FvH4_7g24020

No description available

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
Physical Location & Seq
Reverse (-)
18601662 .. 18607312
5651 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g24020.t2

Sequence Viewer

Length: 2289 bp
ATGACCGGTGGTCCTAGAAACGAAGACTTTCACAACGACGAGATCGACGGCGCCAATCGCATTTCCGATCGGTCGAACGCCGAGGGATTCGAGGACTCGTCGGCCGCGAACGAGGTCGGGAGCTCCGGCGAGGGAGCGACGTCGTCGCGGAGTGAGATTGGGCTGGAAGAGCGGTTGACGGGGATACTTGTTGACGGAGGAGATGGAGATCTGTTGCTGCAGCAGAGCAATAGAGAGGACCGGGTTTTGCAGTGGCTTCAAGCGCTTGATATGCAGGTTATGGGCGCGTGTCGCGCAGACGAGAGGTTGAAGCCTTTGTTGAAGATGAATGCCTCAAATGACGCCGCCGAGGGTCGGTTGCTGGCTCAATTGACACAGCATTTTGAGCCGGCGGAAGTTGGAATGCTAGCGAGGTGCTTCTGCATACCGCTTGTATCTGTTCGTGTTGGAAAGATCAACAAGCAAGGGATTCTCTTGTGCCCTACTAATTCAAAGGGTAATTTAAATCTTACAATCTTGCCAACATCCGATCTACGTCTTTCATTTGTTGGGGATGATGGGCAGACTGATAGATTATTCACCTTAAATAGCAAATCCCAGTGCTCTGCTGTAGAAGTCAATGAGATTCCAGCAGACAATTCTGGCCGGTCTTTCGTTATCAAAATCCCAGATGGTCGGGTGTTTCACTTTTGGTGCTCTGAGACATCAAAGCTTTTGGGAATTGAATTGATTTCAAAGATGAAGGATCTGATCAGGAGGAAACCCTCCATTTCCGAATTAACTGGAATCAGCGAGTCACGTCTTGGTTACTTTGCAACTCACCTTCGTGCCTATCTGGTAGGTTCAACTGTGGTTGGAAGTGGATCAAGTTCTGCACCCTTAAATATGGATGCTAATACCACCAGTATTGAGCGATATGATACTGCTCAAGATGGACAACTCTCATCAACATCATCAAAGTCGCTGCGTTCTCGACTTAATGTGAATCAGTCGATGAAGGCAAATTCATCGTTTCAGGGTAGCCTGAGTCCAAGGTTGAGCTCTTTCAAAGAGGGTCTCCCCAGAACCTTGTCGTCACTGAGGAATATAAGCAGGGAAAAGTTGAGGAGGCGAGGGGACATTTACCTTTCAGCGGTTGATGACTCCACAATCGTTTCACCAGTGGCAGTCAATGCATCTTGTTCAAATCAATCTGAAAGTGACAAGGGTCCAGAAGTTGTCGCAAGTTGCTCATTATCTTCATCAAGTTTTCTGGAGTCACTTGGAAAATTGACTGTCCAACCAACCCTGAACTCTGCATCTCAAATTTCATACATGGCTAGTCCTCTTTTGTCTCCTTACTATTGTTGGTGCCCTCCCGGATCGTCGGGTTTGCAGTACTCACAAGAACCTCCAGCAATCTCTGGCTCATCCAGTGAATCAGCTTTTCTCCCACCACTTTCTTCTTTATTACCTGCCAATATGCCCTCCTGTATGTTGACAGCAAAGCCAACAGTTAATTTGTCTGATTGTCCTTTATTGGATTTCCCTGCCTTTCTTCCAGACCCACTCATCCGGTTGCCAAGGCCAACTTCTCAGCAGATCCCAACCTTCAATCCTTTGATTTGTGATCCGATTGTTCACATTCCAGTAATTGATATTTGCTCTTCCGGTCAAGGCTACCTTGTCAGTGCCGGTCCTGCTATTTCAACTGGCATTCCTCCATTGCACTCGAACCTTATGAATCCGTTAATTCCTCAAACTGATTCCATGTTGGAGAATGGTGCTAGAGAGACTCTGCGTCGGCTGCTCATAAGTGGTTCAACCCAGAGTAGCTCACCGCTGATGGATGTACTGCCTGCCATGTTCACAAATGGAGATGAGAATAGAAATATGCTTGTTGCTGGAAGCCGGGGTCTATACTCTGGAACCAGTGATGTTGATGTAATTGCAAATAGCATTGCAGCCATGAGTATGGTTTCACTGCCTGGGAGTCGGGGTCTATACACCGGAACCAGCGATGTTGATGTAATTGCAAACAGCATTGCAGCCATGAGTATGGTTTCACTGCCTGGGAGTCGGGGTCTATACACCGGAACCAGCGATGTTGATGTAATTGCAAACAGCATTGCAGCCATGAGTATGGTTTCACTGCCTGGGATATCTACCGGTGGAACTGTGTTGGAGAATCGTGGCGGCAGCAACGGTTTTGATATACAGGAAGAGGGATGTAGTGGATTGGGTGGATCTTGTTCTGAAGATCAGGGTACCTTTTGTTCGAACTATGGGGTGAAAAGGAGCGATGAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

763

Amino Acids

80.9

Weight (kDa)

4.96

Isoelectric Point (pI)

50.87

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 143
Acc36I ACCTGC 2 cut(s) 265, 1462
Acc65I GGTACC 1 cut(s) 2246
AccB1I GGYRCC 3 cut(s) 50, 1350, 2246
AccBSI CCGCTC 1 cut(s) 172
AccII CGCG 4 cut(s) 107, 148, 287, 294
AciI CCGC 9 cut(s) 105, 148, 172, 345, 392, 428, 1133, 1820, 2175
AclWI GGATC 6 cut(s) 753, 871, 1369, 1576, 1604, 2233
AcoI YGGCCR 2 cut(s) 102, 643
AcsI RAATTY 2 cut(s) 1003, 1305
AcuI CTGAAG 1 cut(s) 2256
AcyI GRCGYC 3 cut(s) 51, 140, 342
AfaI GTAC 3 cut(s) 1379, 1833, 2248
AfeI AGCGCT 1 cut(s) 264
AfiI CCNNNNNNNGG 2 cut(s) 354, 1132
AgeI ACCGGT 2 cut(s) 5, 2147
AhdI GACNNNNNGTC 2 cut(s) 9, 1779
AjiI CACGTC 1 cut(s) 800
AjnI CCWGG 3 cut(s) 1966, 2050, 2134
AjuI GAANNNNNNNTTGG 2 cut(s) 1555, 1587
AleI CACNNNNGTG 1 cut(s) 825
AluBI AGCT 5 cut(s) 123, 712, 1041, 1424, 1815
AluI AGCT 5 cut(s) 123, 712, 1041, 1424, 1815
Alw21I GWGCWC 4 cut(s) 125, 605, 698, 1043
Alw26I GTCTC 4 cut(s) 695, 1061, 1338, 1766
AlwI GGATC 6 cut(s) 753, 871, 1369, 1576, 1604, 2233
Aor51HI AGCGCT 1 cut(s) 264
AoxI GGCC 3 cut(s) 102, 643, 1565
ApeKI GCWGC 8 cut(s) 217, 220, 964, 1786, 1943, 2027, 2111, 2178
ApoI RAATTY 2 cut(s) 1003, 1305
AsiGI ACCGGT 2 cut(s) 5, 2147
Asp700I GAANNNNTTC 1 cut(s) 27
Asp718I GGTACC 1 cut(s) 2246
AspLEI GCGC 4 cut(s) 53, 265, 287, 296
AspS9I GGNCC 4 cut(s) 11, 238, 1208, 1676
AsuC2I CCSGG 3 cut(s) 242, 1359, 1892
AsuHPI GGTGA 5 cut(s) 571, 812, 1149, 1809, 2281
AsuII TTCGAA 1 cut(s) 2258
AsuNHI GCTAGC 1 cut(s) 406
AvaII GGWCC 4 cut(s) 11, 238, 1208, 1676
BaeGI GKGCMC 2 cut(s) 482, 1355
BanI GGYRCC 3 cut(s) 50, 1350, 2246
BanII GRGCYC 2 cut(s) 125, 1043
BbsI GAAGAC 1 cut(s) 30
Bbv12I GWGCWC 4 cut(s) 125, 605, 698, 1043
BbvI GCAGC 8 cut(s) 204, 232, 951, 1773, 1955, 2039, 2123, 2190
BccI CCATC 5 cut(s) 197, 551, 665, 926, 1819
BceAI ACGGC 1 cut(s) 64
BcgI CGANNNNNNTGC 2 cut(s) 990, 1024
BciT130I CCWGG 3 cut(s) 1968, 2052, 2136
BciVI GTATCC 1 cut(s) 177
BclI TGATCA 1 cut(s) 750
BcnI CCSGG 3 cut(s) 242, 1359, 1892
BcoDI GTCTC 4 cut(s) 695, 1061, 1338, 1766
BfaI CTAG 4 cut(s) 15, 407, 1320, 1767
BfmI CTRYAG 2 cut(s) 218, 609
BfoI RGCGCY 2 cut(s) 54, 266
BfuAI ACCTGC 2 cut(s) 265, 1462
BfuI GTATCC 1 cut(s) 177
BglII AGATCT 1 cut(s) 208
BmcAI AGTACT 1 cut(s) 1379
Bme1390I CCNGG 6 cut(s) 242, 1359, 1892, 1968, 2052, 2136
Bme18I GGWCC 4 cut(s) 11, 238, 1208, 1676
BmeRI GACNNNNNGTC 2 cut(s) 9, 1779
BmgBI CACGTC 1 cut(s) 800
BmgT120I GGNCC 4 cut(s) 11, 238, 1208, 1676
BmiI GGNNCC 7 cut(s) 52, 1209, 1352, 1909, 1993, 2077, 2248
BmrFI CCNGG 6 cut(s) 242, 1359, 1892, 1968, 2052, 2136
BmrI ACTGGG 1 cut(s) 592
BmsI GCATC 3 cut(s) 880, 1184, 1307
BmtI GCTAGC 1 cut(s) 410
BmuI ACTGGG 1 cut(s) 592
BoxI GACNNNNGTC 1 cut(s) 1206
BpiI GAAGAC 1 cut(s) 30
BpmI CTGGAG 2 cut(s) 1274, 1377
Bpu14I TTCGAA 1 cut(s) 2258
BpuEI CTTGAG 1 cut(s) 912
BpuMI CCSGG 3 cut(s) 242, 1359, 1892
BsaBI GATNNNNATC 1 cut(s) 207
BsaHI GRCGYC 3 cut(s) 51, 140, 342
BsaI GGTCTC 1 cut(s) 1061
BsaJI CCNNGG 8 cut(s) 81, 348, 1031, 1562, 1891, 1967, 2051, 2135
BsaWI WCCGGW 6 cut(s) 5, 1554, 1649, 1988, 2072, 2147
BsaXI ACNNNNNCTCC 4 cut(s) 1963, 1993, 2047, 2077
Bsc4I CCNNNNNNNGG 2 cut(s) 354, 1132
Bse118I RCCGGY 5 cut(s) 5, 388, 645, 1673, 2147
Bse1I ACTGG 8 cut(s) 598, 787, 903, 1160, 1413, 1628, 1696, 1911
Bse3DI GCAATG 4 cut(s) 1703, 1938, 2022, 2106
Bse8I GATNNNNATC 1 cut(s) 207
BseBI CCWGG 3 cut(s) 1968, 2052, 2136
BseDI CCNNGG 8 cut(s) 81, 348, 1031, 1562, 1891, 1967, 2051, 2135
BseGI GGATG 7 cut(s) 524, 559, 895, 1409, 1551, 1834, 2213
BseJI GATNNNNATC 1 cut(s) 207
BseLI CCNNNNNNNGG 2 cut(s) 354, 1132
BseMI GCAATG 4 cut(s) 1703, 1938, 2022, 2106
BseMII CTCAG 4 cut(s) 690, 1016, 1070, 1589
BseNI ACTGG 8 cut(s) 598, 787, 903, 1160, 1413, 1628, 1696, 1911
BseRI GAGGAG 2 cut(s) 213, 1120
BseSI GKGCMC 2 cut(s) 482, 1355
BseX3I CGGCCG 1 cut(s) 102
BseXI GCAGC 8 cut(s) 204, 232, 951, 1773, 1955, 2039, 2123, 2190
BsgI GTGCAG 1 cut(s) 858
Bsh1236I CGCG 4 cut(s) 107, 148, 287, 294
Bsh1285I CGRYCG 3 cut(s) 70, 74, 105
BshFI GGCC 3 cut(s) 104, 645, 1567
BshNI GGYRCC 3 cut(s) 50, 1350, 2246
BshTI ACCGGT 2 cut(s) 5, 2147
BsiEI CGRYCG 3 cut(s) 70, 74, 105
BsiHKAI GWGCWC 4 cut(s) 125, 605, 698, 1043
BslFI GGGAC 1 cut(s) 1130
BslI CCNNNNNNNGG 2 cut(s) 354, 1132
BsmAI GTCTC 4 cut(s) 695, 1061, 1338, 1766
BsmFI GGGAC 1 cut(s) 1130
BsmI GAATGC 3 cut(s) 334, 408, 1695
BsnI GGCC 3 cut(s) 104, 645, 1567
Bso31I GGTCTC 1 cut(s) 1061
Bsp119I TTCGAA 1 cut(s) 2258
Bsp1286I GDGCHC 6 cut(s) 125, 482, 605, 698, 1043, 1355
BspACI CCGC 9 cut(s) 105, 148, 172, 345, 392, 428, 1133, 1820, 2175
BspANI GGCC 3 cut(s) 104, 645, 1567
BspCNI CTCAG 4 cut(s) 691, 1017, 1071, 1588
BspFNI CGCG 4 cut(s) 107, 148, 287, 294
BspLI GGNNCC 7 cut(s) 52, 1209, 1352, 1909, 1993, 2077, 2248
BspMAI CTGCAG 1 cut(s) 222
BspMI ACCTGC 2 cut(s) 265, 1462
BspOI GCTAGC 1 cut(s) 410
BspPI GGATC 6 cut(s) 753, 871, 1369, 1576, 1604, 2233
BspQI GCTCTTC 2 cut(s) 162, 1651
BspT104I TTCGAA 1 cut(s) 2258
BspT107I GGYRCC 3 cut(s) 50, 1350, 2246
BspTNI GGTCTC 1 cut(s) 1061
BsrBI CCGCTC 1 cut(s) 172
BsrDI GCAATG 4 cut(s) 1703, 1938, 2022, 2106
BsrFI RCCGGY 5 cut(s) 5, 388, 645, 1673, 2147
BsrI ACTGG 8 cut(s) 598, 787, 903, 1160, 1413, 1628, 1696, 1911
BssAI RCCGGY 5 cut(s) 5, 388, 645, 1673, 2147
BssECI CCNNGG 8 cut(s) 81, 348, 1031, 1562, 1891, 1967, 2051, 2135
BssNI GRCGYC 3 cut(s) 51, 140, 342
BssT1I CCWWGG 2 cut(s) 1031, 1562
Bst2UI CCWGG 3 cut(s) 1968, 2052, 2136
Bst4CI ACNGT 5 cut(s) 850, 1276, 1495, 2158, 2186
Bst6I CTCTTC 3 cut(s) 162, 1651, 2196
BstACI GRCGYC 3 cut(s) 51, 140, 342
BstAPI GCANNNNNTGC 1 cut(s) 1172
BstBI TTCGAA 1 cut(s) 2258
BstC8I GCNNGC 4 cut(s) 363, 390, 408, 1839
BstDEI CTNAG 4 cut(s) 699, 1025, 1079, 1575
BstF5I GGATG 7 cut(s) 524, 559, 895, 1409, 1551, 1834, 2213
BstFNI CGCG 4 cut(s) 107, 148, 287, 294
BstH2I RGCGCY 2 cut(s) 54, 266
BstHHI GCGC 4 cut(s) 53, 265, 287, 296
BstMAI GTCTC 4 cut(s) 695, 1061, 1338, 1766
BstMCI CGRYCG 3 cut(s) 70, 74, 105
BstNI CCWGG 3 cut(s) 1968, 2052, 2136
BstPAI GACNNNNGTC 1 cut(s) 1206
BstSCI CCNGG 6 cut(s) 240, 1357, 1890, 1966, 2050, 2134
BstSFI CTRYAG 2 cut(s) 218, 609
BstSLI GKGCMC 2 cut(s) 482, 1355
BstUI CGCG 4 cut(s) 107, 148, 287, 294
BstV1I GCAGC 8 cut(s) 204, 232, 951, 1773, 1955, 2039, 2123, 2190
BstV2I GAAGAC 1 cut(s) 30
BstX2I RGATCY 4 cut(s) 208, 745, 1581, 2225
BstXI CCANNNNNNTGG 3 cut(s) 1954, 2038, 2122
BstYI RGATCY 4 cut(s) 208, 745, 1581, 2225
BstZI CGGCCG 1 cut(s) 102
BsuI GTATCC 1 cut(s) 177
BsuRI GGCC 3 cut(s) 104, 645, 1567
BtgZI GCGATG 2 cut(s) 2013, 2097
BtrI CACGTC 1 cut(s) 800
BtsCI GGATG 7 cut(s) 524, 559, 895, 1409, 1551, 1834, 2213
BtsI GCAGTG 4 cut(s) 257, 1961, 2045, 2129
BveI ACCTGC 2 cut(s) 265, 1462
Cac8I GCNNGC 4 cut(s) 363, 390, 408, 1839
CfoI GCGC 4 cut(s) 53, 265, 287, 296
Cfr10I RCCGGY 5 cut(s) 5, 388, 645, 1673, 2147
Cfr13I GGNCC 4 cut(s) 11, 238, 1208, 1676
CseI GACGC 2 cut(s) 350, 1769
Csp6I GTAC 3 cut(s) 1378, 1832, 2247
CspAI ACCGGT 2 cut(s) 5, 2147
CspCI CAANNNNNGTGG 2 cut(s) 889, 924
CviAII CATG 6 cut(s) 1315, 1750, 1843, 1948, 2032, 2116
CviQI GTAC 3 cut(s) 1378, 1832, 2247
DdeI CTNAG 4 cut(s) 699, 1025, 1079, 1575
DinI GGCGCC 1 cut(s) 52
DraI TTTAAA 1 cut(s) 504
DriI GACNNNNNGTC 2 cut(s) 9, 1779
EaeI YGGCCR 2 cut(s) 102, 643
EagI CGGCCG 1 cut(s) 102
Eam1104I CTCTTC 3 cut(s) 162, 1651, 2196
Eam1105I GACNNNNNGTC 2 cut(s) 9, 1779
EarI CTCTTC 3 cut(s) 162, 1651, 2196
EciI GGCGGA 1 cut(s) 407
Ecl136II GAGCTC 2 cut(s) 123, 1041
EclXI CGGCCG 1 cut(s) 102
Eco130I CCWWGG 2 cut(s) 1031, 1562
Eco24I GRGCYC 2 cut(s) 125, 1043
Eco31I GGTCTC 1 cut(s) 1061
Eco32I GATATC 1 cut(s) 2142
Eco47I GGWCC 4 cut(s) 11, 238, 1208, 1676
Eco47III AGCGCT 1 cut(s) 264
Eco52I CGGCCG 1 cut(s) 102
Eco53kI GAGCTC 2 cut(s) 123, 1041
Eco57I CTGAAG 1 cut(s) 2256
EcoICRI GAGCTC 2 cut(s) 123, 1041
EcoRII CCWGG 3 cut(s) 1966, 2050, 2134
EcoRV GATATC 1 cut(s) 2142
EcoT14I CCWWGG 2 cut(s) 1031, 1562
EcoT22I ATGCAT 1 cut(s) 1177
EcoT38I GRGCYC 2 cut(s) 125, 1043
EgeI GGCGCC 1 cut(s) 52
EheI GGCGCC 1 cut(s) 52
ErhI CCWWGG 2 cut(s) 1031, 1562
FaeI CATG 6 cut(s) 1318, 1753, 1846, 1951, 2035, 2119
FalI AAGNNNNNCTT 4 cut(s) 1555, 1587, 1647, 1679
FaqI GGGAC 1 cut(s) 1130
FatI CATG 6 cut(s) 1314, 1749, 1842, 1947, 2031, 2115
FbaI TGATCA 1 cut(s) 750
FokI GGATG 7 cut(s) 511, 566, 902, 1396, 1538, 1841, 2220
FriOI GRGCYC 2 cut(s) 125, 1043
FspBI CTAG 4 cut(s) 15, 407, 1320, 1767
GlaI GCGC 4 cut(s) 52, 264, 286, 295
GsuI CTGGAG 2 cut(s) 1274, 1377
HaeII RGCGCY 2 cut(s) 54, 266
HaeIII GGCC 3 cut(s) 104, 645, 1567
HgaI GACGC 2 cut(s) 350, 1769
HhaI GCGC 4 cut(s) 53, 265, 287, 296
Hin1I GRCGYC 3 cut(s) 51, 140, 342
Hin1II CATG 6 cut(s) 1318, 1753, 1846, 1951, 2035, 2119
Hin6I GCGC 4 cut(s) 51, 263, 285, 294
HinP1I GCGC 4 cut(s) 51, 263, 285, 294
HincII GTYRAC 3 cut(s) 177, 193, 1479
HindII GTYRAC 3 cut(s) 177, 193, 1479
HindIII AAGCTT 1 cut(s) 710
HphI GGTGA 5 cut(s) 571, 812, 1149, 1809, 2281
Hpy166II GTNNAC 5 cut(s) 177, 193, 1479, 1621, 1848
Hpy188I TCNGA 9 cut(s) 67, 529, 700, 750, 775, 1195, 1507, 1614, 2236
Hpy188III TCNNGA 8 cut(s) 118, 754, 929, 972, 1211, 1253, 1541, 1905
Hpy8I GTNNAC 5 cut(s) 177, 193, 1479, 1621, 1848
Hpy99I CGWCG 8 cut(s) 41, 50, 103, 142, 145, 148, 1369, 1785
HpyAV CCTTC 4 cut(s) 736, 833, 991, 1600
HpyCH4III ACNGT 5 cut(s) 850, 1276, 1495, 2158, 2186
HpyCH4IV ACGT 3 cut(s) 140, 535, 799
HpyF3I CTNAG 4 cut(s) 699, 1025, 1079, 1575
HpySE526I ACGT 3 cut(s) 140, 535, 799
Hsp92I GRCGYC 3 cut(s) 51, 140, 342
Hsp92II CATG 6 cut(s) 1318, 1753, 1846, 1951, 2035, 2119
HspAI GCGC 4 cut(s) 51, 263, 285, 294
KasI GGCGCC 1 cut(s) 50
KpnI GGTACC 1 cut(s) 2250
KroI GCCGGC 1 cut(s) 388
KroNI GCCGGC 1 cut(s) 390
Ksp22I TGATCA 1 cut(s) 750
LguI GCTCTTC 2 cut(s) 162, 1651
LmnI GCTCC 4 cut(s) 120, 128, 134, 2277
Lsp1109I GCAGC 8 cut(s) 204, 232, 951, 1773, 1955, 2039, 2123, 2190
LweI GCATC 3 cut(s) 880, 1184, 1307
MaeI CTAG 4 cut(s) 15, 407, 1320, 1767
MaeII ACGT 3 cut(s) 140, 535, 799
MaeIII GTNAC 5 cut(s) 795, 806, 1074, 1199, 1257
MbiI CCGCTC 1 cut(s) 172
MboII GAAGA 9 cut(s) 35, 179, 334, 1230, 1434, 1529, 1638, 2213, 2249
MfeI CAATTG 1 cut(s) 368
MflI RGATCY 4 cut(s) 208, 745, 1581, 2225
MhlI GDGCHC 6 cut(s) 125, 482, 605, 698, 1043, 1355
Mly113I GGCGCC 1 cut(s) 51
MlyI GAGTC 8 cut(s) 89, 803, 1036, 1136, 1265, 1768, 1981, 2065
MmeI TCCRAC 6 cut(s) 379, 427, 835, 1303, 1734, 2142
Mph1103I ATGCAT 1 cut(s) 1177
MroNI GCCGGC 1 cut(s) 388
MroXI GAANNNNTTC 1 cut(s) 27
MseI TTAA 7 cut(s) 503, 584, 779, 881, 978, 1497, 1730
MslI CAYNNNNRTG 4 cut(s) 825, 1952, 2036, 2120
MspA1I CMGCKG 2 cut(s) 1133, 1822
MspR9I CCNGG 6 cut(s) 242, 1359, 1892, 1968, 2052, 2136
MunI CAATTG 1 cut(s) 368
Mva1269I GAATGC 3 cut(s) 334, 408, 1695
MvaI CCWGG 3 cut(s) 1968, 2052, 2136
MvnI CGCG 4 cut(s) 107, 148, 287, 294
NaeI GCCGGC 1 cut(s) 390
NarI GGCGCC 1 cut(s) 51
NciI CCSGG 3 cut(s) 242, 1359, 1892
NgoMIV GCCGGC 1 cut(s) 388
NheI GCTAGC 1 cut(s) 406
NlaIII CATG 6 cut(s) 1318, 1753, 1846, 1951, 2035, 2119
NlaIV GGNNCC 7 cut(s) 52, 1209, 1352, 1909, 1993, 2077, 2248
NmeAIII GCCGAG 2 cut(s) 106, 373
NmuCI GTSAC 4 cut(s) 795, 1074, 1199, 1257
NsiI ATGCAT 1 cut(s) 1177
NspV TTCGAA 1 cut(s) 2258
OliI CACNNNNGTG 1 cut(s) 825
PciSI GCTCTTC 2 cut(s) 162, 1651
PcsI WCGNNNNNNNCGW 2 cut(s) 42, 104
PctI GAATGC 3 cut(s) 334, 408, 1695
PdiI GCCGGC 1 cut(s) 390
PdmI GAANNNNTTC 1 cut(s) 27
PfeI GAWTC 9 cut(s) 87, 469, 625, 786, 985, 1418, 1723, 1745, 2167
PflFI GACNNNGTC 1 cut(s) 142
PfoI TCCNGGA 1 cut(s) 1357
PinAI ACCGGT 2 cut(s) 5, 2147
Ple19I CGATCG 1 cut(s) 70
PleI GAGTC 8 cut(s) 89, 802, 1035, 1136, 1264, 1768, 1980, 2064
PluTI GGCGCC 1 cut(s) 54
PpsI GAGTC 8 cut(s) 89, 802, 1035, 1136, 1264, 1768, 1980, 2064
PshAI GACNNNNGTC 1 cut(s) 1206
Psp124BI GAGCTC 2 cut(s) 125, 1043
Psp6I CCWGG 3 cut(s) 1966, 2050, 2134
PspGI CCWGG 3 cut(s) 1966, 2050, 2134
PspN4I GGNNCC 7 cut(s) 52, 1209, 1352, 1909, 1993, 2077, 2248
PspPI GGNCC 4 cut(s) 11, 238, 1208, 1676
PsrI GAACNNNNNNTAC 2 cut(s) 2239, 2271
PstI CTGCAG 1 cut(s) 222
PsuI RGATCY 4 cut(s) 208, 745, 1581, 2225
PsyI GACNNNGTC 1 cut(s) 142
PvuI CGATCG 1 cut(s) 70
RsaI GTAC 3 cut(s) 1379, 1833, 2248
RsaNI GTAC 3 cut(s) 1378, 1832, 2247
RseI CAYNNNNRTG 4 cut(s) 825, 1952, 2036, 2120
SacI GAGCTC 2 cut(s) 125, 1043
SapI GCTCTTC 2 cut(s) 162, 1651
SaqAI TTAA 7 cut(s) 503, 584, 779, 881, 978, 1497, 1730
Sau96I GGNCC 4 cut(s) 11, 238, 1208, 1676
ScaI AGTACT 1 cut(s) 1379
SchI GAGTC 8 cut(s) 89, 803, 1036, 1136, 1265, 1768, 1981, 2065
ScrFI CCNGG 6 cut(s) 242, 1359, 1892, 1968, 2052, 2136
SduI GDGCHC 6 cut(s) 125, 482, 605, 698, 1043, 1355
SfaNI GCATC 3 cut(s) 880, 1184, 1307
SfcI CTRYAG 2 cut(s) 218, 609
SfoI GGCGCC 1 cut(s) 52
SfuI TTCGAA 1 cut(s) 2258
SinI GGWCC 4 cut(s) 11, 238, 1208, 1676
SmiI ATTTAAAT 1 cut(s) 504
SmiMI CAYNNNNRTG 4 cut(s) 825, 1952, 2036, 2120
SmlI CTYRAG 1 cut(s) 927
SmoI CTYRAG 1 cut(s) 927
SsiI CCGC 9 cut(s) 105, 148, 172, 345, 392, 428, 1133, 1820, 2175
SspDI GGCGCC 1 cut(s) 50
SspMI CTAG 4 cut(s) 15, 407, 1320, 1767
SstI GAGCTC 2 cut(s) 125, 1043
StyD4I CCNGG 6 cut(s) 240, 1357, 1890, 1966, 2050, 2134
StyI CCWWGG 2 cut(s) 1031, 1562
SwaI ATTTAAAT 1 cut(s) 504
TaaI ACNGT 5 cut(s) 850, 1276, 1495, 2158, 2186
TaiI ACGT 3 cut(s) 143, 538, 802
TaqI TCGA 7 cut(s) 45, 74, 90, 973, 992, 1712, 2258
TaqII GACCGA 1 cut(s) 60
TatI WGTACW 2 cut(s) 1377, 1831
TauI GCSGC 3 cut(s) 107, 347, 2178
TfiI GAWTC 9 cut(s) 87, 469, 625, 786, 985, 1418, 1723, 1745, 2167
Tru1I TTAA 7 cut(s) 503, 584, 779, 881, 978, 1497, 1730
Tru9I TTAA 7 cut(s) 503, 584, 779, 881, 978, 1497, 1730
TseFI GTSAC 4 cut(s) 795, 1074, 1199, 1257
TseI GCWGC 8 cut(s) 217, 220, 964, 1786, 1943, 2027, 2111, 2178
Tsp45I GTSAC 4 cut(s) 795, 1074, 1199, 1257
TspDTI ATGAA 8 cut(s) 341, 531, 755, 996, 1010, 1230, 1299, 1736
TspGWI ACGGA 2 cut(s) 210, 1716
Tth111I GACNNNGTC 1 cut(s) 142
VpaK11BI GGWCC 4 cut(s) 11, 238, 1208, 1676
XapI RAATTY 2 cut(s) 1003, 1305
XmnI GAANNNNTTC 1 cut(s) 27
XspI CTAG 4 cut(s) 15, 407, 1320, 1767
ZraI GACGTC 1 cut(s) 141
ZrmI AGTACT 1 cut(s) 1379
Zsp2I ATGCAT 1 cut(s) 1177
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.