Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr7

Orthogroup ID

OG0004441

Physical Location & Seq

Genomic Coordinates Reverse (-)

21968454 .. 21973804

Gene Structure 5351 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom07g19670.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2100 bp

ATGACTAACCGTGGAGACCGAGATTTACACACGAACGAAGAGATCGATTGCGTTGGGATCGATCAATCGAACGGTGGGGAATTGGAGAACTCGTCCCCCACGAACGGTGTGGGGAGCTCCGCCGCTGGACCGGCGTCGAGGAGTGAGACTGGGCTCGAGGAGCGGTTGACGGGGATACTTGTTGACGAAGGAGATGGAGATCTGTTGCTCCAGCAGAGCAATCGGGAGGACCGCGTTTTGCAGTGGCTAGAAGCGCTTGATATGCAGGTTATGGGCGCGTGTCGCGCCGACGAGAGGTTGAAGCCGCTGTTGAAGATGAATGCCTCGAATGACGTCGCAGAGGATCGATTGTTAGCTCAATTGAGCCAGCATTTCGGGCCAGCGGAAGTTGGAATGCTAGCGAGGTGCTTCTGTATACCTCTCGTTTCTATTCGTGTGGGGAAGATCAACAAGCAAGGGACTCTCTTGTGCCCCACTGCTGCAAGGGGCAATTTAAATCTTACTGTTTTGCCAACTTCAAATTTACGCCTTTCATTCGTTGGGGATGATGGTCGTATAGATAGACTGTGCACCTTACATAACAAATCCCAGTGCTTTGCTGTAGAAATCAATGAAATTCCAGCAGACAATTCTGGCCGGTCTTTCCTTATTAAAATCCCAGATGGCCAGAGTTTATACTTTTGGTGCTCTGAGACATCAAGACTTTTGGGGATTGAATTGCTTTCAAAGATGAAGGATCTGCTCAAGAGGAAGCCCTCCATAGCCGAGTTAACTGGAATCAGTGAACCTCGCCTTGGTTGCTTTGCAACTCACCTACGTTCCTATCTGGTGGGCTCAACAGTAGGTGGCAGTGTGTCAAGTTCTGCAGGCTCACCTTCTGATTTGCATACCACCACAGAACCGTCTGATACAGCTCAAGATGGACAATTCTCATCCACATCATCAAAATCCCTGCGTTCCCGACATGGTGTCAATCAGTCCATGAAGGCAAATTCATCATTTCAGGGTCGCCTGAGCCCAAGGTCAAGTTCCTTCAAAGATCTGCCCAGAACCTTGTCTTCTCTGAGGAATATTACCAGGGAGAAGCTAAGGAGGCGAGGCGACATCTTAGTTTCAGCCATTGATAACCCAACAACTGCTTCACCAATCACAATCGATTCATCTTGTTCAAATCATGCTGAAACTGACAGTTGTCCAGAAACTATTAGAAGTTGCTCGTTGTCATCTTCAAGTTTCCTAGAGTCGCTAGGGAAATTGGCTCGTCCACCGACCCTGAAACCTGCATCACATGTTCCTTACATGGTTACCCCTCTGTTATCTCCTTACTATTGTTGGTGCCCTCCAGGTTCATCGGATTTGCAGTACTCACCAGAACATCCTGAACTCCCCCGCTCATTGACGGAATCAGCTTTGCTTCCACCACTTTCATCTTTATTGCCGCCCAATATGCCCTCGAGCATGTTGTCAACAAAACCACATCTTAATTTGGCCGATTCCCCCTTGCTTGATTTCCCTGCATTTTTCCCAGACCCACTGGTTAGGCTAGCAAGGCCAACTTCTCAGCAGATCCCAACTTTCACACCCTTGATGTGCGACCCAATTGTTCACATTCCAGTCATCGATATTTGCTCGTCGGGTCAAGGATACTTGGTCAGCGCTGGTCCCACTATTTCAACAGCAATATCTCCCCTGCACTCAAAGCTTGCGAACATTCCCGAAACTGATTCTATACTGGAGAAAGGTGCCAGAGAGACACTGCGACTTCTAATCAGTGGTTCGACCCAGAATAGCTCACAGCTGATAGATGTATTGCCTGCTATGCTATCAAATGCGCATGAGAATCGAAACATGCTTGTTGCTGGGAGCCGGGGTCTCTACAGTGGAACCAGGGACGTTGACGTGATTGCAAACAGCATTGCAGCCATGGGTCTGGTTTCACTGCCTGGGATATCGAATATGGCAAGTGTTTTAGATAATTCTAGCAGTCGCGACAGTTTTAATATGCAGGAAGAGGGATCAAGTGGGCTGGATGGACCTTGTTCGGAAGATAAAGGTGCCGCCTTTTGTTCGGATTATAGGGTAAAGAGGGGTGATGAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

700

Amino Acids

75.14

Weight (kDa)

5.58

Isoelectric Point (pI)

53.48

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004441)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G39950 AT2G39950 AT2G39950 AT2G39950 AT2G39950 AT2G39950 AT2G39950 AT2G39950 AT2G39950
fragaria_vesca	FvH4_7g24020 FvH4_7g24020 FvH4_7g24020
malus_domestica	MD01G1147200.v1.1
prunus_persica	Prupe.2G246100_v2.0.a1
pyrus_communis	pycom01g16620 pycom07g19650 pycom07g19670
rosa_chinensis	RchiOBHm_Chr1g0369361 RchiOBHm_Chr1g0369401
rosa_laevigata	RLG00000027133
rosa_multiflora	Rmu_co8268097.1_g000001 Rmu_sc0003612.1_g000020 Rmu_sc0006332.1_g000003
rosa_roxburghii	Rroxscaffold_4G00287680
rosa_rugosa	Rorug01G0349700 Rorug01G0349800
rosa_samantha	Rh1AG357200 Rh1AG357400 Rh1BG321400 Rh1CG335300 Rh1DG352100
rosa_wichuraiana	Rw1G031540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	336
Acc16I	TGCGCA	1 cut(s)	1833
Acc36I	ACCTGC	2 cut(s)	256, 1288
AccB1I	GGYRCC	3 cut(s)	1335, 1742, 2054
AccBSI	CCGCTC	2 cut(s)	163, 1392
AccI	GTMKAC	1 cut(s)	415
AccII	CGCG	4 cut(s)	234, 278, 285, 1989
AciI	CCGC	9 cut(s)	120, 123, 163, 232, 305, 383, 1390, 1439, 2058
AclWI	GGATC	5 cut(s)	65, 351, 744, 1561, 2023
AcoI	YGGCCR	3 cut(s)	634, 664, 1488
AcsI	RAATTY	3 cut(s)	520, 615, 991
AcyI	GRCGYC	2 cut(s)	134, 333
AfaI	GTAC	1 cut(s)	1364
AfeI	AGCGCT	2 cut(s)	255, 1657
AfiI	CCNNNNNNNGG	3 cut(s)	104, 294, 794
AflIII	ACRYGT	1 cut(s)	1288
AgsI	TTSAA	9 cut(s)	301, 313, 519, 716, 726, 1036, 1170, 1230, 1674
AhdI	GACNNNNNGTC	1 cut(s)	968
AjiI	CACGTC	1 cut(s)	1900
AjnI	CCWGG	4 cut(s)	1076, 1342, 1886, 1942
AjuI	GAANNNNNNNTTGG	6 cut(s)	777, 809, 1012, 1044, 1123, 1155
AluBI	AGCT	8 cut(s)	117, 356, 914, 1087, 1409, 1702, 1791, 1798
AluI	AGCT	8 cut(s)	117, 356, 914, 1087, 1409, 1702, 1791, 1798
Alw21I	GWGCWC	3 cut(s)	119, 572, 689
Alw26I	GTCTC	5 cut(s)	9, 140, 686, 1745, 1877
Alw44I	GTGCAC	1 cut(s)	568
AlwI	GGATC	5 cut(s)	65, 351, 744, 1561, 2023
Ama87I	CYCGRG	2 cut(s)	155, 1453
Aor51HI	AGCGCT	2 cut(s)	255, 1657
AoxI	GGCC	5 cut(s)	377, 634, 664, 1488, 1550
ApaLI	GTGCAC	1 cut(s)	568
ApeKI	GCWGC	2 cut(s)	479, 1919
ApoI	RAATTY	3 cut(s)	520, 615, 991
AspLEI	GCGC	5 cut(s)	256, 278, 287, 1658, 1834
AspS9I	GGNCC	5 cut(s)	128, 229, 377, 1661, 2033
AsuC2I	CCSGG	1 cut(s)	1868
AsuHPI	GGTGA	4 cut(s)	803, 864, 1134, 1359
AsuNHI	GCTAGC	2 cut(s)	397, 1543
AvaI	CYCGRG	2 cut(s)	155, 1453
AvaII	GGWCC	4 cut(s)	128, 229, 1661, 2033
BaeGI	GKGCMC	3 cut(s)	473, 572, 1340
BalI	TGGCCA	1 cut(s)	666
BanI	GGYRCC	3 cut(s)	1335, 1742, 2054
BanII	GRGCYC	4 cut(s)	119, 156, 836, 1019
BbsI	GAAGAC	1 cut(s)	1050
Bbv12I	GWGCWC	3 cut(s)	119, 572, 689
BbvI	GCAGC	2 cut(s)	466, 1931
BccI	CCATC	5 cut(s)	188, 542, 656, 914, 2024
BcgI	CGANNNNNNTGC	4 cut(s)	203, 237, 1823, 1857
BciT130I	CCWGG	4 cut(s)	1078, 1344, 1888, 1944
BciVI	GTATCC	2 cut(s)	168, 1637
BcnI	CCSGG	1 cut(s)	1868
BcoDI	GTCTC	5 cut(s)	9, 140, 686, 1745, 1877
BfaI	CTAG	6 cut(s)	248, 398, 1238, 1247, 1544, 1980
BfmI	CTRYAG	3 cut(s)	600, 864, 1876
BfoI	RGCGCY	2 cut(s)	257, 1659
BfuAI	ACCTGC	2 cut(s)	256, 1288
BfuI	GTATCC	2 cut(s)	168, 1637
BglII	AGATCT	2 cut(s)	199, 1039
BisI	GCNGC	6 cut(s)	123, 305, 480, 1439, 1920, 2058
BlsI	GCNGC	6 cut(s)	124, 306, 481, 1440, 1921, 2059
BmcAI	AGTACT	1 cut(s)	1364
Bme1390I	CCNGG	5 cut(s)	1078, 1344, 1868, 1888, 1944
Bme18I	GGWCC	4 cut(s)	128, 229, 1661, 2033
BmeRI	GACNNNNNGTC	1 cut(s)	968
BmeT110I	CYCGRG	2 cut(s)	155, 1453
BmgBI	CACGTC	1 cut(s)	1900
BmgT120I	GGNCC	5 cut(s)	128, 229, 377, 1661, 2033
BmiI	GGNNCC	6 cut(s)	1337, 1663, 1744, 1865, 1885, 2056
BmrFI	CCNGG	5 cut(s)	1078, 1344, 1868, 1888, 1944
BmrI	ACTGGG	2 cut(s)	159, 583
BmsI	GCATC	1 cut(s)	1292
BmtI	GCTAGC	2 cut(s)	401, 1547
BmuI	ACTGGG	2 cut(s)	159, 583
BoxI	GACNNNNGTC	2 cut(s)	133, 1191
BpiI	GAAGAC	1 cut(s)	1050
BpmI	CTGGAG	3 cut(s)	194, 1326, 1754
Bpu10I	CCTNAGC	2 cut(s)	1013, 1088
BpuEI	CTTGAG	2 cut(s)	728, 900
BpuMI	CCSGG	1 cut(s)	1868
Bsa29I	ATCGAT	5 cut(s)	45, 60, 346, 1155, 1620
BsaBI	GATNNNNATC	1 cut(s)	198
BsaHI	GRCGYC	2 cut(s)	134, 333
BsaI	GGTCTC	2 cut(s)	9, 1877
BsaJI	CCNNGG	8 cut(s)	10, 793, 1019, 1077, 1867, 1887, 1923, 1943
BsaXI	ACNNNNNCTCC	4 cut(s)	77, 107, 1855, 1885
Bsc4I	CCNNNNNNNGG	3 cut(s)	104, 294, 794
Bse118I	RCCGGY	2 cut(s)	130, 636
Bse1I	ACTGG	6 cut(s)	154, 589, 778, 1539, 1613, 1737
Bse3DI	GCAATG	1 cut(s)	1914
Bse8I	GATNNNNATC	1 cut(s)	198
BseBI	CCWGG	4 cut(s)	1078, 1344, 1888, 1944
BseCI	ATCGAT	5 cut(s)	45, 60, 346, 1155, 1620
BseDI	CCNNGG	8 cut(s)	10, 793, 1019, 1077, 1867, 1887, 1923, 1943
BseGI	GGATG	4 cut(s)	550, 932, 1375, 2035
BseJI	GATNNNNATC	1 cut(s)	198
BseLI	CCNNNNNNNGG	3 cut(s)	104, 294, 794
BseMI	GCAATG	1 cut(s)	1914
BseMII	CTCAG	4 cut(s)	681, 1004, 1055, 1574
BseNI	ACTGG	6 cut(s)	154, 589, 778, 1539, 1613, 1737
BseRI	GAGGAG	2 cut(s)	154, 173
BseSI	GKGCMC	3 cut(s)	473, 572, 1340
BseXI	GCAGC	2 cut(s)	466, 1931
BseYI	CCCAGC	1 cut(s)	1859
BsgI	GTGCAG	1 cut(s)	1676
Bsh1236I	CGCG	4 cut(s)	234, 278, 285, 1989
BshFI	GGCC	5 cut(s)	379, 636, 666, 1490, 1552
BshNI	GGYRCC	3 cut(s)	1335, 1742, 2054
BshVI	ATCGAT	5 cut(s)	45, 60, 346, 1155, 1620
BsiHKAI	GWGCWC	3 cut(s)	119, 572, 689
BsiHKCI	CYCGRG	2 cut(s)	155, 1453
BsiSI	CCGG	3 cut(s)	131, 637, 1867
BslFI	GGGAC	4 cut(s)	79, 472, 1647, 1904
BslI	CCNNNNNNNGG	3 cut(s)	104, 294, 794
BsmAI	GTCTC	5 cut(s)	9, 140, 686, 1745, 1877
BsmFI	GGGAC	4 cut(s)	79, 472, 1647, 1904
BsmI	GAATGC	2 cut(s)	325, 399
BsnI	GGCC	5 cut(s)	379, 636, 666, 1490, 1552
Bso31I	GGTCTC	2 cut(s)	9, 1877
BsoBI	CYCGRG	2 cut(s)	155, 1453
Bsp1286I	GDGCHC	8 cut(s)	119, 156, 473, 572, 689, 836, 1019, 1340
Bsp19I	CCATGG	1 cut(s)	1923
Bsp68I	TCGCGA	1 cut(s)	1989
BspACI	CCGC	9 cut(s)	120, 123, 163, 232, 305, 383, 1390, 1439, 2058
BspANI	GGCC	5 cut(s)	379, 636, 666, 1490, 1552
BspCNI	CTCAG	4 cut(s)	682, 1005, 1056, 1573
BspDI	ATCGAT	5 cut(s)	45, 60, 346, 1155, 1620
BspFNI	CGCG	4 cut(s)	234, 278, 285, 1989
BspLI	GGNNCC	6 cut(s)	1337, 1663, 1744, 1865, 1885, 2056
BspMAI	CTGCAG	1 cut(s)	868
BspMI	ACCTGC	2 cut(s)	256, 1288
BspOI	GCTAGC	2 cut(s)	401, 1547
BspPI	GGATC	5 cut(s)	65, 351, 744, 1561, 2023
BspT107I	GGYRCC	3 cut(s)	1335, 1742, 2054
BspTNI	GGTCTC	2 cut(s)	9, 1877
BsrBI	CCGCTC	2 cut(s)	163, 1392
BsrDI	GCAATG	1 cut(s)	1914
BsrFI	RCCGGY	2 cut(s)	130, 636
BsrI	ACTGG	6 cut(s)	154, 589, 778, 1539, 1613, 1737
BssAI	RCCGGY	2 cut(s)	130, 636
BssECI	CCNNGG	8 cut(s)	10, 793, 1019, 1077, 1867, 1887, 1923, 1943
BssNAI	GTATAC	1 cut(s)	416
BssNI	GRCGYC	2 cut(s)	134, 333
BssT1I	CCWWGG	3 cut(s)	793, 1019, 1923
Bst1107I	GTATAC	1 cut(s)	416
Bst2UI	CCWGG	4 cut(s)	1078, 1344, 1888, 1944
Bst6I	CTCTTC	2 cut(s)	33, 2004
BstACI	GRCGYC	2 cut(s)	134, 333
BstC8I	GCNNGC	7 cut(s)	368, 381, 399, 868, 1545, 1704, 1815
BstDEI	CTNAG	6 cut(s)	690, 1013, 1064, 1088, 1108, 1560
BstDSI	CCRYGG	2 cut(s)	10, 1923
BstEII	GGTNACC	1 cut(s)	1303
BstF5I	GGATG	4 cut(s)	550, 932, 1375, 2035
BstFNI	CGCG	4 cut(s)	234, 278, 285, 1989
BstH2I	RGCGCY	2 cut(s)	257, 1659
BstHHI	GCGC	5 cut(s)	256, 278, 287, 1658, 1834
BstMAI	GTCTC	5 cut(s)	9, 140, 686, 1745, 1877
BstNI	CCWGG	4 cut(s)	1078, 1344, 1888, 1944
BstNSI	RCATGY	3 cut(s)	1292, 1462, 1852
BstPAI	GACNNNNGTC	2 cut(s)	133, 1191
BstPI	GGTNACC	1 cut(s)	1303
BstSCI	CCNGG	5 cut(s)	1076, 1342, 1866, 1886, 1942
BstSFI	CTRYAG	3 cut(s)	600, 864, 1876
BstSLI	GKGCMC	3 cut(s)	473, 572, 1340
BstUI	CGCG	4 cut(s)	234, 278, 285, 1989
BstV1I	GCAGC	2 cut(s)	466, 1931
BstV2I	GAAGAC	1 cut(s)	1050
BstX2I	RGATCY	4 cut(s)	199, 736, 1039, 1566
BstXI	CCANNNNNNTGG	1 cut(s)	1930
BstYI	RGATCY	4 cut(s)	199, 736, 1039, 1566
BstZ17I	GTATAC	1 cut(s)	416
Bsu15I	ATCGAT	5 cut(s)	45, 60, 346, 1155, 1620
BsuI	GTATCC	2 cut(s)	168, 1637
BsuRI	GGCC	5 cut(s)	379, 636, 666, 1490, 1552
BsuTUI	ATCGAT	5 cut(s)	45, 60, 346, 1155, 1620
BtgI	CCRYGG	2 cut(s)	10, 1923
BtrI	CACGTC	1 cut(s)	1900
BtsCI	GGATG	4 cut(s)	550, 932, 1375, 2035
BtsI	GCAGTG	5 cut(s)	248, 474, 856, 1754, 1937
BtuMI	TCGCGA	1 cut(s)	1989
BveI	ACCTGC	2 cut(s)	256, 1288
Cac8I	GCNNGC	7 cut(s)	368, 381, 399, 868, 1545, 1704, 1815
CfoI	GCGC	5 cut(s)	256, 278, 287, 1658, 1834
Cfr10I	RCCGGY	2 cut(s)	130, 636
Cfr13I	GGNCC	5 cut(s)	128, 229, 377, 1661, 2033
ClaI	ATCGAT	5 cut(s)	45, 60, 346, 1155, 1620
CseI	GACGC	1 cut(s)	123
Csp6I	GTAC	1 cut(s)	1363
CviAII	CATG	9 cut(s)	965, 982, 1175, 1289, 1300, 1459, 1835, 1849, 1924
CviQI	GTAC	1 cut(s)	1363
DdeI	CTNAG	6 cut(s)	690, 1013, 1064, 1088, 1108, 1560
DraI	TTTAAA	1 cut(s)	495
DriI	GACNNNNNGTC	1 cut(s)	968
EaeI	YGGCCR	3 cut(s)	634, 664, 1488
Eam1104I	CTCTTC	2 cut(s)	33, 2004
Eam1105I	GACNNNNNGTC	1 cut(s)	968
EarI	CTCTTC	2 cut(s)	33, 2004
EciI	GGCGGA	1 cut(s)	109
Ecl136II	GAGCTC	1 cut(s)	117
Eco130I	CCWWGG	3 cut(s)	793, 1019, 1923
Eco24I	GRGCYC	4 cut(s)	119, 156, 836, 1019
Eco31I	GGTCTC	2 cut(s)	9, 1877
Eco32I	GATATC	1 cut(s)	1950
Eco47I	GGWCC	4 cut(s)	128, 229, 1661, 2033
Eco47III	AGCGCT	2 cut(s)	255, 1657
Eco53kI	GAGCTC	1 cut(s)	117
Eco88I	CYCGRG	2 cut(s)	155, 1453
Eco91I	GGTNACC	1 cut(s)	1303
EcoICRI	GAGCTC	1 cut(s)	117
EcoO65I	GGTNACC	1 cut(s)	1303
EcoRII	CCWGG	4 cut(s)	1076, 1342, 1886, 1942
EcoRV	GATATC	1 cut(s)	1950
EcoT14I	CCWWGG	3 cut(s)	793, 1019, 1923
EcoT38I	GRGCYC	4 cut(s)	119, 156, 836, 1019
ErhI	CCWWGG	3 cut(s)	793, 1019, 1923
FaeI	CATG	9 cut(s)	968, 985, 1178, 1292, 1303, 1462, 1838, 1852, 1927
FalI	AAGNNNNNCTT	2 cut(s)	1540, 1572
FaqI	GGGAC	4 cut(s)	79, 472, 1647, 1904
FatI	CATG	9 cut(s)	964, 981, 1174, 1288, 1299, 1458, 1834, 1848, 1923
FauI	CCCGC	1 cut(s)	1397
FblI	GTMKAC	1 cut(s)	415
Fnu4HI	GCNGC	6 cut(s)	123, 305, 480, 1439, 1920, 2058
FokI	GGATG	4 cut(s)	557, 919, 1362, 2042
FriOI	GRGCYC	4 cut(s)	119, 156, 836, 1019
Fsp4HI	GCNGC	6 cut(s)	123, 305, 480, 1439, 1920, 2058
FspAI	RTGCGCAY	1 cut(s)	1833
FspBI	CTAG	6 cut(s)	248, 398, 1238, 1247, 1544, 1980
FspI	TGCGCA	1 cut(s)	1833
GlaI	GCGC	5 cut(s)	255, 277, 286, 1657, 1833
GluI	GCNGC	6 cut(s)	123, 305, 480, 1439, 1920, 2058
GsaI	CCCAGC	1 cut(s)	1863
GsuI	CTGGAG	3 cut(s)	194, 1326, 1754
HaeII	RGCGCY	2 cut(s)	257, 1659
HaeIII	GGCC	5 cut(s)	379, 636, 666, 1490, 1552
HapII	CCGG	3 cut(s)	131, 637, 1867
HgaI	GACGC	1 cut(s)	123
HhaI	GCGC	5 cut(s)	256, 278, 287, 1658, 1834
Hin1I	GRCGYC	2 cut(s)	134, 333
Hin1II	CATG	9 cut(s)	968, 985, 1178, 1292, 1303, 1462, 1838, 1852, 1927
Hin6I	GCGC	5 cut(s)	254, 276, 285, 1656, 1832
HinP1I	GCGC	5 cut(s)	254, 276, 285, 1656, 1832
HincII	GTYRAC	5 cut(s)	168, 184, 771, 1467, 1897
HindII	GTYRAC	5 cut(s)	168, 184, 771, 1467, 1897
HindIII	AAGCTT	1 cut(s)	1700
HinfI	GANTC	8 cut(s)	460, 777, 1157, 1241, 1403, 1493, 1724, 1840
HpaI	GTTAAC	1 cut(s)	771
HpaII	CCGG	3 cut(s)	131, 637, 1867
HphI	GGTGA	4 cut(s)	803, 864, 1134, 1359
Hpy188I	TCNGA	7 cut(s)	691, 880, 907, 1065, 1354, 2044, 2071
Hpy188III	TCNNGA	9 cut(s)	224, 699, 745, 917, 960, 1196, 1379, 1715, 1988
Hpy99I	CGWCG	4 cut(s)	139, 293, 338, 1636
HpyAV	CCTTC	5 cut(s)	182, 727, 885, 979, 1042
HpyCH4IV	ACGT	4 cut(s)	333, 817, 1893, 1899
HpyF3I	CTNAG	6 cut(s)	690, 1013, 1064, 1088, 1108, 1560
HpySE526I	ACGT	4 cut(s)	333, 817, 1893, 1899
Hsp92I	GRCGYC	2 cut(s)	134, 333
Hsp92II	CATG	9 cut(s)	968, 985, 1178, 1292, 1303, 1462, 1838, 1852, 1927
HspAI	GCGC	5 cut(s)	254, 276, 285, 1656, 1832
KspAI	GTTAAC	1 cut(s)	771
LmnI	GCTCC	5 cut(s)	114, 122, 160, 213, 1863
Lsp1109I	GCAGC	2 cut(s)	466, 1931
LweI	GCATC	1 cut(s)	1292
MaeI	CTAG	6 cut(s)	248, 398, 1238, 1247, 1544, 1980
MaeII	ACGT	4 cut(s)	333, 817, 1893, 1899
MaeIII	GTNAC	1 cut(s)	1303
MbiI	CCGCTC	2 cut(s)	163, 1392
MboII	GAAGA	7 cut(s)	50, 325, 454, 1050, 1218, 2021, 2057
MfeI	CAATTG	2 cut(s)	359, 1599
MflI	RGATCY	4 cut(s)	199, 736, 1039, 1566
MhlI	GDGCHC	8 cut(s)	119, 156, 473, 572, 689, 836, 1019, 1340
MlsI	TGGCCA	1 cut(s)	666
MluNI	TGGCCA	1 cut(s)	666
MlyI	GAGTC	2 cut(s)	454, 1250
MmeI	TCCRAC	1 cut(s)	370
Mox20I	TGGCCA	1 cut(s)	666
MscI	TGGCCA	1 cut(s)	666
MseI	TTAA	5 cut(s)	494, 651, 770, 1482, 1998
Msp20I	TGGCCA	1 cut(s)	666
MspA1I	CMGCKG	4 cut(s)	125, 307, 383, 1798
MspI	CCGG	3 cut(s)	131, 637, 1867
MspR9I	CCNGG	5 cut(s)	1078, 1344, 1868, 1888, 1944
MunI	CAATTG	2 cut(s)	359, 1599
Mva1269I	GAATGC	2 cut(s)	325, 399
MvaI	CCWGG	4 cut(s)	1078, 1344, 1888, 1944
MvnI	CGCG	4 cut(s)	234, 278, 285, 1989
NciI	CCSGG	1 cut(s)	1868
NcoI	CCATGG	1 cut(s)	1923
NheI	GCTAGC	2 cut(s)	397, 1543
NlaIII	CATG	9 cut(s)	968, 985, 1178, 1292, 1303, 1462, 1838, 1852, 1927
NlaIV	GGNNCC	6 cut(s)	1337, 1663, 1744, 1865, 1885, 2056
NmeAIII	GCCGAG	1 cut(s)	790
NruI	TCGCGA	1 cut(s)	1989
NsbI	TGCGCA	1 cut(s)	1833
NspI	RCATGY	3 cut(s)	1292, 1462, 1852
PaeR7I	CTCGAG	2 cut(s)	155, 1453
PciI	ACATGT	1 cut(s)	1288
PcsI	WCGNNNNNNNCGW	2 cut(s)	42, 98
PctI	GAATGC	2 cut(s)	325, 399
PfeI	GAWTC	6 cut(s)	777, 1157, 1403, 1493, 1724, 1840
PkrI	GCNGC	6 cut(s)	124, 306, 481, 1440, 1921, 2059
PleI	GAGTC	2 cut(s)	454, 1249
PpsI	GAGTC	2 cut(s)	454, 1249
PscI	ACATGT	1 cut(s)	1288
PshAI	GACNNNNGTC	2 cut(s)	133, 1191
Psp124BI	GAGCTC	1 cut(s)	119
Psp6I	CCWGG	4 cut(s)	1076, 1342, 1886, 1942
PspEI	GGTNACC	1 cut(s)	1303
PspFI	CCCAGC	1 cut(s)	1859
PspGI	CCWGG	4 cut(s)	1076, 1342, 1886, 1942
PspN4I	GGNNCC	6 cut(s)	1337, 1663, 1744, 1865, 1885, 2056
PspPI	GGNCC	5 cut(s)	128, 229, 377, 1661, 2033
PspXI	VCTCGAGB	2 cut(s)	155, 1453
PstI	CTGCAG	1 cut(s)	868
PsuI	RGATCY	4 cut(s)	199, 736, 1039, 1566
PvuII	CAGCTG	1 cut(s)	1798
RruI	TCGCGA	1 cut(s)	1989
RsaI	GTAC	1 cut(s)	1364
RsaNI	GTAC	1 cut(s)	1363
SacI	GAGCTC	1 cut(s)	119
SaqAI	TTAA	5 cut(s)	494, 651, 770, 1482, 1998
SatI	GCNGC	6 cut(s)	123, 305, 480, 1439, 1920, 2058
Sau96I	GGNCC	5 cut(s)	128, 229, 377, 1661, 2033
ScaI	AGTACT	1 cut(s)	1364
SchI	GAGTC	2 cut(s)	454, 1250
ScrFI	CCNGG	5 cut(s)	1078, 1344, 1868, 1888, 1944
SduI	GDGCHC	8 cut(s)	119, 156, 473, 572, 689, 836, 1019, 1340
SfaNI	GCATC	1 cut(s)	1292
SfcI	CTRYAG	3 cut(s)	600, 864, 1876
Sfr274I	CTCGAG	2 cut(s)	155, 1453
SinI	GGWCC	4 cut(s)	128, 229, 1661, 2033
SlaI	CTCGAG	2 cut(s)	155, 1453
SmiI	ATTTAAAT	1 cut(s)	495
SmlI	CTYRAG	4 cut(s)	155, 743, 915, 1453
SmoI	CTYRAG	4 cut(s)	155, 743, 915, 1453
SsiI	CCGC	9 cut(s)	120, 123, 163, 232, 305, 383, 1390, 1439, 2058
SspI	AATATT	1 cut(s)	1072
SspMI	CTAG	6 cut(s)	248, 398, 1238, 1247, 1544, 1980
SstI	GAGCTC	1 cut(s)	119
StyD4I	CCNGG	5 cut(s)	1076, 1342, 1866, 1886, 1942
StyI	CCWWGG	3 cut(s)	793, 1019, 1923
SwaI	ATTTAAAT	1 cut(s)	495
TaiI	ACGT	4 cut(s)	336, 820, 1896, 1902
TaqII	GACCGA	1 cut(s)	33
TatI	WGTACW	1 cut(s)	1362
TauI	GCSGC	4 cut(s)	125, 307, 1441, 2060
TfiI	GAWTC	6 cut(s)	777, 1157, 1403, 1493, 1724, 1840
Tru1I	TTAA	5 cut(s)	494, 651, 770, 1482, 1998
Tru9I	TTAA	5 cut(s)	494, 651, 770, 1482, 1998
TseI	GCWGC	2 cut(s)	479, 1919
TspDTI	ATGAA	9 cut(s)	332, 522, 627, 746, 984, 998, 1149, 1338, 1416
TspGWI	ACGGA	1 cut(s)	1415
VneI	GTGCAC	1 cut(s)	568
VpaK11BI	GGWCC	4 cut(s)	128, 229, 1661, 2033
XapI	RAATTY	3 cut(s)	520, 615, 991
XceI	RCATGY	3 cut(s)	1292, 1462, 1852
XcmI	CCANNNNNNNNNTGG	1 cut(s)	106
XhoI	CTCGAG	2 cut(s)	155, 1453
XmiI	GTMKAC	1 cut(s)	415
XspI	CTAG	6 cut(s)	248, 398, 1238, 1247, 1544, 1980
ZraI	GACGTC	1 cut(s)	334
ZrmI	AGTACT	1 cut(s)	1364

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.