Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0002358

Physical Location & Seq

Genomic Coordinates Reverse (-)

49479082 .. 49497266

Gene Structure 18185 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00320670.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2907 bp

ATGGAGGGGTTAAGGCAACTGGAGGCCTTGTGTGAGAGGTTGTACAATTCACAGGACTCGGTTGAGCGAGCCCACGCCGAAAACACTCTCAAATGCTTTTCTGTGAACATTGAATACATTTCGCAATGCCAGTACATTCTTGATAATGCCATGACGCCGTATGCTCTGATGCTAGCTAGCTCTAGTTTGTTGAAGCAAGTCACTGATCATAGCCTTGCCTTGCAGCTTCGTCTTGATATCCGGAGCTACCTTGTAAACTATCTGGCCACTAGAGGACCTGAGTTGCAGCCGTTTGTTACTGCTTCCTTAATCCAACTCTTATGTCGGCTCACCAAGTTTGGGTGGTTTGATGACGACAGATTCAAGGATGTGGTTAAAGAGTCCATGAACTTCTTGAACCAGGCAACTTCTGATCACTATGCCATTGGTTTGAAGATATTAAACCAACTTGTGTCTGAGATGAATCAGGGTTGCCTTCAACACATCATCGAAGGGTTGCCTGCAACTTCAGGGGATCAGTCTCTTTTCCAAATATTCCAGATCTCTTTAACATCATTGCGCCAACTGGAAAACAATGTTGAAAGTCGTTTGCGAGAGTTGGCTCTTTCTCTTTCTCTTAAATGTTTATCTTTTGATTTTGTGGGGACATCAATTGATGAAAGTTCAGAAGAATTTGGTACTGTTCAGATCCCAACTTCTTGGAGGTCAGTTTTGGAGGATCCTTCAACACTTCAAGTCTTCTTTGATTACTATGCCATTACAAAGGCCCCTCTGTCAAAGGAGGCACTGGAGTGCTTGGTGCGATTGGCTTCTGTTAGACGATCTTTGTTTACAAACGATGCTGCTCGTTCAAAGTTTTTGGCCCATTTGATGACAGGAACCAAAGAAATCCTACAAACAGGGCAAGGTCTTGCTGATCATGATAATTACCATGAGTATTGCCGTCTTCTTGGACGTTTCCGAGTTAATTATCAGTTGTCAGAACTTGTGAATGTGGAAGGTTATAGTGACTGGATTCGATTGGTAGCAGAGTTCACGCTAAAGTCTTTGCAGTCCTGGAAGGTTGACTGGCTTTCAGAACCCTCTCTTAGCTATTGCCATAATAATATTGCATATCAGGCATGGGCCAGCAGCAGTGTGTACTATCTTTTAGGACTGTGGTCTAGATTGGTGACATCTGTACCATACTTGAAAGGCGAGGCACCCAGCTTGCTTGAAGAATTTGTGCCTAAGATTGCCGAAAGTTTCATCACATCGAGATTTAACTCTGTGCAGGATGGATCTTCAGATGATCTTTCTGAAAACCCACTAGACAATGTTGAACTTCTTCAGGATCAGTTAGATTGCTTCCCTTACCTCTGCAGATTCCAGGAAAGGGCTCGCATGCCGCCCAGTGAAATCAGTGACCTCGCTGTCATTGAAGCCAAACTTGCTTGGATTGTTCATATCGTTGCTGCTATTCTTAAGATAAAACAATGTACTGGTTGTAGTGTTGAGTCACAAGAACTATTTGATGCGGAACTTTCAGCTCGCATCTTGCAATTGATTAATGTTACCGACAGTGGGGTACACAGCCAGCAGTTATATGCGCGCCTTTCTGAACTTCTTGGACTTCATGATCATCTTTTAATGTTGAATGTGATTGTTGGAAAGATTGCTACAAACCTGAAATGTTACACCGAGAGTGAGGAGGTCATTGGTCACACCCTGAGTTTGTTCTTGGAGCTGGCATCTGGATACATGACTGGCAAGCTGCTTTTGAAGTTGGATACTGTTAAATTTATAGTGTCCAATCATACTGTTTTTATCAATCTCGAATCAACTCCTGATGCAATGTTTCGCACTGATAATGTAAAGTATGCATTAATCGGGCTGATGAGGGATCTTCGGGGAATTGCCATGGCCACAAATAGTCGCAGAACGTTTGGGCTTCTGTTTGATTGGCTGTATCCTGCACACATGCCACTTCTTTTGAAAGGCATCTTGCATTGGTCTGACACACCAGAGGTTACTACCCCTTTGTTGAAATTCATGGCTGAGTTTGTACTGAACAAAGCCCAACGCTTGACTTTTGACTCATCTTCTCCTAATGGCATACTTCTTTTCCGAGAAGTCAGTAAACTGATTGTTGCTTATGGGTCAAGGATTCTGTCTCTTCCAAACGTTGCTGATATATATGCCTTCAAATACAAGGGAATATGGATTTCTTTAACTATTCTCACAAGAGCTCTTGCTGGAAACTATGTCAACTTTGGGGTGTTTGAGCTATATGGAGATAGAGCACTTTCTGATGCACTTGATATTGCACTAAAGTTGGCATTATCAATTCCTTTGGCTGATATATTGGCATTCCGTAAGTTCATGCTGGATTCTATGATATCAATGCTTTTTGATGCTATAAAAGTTTGTGTTTGCCTGACAAGAGCCTACTTTGCATTTTTAGAGGTCTTATTCAACAGCCACATAGTTTACATACTGAATCTGGATACCAGTACTTTTATGCATATTGTTGGATCTCTTGAATCTGGCCTCAAAGGTCTAGATACAAGTATCTCATCACAGGCACCTACATTACCTACTGCAGTAAATCTTGCTCGCCACATTGCAGACTGCCCCAATTTGTTTCCAGAAATACTGAAGACTCTGTTTGAGATTGTTTTATTCGAGGACTGTGGCAACCAGTGGAGTCTTAGCAGACCAATGCTGAGCTTAATTCTTATTAGTGAGCAGATATTCTCTGATTTGAAAGTTCGGATCATGGCTTCACAGCCAGTGGATCATCACCAGCGGCTTTCCCTGTGTTTTGACAAGCTAATGGCAGATGTTACTAGGAGCTTGGATTCAAAGAACAGGGACAAGTTCACTCAAAACCTCACTGTATTCAGAAATGATTTTCGTGTGAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005049 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005643 GO:0005737 GO:0006611 GO:0006810 GO:0006886 GO:0006913 GO:0008104 GO:0008150 GO:0008536 GO:0012505 GO:0015031 GO:0015833 GO:0017016 GO:0019899 GO:0031267 GO:0031967 GO:0031975 GO:0032991 GO:0033036 GO:0034613 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045184 GO:0046907 GO:0051020 GO:0051168 GO:0051169 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0070727 GO:0071702 GO:0071705 GO:0140104 GO:0140142

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

IBN_N

Protein Analysis

968

Amino Acids

109.47

Weight (kDa)

5.59

Isoelectric Point (pI)

41.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
IBN_N	PF03810	26 - 89	1.5e-07	Importin-beta N-terminal domain
TPR_XPO7	PF25795	457 - 527	4.7e-15	Exportin-7-like, TPR repeats
TPR_XPO7	PF25795	524 - 600	4.4e-30	Exportin-7-like, TPR repeats

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002358)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G06120 AT5G06120 AT5G06120 AT5G06120 AT5G06120 AT5G06120 AT5G06120 AT5G06120 AT5G06120 AT5G06120
fragaria_vesca	FvH4_7g04530 FvH4_7g04530 FvH4_7g04530 FvH4_7g04530 FvH4_7g04530 FvH4_7g04530 FvH4_7g04530 FvH4_7g04530 FvH4_7g04530
malus_domestica	MD02G1207800.v1.1 MD07G1118000.v1.1
prunus_persica	Prupe.2G050900_v2.0.a1 Prupe.2G050900_v2.0.a1 Prupe.2G050900_v2.0.a1 Prupe.2G050900_v2.0.a1 Prupe.2G051400_v2.0.a1
pyrus_communis	pycom02g17010 pycom07g10620
rosa_chinensis	RchiOBHm_Chr1g0329811
rosa_laevigata	RLG00000029862
rosa_multiflora	Rmu_co8519431.1_g000001 Rmu_sc0003459.1_g000016
rosa_roxburghii	Rroxscaffold_4G00320670
rosa_rugosa	Rorug01G0083100 Rorug01G0083200 Rorug01G0083300 Rorug01G0083400
rosa_samantha	Rh1AG101400 Rh1BG080600 Rh1CG097100 Rh1DG104700
rosa_wichuraiana	Rw1G008010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1412
AccB1I	GGYRCC	2 cut(s)	1201, 2563
AccII	CGCG	1 cut(s)	1591
AccIII	TCCGGA	1 cut(s)	240
AciI	CCGC	3 cut(s)	1388, 1517, 2788
AclI	AACGTT	2 cut(s)	1922, 2163
AcoI	YGGCCR	2 cut(s)	264, 1902
AcsI	RAATTY	4 cut(s)	671, 1220, 1778, 2027
AcuI	CTGAAG	4 cut(s)	492, 1269, 1313, 2657
AcyI	GRCGYC	1 cut(s)	155
AfaI	GTAC	9 cut(s)	44, 134, 679, 1142, 1182, 1480, 1569, 2046, 2494
AfiI	CCNNNNNNNGG	3 cut(s)	339, 1375, 1563
AflII	CTTAAG	1 cut(s)	1463
AjnI	CCWGG	3 cut(s)	399, 1055, 1368
AleI	CACNNNNGTG	1 cut(s)	790
Alw21I	GWGCWC	2 cut(s)	2230, 2284
Alw26I	GTCTC	2 cut(s)	525, 2157
Aor13HI	TCCGGA	1 cut(s)	240
AoxI	GGCC	7 cut(s)	24, 264, 765, 861, 1125, 1902, 2527
ApeKI	GCWGC	6 cut(s)	223, 286, 842, 1131, 1454, 1753
ApoI	RAATTY	4 cut(s)	671, 1220, 1778, 2027
AseI	ATTAAT	2 cut(s)	1548, 1865
Asp700I	GAANNNNTTC	1 cut(s)	1326
AspLEI	GCGC	3 cut(s)	561, 1591, 1593
AspS9I	GGNCC	4 cut(s)	275, 766, 862, 1125
AsuHPI	GGTGA	3 cut(s)	322, 1183, 2774
AsuNHI	GCTAGC	2 cut(s)	172, 176
AvaII	GGWCC	1 cut(s)	275
BaeI	ACNNNNGTAYC	2 cut(s)	1164, 1197
BalI	TGGCCA	2 cut(s)	266, 1904
BamHI	GGATCC	1 cut(s)	718
BanI	GGYRCC	2 cut(s)	1201, 2563
BanII	GRGCYC	3 cut(s)	73, 1381, 2230
BbsI	GAAGAC	3 cut(s)	730, 938, 2645
Bbv12I	GWGCWC	2 cut(s)	2230, 2284
BbvI	GCAGC	6 cut(s)	235, 298, 829, 1143, 1441, 1740
BccI	CCATC	1 cut(s)	1271
BceAI	ACGGC	3 cut(s)	142, 274, 927
BciT130I	CCWGG	3 cut(s)	401, 1057, 1370
BciVI	GTATCC	4 cut(s)	1730, 1762, 1959, 2479
BclI	TGATCA	4 cut(s)	205, 412, 916, 1618
BcoDI	GTCTC	2 cut(s)	525, 2157
BfaI	CTAG	8 cut(s)	173, 177, 183, 270, 1164, 1310, 2540, 2829
BfmI	CTRYAG	2 cut(s)	1360, 2580
BfrI	CTTAAG	1 cut(s)	1463
BfuI	GTATCC	4 cut(s)	1730, 1762, 1959, 2479
BglII	AGATCT	1 cut(s)	540
BisI	GCNGC	8 cut(s)	224, 287, 843, 1132, 1388, 1455, 1754, 2789
BlpI	GCTNAGC	1 cut(s)	2705
BlsI	GCNGC	8 cut(s)	225, 288, 844, 1133, 1389, 1456, 1755, 2790
BmcAI	AGTACT	1 cut(s)	2494
Bme1390I	CCNGG	3 cut(s)	401, 1057, 1370
Bme18I	GGWCC	1 cut(s)	275
BmgT120I	GGNCC	4 cut(s)	275, 766, 862, 1125
BmiI	GGNNCC	5 cut(s)	720, 768, 880, 1203, 2565
BmrFI	CCNGG	3 cut(s)	401, 1057, 1370
BmrI	ACTGGG	1 cut(s)	1386
BmsI	GCATC	9 cut(s)	159, 829, 1504, 1542, 1739, 1819, 1989, 2281, 2383
BmtI	GCTAGC	2 cut(s)	176, 180
BmuI	ACTGGG	1 cut(s)	1386
BoxI	GACNNNNGTC	1 cut(s)	1159
BpiI	GAAGAC	3 cut(s)	730, 938, 2645
BpmI	CTGGAG	2 cut(s)	41, 809
Bpu1102I	GCTNAGC	1 cut(s)	2705
BsaHI	GRCGYC	1 cut(s)	155
BsaJI	CCNNGG	1 cut(s)	1899
BsaWI	WCCGGW	1 cut(s)	240
BsaXI	ACNNNNNCTCC	2 cut(s)	14, 44
Bsc4I	CCNNNNNNNGG	3 cut(s)	339, 1375, 1563
Bse3DI	GCAATG	4 cut(s)	131, 554, 1839, 2601
BseAI	TCCGGA	1 cut(s)	240
BseBI	CCWGG	3 cut(s)	401, 1057, 1370
BseDI	CCNNGG	1 cut(s)	1899
BseGI	GGATG	2 cut(s)	373, 1282
BseLI	CCNNNNNNNGG	3 cut(s)	339, 1375, 1563
BseMI	GCAATG	4 cut(s)	131, 554, 1839, 2601
BseMII	CTCAG	5 cut(s)	270, 447, 1700, 2028, 2696
BsePI	GCGCGC	1 cut(s)	1589
BseRI	GAGGAG	1 cut(s)	1703
BseXI	GCAGC	6 cut(s)	235, 298, 829, 1143, 1441, 1740
BseYI	CCCAGC	1 cut(s)	1205
BsgI	GTGCAG	2 cut(s)	1292, 1938
Bsh1236I	CGCG	1 cut(s)	1591
BshFI	GGCC	7 cut(s)	26, 266, 767, 863, 1127, 1904, 2529
BshNI	GGYRCC	2 cut(s)	1201, 2563
BsiHKAI	GWGCWC	2 cut(s)	2230, 2284
BsiSI	CCGG	1 cut(s)	241
BslFI	GGGAC	2 cut(s)	658, 2867
BslI	CCNNNNNNNGG	3 cut(s)	339, 1375, 1563
BsmAI	GTCTC	2 cut(s)	525, 2157
BsmFI	GGGAC	2 cut(s)	658, 2867
BsmI	GAATGC	1 cut(s)	2348
BsnI	GGCC	7 cut(s)	26, 266, 767, 863, 1127, 1904, 2529
Bsp1286I	GDGCHC	4 cut(s)	73, 1381, 2230, 2284
Bsp13I	TCCGGA	1 cut(s)	240
Bsp1407I	TGTACA	1 cut(s)	42
Bsp1720I	GCTNAGC	1 cut(s)	2705
Bsp19I	CCATGG	1 cut(s)	1899
BspACI	CCGC	3 cut(s)	1388, 1517, 2788
BspANI	GGCC	7 cut(s)	26, 266, 767, 863, 1127, 1904, 2529
BspCNI	CTCAG	5 cut(s)	271, 448, 1701, 2029, 2697
BspEI	TCCGGA	1 cut(s)	240
BspFNI	CGCG	1 cut(s)	1591
BspHI	TCATGA	2 cut(s)	919, 1615
BspLI	GGNNCC	5 cut(s)	720, 768, 880, 1203, 2565
BspMAI	CTGCAG	2 cut(s)	1364, 2584
BspOI	GCTAGC	2 cut(s)	176, 180
BspT107I	GGYRCC	2 cut(s)	1201, 2563
BspTI	CTTAAG	1 cut(s)	1463
BsrDI	GCAATG	4 cut(s)	131, 554, 1839, 2601
BsrGI	TGTACA	1 cut(s)	42
BssECI	CCNNGG	1 cut(s)	1899
BssHII	GCGCGC	1 cut(s)	1589
BssNI	GRCGYC	1 cut(s)	155
BssT1I	CCWWGG	1 cut(s)	1899
Bst2UI	CCWGG	3 cut(s)	401, 1057, 1370
Bst4CI	ACNGT	7 cut(s)	682, 1158, 1562, 1774, 1801, 2672, 2878
Bst6I	CTCTTC	1 cut(s)	2160
BstACI	GRCGYC	1 cut(s)	155
BstAFI	CTTAAG	1 cut(s)	1463
BstAUI	TGTACA	1 cut(s)	42
BstDEI	CTNAG	8 cut(s)	279, 456, 1088, 1230, 1709, 2037, 2690, 2705
BstDSI	CCRYGG	1 cut(s)	1899
BstF5I	GGATG	2 cut(s)	373, 1282
BstFNI	CGCG	1 cut(s)	1591
BstHHI	GCGC	3 cut(s)	561, 1591, 1593
BstMAI	GTCTC	2 cut(s)	525, 2157
BstMWI	GCNNNNNNNGC	3 cut(s)	1118, 1430, 2432
BstNI	CCWGG	3 cut(s)	401, 1057, 1370
BstNSI	RCATGY	2 cut(s)	1387, 1963
BstPAI	GACNNNNGTC	1 cut(s)	1159
BstSCI	CCNGG	3 cut(s)	399, 1055, 1368
BstSFI	CTRYAG	2 cut(s)	1360, 2580
BstUI	CGCG	1 cut(s)	1591
BstV1I	GCAGC	6 cut(s)	235, 298, 829, 1143, 1441, 1740
BstV2I	GAAGAC	3 cut(s)	730, 938, 2645
BstX2I	RGATCY	6 cut(s)	540, 687, 718, 1280, 1882, 2513
BstXI	CCANNNNNNTGG	1 cut(s)	699
BstYI	RGATCY	6 cut(s)	540, 687, 718, 1280, 1882, 2513
BsuI	GTATCC	4 cut(s)	1730, 1762, 1959, 2479
BsuRI	GGCC	7 cut(s)	26, 266, 767, 863, 1127, 1904, 2529
BtgI	CCRYGG	1 cut(s)	1899
BtsCI	GGATG	2 cut(s)	373, 1282
BtsI	GCAGTG	1 cut(s)	1141
CciI	TCATGA	2 cut(s)	919, 1615
CfoI	GCGC	3 cut(s)	561, 1591, 1593
Cfr13I	GGNCC	4 cut(s)	275, 766, 862, 1125
CseI	GACGC	1 cut(s)	163
Csp6I	GTAC	9 cut(s)	43, 133, 678, 1141, 1181, 1479, 1568, 2045, 2493
CspCI	CAANNNNNGTGG	2 cut(s)	1953, 1988
CviQI	GTAC	9 cut(s)	43, 133, 678, 1141, 1181, 1479, 1568, 2045, 2493
DdeI	CTNAG	8 cut(s)	279, 456, 1088, 1230, 1709, 2037, 2690, 2705
DrdI	GACNNNNNNGTC	1 cut(s)	1412
DseDI	GACNNNNNNGTC	1 cut(s)	1412
EaeI	YGGCCR	2 cut(s)	264, 1902
Eam1104I	CTCTTC	1 cut(s)	2160
EarI	CTCTTC	1 cut(s)	2160
Ecl136II	GAGCTC	1 cut(s)	2228
Eco130I	CCWWGG	1 cut(s)	1899
Eco147I	AGGCCT	1 cut(s)	26
Eco24I	GRGCYC	3 cut(s)	73, 1381, 2230
Eco32I	GATATC	2 cut(s)	238, 2379
Eco47I	GGWCC	1 cut(s)	275
Eco53kI	GAGCTC	1 cut(s)	2228
Eco57I	CTGAAG	4 cut(s)	492, 1269, 1313, 2657
EcoICRI	GAGCTC	1 cut(s)	2228
EcoO109I	RGGNCCY	2 cut(s)	275, 766
EcoRII	CCWGG	3 cut(s)	399, 1055, 1368
EcoRV	GATATC	2 cut(s)	238, 2379
EcoT14I	CCWWGG	1 cut(s)	1899
EcoT22I	ATGCAT	2 cut(s)	1864, 2505
EcoT38I	GRGCYC	3 cut(s)	73, 1381, 2230
ErhI	CCWWGG	1 cut(s)	1899
FalI	AAGNNNNNCTT	2 cut(s)	1413, 1445
FaqI	GGGAC	2 cut(s)	658, 2867
FbaI	TGATCA	4 cut(s)	205, 412, 916, 1618
Fnu4HI	GCNGC	8 cut(s)	224, 287, 843, 1132, 1388, 1455, 1754, 2789
FokI	GGATG	2 cut(s)	380, 1289
FriOI	GRGCYC	3 cut(s)	73, 1381, 2230
Fsp4HI	GCNGC	8 cut(s)	224, 287, 843, 1132, 1388, 1455, 1754, 2789
FspBI	CTAG	8 cut(s)	173, 177, 183, 270, 1164, 1310, 2540, 2829
GlaI	GCGC	3 cut(s)	560, 1590, 1592
GluI	GCNGC	8 cut(s)	224, 287, 843, 1132, 1388, 1455, 1754, 2789
GsaI	CCCAGC	1 cut(s)	1209
GsuI	CTGGAG	2 cut(s)	41, 809
HaeIII	GGCC	7 cut(s)	26, 266, 767, 863, 1127, 1904, 2529
HapII	CCGG	1 cut(s)	241
HgaI	GACGC	1 cut(s)	163
HhaI	GCGC	3 cut(s)	561, 1591, 1593
Hin1I	GRCGYC	1 cut(s)	155
Hin6I	GCGC	3 cut(s)	559, 1589, 1591
HinP1I	GCGC	3 cut(s)	559, 1589, 1591
HincII	GTYRAC	2 cut(s)	1066, 2248
HindII	GTYRAC	2 cut(s)	1066, 2248
HpaII	CCGG	1 cut(s)	241
HphI	GGTGA	3 cut(s)	322, 1183, 2774
HpyAV	CCTTC	6 cut(s)	485, 485, 732, 992, 1054, 2191
HpyCH4III	ACNGT	7 cut(s)	682, 1158, 1562, 1774, 1801, 2672, 2878
HpyCH4IV	ACGT	3 cut(s)	955, 1922, 2163
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1118, 1430, 2432
HpyF3I	CTNAG	8 cut(s)	279, 456, 1088, 1230, 1709, 2037, 2690, 2705
HpySE526I	ACGT	3 cut(s)	955, 1922, 2163
Hsp92I	GRCGYC	1 cut(s)	155
HspAI	GCGC	3 cut(s)	559, 1589, 1591
Kpn2I	TCCGGA	1 cut(s)	240
Ksp22I	TGATCA	4 cut(s)	205, 412, 916, 1618
LmnI	GCTCC	3 cut(s)	243, 1723, 2832
Lsp1109I	GCAGC	6 cut(s)	235, 298, 829, 1143, 1441, 1740
LweI	GCATC	9 cut(s)	159, 829, 1504, 1542, 1739, 1819, 1989, 2281, 2383
MaeI	CTAG	8 cut(s)	173, 177, 183, 270, 1164, 1310, 2540, 2829
MaeII	ACGT	3 cut(s)	955, 1922, 2163
MfeI	CAATTG	2 cut(s)	651, 1541
MflI	RGATCY	6 cut(s)	540, 687, 718, 1280, 1882, 2513
MhlI	GDGCHC	4 cut(s)	73, 1381, 2230, 2284
MlsI	TGGCCA	2 cut(s)	266, 1904
MluNI	TGGCCA	2 cut(s)	266, 1904
MlyI	GAGTC	6 cut(s)	50, 389, 1505, 2069, 2635, 2695
MmeI	TCCRAC	4 cut(s)	337, 1627, 1746, 2491
Mox20I	TGGCCA	2 cut(s)	266, 1904
Mph1103I	ATGCAT	2 cut(s)	1864, 2505
MroI	TCCGGA	1 cut(s)	240
MroXI	GAANNNNTTC	1 cut(s)	1326
MscI	TGGCCA	2 cut(s)	266, 1904
MslI	CAYNNNNRTG	1 cut(s)	790
Msp20I	TGGCCA	2 cut(s)	266, 1904
MspA1I	CMGCKG	1 cut(s)	2788
MspCI	CTTAAG	1 cut(s)	1463
MspI	CCGG	1 cut(s)	241
MspR9I	CCNGG	3 cut(s)	401, 1057, 1370
MunI	CAATTG	2 cut(s)	651, 1541
Mva1269I	GAATGC	1 cut(s)	2348
MvaI	CCWGG	3 cut(s)	401, 1057, 1370
MvnI	CGCG	1 cut(s)	1591
MwoI	GCNNNNNNNGC	3 cut(s)	1118, 1430, 2432
NcoI	CCATGG	1 cut(s)	1899
NheI	GCTAGC	2 cut(s)	172, 176
NlaIV	GGNNCC	5 cut(s)	720, 768, 880, 1203, 2565
NmuCI	GTSAC	6 cut(s)	199, 1007, 1171, 1403, 1497, 1700
NsiI	ATGCAT	2 cut(s)	1864, 2505
NspI	RCATGY	2 cut(s)	1387, 1963
OliI	CACNNNNGTG	1 cut(s)	790
PaeI	GCATGC	1 cut(s)	1387
PagI	TCATGA	2 cut(s)	919, 1615
PauI	GCGCGC	1 cut(s)	1589
PceI	AGGCCT	1 cut(s)	26
PctI	GAATGC	1 cut(s)	2348
PdmI	GAANNNNTTC	1 cut(s)	1326
PfoI	TCCNGGA	2 cut(s)	1055, 1368
PkrI	GCNGC	8 cut(s)	225, 288, 844, 1133, 1389, 1456, 1755, 2790
PleI	GAGTC	6 cut(s)	50, 388, 1504, 2069, 2635, 2694
PpsI	GAGTC	6 cut(s)	50, 388, 1504, 2069, 2635, 2694
PpuMI	RGGWCCY	1 cut(s)	275
PshAI	GACNNNNGTC	1 cut(s)	1159
PshBI	ATTAAT	2 cut(s)	1548, 1865
Psp124BI	GAGCTC	1 cut(s)	2230
Psp1406I	AACGTT	2 cut(s)	1922, 2163
Psp5II	RGGWCCY	1 cut(s)	275
Psp6I	CCWGG	3 cut(s)	399, 1055, 1368
PspFI	CCCAGC	1 cut(s)	1205
PspGI	CCWGG	3 cut(s)	399, 1055, 1368
PspN4I	GGNNCC	5 cut(s)	720, 768, 880, 1203, 2565
PspPI	GGNCC	4 cut(s)	275, 766, 862, 1125
PspPPI	RGGWCCY	1 cut(s)	275
PsrI	GAACNNNNNNTAC	2 cut(s)	98, 130
PstI	CTGCAG	2 cut(s)	1364, 2584
PsuI	RGATCY	6 cut(s)	540, 687, 718, 1280, 1882, 2513
PteI	GCGCGC	1 cut(s)	1589
RsaI	GTAC	9 cut(s)	44, 134, 679, 1142, 1182, 1480, 1569, 2046, 2494
RsaNI	GTAC	9 cut(s)	43, 133, 678, 1141, 1181, 1479, 1568, 2045, 2493
RseI	CAYNNNNRTG	1 cut(s)	790
SacI	GAGCTC	1 cut(s)	2230
SatI	GCNGC	8 cut(s)	224, 287, 843, 1132, 1388, 1455, 1754, 2789
Sau96I	GGNCC	4 cut(s)	275, 766, 862, 1125
ScaI	AGTACT	1 cut(s)	2494
SchI	GAGTC	6 cut(s)	50, 389, 1505, 2069, 2635, 2695
ScrFI	CCNGG	3 cut(s)	401, 1057, 1370
SduI	GDGCHC	4 cut(s)	73, 1381, 2230, 2284
SfaNI	GCATC	9 cut(s)	159, 829, 1504, 1542, 1739, 1819, 1989, 2281, 2383
SfcI	CTRYAG	2 cut(s)	1360, 2580
SinI	GGWCC	1 cut(s)	275
SmiMI	CAYNNNNRTG	1 cut(s)	790
SmlI	CTYRAG	1 cut(s)	1463
SmoI	CTYRAG	1 cut(s)	1463
SphI	GCATGC	1 cut(s)	1387
SseBI	AGGCCT	1 cut(s)	26
SsiI	CCGC	3 cut(s)	1388, 1517, 2788
SspI	AATATT	2 cut(s)	534, 1108
SspMI	CTAG	8 cut(s)	173, 177, 183, 270, 1164, 1310, 2540, 2829
SstI	GAGCTC	1 cut(s)	2230
StuI	AGGCCT	1 cut(s)	26
StyD4I	CCNGG	3 cut(s)	399, 1055, 1368
StyI	CCWWGG	1 cut(s)	1899
TaaI	ACNGT	7 cut(s)	682, 1158, 1562, 1774, 1801, 2672, 2878
TaiI	ACGT	3 cut(s)	958, 1925, 2166
TaqI	TCGA	5 cut(s)	489, 1018, 1256, 1815, 2664
TatI	WGTACW	6 cut(s)	42, 132, 1140, 1478, 2044, 2492
TauI	GCSGC	2 cut(s)	1390, 2791
TseFI	GTSAC	6 cut(s)	199, 1007, 1171, 1403, 1497, 1700
TseI	GCWGC	6 cut(s)	223, 286, 842, 1131, 1454, 1753
Tsp45I	GTSAC	6 cut(s)	199, 1007, 1171, 1403, 1497, 1700
TspDTI	ATGAA	8 cut(s)	401, 476, 672, 1237, 1433, 1604, 2020, 2350
TspGWI	ACGGA	1 cut(s)	2342
Vha464I	CTTAAG	1 cut(s)	1463
VpaK11BI	GGWCC	1 cut(s)	275
VspI	ATTAAT	2 cut(s)	1548, 1865
XapI	RAATTY	4 cut(s)	671, 1220, 1778, 2027
XbaI	TCTAGA	2 cut(s)	1163, 2539
XceI	RCATGY	2 cut(s)	1387, 1963
XmnI	GAANNNNTTC	1 cut(s)	1326
XspI	CTAG	8 cut(s)	173, 177, 183, 270, 1164, 1310, 2540, 2829
ZrmI	AGTACT	1 cut(s)	2494
Zsp2I	ATGCAT	2 cut(s)	1864, 2505

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.