Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr1

Orthogroup ID

OG0004441

Physical Location & Seq

Genomic Coordinates Reverse (-)

59656821 .. 59661704

Gene Structure 4884 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw1G031540.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2061 bp

ATGACCGGTCATAGAAACGAAGACTTTCACGCTAACGACGAGATCGACGGCGTCGATCGCATTTCCGATCGGTCAAACGCCGAGGAATTCGAGGACTCGTCGGCCGCGAACGGGGTCGGGAGCTCCGGCGAGGGAGCGACGTCGTCGGGGAGTGAGATTGGGCTGGAAGAGCGGTTGACCGGGATACTGGTTGAAGGAGGGGACGGAGATCTGTTGCTGCAGCAGAGCAACCGAGAGGACCGGGTTTTGCAGTGGCTTCAAGCGCTTGATATGCAGGTTATGGGCGCGTGTCGCGCAGACGAGAGGTTGAAGCCTTTGCTGAAGATGAATGCTTCGAACGATGCTGCAGAAGGTCGGTTGCTGGCTCAGTTGACTCAGCATTTTGAGCCAGCGGAAGTTGGAATGCTAGCGAGGTGCTTCTGCATACCACTTGTTTCTGTTCGTGTTGGAAAGATCAACAAGCAAGGGATTTTGTTGTGCCCTACCAATTCAAAGGGTAATTTGAATCTTACAGTCTTGCCAACATCCGATCTACGTCTTTCATTTGTTGGGGATGATGGCCATACAGATAGACTATTCACCTTAAATAGCAAATCCCAGTGCTCTGCTGTAGAAGTCAATGAGATTCCAGCAGACAATTCTGGCCGGTCTTTCATTATCAAAATCCCAGATGGTCGGATGAAGGATCTGATCAGGAGGAAGCCCTCTATTGCCGAGTTAACTGGAATCAGCGAGTCACGTCTTGGTTGCTTTGCAACTCACCTTCGTGCCTATCTGGTGGGATCAACAGTGGTTGGAAGCGGATCAAGTTCTGCACCCTCAAATACTGATGTTAATACCTCTAATATGGAGCTATTTGATACAGCTCAAGATGGACAACTCTCGTCAACATCATCAAAGTCGCTGCGTTCTCGACATAGTGTGAATCAGTCAATGAAGGCAAATTCATCGTTTCAGGGTAGCCTGAGTCCAAGGTCAAGCTCTTTCAAAGAGGGTCTCCCCAGAACCTTGTCGTCCCTGAGGAATATATCCAGGGAAAAGTTGAGGAGGCGAGGGGACATTTATCTTTCAGCGGTCGATGACCCAACAATCGTTTCACCAGTGGCAATCAATGCATCTTGTTCAAATCAATCTGAAAATGACAAGTGTGTAGAAGTTGTCGCAAGTTGCTCATTATCTTCATCAAGTTTTCTGGAGTCACTTGGAAAATTGACTGTCCAACCAACCCTGAACTCTGCATCTCAAATTCCATACATGGCTACTCCTCTTTTGTCCCCTTACTACTGTTGGTGCCCTCCCGGATCATCGGGTTTGCAGTACTCACAAGAACCTCCTGCAATCTCCGGCTCATCCATTGAATCAGCTTTGCTTCCACCACTTTCTTCTTTATTACCTGCCAGTATGCCCTCCTGTATGTTGACAGCAAAACCTCCACTTAATTTGGCAGATTGCCCCTTGTTGGATTTCCCTGCCTTTCTTCCAGACCCACTCATCCGGTTGCCAAGGCCAACTTCTCAGCAGATCCCAACCTTCAATCCTTTGATTTGTGATTCGATTGTTCACATTCCTGTTATGGATATTTGCTCTTCCGGTCAAGGGTACCTTGTCAGTGCTGGCCCCACTATTTCAACTGGCATTCCTCCCTTGCACTCAAACCTTATGAATCCATTGATTCCTCAAACTGATTCTATGTTGGAGAAGGGTGCTAGAGAGACTCTGCGTCGGCTGCTCATAAGTGGTTCAACCCAGAGTAGCTCACCGCTGATGGATGTATTACCTGCCATGCTAACAAATGCAGATGAGAATAGAAATATGCTTGTTGCTGGGAGCCGTGGTCTATACACTGGAACCAGCGACGTTGATGTAATTGCAAATAGCATTGCAGCCATGAGTATGGTTTCACTGCCTGGGATATCTACTGGTGGAACTGTTTTGGAGAATTGTGGCAGCAGCAATGGTTTTGACATACAGGATGAGGGATCTAGTGGATTGGGTGGATCCTGTTTGGAAGATCAGGGTACCTTCTGTTCGAATTATGGGATGAAAAGGACTGATGAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

686

Amino Acids

72.99

Weight (kDa)

4.96

Isoelectric Point (pI)

50.56

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004441)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G39950 AT2G39950 AT2G39950 AT2G39950 AT2G39950 AT2G39950 AT2G39950 AT2G39950 AT2G39950
fragaria_vesca	FvH4_7g24020 FvH4_7g24020 FvH4_7g24020
malus_domestica	MD01G1147200.v1.1
prunus_persica	Prupe.2G246100_v2.0.a1
pyrus_communis	pycom01g16620 pycom07g19650 pycom07g19670
rosa_chinensis	RchiOBHm_Chr1g0369361 RchiOBHm_Chr1g0369401
rosa_laevigata	RLG00000027133
rosa_multiflora	Rmu_co8268097.1_g000001 Rmu_sc0003612.1_g000020 Rmu_sc0006332.1_g000003
rosa_roxburghii	Rroxscaffold_4G00287680
rosa_rugosa	Rorug01G0349700 Rorug01G0349800
rosa_samantha	Rh1AG357200 Rh1AG357400 Rh1BG321400 Rh1CG335300 Rh1DG352100
rosa_wichuraiana	Rw1G031540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	143
Acc36I	ACCTGC	3 cut(s)	265, 1402, 1786
Acc65I	GGTACC	2 cut(s)	1599, 2018
AccB1I	GGYRCC	3 cut(s)	1290, 1599, 2018
AccBSI	CCGCTC	1 cut(s)	172
AccII	CGCG	3 cut(s)	107, 287, 294
AciI	CCGC	6 cut(s)	105, 172, 392, 801, 1073, 1760
AclWI	GGATC	8 cut(s)	693, 790, 811, 1309, 1516, 1987, 1992, 2005
AcoI	YGGCCR	3 cut(s)	102, 559, 643
AcsI	RAATTY	3 cut(s)	86, 943, 1245
AcuI	CTGAAG	1 cut(s)	341
AcyI	GRCGYC	2 cut(s)	51, 140
AfaI	GTAC	3 cut(s)	1319, 1601, 2020
AfeI	AGCGCT	1 cut(s)	264
AfiI	CCNNNNNNNGG	3 cut(s)	111, 1459, 1596
AgeI	ACCGGT	1 cut(s)	5
AhdI	GACNNNNNGTC	1 cut(s)	1719
AjiI	CACGTC	1 cut(s)	740
AjnI	CCWGG	2 cut(s)	1031, 1906
AjuI	GAANNNNNNNTTGG	4 cut(s)	1078, 1110, 1495, 1527
AleI	CACNNNNGTG	1 cut(s)	765
AluBI	AGCT	6 cut(s)	123, 853, 866, 981, 1364, 1755
AluI	AGCT	6 cut(s)	123, 853, 866, 981, 1364, 1755
Alw21I	GWGCWC	2 cut(s)	125, 605
Alw26I	GTCTC	2 cut(s)	1001, 1706
AlwI	GGATC	8 cut(s)	693, 790, 811, 1309, 1516, 1987, 1992, 2005
Aor51HI	AGCGCT	1 cut(s)	264
AoxI	GGCC	5 cut(s)	102, 559, 643, 1505, 1615
ApeKI	GCWGC	8 cut(s)	217, 220, 344, 904, 1726, 1883, 1947, 1950
ApoI	RAATTY	3 cut(s)	86, 943, 1245
AsiGI	ACCGGT	1 cut(s)	5
Asp700I	GAANNNNTTC	1 cut(s)	24
Asp718I	GGTACC	2 cut(s)	1599, 2018
AspLEI	GCGC	3 cut(s)	265, 287, 296
AspS9I	GGNCC	2 cut(s)	238, 1616
AsuC2I	CCSGG	3 cut(s)	181, 242, 1299
AsuHPI	GGTGA	4 cut(s)	571, 752, 1089, 1749
AsuII	TTCGAA	2 cut(s)	335, 2030
AsuNHI	GCTAGC	1 cut(s)	406
AvaII	GGWCC	1 cut(s)	238
AxyI	CCTNAGG	1 cut(s)	1019
BaeGI	GKGCMC	2 cut(s)	482, 1295
BalI	TGGCCA	1 cut(s)	561
BamHI	GGATCC	1 cut(s)	1997
BanI	GGYRCC	3 cut(s)	1290, 1599, 2018
BanII	GRGCYC	1 cut(s)	125
BbsI	GAAGAC	1 cut(s)	27
Bbv12I	GWGCWC	2 cut(s)	125, 605
BbvI	GCAGC	8 cut(s)	204, 232, 331, 891, 1713, 1895, 1959, 1962
BccI	CCATC	4 cut(s)	551, 665, 866, 1759
BceAI	ACGGC	2 cut(s)	64, 1815
BcgI	CGANNNNNNTGC	2 cut(s)	930, 964
BciT130I	CCWGG	2 cut(s)	1033, 1908
BciVI	GTATCC	1 cut(s)	177
BclI	TGATCA	1 cut(s)	690
BcnI	CCSGG	3 cut(s)	181, 242, 1299
BcoDI	GTCTC	2 cut(s)	1001, 1706
BfaI	CTAG	3 cut(s)	407, 1707, 1983
BfmI	CTRYAG	3 cut(s)	218, 345, 609
BfoI	RGCGCY	1 cut(s)	266
BfuAI	ACCTGC	3 cut(s)	265, 1402, 1786
BfuI	GTATCC	1 cut(s)	177
BglII	AGATCT	1 cut(s)	208
BisI	GCNGC	9 cut(s)	105, 218, 221, 345, 905, 1727, 1884, 1948, 1951
BlsI	GCNGC	9 cut(s)	106, 219, 222, 346, 906, 1728, 1885, 1949, 1952
BmcAI	AGTACT	1 cut(s)	1319
Bme1390I	CCNGG	5 cut(s)	181, 242, 1033, 1299, 1908
Bme18I	GGWCC	1 cut(s)	238
BmeRI	GACNNNNNGTC	1 cut(s)	1719
BmgBI	CACGTC	1 cut(s)	740
BmgT120I	GGNCC	2 cut(s)	238, 1616
BmiI	GGNNCC	7 cut(s)	1292, 1601, 1618, 1829, 1849, 1999, 2020
BmrFI	CCNGG	5 cut(s)	181, 242, 1033, 1299, 1908
BmrI	ACTGGG	1 cut(s)	592
BmsI	GCATC	3 cut(s)	331, 1124, 1247
BmtI	GCTAGC	1 cut(s)	410
BmuI	ACTGGG	1 cut(s)	592
BpiI	GAAGAC	1 cut(s)	27
BpmI	CTGGAG	1 cut(s)	1214
Bpu14I	TTCGAA	2 cut(s)	335, 2030
BpuEI	CTTGAG	1 cut(s)	852
BpuMI	CCSGG	3 cut(s)	181, 242, 1299
BsaHI	GRCGYC	2 cut(s)	51, 140
BsaI	GGTCTC	1 cut(s)	1001
BsaJI	CCNNGG	6 cut(s)	81, 971, 1032, 1502, 1831, 1907
BsaWI	WCCGGW	3 cut(s)	5, 1494, 1589
BsaXI	ACNNNNNCTCC	2 cut(s)	1819, 1849
Bsc4I	CCNNNNNNNGG	3 cut(s)	111, 1459, 1596
Bse118I	RCCGGY	2 cut(s)	5, 645
Bse1I	ACTGG	8 cut(s)	192, 598, 727, 1100, 1398, 1636, 1849, 1924
Bse21I	CCTNAGG	1 cut(s)	1019
Bse3DI	GCAATG	2 cut(s)	1878, 1960
BseBI	CCWGG	2 cut(s)	1033, 1908
BseDI	CCNNGG	6 cut(s)	81, 971, 1032, 1502, 1831, 1907
BseGI	GGATG	8 cut(s)	524, 559, 684, 1349, 1491, 1774, 1978, 2046
BseLI	CCNNNNNNNGG	3 cut(s)	111, 1459, 1596
BseMI	GCAATG	2 cut(s)	1878, 1960
BseMII	CTCAG	5 cut(s)	380, 389, 956, 1010, 1529
BseNI	ACTGG	8 cut(s)	192, 598, 727, 1100, 1398, 1636, 1849, 1924
BseRI	GAGGAG	2 cut(s)	1060, 1254
BseSI	GKGCMC	2 cut(s)	482, 1295
BseX3I	CGGCCG	1 cut(s)	102
BseXI	GCAGC	8 cut(s)	204, 232, 331, 891, 1713, 1895, 1959, 1962
BseYI	CCCAGC	1 cut(s)	1823
BsgI	GTGCAG	1 cut(s)	798
Bsh1236I	CGCG	3 cut(s)	107, 287, 294
Bsh1285I	CGRYCG	4 cut(s)	58, 70, 105, 1077
BshFI	GGCC	5 cut(s)	104, 561, 645, 1507, 1617
BshNI	GGYRCC	3 cut(s)	1290, 1599, 2018
BshTI	ACCGGT	1 cut(s)	5
BsiEI	CGRYCG	4 cut(s)	58, 70, 105, 1077
BsiHKAI	GWGCWC	2 cut(s)	125, 605
BsiSI	CCGG	9 cut(s)	6, 126, 180, 241, 646, 1299, 1344, 1495, 1590
BslFI	GGGAC	4 cut(s)	215, 1000, 1070, 1258
BslI	CCNNNNNNNGG	3 cut(s)	111, 1459, 1596
BsmAI	GTCTC	2 cut(s)	1001, 1706
BsmFI	GGGAC	4 cut(s)	215, 1000, 1070, 1258
BsmI	GAATGC	3 cut(s)	334, 408, 1635
BsnI	GGCC	5 cut(s)	104, 561, 645, 1507, 1617
Bso31I	GGTCTC	1 cut(s)	1001
Bsp119I	TTCGAA	2 cut(s)	335, 2030
Bsp1286I	GDGCHC	4 cut(s)	125, 482, 605, 1295
BspACI	CCGC	6 cut(s)	105, 172, 392, 801, 1073, 1760
BspANI	GGCC	5 cut(s)	104, 561, 645, 1507, 1617
BspCNI	CTCAG	5 cut(s)	379, 388, 957, 1011, 1528
BspFNI	CGCG	3 cut(s)	107, 287, 294
BspLI	GGNNCC	7 cut(s)	1292, 1601, 1618, 1829, 1849, 1999, 2020
BspMAI	CTGCAG	2 cut(s)	222, 349
BspMI	ACCTGC	3 cut(s)	265, 1402, 1786
BspOI	GCTAGC	1 cut(s)	410
BspPI	GGATC	8 cut(s)	693, 790, 811, 1309, 1516, 1987, 1992, 2005
BspQI	GCTCTTC	2 cut(s)	162, 1591
BspT104I	TTCGAA	2 cut(s)	335, 2030
BspT107I	GGYRCC	3 cut(s)	1290, 1599, 2018
BspTNI	GGTCTC	1 cut(s)	1001
BsrBI	CCGCTC	1 cut(s)	172
BsrDI	GCAATG	2 cut(s)	1878, 1960
BsrFI	RCCGGY	2 cut(s)	5, 645
BsrI	ACTGG	8 cut(s)	192, 598, 727, 1100, 1398, 1636, 1849, 1924
BssAI	RCCGGY	2 cut(s)	5, 645
BssECI	CCNNGG	6 cut(s)	81, 971, 1032, 1502, 1831, 1907
BssNI	GRCGYC	2 cut(s)	51, 140
BssT1I	CCWWGG	2 cut(s)	971, 1502
Bst2UI	CCWGG	2 cut(s)	1033, 1908
Bst4CI	ACNGT	5 cut(s)	514, 790, 1216, 1286, 1930
Bst6I	CTCTTC	2 cut(s)	162, 1591
BstACI	GRCGYC	2 cut(s)	51, 140
BstAPI	GCANNNNNTGC	1 cut(s)	1112
BstBI	TTCGAA	2 cut(s)	335, 2030
BstC8I	GCNNGC	4 cut(s)	363, 390, 408, 1615
BstDEI	CTNAG	5 cut(s)	366, 375, 965, 1019, 1515
BstDSI	CCRYGG	1 cut(s)	1831
BstF5I	GGATG	8 cut(s)	524, 559, 684, 1349, 1491, 1774, 1978, 2046
BstFNI	CGCG	3 cut(s)	107, 287, 294
BstH2I	RGCGCY	1 cut(s)	266
BstHHI	GCGC	3 cut(s)	265, 287, 296
BstMAI	GTCTC	2 cut(s)	1001, 1706
BstMCI	CGRYCG	4 cut(s)	58, 70, 105, 1077
BstMWI	GCNNNNNNNGC	9 cut(s)	57, 169, 262, 271, 291, 293, 385, 1112, 1726
BstNI	CCWGG	2 cut(s)	1033, 1908
BstSCI	CCNGG	5 cut(s)	179, 240, 1031, 1297, 1906
BstSFI	CTRYAG	3 cut(s)	218, 345, 609
BstSLI	GKGCMC	2 cut(s)	482, 1295
BstUI	CGCG	3 cut(s)	107, 287, 294
BstV1I	GCAGC	8 cut(s)	204, 232, 331, 891, 1713, 1895, 1959, 1962
BstV2I	GAAGAC	1 cut(s)	27
BstX2I	RGATCY	5 cut(s)	208, 685, 1521, 1979, 1997
BstXI	CCANNNNNNTGG	1 cut(s)	1894
BstYI	RGATCY	5 cut(s)	208, 685, 1521, 1979, 1997
BstZI	CGGCCG	1 cut(s)	102
Bsu36I	CCTNAGG	1 cut(s)	1019
BsuI	GTATCC	1 cut(s)	177
BsuRI	GGCC	5 cut(s)	104, 561, 645, 1507, 1617
BtgI	CCRYGG	1 cut(s)	1831
BtrI	CACGTC	1 cut(s)	740
BtsCI	GGATG	8 cut(s)	524, 559, 684, 1349, 1491, 1774, 1978, 2046
BtsI	GCAGTG	2 cut(s)	257, 1901
BtsIMutI	CAGTG	7 cut(s)	257, 605, 795, 1107, 1615, 1842, 1901
BveI	ACCTGC	3 cut(s)	265, 1402, 1786
Cac8I	GCNNGC	4 cut(s)	363, 390, 408, 1615
CfoI	GCGC	3 cut(s)	265, 287, 296
Cfr10I	RCCGGY	2 cut(s)	5, 645
Cfr13I	GGNCC	2 cut(s)	238, 1616
CseI	GACGC	2 cut(s)	40, 1709
Csp6I	GTAC	3 cut(s)	1318, 1600, 2019
CspAI	ACCGGT	1 cut(s)	5
CspCI	CAANNNNNGTGG	2 cut(s)	1422, 1457
CviAII	CATG	3 cut(s)	1255, 1783, 1888
CviQI	GTAC	3 cut(s)	1318, 1600, 2019
DdeI	CTNAG	5 cut(s)	366, 375, 965, 1019, 1515
DriI	GACNNNNNGTC	1 cut(s)	1719
EaeI	YGGCCR	3 cut(s)	102, 559, 643
EagI	CGGCCG	1 cut(s)	102
Eam1104I	CTCTTC	2 cut(s)	162, 1591
Eam1105I	GACNNNNNGTC	1 cut(s)	1719
EarI	CTCTTC	2 cut(s)	162, 1591
Ecl136II	GAGCTC	1 cut(s)	123
EclXI	CGGCCG	1 cut(s)	102
Eco130I	CCWWGG	2 cut(s)	971, 1502
Eco24I	GRGCYC	1 cut(s)	125
Eco31I	GGTCTC	1 cut(s)	1001
Eco32I	GATATC	1 cut(s)	1914
Eco47I	GGWCC	1 cut(s)	238
Eco47III	AGCGCT	1 cut(s)	264
Eco52I	CGGCCG	1 cut(s)	102
Eco53kI	GAGCTC	1 cut(s)	123
Eco57I	CTGAAG	1 cut(s)	341
Eco81I	CCTNAGG	1 cut(s)	1019
EcoICRI	GAGCTC	1 cut(s)	123
EcoRI	GAATTC	1 cut(s)	86
EcoRII	CCWGG	2 cut(s)	1031, 1906
EcoRV	GATATC	1 cut(s)	1914
EcoT14I	CCWWGG	2 cut(s)	971, 1502
EcoT22I	ATGCAT	1 cut(s)	1117
EcoT38I	GRGCYC	1 cut(s)	125
ErhI	CCWWGG	2 cut(s)	971, 1502
FaeI	CATG	3 cut(s)	1258, 1786, 1891
FalI	AAGNNNNNCTT	4 cut(s)	1495, 1527, 1587, 1619
FaqI	GGGAC	4 cut(s)	215, 1000, 1070, 1258
FatI	CATG	3 cut(s)	1254, 1782, 1887
FbaI	TGATCA	1 cut(s)	690
Fnu4HI	GCNGC	9 cut(s)	105, 218, 221, 345, 905, 1727, 1884, 1948, 1951
FokI	GGATG	8 cut(s)	511, 566, 691, 1336, 1478, 1781, 1985, 2053
FriOI	GRGCYC	1 cut(s)	125
Fsp4HI	GCNGC	9 cut(s)	105, 218, 221, 345, 905, 1727, 1884, 1948, 1951
FspBI	CTAG	3 cut(s)	407, 1707, 1983
GlaI	GCGC	3 cut(s)	264, 286, 295
GluI	GCNGC	9 cut(s)	105, 218, 221, 345, 905, 1727, 1884, 1948, 1951
GsaI	CCCAGC	1 cut(s)	1827
GsuI	CTGGAG	1 cut(s)	1214
HaeII	RGCGCY	1 cut(s)	266
HaeIII	GGCC	5 cut(s)	104, 561, 645, 1507, 1617
HapII	CCGG	9 cut(s)	6, 126, 180, 241, 646, 1299, 1344, 1495, 1590
HgaI	GACGC	2 cut(s)	40, 1709
HhaI	GCGC	3 cut(s)	265, 287, 296
Hin1I	GRCGYC	2 cut(s)	51, 140
Hin1II	CATG	3 cut(s)	1258, 1786, 1891
Hin6I	GCGC	3 cut(s)	263, 285, 294
HinP1I	GCGC	3 cut(s)	263, 285, 294
HincII	GTYRAC	5 cut(s)	177, 372, 720, 888, 1419
HindII	GTYRAC	5 cut(s)	177, 372, 720, 888, 1419
HpaI	GTTAAC	1 cut(s)	720
HpaII	CCGG	9 cut(s)	6, 126, 180, 241, 646, 1299, 1344, 1495, 1590
HphI	GGTGA	4 cut(s)	571, 752, 1089, 1749
Hpy166II	GTNNAC	6 cut(s)	177, 372, 720, 888, 1419, 1561
Hpy188I	TCNGA	5 cut(s)	67, 529, 678, 690, 1135
Hpy188III	TCNNGA	6 cut(s)	118, 694, 869, 912, 1193, 1481
Hpy8I	GTNNAC	6 cut(s)	177, 372, 720, 888, 1419, 1561
Hpy99I	CGWCG	9 cut(s)	41, 50, 56, 103, 142, 145, 148, 1725, 1859
HpyAV	CCTTC	8 cut(s)	188, 344, 676, 773, 931, 1540, 1693, 2032
HpyCH4III	ACNGT	5 cut(s)	514, 790, 1216, 1286, 1930
HpyCH4IV	ACGT	4 cut(s)	140, 535, 739, 1857
HpyF10VI	GCNNNNNNNGC	9 cut(s)	57, 169, 262, 271, 291, 293, 385, 1112, 1726
HpyF3I	CTNAG	5 cut(s)	366, 375, 965, 1019, 1515
HpySE526I	ACGT	4 cut(s)	140, 535, 739, 1857
Hsp92I	GRCGYC	2 cut(s)	51, 140
Hsp92II	CATG	3 cut(s)	1258, 1786, 1891
HspAI	GCGC	3 cut(s)	263, 285, 294
KpnI	GGTACC	2 cut(s)	1603, 2022
Ksp22I	TGATCA	1 cut(s)	690
KspAI	GTTAAC	1 cut(s)	720
LguI	GCTCTTC	2 cut(s)	162, 1591
LmnI	GCTCC	5 cut(s)	120, 128, 134, 850, 1827
Lsp1109I	GCAGC	8 cut(s)	204, 232, 331, 891, 1713, 1895, 1959, 1962
LweI	GCATC	3 cut(s)	331, 1124, 1247
MaeI	CTAG	3 cut(s)	407, 1707, 1983
MaeII	ACGT	4 cut(s)	140, 535, 739, 1857
MaeIII	GTNAC	2 cut(s)	735, 1197
MbiI	CCGCTC	1 cut(s)	172
MboII	GAAGA	8 cut(s)	32, 179, 334, 1170, 1374, 1469, 1578, 2021
MflI	RGATCY	5 cut(s)	208, 685, 1521, 1979, 1997
MhlI	GDGCHC	4 cut(s)	125, 482, 605, 1295
MlsI	TGGCCA	1 cut(s)	561
MluNI	TGGCCA	1 cut(s)	561
MlyI	GAGTC	6 cut(s)	89, 367, 743, 976, 1205, 1708
MmeI	TCCRAC	7 cut(s)	379, 427, 656, 775, 1243, 1440, 1674
Mox20I	TGGCCA	1 cut(s)	561
Mph1103I	ATGCAT	1 cut(s)	1117
MroXI	GAANNNNTTC	1 cut(s)	24
MscI	TGGCCA	1 cut(s)	561
MseI	TTAA	4 cut(s)	584, 719, 834, 1437
MslI	CAYNNNNRTG	2 cut(s)	765, 1892
Msp20I	TGGCCA	1 cut(s)	561
MspA1I	CMGCKG	3 cut(s)	392, 1073, 1762
MspI	CCGG	9 cut(s)	6, 126, 180, 241, 646, 1299, 1344, 1495, 1590
MspR9I	CCNGG	5 cut(s)	181, 242, 1033, 1299, 1908
Mva1269I	GAATGC	3 cut(s)	334, 408, 1635
MvaI	CCWGG	2 cut(s)	1033, 1908
MvnI	CGCG	3 cut(s)	107, 287, 294
MwoI	GCNNNNNNNGC	9 cut(s)	57, 169, 262, 271, 291, 293, 385, 1112, 1726
NciI	CCSGG	3 cut(s)	181, 242, 1299
NheI	GCTAGC	1 cut(s)	406
NlaIII	CATG	3 cut(s)	1258, 1786, 1891
NlaIV	GGNNCC	7 cut(s)	1292, 1601, 1618, 1829, 1849, 1999, 2020
NmeAIII	GCCGAG	2 cut(s)	106, 739
NmuCI	GTSAC	2 cut(s)	735, 1197
NsiI	ATGCAT	1 cut(s)	1117
NspV	TTCGAA	2 cut(s)	335, 2030
OliI	CACNNNNGTG	1 cut(s)	765
PciSI	GCTCTTC	2 cut(s)	162, 1591
PcsI	WCGNNNNNNNCGW	4 cut(s)	36, 42, 51, 104
PctI	GAATGC	3 cut(s)	334, 408, 1635
PdmI	GAANNNNTTC	1 cut(s)	24
PfeI	GAWTC	9 cut(s)	505, 625, 726, 925, 1358, 1550, 1663, 1672, 1685
PflFI	GACNNNGTC	2 cut(s)	50, 142
PfoI	TCCNGGA	1 cut(s)	1297
PinAI	ACCGGT	1 cut(s)	5
PkrI	GCNGC	9 cut(s)	106, 219, 222, 346, 906, 1728, 1885, 1949, 1952
Ple19I	CGATCG	2 cut(s)	58, 70
PleI	GAGTC	6 cut(s)	89, 367, 742, 975, 1204, 1708
PpsI	GAGTC	6 cut(s)	89, 367, 742, 975, 1204, 1708
Psp124BI	GAGCTC	1 cut(s)	125
Psp6I	CCWGG	2 cut(s)	1031, 1906
PspFI	CCCAGC	1 cut(s)	1823
PspGI	CCWGG	2 cut(s)	1031, 1906
PspN4I	GGNNCC	7 cut(s)	1292, 1601, 1618, 1829, 1849, 1999, 2020
PspPI	GGNCC	2 cut(s)	238, 1616
PsrI	GAACNNNNNNTAC	2 cut(s)	2011, 2043
PstI	CTGCAG	2 cut(s)	222, 349
PsuI	RGATCY	5 cut(s)	208, 685, 1521, 1979, 1997
PsyI	GACNNNGTC	2 cut(s)	50, 142
PvuI	CGATCG	2 cut(s)	58, 70
RsaI	GTAC	3 cut(s)	1319, 1601, 2020
RsaNI	GTAC	3 cut(s)	1318, 1600, 2019
RseI	CAYNNNNRTG	2 cut(s)	765, 1892
SacI	GAGCTC	1 cut(s)	125
SapI	GCTCTTC	2 cut(s)	162, 1591
SaqAI	TTAA	4 cut(s)	584, 719, 834, 1437
SatI	GCNGC	9 cut(s)	105, 218, 221, 345, 905, 1727, 1884, 1948, 1951
Sau96I	GGNCC	2 cut(s)	238, 1616
ScaI	AGTACT	1 cut(s)	1319
SchI	GAGTC	6 cut(s)	89, 367, 743, 976, 1205, 1708
ScrFI	CCNGG	5 cut(s)	181, 242, 1033, 1299, 1908
SduI	GDGCHC	4 cut(s)	125, 482, 605, 1295
SfaNI	GCATC	3 cut(s)	331, 1124, 1247
SfcI	CTRYAG	3 cut(s)	218, 345, 609
SfuI	TTCGAA	2 cut(s)	335, 2030
SinI	GGWCC	1 cut(s)	238
SmiMI	CAYNNNNRTG	2 cut(s)	765, 1892
SmlI	CTYRAG	1 cut(s)	867
SmoI	CTYRAG	1 cut(s)	867
SsiI	CCGC	6 cut(s)	105, 172, 392, 801, 1073, 1760
SspMI	CTAG	3 cut(s)	407, 1707, 1983
SstI	GAGCTC	1 cut(s)	125
StyD4I	CCNGG	5 cut(s)	179, 240, 1031, 1297, 1906
StyI	CCWWGG	2 cut(s)	971, 1502
TaaI	ACNGT	5 cut(s)	514, 790, 1216, 1286, 1930
TaiI	ACGT	4 cut(s)	143, 538, 742, 1860
TaqI	TCGA	8 cut(s)	45, 54, 90, 335, 913, 1077, 1553, 2030
TaqII	GACCGA	1 cut(s)	60
TatI	WGTACW	1 cut(s)	1317
TauI	GCSGC	1 cut(s)	107
TfiI	GAWTC	9 cut(s)	505, 625, 726, 925, 1358, 1550, 1663, 1672, 1685
Tru1I	TTAA	4 cut(s)	584, 719, 834, 1437
Tru9I	TTAA	4 cut(s)	584, 719, 834, 1437
TscAI	CASTG	7 cut(s)	257, 605, 795, 1107, 1615, 1849, 1908
TseFI	GTSAC	2 cut(s)	735, 1197
TseI	GCWGC	8 cut(s)	217, 220, 344, 904, 1726, 1883, 1947, 1950
Tsp45I	GTSAC	2 cut(s)	735, 1197
TspDTI	ATGAA	9 cut(s)	341, 531, 643, 695, 936, 950, 1170, 1676, 2057
TspGWI	ACGGA	1 cut(s)	219
TspRI	CASTG	7 cut(s)	257, 605, 795, 1107, 1615, 1849, 1908
Tth111I	GACNNNGTC	2 cut(s)	50, 142
VpaK11BI	GGWCC	1 cut(s)	238
XapI	RAATTY	3 cut(s)	86, 943, 1245
XmnI	GAANNNNTTC	1 cut(s)	24
XspI	CTAG	3 cut(s)	407, 1707, 1983
ZraI	GACGTC	1 cut(s)	141
ZrmI	AGTACT	1 cut(s)	1319
Zsp2I	ATGCAT	1 cut(s)	1117

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.