
PagI	TCATGA	1 cut(s)	1357
PauI	GCGCGC	1 cut(s)	1331
PceI	AGGCCT	1 cut(s)	236
PctI	GAATGC	2 cut(s)	1309, 2159
PdmI	GAANNNNTTC	1 cut(s)	903
PfeI	GAWTC	9 cut(s)	4, 184, 570, 652, 942, 1694, 2233, 2276, 2618
PfoI	TCCNGGA	1 cut(s)	692
PleI	GAGTC	6 cut(s)	260, 531, 598, 1141, 1946, 2472
PpsI	GAGTC	6 cut(s)	260, 531, 598, 1141, 1946, 2472
PpuMI	RGGWCCY	1 cut(s)	485
PshAI	GACNNNNGTC	1 cut(s)	736
PshBI	ATTAAT	2 cut(s)	1185, 1742
Psp124BI	GAGCTC	1 cut(s)	1018
Psp1406I	AACGTT	1 cut(s)	1799
Psp5II	RGGWCCY	1 cut(s)	485
Psp6I	CCWGG	1 cut(s)	692
PspEI	GGTNACC	1 cut(s)	2453
PspFI	CCCAGC	1 cut(s)	782
PspGI	CCWGG	1 cut(s)	692
PspN4I	GGNNCC	6 cut(s)	27, 99, 780, 987, 1665, 2379
PspPI	GGNCC	2 cut(s)	485, 702
PspPPI	RGGWCCY	1 cut(s)	485
PsrI	GAACNNNNNNTAC	4 cut(s)	308, 340, 978, 1010
PstI	CTGCAG	2 cut(s)	941, 2398
PsuI	RGATCY	6 cut(s)	25, 194, 857, 1663, 1759, 2267
PteI	GCGCGC	1 cut(s)	1331
RsaI	GTAC	8 cut(s)	254, 344, 719, 759, 1117, 1206, 1923, 2248
RsaNI	GTAC	8 cut(s)	253, 343, 718, 758, 1116, 1205, 1922, 2247
RseI	CAYNNNNRTG	3 cut(s)	209, 2314, 2366
SacI	GAGCTC	1 cut(s)	1018
Sau96I	GGNCC	2 cut(s)	485, 702
ScaI	AGTACT	1 cut(s)	2248
SchI	GAGTC	6 cut(s)	260, 531, 599, 1142, 1946, 2473
ScrFI	CCNGG	1 cut(s)	694
SduI	GDGCHC	4 cut(s)	283, 1018, 1551, 2095
SfaNI	GCATC	7 cut(s)	369, 1141, 1179, 1481, 1696, 1866, 2092
SfcI	CTRYAG	4 cut(s)	190, 937, 2328, 2394
SfuI	TTCGAA	1 cut(s)	1316
SinI	GGWCC	1 cut(s)	485
SmiMI	CAYNNNNRTG	3 cut(s)	209, 2314, 2366
SmlI	CTYRAG	2 cut(s)	1100, 1450
SmoI	CTYRAG	2 cut(s)	1100, 1450
SphI	GCATGC	1 cut(s)	1024
SseBI	AGGCCT	1 cut(s)	236
SsiI	CCGC	5 cut(s)	54, 113, 1025, 1154, 2566
SspI	AATATT	1 cut(s)	1623
SspMI	CTAG	9 cut(s)	383, 387, 393, 480, 741, 887, 1542, 2294, 2607
SstI	GAGCTC	1 cut(s)	1018
StuI	AGGCCT	1 cut(s)	236
StyD4I	CCNGG	1 cut(s)	692
StyI	CCWWGG	5 cut(s)	34, 49, 108, 1776, 2367
TaaI	ACNGT	8 cut(s)	735, 982, 1199, 1250, 1516, 2316, 2450, 2656
TaiI	ACGT	1 cut(s)	1802
TaqI	TCGA	4 cut(s)	655, 833, 1316, 1692
TatI	WGTACW	6 cut(s)	252, 342, 717, 1115, 1921, 2246
TauI	GCSGC	3 cut(s)	116, 1027, 2569
TfiI	GAWTC	9 cut(s)	4, 184, 570, 652, 942, 1694, 2233, 2276, 2618
TseFI	GTSAC	6 cut(s)	409, 644, 748, 1040, 1134, 1442
TseI	GCWGC	8 cut(s)	45, 433, 496, 708, 1091, 1495, 2023, 2342
Tsp45I	GTSAC	6 cut(s)	409, 644, 748, 1040, 1134, 1442
TspDTI	ATGAA	9 cut(s)	77, 180, 611, 814, 966, 1070, 1346, 1615, 1897
TspGWI	ACGGA	2 cut(s)	1022, 2153
Vha464I	CTTAAG	1 cut(s)	1100
VpaK11BI	GGWCC	1 cut(s)	485
VspI	ATTAAT	2 cut(s)	1185, 1742
XagI	CCTNNNNNAGG	1 cut(s)	33
XapI	RAATTY	3 cut(s)	797, 1520, 1904
XbaI	TCTAGA	2 cut(s)	740, 2293
XceI	RCATGY	2 cut(s)	1024, 1840
XcmI	CCANNNNNNNNNTGG	1 cut(s)	208
XmnI	GAANNNNTTC	1 cut(s)	903
XspI	CTAG	9 cut(s)	383, 387, 393, 480, 741, 887, 1542, 2294, 2607
ZrmI	AGTACT	1 cut(s)	2248
Zsp2I	ATGCAT	3 cut(s)	1311, 1741, 2259

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.