Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb7

Orthogroup ID

OG0007878

Physical Location & Seq

Genomic Coordinates Reverse (-)

20491713 .. 20495590

Gene Structure 3878 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_7g27380.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1677 bp

ATGGCGCCCAAAACCCTCTCCTCCTTCCTCTCTCCCTTCACCCTAAACACTATCCCCACCACCAAGGTCCCCAACCACCACACCAACCCCTCTCTCATCCTCTGCCGTTTCTCTCCTTCCCACCCCAAACCACCGCTCCCGGAGCCCCGCTTACCCGAACCCGAAGGCACCGGCGCCGCCGCCCCCACCCCCGGCGACCGCTTCCTCGAAAGCCGCCGCTCCTTCGACGCCGCGAAGATCATTCTCAAGGAGAAGAAGAAGAAGCGCCTCAAGGAGAAGCCTCTGAAGCTCTCCACCGCCGTCGCTTGCTGCTACGGCTGCGGAGCTCCGTTACAGACTTCGGAGCCGGATGCTCCGGGTTATTCCGACCCGGAGACATATGCATTGAAGAAGAAGCACCACCAGCTTAAAACTGTTATATGTGGAAGATGCAAGCTTCTGTCTCATGGTCATATGATAACTGCTGTGGGCGGGAATGGGGGTTATTCTGGCGGGAAACAGTTCATCATGGCGGAGCAGCTTCGGGAGAAGCTTTCGCATTTGCGCTACGAGAGAGCGCTGATAGTTAAATTGGTTGATATTGTGGACTTCAATGGTAGCTTTTTGGCTCGTGTGCGTGATTTGGCCGGTGCGAATCCCATTATATTAGTCATTACTAAGATCGATTTACTTCCCAAGGGGACTGATTTTAATTGCATTGGTGATTGGGTTGTAGAGGCCACTGTAAAGAAGAAGCTTAATGTTATGAGCGTTCATCTGACGAGTTCAAAGTCTTTGGTTGGAGTAGCTGGAGTTGCATCAGAGATTCAAAAGGAAAAGAAGGGGCGCGACGTGTATGTTATGGGCTCCGCAAATGTTGGGAAATCAGCTTTCATCAGTGCTTTACTGAAACTGATGGCGGAAAAGGATCCAGTTGCCGCATCAGCGCAAAAGTACAAACCAATACAATCTGCTGTTCCTGGAACTACCTTGGGTCCAATTCAAATCAACGCTTTCCTAGGAGGAGGGAAATTATATGACACACCTGGAGTTCATCTCCACCATAGGCAAGCAGCAGTGGTTCATTCAGAAGACCTACCTTCCCTTGCTCCTCAAAGTCGTCTTAGGGGTCAATCTTTGCCTAATTCTCAGGTTTCTGGAAATGGAACAACAAGGAAAGGCAATTCCAATGACTTGATTGGCTATTCAATATTCTGGGGAGGTCTTGTCAGAGTAGATGTCTTAAAGGTTCTCCCTGAAACACGTTTAACGTTTTATGGGCCAAAGAGTCTTCAGATTCATATGGTACCAACTGATGAGGCAGATGAATTTTACCAGAAACACGTTGGAGTCTTACTGACACCTCCAACTGGGAAAGAAAGAGCAGATGAATGGAGAGGTCTCGACTCTCAGCGTCAAGTGCAAATAAAAGTTGAAGATGTGCAAAGGCCAGCATGTGATGTGGCTATATCAGGCTTAGGGTGGATTAGTATTGAACCTATTTGCAGATTATTAAGAAGTTCTGATTCAAATTCAGAAAAAACTGCAGGGGAACTGCATTTAGCTGTGCATGTCCCCAAGCCAGTCGAAATATTTGTTAGGTCTCCAATCCCAGCGGGCAAGTCTGGAGCAGAGTGGTATCAGTACCGGGAGTTGACCGAAAAAGAAGAGGAAGAAAGACCCAAATGGCATTATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0001101 GO:0001505 GO:0003674 GO:0003824 GO:0003924 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006109 GO:0006807 GO:0006809 GO:0006950 GO:0006970 GO:0006979 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009507 GO:0009536 GO:0009628 GO:0009651 GO:0009657 GO:0009668 GO:0009889 GO:0009987 GO:0010027 GO:0010035 GO:0010193 GO:0010322 GO:0010565 GO:0010675 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017111 GO:0017144 GO:0019216 GO:0019220 GO:0019222 GO:0019747 GO:0022613 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0034641 GO:0042133 GO:0042136 GO:0042221 GO:0042254 GO:0042493 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044085 GO:0044237 GO:0044249 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0046209 GO:0046677 GO:0046890 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051174 GO:0051246 GO:0060255 GO:0061024 GO:0062012 GO:0065007 GO:0065008 GO:0071071 GO:0071840 GO:0072593 GO:0080090 GO:0099402 GO:1901700 GO:1903409 GO:1903725 GO:2001057

KEGG Pathways

Metabolic & Signaling

ko00220 ko00330 ko01100 ko01110 ko01130 ko04626 map00220 map00330 map01100 map01110 map01130 map04626

Pfam Domains

Protein Families

MMR_HSR1

Protein Analysis

559

Amino Acids

61.11

Weight (kDa)

9.34

Isoelectric Point (pI)

39.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
YqeH-like_C	PF21516	408 - 485	1.1e-11	YqeH-like, C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007878)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G47450 AT3G47450
fragaria_vesca	FvH4_7g25681 FvH4_7g27380 FvH4_7g27380 FvH4_7g28391
malus_domestica	MD07G1252900.v1.1
prunus_persica	Prupe.2G276500_v2.0.a1
pyrus_communis	pycom07g22550
rosa_chinensis	RchiOBHm_Chr1g0374211
rosa_laevigata	RLG00000026755
rosa_multiflora	Rmu_co8240197.1_g000001 Rmu_ssc0000007.1_g000041 Rmu_ssc0000450.1_g000005
rosa_roxburghii	Rroxscaffold_3G00227680 Rroxscaffold_4G00283640 Rroxscaffold_7G00194520
rosa_rugosa	Rorug01G0381400 Rorug01G0381500
rosa_samantha	Rh1AG392400 Rh1BG356400 Rh1CG369400 Rh1DG386900
rosa_wichuraiana	Rw1G034330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1285
AccB1I	GGYRCC	4 cut(s)	4, 167, 173, 1285
AccBSI	CCGCTC	2 cut(s)	136, 219
AccII	CGCG	2 cut(s)	233, 828
AclI	AACGTT	1 cut(s)	1250
AclWI	GGATC	2 cut(s)	902, 915
AcoI	YGGCCR	1 cut(s)	624
AcsI	RAATTY	2 cut(s)	1307, 1510
AcuI	CTGAAG	2 cut(s)	305, 1256
AcyI	GRCGYC	3 cut(s)	5, 174, 228
AfaI	GTAC	3 cut(s)	935, 1287, 1625
AfeI	AGCGCT	1 cut(s)	558
AfiI	CCNNNNNNNGG	2 cut(s)	191, 1349
AflIII	ACRYGT	3 cut(s)	831, 1241, 1321
AgsI	TTSAA	9 cut(s)	388, 592, 768, 809, 983, 1188, 1415, 1475, 1509
AjiI	CACGTC	1 cut(s)	832
AjnI	CCWGG	2 cut(s)	958, 1024
Alw21I	GWGCWC	1 cut(s)	328
Alw26I	GTCTC	4 cut(s)	368, 447, 1385, 1587
AlwI	GGATC	2 cut(s)	902, 915
Aor51HI	AGCGCT	1 cut(s)	558
AoxI	GGCC	4 cut(s)	624, 717, 1259, 1427
ApeKI	GCWGC	4 cut(s)	309, 318, 517, 1052
ApoI	RAATTY	2 cut(s)	1307, 1510
Asp700I	GAANNNNTTC	1 cut(s)	500
Asp718I	GGTACC	1 cut(s)	1285
AspA2I	CCTAGG	1 cut(s)	997
AspLEI	GCGC	7 cut(s)	7, 176, 267, 546, 559, 828, 928
AspS9I	GGNCC	3 cut(s)	67, 974, 1259
AsuC2I	CCSGG	5 cut(s)	140, 192, 357, 371, 1628
AsuHPI	GGTGA	2 cut(s)	31, 713
AvaII	GGWCC	2 cut(s)	67, 974
AvrII	CCTAGG	1 cut(s)	997
BamHI	GGATCC	1 cut(s)	907
BanI	GGYRCC	4 cut(s)	4, 167, 173, 1285
BanII	GRGCYC	3 cut(s)	147, 328, 848
BauI	CACGAG	1 cut(s)	609
BbsI	GAAGAC	2 cut(s)	1077, 1262
Bbv12I	GWGCWC	1 cut(s)	328
BbvI	GCAGC	4 cut(s)	296, 305, 529, 1064
BccI	CCATC	1 cut(s)	889
BceAI	ACGGC	3 cut(s)	90, 284, 331
BciT130I	CCWGG	2 cut(s)	960, 1026
BcnI	CCSGG	5 cut(s)	140, 192, 357, 371, 1628
BcoDI	GTCTC	4 cut(s)	368, 447, 1385, 1587
BfaI	CTAG	1 cut(s)	998
BfmI	CTRYAG	1 cut(s)	1524
BfoI	RGCGCY	4 cut(s)	8, 177, 268, 560
BlnI	CCTAGG	1 cut(s)	997
Bme1390I	CCNGG	7 cut(s)	140, 192, 357, 371, 960, 1026, 1628
Bme18I	GGWCC	2 cut(s)	67, 974
BmgBI	CACGTC	1 cut(s)	832
BmgT120I	GGNCC	3 cut(s)	67, 974, 1259
BmrFI	CCNGG	7 cut(s)	140, 192, 357, 371, 960, 1026, 1628
BmrI	ACTGGG	1 cut(s)	1359
BmsI	GCATC	4 cut(s)	340, 419, 806, 929
BmuI	ACTGGG	1 cut(s)	1359
BpiI	GAAGAC	2 cut(s)	1077, 1262
BplI	GAGNNNNNCTC	2 cut(s)	1020, 1052
BpmI	CTGGAG	3 cut(s)	810, 1047, 1626
Bpu10I	CCTNAGC	1 cut(s)	1456
BpuEI	CTTGAG	2 cut(s)	230, 254
BpuMI	CCSGG	5 cut(s)	140, 192, 357, 371, 1628
Bsa29I	ATCGAT	1 cut(s)	663
BsaHI	GRCGYC	3 cut(s)	5, 174, 228
BsaI	GGTCTC	2 cut(s)	1385, 1587
BsaJI	CCNNGG	5 cut(s)	63, 190, 675, 969, 997
BsaXI	ACNNNNNCTCC	4 cut(s)	120, 150, 1191, 1221
Bsc4I	CCNNNNNNNGG	2 cut(s)	191, 1349
Bse118I	RCCGGY	2 cut(s)	170, 626
Bse1I	ACTGG	3 cut(s)	911, 1354, 1562
BseBI	CCWGG	2 cut(s)	960, 1026
BseCI	ATCGAT	1 cut(s)	663
BseDI	CCNNGG	5 cut(s)	63, 190, 675, 969, 997
BseGI	GGATG	2 cut(s)	96, 355
BseLI	CCNNNNNNNGG	2 cut(s)	191, 1349
BseMII	CTCAG	2 cut(s)	1142, 1403
BseNI	ACTGG	3 cut(s)	911, 1354, 1562
BseRI	GAGGAG	3 cut(s)	10, 1017, 1080
BseXI	GCAGC	4 cut(s)	296, 305, 529, 1064
BseYI	CCCAGC	1 cut(s)	1591
Bsh1236I	CGCG	2 cut(s)	233, 828
Bsh1285I	CGRYCG	1 cut(s)	199
BshFI	GGCC	4 cut(s)	626, 719, 1261, 1429
BshNI	GGYRCC	4 cut(s)	4, 167, 173, 1285
BshVI	ATCGAT	1 cut(s)	663
BsiEI	CGRYCG	1 cut(s)	199
BsiHKAI	GWGCWC	1 cut(s)	328
BsiSI	CCGG	8 cut(s)	140, 171, 192, 347, 356, 371, 627, 1627
BslFI	GGGAC	3 cut(s)	53, 694, 1538
BslI	CCNNNNNNNGG	2 cut(s)	191, 1349
BsmAI	GTCTC	4 cut(s)	368, 447, 1385, 1587
BsmFI	GGGAC	3 cut(s)	53, 694, 1538
BsnI	GGCC	4 cut(s)	626, 719, 1261, 1429
Bso31I	GGTCTC	2 cut(s)	1385, 1587
Bsp1286I	GDGCHC	3 cut(s)	147, 328, 848
Bsp143I	GATC	3 cut(s)	237, 660, 907
BspANI	GGCC	4 cut(s)	626, 719, 1261, 1429
BspCNI	CTCAG	2 cut(s)	1141, 1402
BspDI	ATCGAT	1 cut(s)	663
BspFNI	CGCG	2 cut(s)	233, 828
BspMAI	CTGCAG	1 cut(s)	1528
BspPI	GGATC	2 cut(s)	902, 915
BspT107I	GGYRCC	4 cut(s)	4, 167, 173, 1285
BspTNI	GGTCTC	2 cut(s)	1385, 1587
BsrBI	CCGCTC	2 cut(s)	136, 219
BsrFI	RCCGGY	2 cut(s)	170, 626
BsrI	ACTGG	3 cut(s)	911, 1354, 1562
BssAI	RCCGGY	2 cut(s)	170, 626
BssECI	CCNNGG	5 cut(s)	63, 190, 675, 969, 997
BssMI	GATC	3 cut(s)	237, 660, 907
BssNI	GRCGYC	3 cut(s)	5, 174, 228
BssSI	CACGAG	1 cut(s)	609
BssT1I	CCWWGG	4 cut(s)	63, 675, 969, 997
Bst2BI	CACGAG	1 cut(s)	609
Bst2UI	CCWGG	2 cut(s)	960, 1026
Bst4CI	ACNGT	3 cut(s)	415, 501, 724
Bst6I	CTCTTC	1 cut(s)	1641
BstACI	GRCGYC	3 cut(s)	5, 174, 228
BstC8I	GCNNGC	5 cut(s)	307, 434, 1050, 1431, 1597
BstDEI	CTNAG	5 cut(s)	657, 1103, 1128, 1389, 1456
BstF5I	GGATG	2 cut(s)	96, 355
BstFNI	CGCG	2 cut(s)	233, 828
BstH2I	RGCGCY	4 cut(s)	8, 177, 268, 560
BstHHI	GCGC	7 cut(s)	7, 176, 267, 546, 559, 828, 928
BstKTI	GATC	3 cut(s)	240, 663, 910
BstMAI	GTCTC	4 cut(s)	368, 447, 1385, 1587
BstMBI	GATC	3 cut(s)	237, 660, 907
BstMCI	CGRYCG	1 cut(s)	199
BstMWI	GCNNNNNNNGC	8 cut(s)	142, 286, 315, 318, 403, 794, 923, 1399
BstNI	CCWGG	2 cut(s)	960, 1026
BstNSI	RCATGY	2 cut(s)	1437, 1553
BstSCI	CCNGG	7 cut(s)	138, 190, 355, 369, 958, 1024, 1626
BstSFI	CTRYAG	1 cut(s)	1524
BstUI	CGCG	2 cut(s)	233, 828
BstV1I	GCAGC	4 cut(s)	296, 305, 529, 1064
BstV2I	GAAGAC	2 cut(s)	1077, 1262
BstX2I	RGATCY	1 cut(s)	907
BstYI	RGATCY	1 cut(s)	907
Bsu15I	ATCGAT	1 cut(s)	663
BsuRI	GGCC	4 cut(s)	626, 719, 1261, 1429
BsuTUI	ATCGAT	1 cut(s)	663
BtrI	CACGTC	1 cut(s)	832
BtsCI	GGATG	2 cut(s)	96, 355
BtsI	GCAGTG	1 cut(s)	1062
BtsIMutI	CAGTG	3 cut(s)	720, 883, 1062
Cac8I	GCNNGC	5 cut(s)	307, 434, 1050, 1431, 1597
CfoI	GCGC	7 cut(s)	7, 176, 267, 546, 559, 828, 928
Cfr10I	RCCGGY	2 cut(s)	170, 626
Cfr13I	GGNCC	3 cut(s)	67, 974, 1259
ClaI	ATCGAT	1 cut(s)	663
CseI	GACGC	2 cut(s)	236, 1382
Csp6I	GTAC	3 cut(s)	934, 1286, 1624
CviAII	CATG	4 cut(s)	446, 508, 1434, 1550
CviQI	GTAC	3 cut(s)	934, 1286, 1624
DdeI	CTNAG	5 cut(s)	657, 1103, 1128, 1389, 1456
DinI	GGCGCC	2 cut(s)	6, 175
DpnI	GATC	3 cut(s)	239, 662, 909
DpnII	GATC	3 cut(s)	237, 660, 907
EaeI	YGGCCR	1 cut(s)	624
Eam1104I	CTCTTC	1 cut(s)	1641
EarI	CTCTTC	1 cut(s)	1641
EciI	GGCGGA	2 cut(s)	527, 914
Ecl136II	GAGCTC	1 cut(s)	326
Eco130I	CCWWGG	4 cut(s)	63, 675, 969, 997
Eco24I	GRGCYC	3 cut(s)	147, 328, 848
Eco31I	GGTCTC	2 cut(s)	1385, 1587
Eco47I	GGWCC	2 cut(s)	67, 974
Eco47III	AGCGCT	1 cut(s)	558
Eco53kI	GAGCTC	1 cut(s)	326
Eco57I	CTGAAG	2 cut(s)	305, 1256
EcoICRI	GAGCTC	1 cut(s)	326
EcoO109I	RGGNCCY	1 cut(s)	67
EcoRII	CCWGG	2 cut(s)	958, 1024
EcoT14I	CCWWGG	4 cut(s)	63, 675, 969, 997
EcoT22I	ATGCAT	1 cut(s)	385
EcoT38I	GRGCYC	3 cut(s)	147, 328, 848
EgeI	GGCGCC	2 cut(s)	6, 175
EheI	GGCGCC	2 cut(s)	6, 175
ErhI	CCWWGG	4 cut(s)	63, 675, 969, 997
FaeI	CATG	4 cut(s)	449, 511, 1437, 1553
FaqI	GGGAC	3 cut(s)	53, 694, 1538
FatI	CATG	4 cut(s)	445, 507, 1433, 1549
FauI	CCCGC	4 cut(s)	155, 464, 485, 1588
FauNDI	CATATG	3 cut(s)	379, 453, 1281
FokI	GGATG	2 cut(s)	83, 362
FriOI	GRGCYC	3 cut(s)	147, 328, 848
FspBI	CTAG	1 cut(s)	998
GlaI	GCGC	7 cut(s)	6, 175, 266, 545, 558, 827, 927
GsaI	CCCAGC	1 cut(s)	1595
GsuI	CTGGAG	3 cut(s)	810, 1047, 1626
HaeII	RGCGCY	4 cut(s)	8, 177, 268, 560
HaeIII	GGCC	4 cut(s)	626, 719, 1261, 1429
HapII	CCGG	8 cut(s)	140, 171, 192, 347, 356, 371, 627, 1627
HgaI	GACGC	2 cut(s)	236, 1382
HhaI	GCGC	7 cut(s)	7, 176, 267, 546, 559, 828, 928
Hin1I	GRCGYC	3 cut(s)	5, 174, 228
Hin1II	CATG	4 cut(s)	449, 511, 1437, 1553
Hin6I	GCGC	7 cut(s)	5, 174, 265, 544, 557, 826, 926
HinP1I	GCGC	7 cut(s)	5, 174, 265, 544, 557, 826, 926
HincII	GTYRAC	1 cut(s)	1635
HindII	GTYRAC	1 cut(s)	1635
HindIII	AAGCTT	3 cut(s)	434, 530, 734
HinfI	GANTC	7 cut(s)	634, 805, 1267, 1276, 1329, 1385, 1505
HpaII	CCGG	8 cut(s)	140, 171, 192, 347, 356, 371, 627, 1627
HphI	GGTGA	2 cut(s)	31, 713
Hpy166II	GTNNAC	2 cut(s)	586, 1635
Hpy188III	TCNNGA	4 cut(s)	524, 1137, 1382, 1605
Hpy8I	GTNNAC	2 cut(s)	586, 1635
Hpy99I	CGWCG	3 cut(s)	230, 305, 833
HpyAV	CCTTC	7 cut(s)	34, 46, 126, 158, 232, 814, 1089
HpyCH4III	ACNGT	3 cut(s)	415, 501, 724
HpyCH4IV	ACGT	4 cut(s)	831, 1243, 1250, 1323
HpyF10VI	GCNNNNNNNGC	8 cut(s)	142, 286, 315, 318, 403, 794, 923, 1399
HpyF3I	CTNAG	5 cut(s)	657, 1103, 1128, 1389, 1456
HpySE526I	ACGT	4 cut(s)	831, 1243, 1250, 1323
Hsp92I	GRCGYC	3 cut(s)	5, 174, 228
Hsp92II	CATG	4 cut(s)	449, 511, 1437, 1553
HspAI	GCGC	7 cut(s)	5, 174, 265, 544, 557, 826, 926
KasI	GGCGCC	2 cut(s)	4, 173
KpnI	GGTACC	1 cut(s)	1289
Kzo9I	GATC	3 cut(s)	237, 660, 907
Lsp1109I	GCAGC	4 cut(s)	296, 305, 529, 1064
LweI	GCATC	4 cut(s)	340, 419, 806, 929
MaeI	CTAG	1 cut(s)	998
MaeII	ACGT	4 cut(s)	831, 1243, 1250, 1323
MaeIII	GTNAC	1 cut(s)	330
MalI	GATC	3 cut(s)	239, 662, 909
MbiI	CCGCTC	2 cut(s)	136, 219
MboI	GATC	3 cut(s)	237, 660, 907
MflI	RGATCY	1 cut(s)	907
MhlI	GDGCHC	3 cut(s)	147, 328, 848
MluCI	AATT	8 cut(s)	569, 691, 978, 1010, 1123, 1162, 1307, 1510
Mly113I	GGCGCC	2 cut(s)	5, 174
MlyI	GAGTC	3 cut(s)	1276, 1338, 1379
MmeI	TCCRAC	4 cut(s)	390, 760, 1306, 1370
Mph1103I	ATGCAT	1 cut(s)	385
MroXI	GAANNNNTTC	1 cut(s)	500
MseI	TTAA	7 cut(s)	408, 567, 690, 738, 1223, 1247, 1493
MspA1I	CMGCKG	1 cut(s)	1595
MspI	CCGG	8 cut(s)	140, 171, 192, 347, 356, 371, 627, 1627
MspR9I	CCNGG	7 cut(s)	140, 192, 357, 371, 960, 1026, 1628
MvaI	CCWGG	2 cut(s)	960, 1026
MvnI	CGCG	2 cut(s)	233, 828
MwoI	GCNNNNNNNGC	8 cut(s)	142, 286, 315, 318, 403, 794, 923, 1399
NarI	GGCGCC	2 cut(s)	5, 174
NciI	CCSGG	5 cut(s)	140, 192, 357, 371, 1628
NdeI	CATATG	3 cut(s)	379, 453, 1281
NdeII	GATC	3 cut(s)	237, 660, 907
NlaIII	CATG	4 cut(s)	449, 511, 1437, 1553
NsiI	ATGCAT	1 cut(s)	385
NspI	RCATGY	2 cut(s)	1437, 1553
PdmI	GAANNNNTTC	1 cut(s)	500
PfeI	GAWTC	4 cut(s)	634, 805, 1276, 1505
PfoI	TCCNGGA	2 cut(s)	138, 958
PleI	GAGTC	3 cut(s)	1275, 1337, 1379
PluTI	GGCGCC	2 cut(s)	8, 177
PpsI	GAGTC	3 cut(s)	1275, 1337, 1379
PpuMI	RGGWCCY	1 cut(s)	67
Psp124BI	GAGCTC	1 cut(s)	328
Psp1406I	AACGTT	1 cut(s)	1250
Psp5II	RGGWCCY	1 cut(s)	67
Psp6I	CCWGG	2 cut(s)	958, 1024
PspFI	CCCAGC	1 cut(s)	1591
PspGI	CCWGG	2 cut(s)	958, 1024
PspPI	GGNCC	3 cut(s)	67, 974, 1259
PspPPI	RGGWCCY	1 cut(s)	67
PstI	CTGCAG	1 cut(s)	1528
PsuI	RGATCY	1 cut(s)	907
RsaI	GTAC	3 cut(s)	935, 1287, 1625
RsaNI	GTAC	3 cut(s)	934, 1286, 1624
SacI	GAGCTC	1 cut(s)	328
SaqAI	TTAA	7 cut(s)	408, 567, 690, 738, 1223, 1247, 1493
Sau3AI	GATC	3 cut(s)	237, 660, 907
Sau96I	GGNCC	3 cut(s)	67, 974, 1259
SchI	GAGTC	3 cut(s)	1276, 1338, 1379
ScrFI	CCNGG	7 cut(s)	140, 192, 357, 371, 960, 1026, 1628
SduI	GDGCHC	3 cut(s)	147, 328, 848
SfaNI	GCATC	4 cut(s)	340, 419, 806, 929
SfcI	CTRYAG	1 cut(s)	1524
SfoI	GGCGCC	2 cut(s)	6, 175
SgrAI	CRCCGGYG	1 cut(s)	170
SinI	GGWCC	2 cut(s)	67, 974
SmlI	CTYRAG	2 cut(s)	245, 269
SmoI	CTYRAG	2 cut(s)	245, 269
Sse9I	AATT	8 cut(s)	569, 691, 978, 1010, 1123, 1162, 1307, 1510
SspDI	GGCGCC	2 cut(s)	4, 173
SspI	AATATT	2 cut(s)	1191, 1572
SspMI	CTAG	1 cut(s)	998
SstI	GAGCTC	1 cut(s)	328
StyD4I	CCNGG	7 cut(s)	138, 190, 355, 369, 958, 1024, 1626
StyI	CCWWGG	4 cut(s)	63, 675, 969, 997
TaaI	ACNGT	3 cut(s)	415, 501, 724
TaiI	ACGT	4 cut(s)	834, 1246, 1253, 1326
TaqI	TCGA	5 cut(s)	207, 225, 663, 1383, 1566
TaqII	GACCGA	1 cut(s)	1652
TasI	AATT	8 cut(s)	569, 691, 978, 1010, 1123, 1162, 1307, 1510
TatI	WGTACW	1 cut(s)	933
TauI	GCSGC	6 cut(s)	179, 182, 216, 219, 233, 920
TfiI	GAWTC	4 cut(s)	634, 805, 1276, 1505
Tru1I	TTAA	7 cut(s)	408, 567, 690, 738, 1223, 1247, 1493
Tru9I	TTAA	7 cut(s)	408, 567, 690, 738, 1223, 1247, 1493
TscAI	CASTG	3 cut(s)	727, 883, 1062
TseI	GCWGC	4 cut(s)	309, 318, 517, 1052
TspDTI	ATGAA	8 cut(s)	493, 743, 862, 1022, 1052, 1268, 1320, 1383
TspGWI	ACGGA	1 cut(s)	318
TspRI	CASTG	3 cut(s)	727, 883, 1062
VpaK11BI	GGWCC	2 cut(s)	67, 974
XapI	RAATTY	2 cut(s)	1307, 1510
XceI	RCATGY	2 cut(s)	1437, 1553
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1322
XmaJI	CCTAGG	1 cut(s)	997
XmnI	GAANNNNTTC	1 cut(s)	500
XspI	CTAG	1 cut(s)	998
Zsp2I	ATGCAT	1 cut(s)	385

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.