Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr1

Orthogroup ID

OG0004441

Physical Location & Seq

Genomic Coordinates Reverse (-)

16133376 .. 16138294

Gene Structure 4919 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom01g16620.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2094 bp

ATGACTAACCATGGAGACCGAGATATAGACACGAACAACGAGATCAACGGCGGCGATCGCATTTCTGATCAATCGAACGGTGGGGAAATGGAGGACTTGTCGTCTTCGAACGGTGTGGAGAGCAACGGCGCTGGATCGGCGGCGAGGAGTGAGGCCGGGCTCGAGGAGCGGTTGACGGGGATACTTGTTGACGAAGGAGATGGAGATCTGTTGCTGCAGCAGAGCAATCGAGAGGACCGCGTTTTGCAGTGGCTACAAGCGCTTGATATGCAGGTTATGGGCGCGTGTCGCGTCGACGAGAGGTTGAAGCCGTTGTTGAAGATGAATGCGTCGAACGACATCGCAGAGGATCGATTGTTAGCTCAATTGAGCCAGCATTTCGAGCCGGCGGAAGTTGGAATGCTTGCGAGGTGCTTCTGTATACCTCTCGTATCTATTCGTGTGAGGACGATCAACAAGCAAGGGACTCTCTTGTGTCCCACTGCTGCTAGGGGCAATTTAAATCTTACAGTTTTGCCAACTTCAAATTTACGCCTTTCATTCGTTGGGGATGATGGTCGTATAGATAGACTGTGCACCTTACATAATAAATCCGAATGCTCTGCTGTAGAAGTCAATGAGATTCCAGCAGACAATTCTGGCCGATCTTTCCTTATTAAAATTCGAGATGACCGGATTTTTTACTTTTGGTGCTCTGAGACATCACGACTTTTGGGAATTGAATTGCTTTTGAAGATGAAGGATCTGCTCAAGAGGAAGCCCTCCATAGCTGAGTTAACTGGTATCAGTGAATCTCGCCTCGGTTGCTTTGCAACTCACCTACGTGCCTATCTGGTGGGATCAACAGCAGGTGCCAGTGCGTCAAGTTCTGCAGGCTCACCTTCTGATACGTATGCCACCACAGAACCATCTGATACAGCTCAACACGGACACTTCTCATCCACATCATCAAAATCCCTGCGTTCCCGACATGGTGTCAATCAATCAATGAAGGCAAATTCATCATTTCAGGGTAGCCTGAGTCCACGGTCGAGTTCCTTCAAAGATCTGCCCAGAACCTTGTCTTCACTAAGGAATATTACCAGGGAGAAGTTAAGGAAGCGAGGCGACATCTATCTTTCAGCCATTGACAACCCAACAGTTGCTTCACCAATCACAATCGATTCATCTTGTTCAAATCATGCCGAAAGTGACTGGTGTCCAGAACCTATTAGAAGTTGCTCGTTATCATCTTCAGGTTTCATAGAGTCACTAGGGAAAACCCGGAACCCTGCATCACCAGTTCCTTACATGGTTACCCCTTTGCTCTCTCCTTACTATTGTTGGTGCCCTCCAGGTTCGTCCGATTTGCAATACTCACCAGGAGTTCCTGAACTCCCCCGCTCATCGACAGAGTCAGCATTGCTTCCACCACTTTCGTCTTTATTACCACCCAATATGCCCTCCAGCATGTTGACAACAAAACCACCTCTTCATTTGGCTGATTCCCCCTTGCTTGATTTCCCTGCATTTCTCCCAGACCCACTGGTTAGGCTACCAAGGCCATCGTCTCAGCAGATCCCAACTTTCATACCCTTGATGTGCGACCCAATTGTTCACATTCCAGTTATTGATATTTGCTCGTCGGGTCAAGGATACTTGGTCAGCGCCGGTCCTGCTATTTCAACTGCCATATCTCCCCTGCACTCGAAGCTTGTGAACATTCCTGAAACTGATTCTATGCTGGAGAAGGGTGCCCGAGAGACACTACGACGACTTCTAATCAGTGGTTCAACCCAGAATAGCTCACAGCTGATGGATGTATTGCCTGCTATGATAACAAGTGCACACGAGAATCGCAACATGCTTGTTACTGGGAGCCGGGGTCTCTATAGCGGAACCAGGGACGTTGATGTCATTGCAAACAGCATTGCAGCCATGGGTCTGGTCTCTCTGCCTGGGATATCGAATATGGCAAGTGTTTTAGATAATCGTAGCGGCCGCGACAATTTTAACATACAGGAAGAGGGAACTAGTGGGCTGGAGGGATCTTGTTCGGAAGATAAGGGTACCGCCTGTTGTTCGGATTTTAGGGCGAAGAGGGCCGATGAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

698

Amino Acids

75.19

Weight (kDa)

5.54

Isoelectric Point (pI)

55.85

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004441)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G39950 AT2G39950 AT2G39950 AT2G39950 AT2G39950 AT2G39950 AT2G39950 AT2G39950 AT2G39950
fragaria_vesca	FvH4_7g24020 FvH4_7g24020 FvH4_7g24020
malus_domestica	MD01G1147200.v1.1
prunus_persica	Prupe.2G246100_v2.0.a1
pyrus_communis	pycom01g16620 pycom07g19650 pycom07g19670
rosa_chinensis	RchiOBHm_Chr1g0369361 RchiOBHm_Chr1g0369401
rosa_laevigata	RLG00000027133
rosa_multiflora	Rmu_co8268097.1_g000001 Rmu_sc0003612.1_g000020 Rmu_sc0006332.1_g000003
rosa_roxburghii	Rroxscaffold_4G00287680
rosa_rugosa	Rorug01G0349700 Rorug01G0349800
rosa_samantha	Rh1AG357200 Rh1AG357400 Rh1BG321400 Rh1CG335300 Rh1DG352100
rosa_wichuraiana	Rw1G031540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	839
AasI	GACNNNNNNGTC	1 cut(s)	1892
Acc36I	ACCTGC	2 cut(s)	262, 839
Acc65I	GGTACC	1 cut(s)	2048
AccB1I	GGYRCC	4 cut(s)	851, 1326, 1733, 2048
AccBSI	CCGCTC	2 cut(s)	169, 1383
AccI	GTMKAC	2 cut(s)	294, 421
AccII	CGCG	4 cut(s)	240, 284, 291, 1983
AclWI	GGATC	6 cut(s)	142, 357, 750, 847, 1552, 2035
AcoI	YGGCCR	2 cut(s)	640, 1978
AcsI	RAATTY	3 cut(s)	526, 660, 997
AcuI	CTGAAG	1 cut(s)	1218
AfaI	GTAC	1 cut(s)	2050
AfeI	AGCGCT	1 cut(s)	261
AgsI	TTSAA	9 cut(s)	307, 319, 525, 722, 733, 1042, 1176, 1665, 1773
AhdI	GACNNNNNGTC	2 cut(s)	100, 974
AhlI	ACTAGT	1 cut(s)	2012
AjnI	CCWGG	5 cut(s)	1082, 1333, 1360, 1880, 1936
AjuI	GAANNNNNNNTTGG	2 cut(s)	1129, 1161
AleI	CACNNNNGTG	1 cut(s)	822
AluBI	AGCT	6 cut(s)	362, 770, 920, 1693, 1785, 1792
AluI	AGCT	6 cut(s)	362, 770, 920, 1693, 1785, 1792
Alw21I	GWGCWC	3 cut(s)	578, 695, 1828
Alw26I	GTCTC	6 cut(s)	9, 692, 1554, 1736, 1871, 1933
Alw44I	GTGCAC	2 cut(s)	574, 1824
AlwI	GGATC	6 cut(s)	142, 357, 750, 847, 1552, 2035
Ama87I	CYCGRG	2 cut(s)	161, 1737
Aor51HI	AGCGCT	1 cut(s)	261
AoxI	GGCC	5 cut(s)	153, 640, 1541, 1978, 2082
ApaLI	GTGCAC	2 cut(s)	574, 1824
ApeKI	GCWGC	4 cut(s)	214, 217, 485, 1913
ApoI	RAATTY	3 cut(s)	526, 660, 997
AsiSI	GCGATCGC	1 cut(s)	58
Asp718I	GGTACC	1 cut(s)	2048
AspLEI	GCGC	4 cut(s)	131, 262, 284, 1649
AspS9I	GGNCC	3 cut(s)	235, 1652, 2082
AsuC2I	CCSGG	3 cut(s)	157, 1264, 1862
AsuHPI	GGTGA	5 cut(s)	809, 870, 1140, 1269, 1350
AsuII	TTCGAA	1 cut(s)	107
AvaI	CYCGRG	2 cut(s)	161, 1737
AvaII	GGWCC	2 cut(s)	235, 1652
BaeGI	GKGCMC	4 cut(s)	578, 1331, 1738, 1828
BanI	GGYRCC	4 cut(s)	851, 1326, 1733, 2048
BanII	GRGCYC	1 cut(s)	162
BauI	CACGAG	1 cut(s)	1829
BbsI	GAAGAC	2 cut(s)	96, 1056
Bbv12I	GWGCWC	3 cut(s)	578, 695, 1828
BbvI	GCAGC	4 cut(s)	201, 229, 472, 1925
BccI	CCATC	5 cut(s)	194, 548, 916, 1552, 1789
BceAI	ACGGC	3 cut(s)	64, 142, 295
BcgI	CGANNNNNNTGC	4 cut(s)	209, 243, 584, 618
BciT130I	CCWGG	5 cut(s)	1084, 1335, 1362, 1882, 1938
BciVI	GTATCC	2 cut(s)	174, 1628
BclI	TGATCA	1 cut(s)	67
BcnI	CCSGG	3 cut(s)	157, 1264, 1862
BcoDI	GTCTC	6 cut(s)	9, 692, 1554, 1736, 1871, 1933
BcuI	ACTAGT	1 cut(s)	2012
BfaI	CTAG	3 cut(s)	489, 1253, 2013
BfmI	CTRYAG	4 cut(s)	215, 606, 870, 1870
BfoI	RGCGCY	3 cut(s)	132, 263, 1650
BfuAI	ACCTGC	2 cut(s)	262, 839
BfuI	GTATCC	2 cut(s)	174, 1628
BglII	AGATCT	2 cut(s)	205, 1045
BisI	GCNGC	8 cut(s)	52, 141, 215, 218, 486, 1914, 1978, 1981
BlsI	GCNGC	8 cut(s)	53, 142, 216, 219, 487, 1915, 1979, 1982
Bme1390I	CCNGG	8 cut(s)	157, 1084, 1264, 1335, 1362, 1862, 1882, 1938
Bme18I	GGWCC	2 cut(s)	235, 1652
BmeRI	GACNNNNNGTC	2 cut(s)	100, 974
BmeT110I	CYCGRG	2 cut(s)	161, 1737
BmgT120I	GGNCC	3 cut(s)	235, 1652, 2082
BmiI	GGNNCC	7 cut(s)	853, 1268, 1328, 1735, 1859, 1879, 2050
BmrFI	CCNGG	8 cut(s)	157, 1084, 1264, 1335, 1362, 1862, 1882, 1938
BmrI	ACTGGG	1 cut(s)	1863
BmsI	GCATC	1 cut(s)	1283
BmuI	ACTGGG	1 cut(s)	1863
BoxI	GACNNNNGTC	1 cut(s)	1197
BpiI	GAAGAC	2 cut(s)	96, 1056
BpmI	CTGGAG	4 cut(s)	1317, 1429, 1745, 2042
Bpu14I	TTCGAA	1 cut(s)	107
BpuEI	CTTGAG	1 cut(s)	734
BpuMI	CCSGG	3 cut(s)	157, 1264, 1862
Bsa29I	ATCGAT	2 cut(s)	352, 1161
BsaAI	YACGTR	2 cut(s)	824, 891
BsaBI	GATNNNNATC	1 cut(s)	204
BsaI	GGTCTC	3 cut(s)	9, 1871, 1933
BsaJI	CCNNGG	9 cut(s)	10, 799, 1025, 1083, 1538, 1861, 1881, 1917, 1937
BsaWI	WCCGGW	1 cut(s)	672
BsaXI	ACNNNNNCTCC	4 cut(s)	83, 113, 1849, 1879
Bse118I	RCCGGY	2 cut(s)	385, 1649
Bse1I	ACTGG	7 cut(s)	784, 855, 1199, 1280, 1530, 1604, 1858
Bse3DI	GCAATG	3 cut(s)	1400, 1896, 1908
Bse8I	GATNNNNATC	1 cut(s)	204
BseBI	CCWGG	5 cut(s)	1084, 1335, 1362, 1882, 1938
BseCI	ATCGAT	2 cut(s)	352, 1161
BseDI	CCNNGG	9 cut(s)	10, 799, 1025, 1083, 1538, 1861, 1881, 1917, 1937
BseGI	GGATG	3 cut(s)	556, 938, 1804
BseJI	GATNNNNATC	1 cut(s)	204
BseMI	GCAATG	3 cut(s)	1400, 1896, 1908
BseMII	CTCAG	4 cut(s)	687, 762, 1010, 1565
BseNI	ACTGG	7 cut(s)	784, 855, 1199, 1280, 1530, 1604, 1858
BseRI	GAGGAG	2 cut(s)	160, 179
BseSI	GKGCMC	4 cut(s)	578, 1331, 1738, 1828
BseX3I	CGGCCG	1 cut(s)	1978
BseXI	GCAGC	4 cut(s)	201, 229, 472, 1925
BsgI	GTGCAG	1 cut(s)	1667
Bsh1236I	CGCG	4 cut(s)	240, 284, 291, 1983
Bsh1285I	CGRYCG	3 cut(s)	58, 1031, 1981
BshFI	GGCC	5 cut(s)	155, 642, 1543, 1980, 2084
BshNI	GGYRCC	4 cut(s)	851, 1326, 1733, 2048
BshVI	ATCGAT	2 cut(s)	352, 1161
BsiEI	CGRYCG	3 cut(s)	58, 1031, 1981
BsiHKAI	GWGCWC	3 cut(s)	578, 695, 1828
BsiHKCI	CYCGRG	2 cut(s)	161, 1737
BsiSI	CCGG	6 cut(s)	156, 386, 673, 1264, 1650, 1861
BslFI	GGGAC	3 cut(s)	462, 478, 1898
BsmAI	GTCTC	6 cut(s)	9, 692, 1554, 1736, 1871, 1933
BsmBI	CGTCTC	1 cut(s)	1554
BsmFI	GGGAC	3 cut(s)	462, 478, 1898
BsmI	GAATGC	3 cut(s)	331, 405, 602
BsnI	GGCC	5 cut(s)	155, 642, 1543, 1980, 2084
Bso31I	GGTCTC	3 cut(s)	9, 1871, 1933
BsoBI	CYCGRG	2 cut(s)	161, 1737
Bsp119I	TTCGAA	1 cut(s)	107
Bsp1286I	GDGCHC	6 cut(s)	162, 578, 695, 1331, 1738, 1828
Bsp19I	CCATGG	2 cut(s)	10, 1917
BspANI	GGCC	5 cut(s)	155, 642, 1543, 1980, 2084
BspCNI	CTCAG	4 cut(s)	688, 763, 1011, 1564
BspDI	ATCGAT	2 cut(s)	352, 1161
BspFNI	CGCG	4 cut(s)	240, 284, 291, 1983
BspLI	GGNNCC	7 cut(s)	853, 1268, 1328, 1735, 1859, 1879, 2050
BspMAI	CTGCAG	2 cut(s)	219, 874
BspMI	ACCTGC	2 cut(s)	262, 839
BspPI	GGATC	6 cut(s)	142, 357, 750, 847, 1552, 2035
BspT104I	TTCGAA	1 cut(s)	107
BspT107I	GGYRCC	4 cut(s)	851, 1326, 1733, 2048
BspTNI	GGTCTC	3 cut(s)	9, 1871, 1933
BsrBI	CCGCTC	2 cut(s)	169, 1383
BsrDI	GCAATG	3 cut(s)	1400, 1896, 1908
BsrFI	RCCGGY	2 cut(s)	385, 1649
BsrI	ACTGG	7 cut(s)	784, 855, 1199, 1280, 1530, 1604, 1858
BssAI	RCCGGY	2 cut(s)	385, 1649
BssECI	CCNNGG	9 cut(s)	10, 799, 1025, 1083, 1538, 1861, 1881, 1917, 1937
BssNAI	GTATAC	1 cut(s)	422
BssSI	CACGAG	1 cut(s)	1829
BssT1I	CCWWGG	3 cut(s)	10, 1538, 1917
Bst1107I	GTATAC	1 cut(s)	422
Bst2BI	CACGAG	1 cut(s)	1829
Bst2UI	CCWGG	5 cut(s)	1084, 1335, 1362, 1882, 1938
Bst4CI	ACNGT	6 cut(s)	80, 113, 511, 573, 1029, 1141
Bst6I	CTCTTC	3 cut(s)	1476, 1998, 2072
BstBAI	YACGTR	2 cut(s)	824, 891
BstBI	TTCGAA	1 cut(s)	107
BstC8I	GCNNGC	5 cut(s)	374, 387, 405, 874, 1809
BstDEI	CTNAG	5 cut(s)	696, 771, 1019, 1070, 1551
BstDSI	CCRYGG	3 cut(s)	10, 1025, 1917
BstEII	GGTNACC	1 cut(s)	1294
BstF5I	GGATG	3 cut(s)	556, 938, 1804
BstFNI	CGCG	4 cut(s)	240, 284, 291, 1983
BstH2I	RGCGCY	3 cut(s)	132, 263, 1650
BstHHI	GCGC	4 cut(s)	131, 262, 284, 1649
BstMAI	GTCTC	6 cut(s)	9, 692, 1554, 1736, 1871, 1933
BstMCI	CGRYCG	3 cut(s)	58, 1031, 1981
BstNI	CCWGG	5 cut(s)	1084, 1335, 1362, 1882, 1938
BstNSI	RCATGY	2 cut(s)	1453, 1846
BstPAI	GACNNNNGTC	1 cut(s)	1197
BstPI	GGTNACC	1 cut(s)	1294
BstSCI	CCNGG	8 cut(s)	155, 1082, 1262, 1333, 1360, 1860, 1880, 1936
BstSFI	CTRYAG	4 cut(s)	215, 606, 870, 1870
BstSLI	GKGCMC	4 cut(s)	578, 1331, 1738, 1828
BstSNI	TACGTA	1 cut(s)	891
BstUI	CGCG	4 cut(s)	240, 284, 291, 1983
BstV1I	GCAGC	4 cut(s)	201, 229, 472, 1925
BstV2I	GAAGAC	2 cut(s)	96, 1056
BstX2I	RGATCY	5 cut(s)	205, 742, 1045, 1557, 2027
BstXI	CCANNNNNNTGG	1 cut(s)	1924
BstYI	RGATCY	5 cut(s)	205, 742, 1045, 1557, 2027
BstZ17I	GTATAC	1 cut(s)	422
BstZI	CGGCCG	1 cut(s)	1978
Bsu15I	ATCGAT	2 cut(s)	352, 1161
BsuI	GTATCC	2 cut(s)	174, 1628
BsuRI	GGCC	5 cut(s)	155, 642, 1543, 1980, 2084
BsuTUI	ATCGAT	2 cut(s)	352, 1161
BtgI	CCRYGG	3 cut(s)	10, 1025, 1917
BtgZI	GCGATG	1 cut(s)	325
BtsCI	GGATG	3 cut(s)	556, 938, 1804
BtsI	GCAGTG	2 cut(s)	254, 480
BtsIMutI	CAGTG	6 cut(s)	254, 480, 793, 862, 1523, 1771
BveI	ACCTGC	2 cut(s)	262, 839
Cac8I	GCNNGC	5 cut(s)	374, 387, 405, 874, 1809
CciNI	GCGGCCGC	1 cut(s)	1978
CfoI	GCGC	4 cut(s)	131, 262, 284, 1649
Cfr10I	RCCGGY	2 cut(s)	385, 1649
Cfr13I	GGNCC	3 cut(s)	235, 1652, 2082
ClaI	ATCGAT	2 cut(s)	352, 1161
CseI	GACGC	3 cut(s)	280, 318, 849
Csp6I	GTAC	1 cut(s)	2049
CviAII	CATG	7 cut(s)	11, 971, 1181, 1291, 1450, 1843, 1918
CviQI	GTAC	1 cut(s)	2049
DdeI	CTNAG	5 cut(s)	696, 771, 1019, 1070, 1551
DraI	TTTAAA	1 cut(s)	501
DrdI	GACNNNNNNGTC	1 cut(s)	1892
DriI	GACNNNNNGTC	2 cut(s)	100, 974
DseDI	GACNNNNNNGTC	1 cut(s)	1892
EaeI	YGGCCR	2 cut(s)	640, 1978
EagI	CGGCCG	1 cut(s)	1978
Eam1104I	CTCTTC	3 cut(s)	1476, 1998, 2072
Eam1105I	GACNNNNNGTC	2 cut(s)	100, 974
EarI	CTCTTC	3 cut(s)	1476, 1998, 2072
EciI	GGCGGA	1 cut(s)	404
EclXI	CGGCCG	1 cut(s)	1978
Eco105I	TACGTA	1 cut(s)	891
Eco130I	CCWWGG	3 cut(s)	10, 1538, 1917
Eco24I	GRGCYC	1 cut(s)	162
Eco31I	GGTCTC	3 cut(s)	9, 1871, 1933
Eco32I	GATATC	1 cut(s)	1944
Eco47I	GGWCC	2 cut(s)	235, 1652
Eco47III	AGCGCT	1 cut(s)	261
Eco52I	CGGCCG	1 cut(s)	1978
Eco57I	CTGAAG	1 cut(s)	1218
Eco88I	CYCGRG	2 cut(s)	161, 1737
Eco91I	GGTNACC	1 cut(s)	1294
EcoO65I	GGTNACC	1 cut(s)	1294
EcoRII	CCWGG	5 cut(s)	1082, 1333, 1360, 1880, 1936
EcoRV	GATATC	1 cut(s)	1944
EcoT14I	CCWWGG	3 cut(s)	10, 1538, 1917
EcoT38I	GRGCYC	1 cut(s)	162
ErhI	CCWWGG	3 cut(s)	10, 1538, 1917
Esp3I	CGTCTC	1 cut(s)	1554
FaeI	CATG	7 cut(s)	14, 974, 1184, 1294, 1453, 1846, 1921
FaqI	GGGAC	3 cut(s)	462, 478, 1898
FatI	CATG	7 cut(s)	10, 970, 1180, 1290, 1449, 1842, 1917
FauI	CCCGC	1 cut(s)	1388
FbaI	TGATCA	1 cut(s)	67
FblI	GTMKAC	2 cut(s)	294, 421
Fnu4HI	GCNGC	8 cut(s)	52, 141, 215, 218, 486, 1914, 1978, 1981
FokI	GGATG	3 cut(s)	563, 925, 1811
FriOI	GRGCYC	1 cut(s)	162
Fsp4HI	GCNGC	8 cut(s)	52, 141, 215, 218, 486, 1914, 1978, 1981
FspBI	CTAG	3 cut(s)	489, 1253, 2013
GlaI	GCGC	4 cut(s)	130, 261, 283, 1648
GluI	GCNGC	8 cut(s)	52, 141, 215, 218, 486, 1914, 1978, 1981
GsuI	CTGGAG	4 cut(s)	1317, 1429, 1745, 2042
HaeII	RGCGCY	3 cut(s)	132, 263, 1650
HaeIII	GGCC	5 cut(s)	155, 642, 1543, 1980, 2084
HapII	CCGG	6 cut(s)	156, 386, 673, 1264, 1650, 1861
HgaI	GACGC	3 cut(s)	280, 318, 849
HhaI	GCGC	4 cut(s)	131, 262, 284, 1649
Hin1II	CATG	7 cut(s)	14, 974, 1184, 1294, 1453, 1846, 1921
Hin6I	GCGC	4 cut(s)	129, 260, 282, 1647
HinP1I	GCGC	4 cut(s)	129, 260, 282, 1647
HincII	GTYRAC	5 cut(s)	174, 190, 295, 777, 1455
HindII	GTYRAC	5 cut(s)	174, 190, 295, 777, 1455
HindIII	AAGCTT	1 cut(s)	1691
HpaI	GTTAAC	1 cut(s)	777
HpaII	CCGG	6 cut(s)	156, 386, 673, 1264, 1650, 1861
HphI	GGTGA	5 cut(s)	809, 870, 1140, 1269, 1350
Hpy188I	TCNGA	8 cut(s)	67, 595, 697, 886, 913, 1345, 2038, 2065
Hpy188III	TCNNGA	8 cut(s)	230, 665, 705, 751, 966, 1202, 1370, 1706
Hpy99I	CGWCG	5 cut(s)	296, 299, 334, 1627, 1755
HpyAV	CCTTC	6 cut(s)	188, 733, 891, 985, 1048, 1723
HpyCH4III	ACNGT	6 cut(s)	80, 113, 511, 573, 1029, 1141
HpyCH4IV	ACGT	3 cut(s)	823, 890, 1887
HpyF3I	CTNAG	5 cut(s)	696, 771, 1019, 1070, 1551
HpySE526I	ACGT	3 cut(s)	823, 890, 1887
Hsp92II	CATG	7 cut(s)	14, 974, 1184, 1294, 1453, 1846, 1921
HspAI	GCGC	4 cut(s)	129, 260, 282, 1647
KpnI	GGTACC	1 cut(s)	2052
KroI	GCCGGC	1 cut(s)	385
KroNI	GCCGGC	1 cut(s)	387
Ksp22I	TGATCA	1 cut(s)	67
KspAI	GTTAAC	1 cut(s)	777
LmnI	GCTCC	2 cut(s)	166, 1857
Lsp1109I	GCAGC	4 cut(s)	201, 229, 472, 1925
LweI	GCATC	1 cut(s)	1283
MaeI	CTAG	3 cut(s)	489, 1253, 2013
MaeII	ACGT	3 cut(s)	823, 890, 1887
MaeIII	GTNAC	4 cut(s)	1190, 1248, 1294, 1849
MbiI	CCGCTC	2 cut(s)	169, 1383
MboII	GAAGA	9 cut(s)	96, 331, 745, 1056, 1224, 1463, 2015, 2051, 2089
MfeI	CAATTG	2 cut(s)	365, 1590
MflI	RGATCY	5 cut(s)	205, 742, 1045, 1557, 2027
MhlI	GDGCHC	6 cut(s)	162, 578, 695, 1331, 1738, 1828
MlyI	GAGTC	4 cut(s)	460, 1030, 1256, 1403
MmeI	TCCRAC	1 cut(s)	376
MroNI	GCCGGC	1 cut(s)	385
MseI	TTAA	5 cut(s)	500, 657, 776, 1094, 1992
MslI	CAYNNNNRTG	1 cut(s)	822
MspA1I	CMGCKG	1 cut(s)	1792
MspI	CCGG	6 cut(s)	156, 386, 673, 1264, 1650, 1861
MspR9I	CCNGG	8 cut(s)	157, 1084, 1264, 1335, 1362, 1862, 1882, 1938
MunI	CAATTG	2 cut(s)	365, 1590
Mva1269I	GAATGC	3 cut(s)	331, 405, 602
MvaI	CCWGG	5 cut(s)	1084, 1335, 1362, 1882, 1938
MvnI	CGCG	4 cut(s)	240, 284, 291, 1983
NaeI	GCCGGC	1 cut(s)	387
NciI	CCSGG	3 cut(s)	157, 1264, 1862
NcoI	CCATGG	2 cut(s)	10, 1917
NgoMIV	GCCGGC	1 cut(s)	385
NlaIII	CATG	7 cut(s)	14, 974, 1184, 1294, 1453, 1846, 1921
NlaIV	GGNNCC	7 cut(s)	853, 1268, 1328, 1735, 1859, 1879, 2050
NmuCI	GTSAC	2 cut(s)	1190, 1248
NotI	GCGGCCGC	1 cut(s)	1978
NspI	RCATGY	2 cut(s)	1453, 1846
NspV	TTCGAA	1 cut(s)	107
OliI	CACNNNNGTG	1 cut(s)	822
PaeR7I	CTCGAG	1 cut(s)	161
PaqCI	CACCTGC	1 cut(s)	839
PctI	GAATGC	3 cut(s)	331, 405, 602
PdiI	GCCGGC	1 cut(s)	387
PfeI	GAWTC	6 cut(s)	622, 791, 1163, 1484, 1715, 1834
PflFI	GACNNNGTC	1 cut(s)	1393
PkrI	GCNGC	8 cut(s)	53, 142, 216, 219, 487, 1915, 1979, 1982
Ple19I	CGATCG	1 cut(s)	58
PleI	GAGTC	4 cut(s)	460, 1029, 1255, 1402
PpsI	GAGTC	4 cut(s)	460, 1029, 1255, 1402
Ppu21I	YACGTR	2 cut(s)	824, 891
PshAI	GACNNNNGTC	1 cut(s)	1197
Psp6I	CCWGG	5 cut(s)	1082, 1333, 1360, 1880, 1936
PspEI	GGTNACC	1 cut(s)	1294
PspGI	CCWGG	5 cut(s)	1082, 1333, 1360, 1880, 1936
PspN4I	GGNNCC	7 cut(s)	853, 1268, 1328, 1735, 1859, 1879, 2050
PspPI	GGNCC	3 cut(s)	235, 1652, 2082
PspXI	VCTCGAGB	1 cut(s)	161
PstI	CTGCAG	2 cut(s)	219, 874
PsuI	RGATCY	5 cut(s)	205, 742, 1045, 1557, 2027
PsyI	GACNNNGTC	1 cut(s)	1393
PvuI	CGATCG	1 cut(s)	58
PvuII	CAGCTG	1 cut(s)	1792
RgaI	GCGATCGC	1 cut(s)	58
RsaI	GTAC	1 cut(s)	2050
RsaNI	GTAC	1 cut(s)	2049
RseI	CAYNNNNRTG	1 cut(s)	822
SalI	GTCGAC	1 cut(s)	293
SaqAI	TTAA	5 cut(s)	500, 657, 776, 1094, 1992
SatI	GCNGC	8 cut(s)	52, 141, 215, 218, 486, 1914, 1978, 1981
Sau96I	GGNCC	3 cut(s)	235, 1652, 2082
SchI	GAGTC	4 cut(s)	460, 1030, 1256, 1403
ScrFI	CCNGG	8 cut(s)	157, 1084, 1264, 1335, 1362, 1862, 1882, 1938
SduI	GDGCHC	6 cut(s)	162, 578, 695, 1331, 1738, 1828
SfaAI	GCGATCGC	1 cut(s)	58
SfaNI	GCATC	1 cut(s)	1283
SfcI	CTRYAG	4 cut(s)	215, 606, 870, 1870
Sfr274I	CTCGAG	1 cut(s)	161
SfuI	TTCGAA	1 cut(s)	107
SgfI	GCGATCGC	1 cut(s)	58
SgrDI	CGTCGACG	1 cut(s)	293
SinI	GGWCC	2 cut(s)	235, 1652
SlaI	CTCGAG	1 cut(s)	161
SmiI	ATTTAAAT	1 cut(s)	501
SmiMI	CAYNNNNRTG	1 cut(s)	822
SmlI	CTYRAG	2 cut(s)	161, 749
SmoI	CTYRAG	2 cut(s)	161, 749
SnaBI	TACGTA	1 cut(s)	891
SpeI	ACTAGT	1 cut(s)	2012
SspI	AATATT	1 cut(s)	1078
SspMI	CTAG	3 cut(s)	489, 1253, 2013
StyD4I	CCNGG	8 cut(s)	155, 1082, 1262, 1333, 1360, 1860, 1880, 1936
StyI	CCWWGG	3 cut(s)	10, 1538, 1917
SwaI	ATTTAAAT	1 cut(s)	501
TaaI	ACNGT	6 cut(s)	80, 113, 511, 573, 1029, 1141
TaiI	ACGT	3 cut(s)	826, 893, 1890
TaqII	GACCGA	1 cut(s)	33
TauI	GCSGC	4 cut(s)	54, 143, 1980, 1983
TfiI	GAWTC	6 cut(s)	622, 791, 1163, 1484, 1715, 1834
Tru1I	TTAA	5 cut(s)	500, 657, 776, 1094, 1992
Tru9I	TTAA	5 cut(s)	500, 657, 776, 1094, 1992
TscAI	CASTG	6 cut(s)	254, 487, 793, 862, 1530, 1771
TseFI	GTSAC	2 cut(s)	1190, 1248
TseI	GCWGC	4 cut(s)	214, 217, 485, 1913
Tsp45I	GTSAC	2 cut(s)	1190, 1248
TspDTI	ATGAA	9 cut(s)	338, 528, 752, 990, 1004, 1155, 1231, 1463, 1558
TspGWI	ACGGA	1 cut(s)	942
TspRI	CASTG	6 cut(s)	254, 487, 793, 862, 1530, 1771
Tth111I	GACNNNGTC	1 cut(s)	1393
VneI	GTGCAC	2 cut(s)	574, 1824
VpaK11BI	GGWCC	2 cut(s)	235, 1652
XapI	RAATTY	3 cut(s)	526, 660, 997
XceI	RCATGY	2 cut(s)	1453, 1846
XhoI	CTCGAG	1 cut(s)	161
XmiI	GTMKAC	2 cut(s)	294, 421
XspI	CTAG	3 cut(s)	489, 1253, 2013

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.