Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1B

Orthogroup ID

OG0007878

Physical Location & Seq

Genomic Coordinates Reverse (-)

48753816 .. 48757555

Gene Structure 3740 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1BG356400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1419 bp

ATGGCGCCTAAAACCCTCTCCTCCTTCCTCTGTCCCTTCACCTTCACACTCCCCAACCCCAAGCTCCTCAACCTCAACCTCAACCTCCACCCCAACCCCACTCTCATCCTCTGCCGATTCTCTCAGCCCCACCAGAAACCACCCCTCTCGGAGCCCCAGTTACCCCAACCCGAAGGCACCGGAGCCGCCGCACCCACCCCCGGCGACCGCTTCCTCGAAATCCGCCGCTCCTTCGACGCGGCTAAGCTCTTGCTCAAGGAAAAGAAGAAGAAGCGGCTCAAAGAGAAGCCCTTGAAAATTTCCACCGCCGTCGCTTGCTGTTACGGTTGCGGTGCTCCGTTACAGACTTCCGAGCCCGACGCCCCGGGTTATTCCGACCCGGAGACCTATGCATTGAAGAAGAAGCACCACCAGCTTAGAACTGTTATATGTGGAAGGTGCAAGCTTCTGTCTCATGGCCACATGATAACTGCTGTGGGTGGGAATGGTGGTTATTCTGGCGGGAAGCAGTTCATCATGGCAGAACAGCTTCGGGAGAAGCTCTCGCATTTGCGCTACGAGAGAGCGTTGATAGTTAAACTGGGGTCGGCAAATGTTGGGAAATCAGCTTTCATCAGTGCTTTACTGAAACTGATGGCGGAAAAGGATCCAGTTGCTGCATCAGCGCAGAAGTACAAACCAATACAATCTGCTGTTCCTGGAACTACCTTGGGTCCAATTCAAATAAATGCTTTCCTAGGAGGAGGGAAATTATATGATACACCTGGAGTTCACCTCCACCATAGGCAAGCAGCAGTGGTTCATTCAGAAGACCTACCTTCCCTTGCTCCTCAAAGTCGACTTAGGGGTCAATCTTTGCCTAATTCTCAGGTTTCCTCTGGAAATATAACAACATGGAAGGGCAATTCTAATGATTTGAATGGCTATTCAATATTCTGGGGAGGTCTTGTCAGAGTAGATGTCTTGAAGGTTCTCCCTGAAACACGTTTAACATTTTATGGGCCAAAGAGTCTTCAGATTCATATGGTACCCACTGATGAGGCGGATGAATTTTACCAGAAACAAGTTGGAGTTTTATTGACACCTCCAACTGGGAAAGAAAGGGCAGATGAATGGAGAGGACTCGACTCTCAGCGTCAATTGCAGATAAAAGTTGAAGATGTGCAAAGGCCTGCATGTGATGCGGCTATATCAGGCTTAGGATGGATTAGCATCGAACCTATTTGCAGATTATTGAGAAGTTCTGATTCAAATTCAGAAAAAACTGCAGGGGAACTGCATTTAGCTGTGCATGTCCCCAAGCCAGTCGAAATATTTGTTAGGTCTCCAATCCCAGTGGGCAAGTCTGGAGCAGAGTGGTATCAGTATCGGGAGTTGACCGAAAAGGAAGAGGAAGAAAGACCAAAATGGCATTATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0001101 GO:0001505 GO:0003674 GO:0003824 GO:0003924 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006109 GO:0006807 GO:0006809 GO:0006950 GO:0006970 GO:0006979 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009507 GO:0009536 GO:0009628 GO:0009651 GO:0009657 GO:0009668 GO:0009889 GO:0009987 GO:0010027 GO:0010035 GO:0010193 GO:0010322 GO:0010565 GO:0010675 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017111 GO:0017144 GO:0019216 GO:0019220 GO:0019222 GO:0019747 GO:0022613 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0034641 GO:0042133 GO:0042136 GO:0042221 GO:0042254 GO:0042493 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044085 GO:0044237 GO:0044249 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0046209 GO:0046677 GO:0046890 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051174 GO:0051246 GO:0060255 GO:0061024 GO:0062012 GO:0065007 GO:0065008 GO:0071071 GO:0071840 GO:0072593 GO:0080090 GO:0099402 GO:1901700 GO:1903409 GO:1903725 GO:2001057

KEGG Pathways

Metabolic & Signaling

ko00220 ko00330 ko01100 ko01110 ko01130 ko04626 map00220 map00330 map01100 map01110 map01130 map04626

Pfam Domains

Protein Families

MMR_HSR1

Protein Analysis

472

Amino Acids

52.07

Weight (kDa)

9.29

Isoelectric Point (pI)

46.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MMR_HSR1	PF01926	194 - 261	8.3e-06	50S ribosome-binding GTPase
YqeH-like_C	PF21516	329 - 406	3.4e-10	YqeH-like, C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007878)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G47450 AT3G47450
fragaria_vesca	FvH4_7g25681 FvH4_7g27380 FvH4_7g27380 FvH4_7g28391
malus_domestica	MD07G1252900.v1.1
prunus_persica	Prupe.2G276500_v2.0.a1
pyrus_communis	pycom07g22550
rosa_chinensis	RchiOBHm_Chr1g0374211
rosa_laevigata	RLG00000026755
rosa_multiflora	Rmu_co8240197.1_g000001 Rmu_ssc0000007.1_g000041 Rmu_ssc0000450.1_g000005
rosa_roxburghii	Rroxscaffold_3G00227680 Rroxscaffold_4G00283640 Rroxscaffold_7G00194520
rosa_rugosa	Rorug01G0381400 Rorug01G0381500
rosa_samantha	Rh1AG392400 Rh1BG356400 Rh1CG369400 Rh1DG386900
rosa_wichuraiana	Rw1G034330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	846
Acc65I	GGTACC	1 cut(s)	1027
AccB1I	GGYRCC	3 cut(s)	4, 176, 1027
AccBSI	CCGCTC	1 cut(s)	228
AccI	GTMKAC	1 cut(s)	838
AccII	CGCG	1 cut(s)	239
AclWI	GGATC	2 cut(s)	641, 654
AcoI	YGGCCR	1 cut(s)	457
AcsI	RAATTY	3 cut(s)	297, 1049, 1252
AcuI	CTGAAG	1 cut(s)	998
AcyI	GRCGYC	2 cut(s)	5, 360
AfaI	GTAC	2 cut(s)	674, 1029
AfiI	CCNNNNNNNGG	2 cut(s)	200, 1091
AflIII	ACRYGT	1 cut(s)	983
AgsI	TTSAA	8 cut(s)	295, 397, 722, 919, 930, 967, 1157, 1251
AjnI	CCWGG	2 cut(s)	697, 763
AluBI	AGCT	8 cut(s)	64, 247, 415, 445, 529, 541, 608, 1286
AluI	AGCT	8 cut(s)	64, 247, 415, 445, 529, 541, 608, 1286
Alw21I	GWGCWC	1 cut(s)	337
Alw26I	GTCTC	3 cut(s)	377, 456, 1329
AlwI	GGATC	2 cut(s)	641, 654
AlwNI	CAGNNNCTG	1 cut(s)	656
Ama87I	CYCGRG	1 cut(s)	364
AoxI	GGCC	3 cut(s)	457, 1001, 1169
ApeKI	GCWGC	2 cut(s)	656, 791
ApoI	RAATTY	3 cut(s)	297, 1049, 1252
Asp700I	GAANNNNTTC	2 cut(s)	509, 528
Asp718I	GGTACC	1 cut(s)	1027
AspA2I	CCTAGG	1 cut(s)	736
AspLEI	GCGC	3 cut(s)	7, 555, 667
AspS9I	GGNCC	2 cut(s)	713, 1001
AsuC2I	CCSGG	4 cut(s)	201, 365, 366, 380
AsuHPI	GGTGA	2 cut(s)	31, 764
AvaI	CYCGRG	1 cut(s)	364
AvaII	GGWCC	1 cut(s)	713
AvrII	CCTAGG	1 cut(s)	736
BalI	TGGCCA	1 cut(s)	459
BamHI	GGATCC	1 cut(s)	646
BanI	GGYRCC	3 cut(s)	4, 176, 1027
BanII	GRGCYC	2 cut(s)	156, 357
BbsI	GAAGAC	2 cut(s)	816, 1004
Bbv12I	GWGCWC	1 cut(s)	337
BbvI	GCAGC	2 cut(s)	643, 803
BccI	CCATC	2 cut(s)	628, 1197
BceAI	ACGGC	1 cut(s)	293
BciT130I	CCWGG	2 cut(s)	699, 765
BcnI	CCSGG	4 cut(s)	201, 365, 366, 380
BcoDI	GTCTC	3 cut(s)	377, 456, 1329
BfaI	CTAG	1 cut(s)	737
BfmI	CTRYAG	1 cut(s)	1266
BfoI	RGCGCY	1 cut(s)	8
BisI	GCNGC	8 cut(s)	186, 189, 226, 240, 275, 657, 792, 1185
BlnI	CCTAGG	1 cut(s)	736
BlpI	GCTNAGC	1 cut(s)	243
BlsI	GCNGC	8 cut(s)	187, 190, 227, 241, 276, 658, 793, 1186
Bme1390I	CCNGG	6 cut(s)	201, 365, 366, 380, 699, 765
Bme18I	GGWCC	1 cut(s)	713
BmeT110I	CYCGRG	1 cut(s)	364
BmgT120I	GGNCC	2 cut(s)	713, 1001
BmiI	GGNNCC	7 cut(s)	6, 153, 178, 184, 648, 714, 1029
BmrFI	CCNGG	6 cut(s)	201, 365, 366, 380, 699, 765
BmrI	ACTGGG	4 cut(s)	151, 590, 1101, 1328
BmsI	GCATC	3 cut(s)	668, 1171, 1221
BmuI	ACTGGG	4 cut(s)	151, 590, 1101, 1328
BpiI	GAAGAC	2 cut(s)	816, 1004
BplI	GAGNNNNNCTC	4 cut(s)	527, 559, 759, 791
BpmI	CTGGAG	2 cut(s)	786, 1368
Bpu10I	CCTNAGC	1 cut(s)	1198
Bpu1102I	GCTNAGC	1 cut(s)	243
BpuEI	CTTGAG	1 cut(s)	239
BpuMI	CCSGG	4 cut(s)	201, 365, 366, 380
BsaBI	GATNNNNATC	1 cut(s)	1211
BsaHI	GRCGYC	2 cut(s)	5, 360
BsaI	GGTCTC	2 cut(s)	377, 1329
BsaJI	CCNNGG	5 cut(s)	199, 363, 364, 708, 736
BsaWI	WCCGGW	1 cut(s)	179
BsaXI	ACNNNNNCTCC	4 cut(s)	143, 173, 933, 963
Bsc4I	CCNNNNNNNGG	2 cut(s)	200, 1091
Bse1I	ACTGG	6 cut(s)	157, 585, 650, 1096, 1304, 1334
Bse8I	GATNNNNATC	1 cut(s)	1211
BseBI	CCWGG	2 cut(s)	699, 765
BseDI	CCNNGG	5 cut(s)	199, 363, 364, 708, 736
BseGI	GGATG	3 cut(s)	105, 1051, 1208
BseJI	GATNNNNATC	1 cut(s)	1211
BseLI	CCNNNNNNNGG	2 cut(s)	200, 1091
BseMII	CTCAG	3 cut(s)	137, 881, 1145
BseNI	ACTGG	6 cut(s)	157, 585, 650, 1096, 1304, 1334
BseRI	GAGGAG	4 cut(s)	10, 56, 756, 819
BseXI	GCAGC	2 cut(s)	643, 803
Bsh1236I	CGCG	1 cut(s)	239
Bsh1285I	CGRYCG	1 cut(s)	208
BshFI	GGCC	3 cut(s)	459, 1003, 1171
BshNI	GGYRCC	3 cut(s)	4, 176, 1027
BsiEI	CGRYCG	1 cut(s)	208
BsiHKAI	GWGCWC	1 cut(s)	337
BsiHKCI	CYCGRG	1 cut(s)	364
BsiSI	CCGG	4 cut(s)	180, 201, 365, 380
BslFI	GGGAC	2 cut(s)	18, 1280
BslI	CCNNNNNNNGG	2 cut(s)	200, 1091
BsmAI	GTCTC	3 cut(s)	377, 456, 1329
BsmFI	GGGAC	2 cut(s)	18, 1280
BsnI	GGCC	3 cut(s)	459, 1003, 1171
Bso31I	GGTCTC	2 cut(s)	377, 1329
BsoBI	CYCGRG	1 cut(s)	364
Bsp1286I	GDGCHC	3 cut(s)	156, 337, 357
Bsp143I	GATC	1 cut(s)	646
Bsp1720I	GCTNAGC	1 cut(s)	243
BspANI	GGCC	3 cut(s)	459, 1003, 1171
BspCNI	CTCAG	3 cut(s)	136, 880, 1144
BspFNI	CGCG	1 cut(s)	239
BspLI	GGNNCC	7 cut(s)	6, 153, 178, 184, 648, 714, 1029
BspMAI	CTGCAG	1 cut(s)	1270
BspPI	GGATC	2 cut(s)	641, 654
BspT107I	GGYRCC	3 cut(s)	4, 176, 1027
BspTNI	GGTCTC	2 cut(s)	377, 1329
BsrBI	CCGCTC	1 cut(s)	228
BsrI	ACTGG	6 cut(s)	157, 585, 650, 1096, 1304, 1334
BssECI	CCNNGG	5 cut(s)	199, 363, 364, 708, 736
BssMI	GATC	1 cut(s)	646
BssNI	GRCGYC	2 cut(s)	5, 360
BssT1I	CCWWGG	2 cut(s)	708, 736
Bst2UI	CCWGG	2 cut(s)	699, 765
Bst4CI	ACNGT	2 cut(s)	326, 424
Bst6I	CTCTTC	1 cut(s)	1383
BstACI	GRCGYC	2 cut(s)	5, 360
BstAPI	GCANNNNNTGC	1 cut(s)	1181
BstC8I	GCNNGC	4 cut(s)	316, 443, 789, 1173
BstDEI	CTNAG	7 cut(s)	123, 243, 416, 842, 867, 1131, 1198
BstF5I	GGATG	3 cut(s)	105, 1051, 1208
BstFNI	CGCG	1 cut(s)	239
BstH2I	RGCGCY	1 cut(s)	8
BstHHI	GCGC	3 cut(s)	7, 555, 667
BstKTI	GATC	1 cut(s)	649
BstMAI	GTCTC	3 cut(s)	377, 456, 1329
BstMBI	GATC	1 cut(s)	646
BstMCI	CGRYCG	1 cut(s)	208
BstMWI	GCNNNNNNNGC	4 cut(s)	412, 662, 1141, 1181
BstNI	CCWGG	2 cut(s)	699, 765
BstNSI	RCATGY	2 cut(s)	1179, 1295
BstSCI	CCNGG	6 cut(s)	199, 363, 364, 378, 697, 763
BstSFI	CTRYAG	1 cut(s)	1266
BstUI	CGCG	1 cut(s)	239
BstV1I	GCAGC	2 cut(s)	643, 803
BstV2I	GAAGAC	2 cut(s)	816, 1004
BstX2I	RGATCY	1 cut(s)	646
BstYI	RGATCY	1 cut(s)	646
BsuRI	GGCC	3 cut(s)	459, 1003, 1171
BtsCI	GGATG	3 cut(s)	105, 1051, 1208
BtsI	GCAGTG	1 cut(s)	801
BtsIMutI	CAGTG	4 cut(s)	622, 801, 1032, 1341
Cac8I	GCNNGC	4 cut(s)	316, 443, 789, 1173
CaiI	CAGNNNCTG	1 cut(s)	656
CfoI	GCGC	3 cut(s)	7, 555, 667
Cfr13I	GGNCC	2 cut(s)	713, 1001
Cfr9I	CCCGGG	1 cut(s)	364
CseI	GACGC	3 cut(s)	245, 368, 1124
Csp6I	GTAC	2 cut(s)	673, 1028
CspCI	CAANNNNNGTGG	2 cut(s)	1317, 1352
CviAII	CATG	6 cut(s)	455, 463, 517, 894, 1176, 1292
CviQI	GTAC	2 cut(s)	673, 1028
DdeI	CTNAG	7 cut(s)	123, 243, 416, 842, 867, 1131, 1198
DinI	GGCGCC	1 cut(s)	6
DpnI	GATC	1 cut(s)	648
DpnII	GATC	1 cut(s)	646
DrdI	GACNNNNNNGTC	1 cut(s)	846
DseDI	GACNNNNNNGTC	1 cut(s)	846
EaeI	YGGCCR	1 cut(s)	457
Eam1104I	CTCTTC	1 cut(s)	1383
EarI	CTCTTC	1 cut(s)	1383
EciI	GGCGGA	3 cut(s)	212, 653, 1058
Eco130I	CCWWGG	2 cut(s)	708, 736
Eco147I	AGGCCT	1 cut(s)	1171
Eco24I	GRGCYC	2 cut(s)	156, 357
Eco31I	GGTCTC	2 cut(s)	377, 1329
Eco47I	GGWCC	1 cut(s)	713
Eco57I	CTGAAG	1 cut(s)	998
Eco88I	CYCGRG	1 cut(s)	364
EcoRII	CCWGG	2 cut(s)	697, 763
EcoT14I	CCWWGG	2 cut(s)	708, 736
EcoT22I	ATGCAT	1 cut(s)	394
EcoT38I	GRGCYC	2 cut(s)	156, 357
EgeI	GGCGCC	1 cut(s)	6
EheI	GGCGCC	1 cut(s)	6
ErhI	CCWWGG	2 cut(s)	708, 736
FaeI	CATG	6 cut(s)	458, 466, 520, 897, 1179, 1295
FaqI	GGGAC	2 cut(s)	18, 1280
FatI	CATG	6 cut(s)	454, 462, 516, 893, 1175, 1291
FauI	CCCGC	1 cut(s)	494
FauNDI	CATATG	1 cut(s)	1023
FblI	GTMKAC	1 cut(s)	838
Fnu4HI	GCNGC	8 cut(s)	186, 189, 226, 240, 275, 657, 792, 1185
FokI	GGATG	3 cut(s)	92, 1058, 1215
FriOI	GRGCYC	2 cut(s)	156, 357
Fsp4HI	GCNGC	8 cut(s)	186, 189, 226, 240, 275, 657, 792, 1185
FspBI	CTAG	1 cut(s)	737
GlaI	GCGC	3 cut(s)	6, 554, 666
GluI	GCNGC	8 cut(s)	186, 189, 226, 240, 275, 657, 792, 1185
GsuI	CTGGAG	2 cut(s)	786, 1368
HaeII	RGCGCY	1 cut(s)	8
HaeIII	GGCC	3 cut(s)	459, 1003, 1171
HapII	CCGG	4 cut(s)	180, 201, 365, 380
HgaI	GACGC	3 cut(s)	245, 368, 1124
HhaI	GCGC	3 cut(s)	7, 555, 667
Hin1I	GRCGYC	2 cut(s)	5, 360
Hin1II	CATG	6 cut(s)	458, 466, 520, 897, 1179, 1295
Hin6I	GCGC	3 cut(s)	5, 553, 665
HinP1I	GCGC	3 cut(s)	5, 553, 665
HincII	GTYRAC	2 cut(s)	839, 1377
HindII	GTYRAC	2 cut(s)	839, 1377
HindIII	AAGCTT	1 cut(s)	443
HinfI	GANTC	6 cut(s)	117, 1009, 1018, 1122, 1127, 1247
HpaII	CCGG	4 cut(s)	180, 201, 365, 380
HphI	GGTGA	2 cut(s)	31, 764
Hpy166II	GTNNAC	3 cut(s)	772, 839, 1377
Hpy188I	TCNGA	8 cut(s)	151, 352, 376, 808, 953, 1017, 1246, 1258
Hpy188III	TCNNGA	5 cut(s)	533, 879, 964, 1347, 1370
Hpy8I	GTNNAC	3 cut(s)	772, 839, 1377
Hpy99I	CGWCG	3 cut(s)	239, 314, 362
HpyAV	CCTTC	9 cut(s)	34, 46, 52, 167, 241, 429, 828, 892, 961
HpyCH4III	ACNGT	2 cut(s)	326, 424
HpyCH4IV	ACGT	1 cut(s)	985
HpyF10VI	GCNNNNNNNGC	4 cut(s)	412, 662, 1141, 1181
HpyF3I	CTNAG	7 cut(s)	123, 243, 416, 842, 867, 1131, 1198
HpySE526I	ACGT	1 cut(s)	985
Hsp92I	GRCGYC	2 cut(s)	5, 360
Hsp92II	CATG	6 cut(s)	458, 466, 520, 897, 1179, 1295
HspAI	GCGC	3 cut(s)	5, 553, 665
KasI	GGCGCC	1 cut(s)	4
KpnI	GGTACC	1 cut(s)	1031
Kzo9I	GATC	1 cut(s)	646
LmnI	GCTCC	7 cut(s)	69, 151, 182, 233, 340, 832, 1349
Lsp1109I	GCAGC	2 cut(s)	643, 803
LweI	GCATC	3 cut(s)	668, 1171, 1221
MaeI	CTAG	1 cut(s)	737
MaeII	ACGT	1 cut(s)	985
MaeIII	GTNAC	3 cut(s)	159, 320, 339
MalI	GATC	1 cut(s)	648
MbiI	CCGCTC	1 cut(s)	228
MboI	GATC	1 cut(s)	646
MboII	GAAGA	9 cut(s)	277, 280, 409, 412, 821, 1004, 1169, 1400, 1406
MfeI	CAATTG	1 cut(s)	1139
MflI	RGATCY	1 cut(s)	646
MhlI	GDGCHC	3 cut(s)	156, 337, 357
MlsI	TGGCCA	1 cut(s)	459
MluCI	AATT	8 cut(s)	297, 717, 749, 862, 904, 1049, 1139, 1252
MluNI	TGGCCA	1 cut(s)	459
Mly113I	GGCGCC	1 cut(s)	5
MlyI	GAGTC	3 cut(s)	1018, 1116, 1121
MmeI	TCCRAC	3 cut(s)	399, 1048, 1112
Mox20I	TGGCCA	1 cut(s)	459
Mph1103I	ATGCAT	1 cut(s)	394
MroXI	GAANNNNTTC	2 cut(s)	509, 528
MscI	TGGCCA	1 cut(s)	459
MseI	TTAA	2 cut(s)	576, 989
Msp20I	TGGCCA	1 cut(s)	459
MspI	CCGG	4 cut(s)	180, 201, 365, 380
MspR9I	CCNGG	6 cut(s)	201, 365, 366, 380, 699, 765
MunI	CAATTG	1 cut(s)	1139
MvaI	CCWGG	2 cut(s)	699, 765
MvnI	CGCG	1 cut(s)	239
MwoI	GCNNNNNNNGC	4 cut(s)	412, 662, 1141, 1181
NarI	GGCGCC	1 cut(s)	5
NciI	CCSGG	4 cut(s)	201, 365, 366, 380
NdeI	CATATG	1 cut(s)	1023
NdeII	GATC	1 cut(s)	646
NlaIII	CATG	6 cut(s)	458, 466, 520, 897, 1179, 1295
NlaIV	GGNNCC	7 cut(s)	6, 153, 178, 184, 648, 714, 1029
NsiI	ATGCAT	1 cut(s)	394
NspI	RCATGY	2 cut(s)	1179, 1295
PceI	AGGCCT	1 cut(s)	1171
PdmI	GAANNNNTTC	2 cut(s)	509, 528
PfeI	GAWTC	3 cut(s)	117, 1018, 1247
PfoI	TCCNGGA	1 cut(s)	697
PkrI	GCNGC	8 cut(s)	187, 190, 227, 241, 276, 658, 793, 1186
PleI	GAGTC	3 cut(s)	1017, 1116, 1121
PluTI	GGCGCC	1 cut(s)	8
PpsI	GAGTC	3 cut(s)	1017, 1116, 1121
Psp6I	CCWGG	2 cut(s)	697, 763
PspGI	CCWGG	2 cut(s)	697, 763
PspN4I	GGNNCC	7 cut(s)	6, 153, 178, 184, 648, 714, 1029
PspPI	GGNCC	2 cut(s)	713, 1001
PstI	CTGCAG	1 cut(s)	1270
PstNI	CAGNNNCTG	1 cut(s)	656
PsuI	RGATCY	1 cut(s)	646
RsaI	GTAC	2 cut(s)	674, 1029
RsaNI	GTAC	2 cut(s)	673, 1028
SalI	GTCGAC	1 cut(s)	837
SaqAI	TTAA	2 cut(s)	576, 989
SatI	GCNGC	8 cut(s)	186, 189, 226, 240, 275, 657, 792, 1185
Sau3AI	GATC	1 cut(s)	646
Sau96I	GGNCC	2 cut(s)	713, 1001
SchI	GAGTC	3 cut(s)	1018, 1116, 1121
ScrFI	CCNGG	6 cut(s)	201, 365, 366, 380, 699, 765
SduI	GDGCHC	3 cut(s)	156, 337, 357
SfaNI	GCATC	3 cut(s)	668, 1171, 1221
SfcI	CTRYAG	1 cut(s)	1266
SfoI	GGCGCC	1 cut(s)	6
SinI	GGWCC	1 cut(s)	713
SmaI	CCCGGG	1 cut(s)	366
SmlI	CTYRAG	1 cut(s)	254
SmoI	CTYRAG	1 cut(s)	254
Sse9I	AATT	8 cut(s)	297, 717, 749, 862, 904, 1049, 1139, 1252
SseBI	AGGCCT	1 cut(s)	1171
SspDI	GGCGCC	1 cut(s)	4
SspI	AATATT	2 cut(s)	933, 1314
SspMI	CTAG	1 cut(s)	737
StuI	AGGCCT	1 cut(s)	1171
StyD4I	CCNGG	6 cut(s)	199, 363, 364, 378, 697, 763
StyI	CCWWGG	2 cut(s)	708, 736
TaaI	ACNGT	2 cut(s)	326, 424
TaiI	ACGT	1 cut(s)	988
TaqI	TCGA	6 cut(s)	216, 234, 838, 1125, 1215, 1308
TaqII	GACCGA	1 cut(s)	1394
TasI	AATT	8 cut(s)	297, 717, 749, 862, 904, 1049, 1139, 1252
TatI	WGTACW	1 cut(s)	672
TauI	GCSGC	6 cut(s)	188, 191, 228, 242, 277, 1187
TfiI	GAWTC	3 cut(s)	117, 1018, 1247
Tru1I	TTAA	2 cut(s)	576, 989
Tru9I	TTAA	2 cut(s)	576, 989
TscAI	CASTG	4 cut(s)	622, 801, 1039, 1341
TseI	GCWGC	2 cut(s)	656, 791
TspDTI	ATGAA	6 cut(s)	502, 601, 791, 1010, 1062, 1125
TspGWI	ACGGA	1 cut(s)	327
TspMI	CCCGGG	1 cut(s)	364
TspRI	CASTG	4 cut(s)	622, 801, 1039, 1341
VpaK11BI	GGWCC	1 cut(s)	713
XapI	RAATTY	3 cut(s)	297, 1049, 1252
XceI	RCATGY	2 cut(s)	1179, 1295
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1064
XmaI	CCCGGG	1 cut(s)	364
XmaJI	CCTAGG	1 cut(s)	736
XmiI	GTMKAC	1 cut(s)	838
XmnI	GAANNNNTTC	2 cut(s)	509, 528
XspI	CTAG	1 cut(s)	737
Zsp2I	ATGCAT	1 cut(s)	394

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.