Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1C

Orthogroup ID

OG0007878

Physical Location & Seq

Genomic Coordinates Reverse (-)

63992029 .. 63996146

Gene Structure 4118 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1CG369400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1167 bp

ATGGCGCCTAAAACCCTCTCCTCCTTCCTCTCTCCCTTCACCTTCACACTCCCCAACCCCAAGCTCCTCAACCTCAACCTCCACCCCAACCCCACTCTCATCCTCTGCCGATTCTCTCAGCCCCACCAGAAACCACCCCTCTCGGAGCCCCAGTTACCCCAACCCGAAGGCACCGGAGCCGCTGCACCCACCCCCGGCGACCGTTTCCTCGAAAGCCGCTGCTCCTTCGACGCGGCTAAGATCTTGCTCAAGGAAAAGAAGAAGAAGCGGCTCAAAGAGAAGCCCTTGAAGCTCTCCACCGCCGTCGCTTGCTGTTACGGTTGCGGAGCTCCGTTACAGACTTCCGAGCCCGACGCCCCGGGTTATTCCGACCCGGAGACCTATGCATTGAAGAAGAAGCACCACCAGCTTAGAACTGTTATATGTGGAAGGTGCAAGCTTCTGTCGCATGGCCACATGATAACTGCTGTCGGTGGGAATGGTGGTTATGCTGGCGGGAAGCAGTTCATCATGGCGGAACAGCTTCGGGAGAAGCTCTCACATTTGCGATACGAGAGAGCGTTGATAGTTAAATTGGGATCGGCAAATGTTGGGAAATCAGCTTTCATCAGTGCTTTACTGAAACTGATGGCGGAAAAGGATCCAGTTGCTGCATCAGCGCAGAAGTACAAACCAATACAATCTGCTGTTCCTGGAACTACCTTGGGTCCAATTCAAATAAATGCTTTCCTAGGAGGAGGGAAATTATATGATACACCTGGAGTTCACCTCCACCATAGGCAAGCAGCAGTGGTTCATTCAGAAGACCTACCTTCCCTTGCTCCTCAAAGTCGGCTTAGGGGTCAATCTTTGCCTAATTCTCAGGTTTCCTCTGGAAATATAACAACATGGAAAGGCAATTCTAATGATTTGAATGGCTATTCAATATTCTGGGGAGGTCTTGTCAGAGTAGATGTCTTGAAGGTTCTCCCTGAAACACGTTTAACATTTTATGGGCCAAAGAGTCTTCAGATTCATATGGTACCCACTGATGAGGCGGATGAATTTTACCAGAAACAAGTTGGAGTTTTATTGACACCTCCAACTGGGAAAGAAAGGGCAGATGAATGGAGAGGACTCGACTCTCAGCGTCAATTGCAGATAAAAGTTGAAGATGTGCAAAGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0001101 GO:0001505 GO:0003674 GO:0003824 GO:0003924 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006109 GO:0006807 GO:0006809 GO:0006950 GO:0006970 GO:0006979 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009507 GO:0009536 GO:0009628 GO:0009651 GO:0009657 GO:0009668 GO:0009889 GO:0009987 GO:0010027 GO:0010035 GO:0010193 GO:0010322 GO:0010565 GO:0010675 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017111 GO:0017144 GO:0019216 GO:0019220 GO:0019222 GO:0019747 GO:0022613 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0034641 GO:0042133 GO:0042136 GO:0042221 GO:0042254 GO:0042493 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044085 GO:0044237 GO:0044249 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0046209 GO:0046677 GO:0046890 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051174 GO:0051246 GO:0060255 GO:0061024 GO:0062012 GO:0065007 GO:0065008 GO:0071071 GO:0071840 GO:0072593 GO:0080090 GO:0099402 GO:1901700 GO:1903409 GO:1903725 GO:2001057

KEGG Pathways

Metabolic & Signaling

ko00220 ko00330 ko01100 ko01110 ko01130 ko04626 map00220 map00330 map01100 map01110 map01130 map04626

Pfam Domains

Protein Families

MMR_HSR1

Protein Analysis

388

Amino Acids

42.46

Weight (kDa)

9.54

Isoelectric Point (pI)

38.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MMR_HSR1	PF01926	192 - 259	6.1e-06	50S ribosome-binding GTPase
YqeH-like_C	PF21516	327 - 370	6.4e-06	YqeH-like, C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007878)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G47450 AT3G47450
fragaria_vesca	FvH4_7g25681 FvH4_7g27380 FvH4_7g27380 FvH4_7g28391
malus_domestica	MD07G1252900.v1.1
prunus_persica	Prupe.2G276500_v2.0.a1
pyrus_communis	pycom07g22550
rosa_chinensis	RchiOBHm_Chr1g0374211
rosa_laevigata	RLG00000026755
rosa_multiflora	Rmu_co8240197.1_g000001 Rmu_ssc0000007.1_g000041 Rmu_ssc0000450.1_g000005
rosa_roxburghii	Rroxscaffold_3G00227680 Rroxscaffold_4G00283640 Rroxscaffold_7G00194520
rosa_rugosa	Rorug01G0381400 Rorug01G0381500
rosa_samantha	Rh1AG392400 Rh1BG356400 Rh1CG369400 Rh1DG386900
rosa_wichuraiana	Rw1G034330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1021
AccB1I	GGYRCC	3 cut(s)	4, 170, 1021
AccII	CGCG	1 cut(s)	233
AclWI	GGATC	3 cut(s)	586, 635, 648
AcoI	YGGCCR	1 cut(s)	451
AcsI	RAATTY	1 cut(s)	1043
AcuI	CTGAAG	1 cut(s)	992
AcyI	GRCGYC	2 cut(s)	5, 354
AfaI	GTAC	2 cut(s)	668, 1023
AfiI	CCNNNNNNNGG	2 cut(s)	194, 1085
AflIII	ACRYGT	1 cut(s)	977
AgsI	TTSAA	7 cut(s)	289, 391, 716, 913, 924, 961, 1151
AjnI	CCWGG	2 cut(s)	691, 757
AluBI	AGCT	8 cut(s)	64, 292, 329, 409, 439, 523, 535, 602
AluI	AGCT	8 cut(s)	64, 292, 329, 409, 439, 523, 535, 602
Alw21I	GWGCWC	1 cut(s)	331
Alw26I	GTCTC	1 cut(s)	371
AlwI	GGATC	3 cut(s)	586, 635, 648
AlwNI	CAGNNNCTG	1 cut(s)	650
Ama87I	CYCGRG	1 cut(s)	358
AoxI	GGCC	2 cut(s)	451, 995
ApeKI	GCWGC	4 cut(s)	182, 219, 650, 785
ApoI	RAATTY	1 cut(s)	1043
Asp700I	GAANNNNTTC	2 cut(s)	503, 522
Asp718I	GGTACC	1 cut(s)	1021
AspA2I	CCTAGG	1 cut(s)	730
AspLEI	GCGC	2 cut(s)	7, 661
AspS9I	GGNCC	2 cut(s)	707, 995
AsuC2I	CCSGG	4 cut(s)	195, 359, 360, 374
AsuHPI	GGTGA	2 cut(s)	31, 758
AvaI	CYCGRG	1 cut(s)	358
AvaII	GGWCC	1 cut(s)	707
AvrII	CCTAGG	1 cut(s)	730
BalI	TGGCCA	1 cut(s)	453
BamHI	GGATCC	1 cut(s)	640
BanI	GGYRCC	3 cut(s)	4, 170, 1021
BanII	GRGCYC	3 cut(s)	150, 331, 351
BbsI	GAAGAC	2 cut(s)	810, 998
Bbv12I	GWGCWC	1 cut(s)	331
BbvI	GCAGC	4 cut(s)	169, 206, 637, 797
BccI	CCATC	1 cut(s)	622
BceAI	ACGGC	1 cut(s)	287
BciT130I	CCWGG	2 cut(s)	693, 759
BcnI	CCSGG	4 cut(s)	195, 359, 360, 374
BcoDI	GTCTC	1 cut(s)	371
BfaI	CTAG	1 cut(s)	731
BfoI	RGCGCY	1 cut(s)	8
BglII	AGATCT	1 cut(s)	240
BisI	GCNGC	8 cut(s)	180, 183, 217, 220, 234, 269, 651, 786
BlnI	CCTAGG	1 cut(s)	730
BlsI	GCNGC	8 cut(s)	181, 184, 218, 221, 235, 270, 652, 787
Bme1390I	CCNGG	6 cut(s)	195, 359, 360, 374, 693, 759
Bme18I	GGWCC	1 cut(s)	707
BmeT110I	CYCGRG	1 cut(s)	358
BmgT120I	GGNCC	2 cut(s)	707, 995
BmiI	GGNNCC	7 cut(s)	6, 147, 172, 178, 642, 708, 1023
BmrFI	CCNGG	6 cut(s)	195, 359, 360, 374, 693, 759
BmrI	ACTGGG	2 cut(s)	145, 1095
BmsI	GCATC	1 cut(s)	662
BmuI	ACTGGG	2 cut(s)	145, 1095
BpiI	GAAGAC	2 cut(s)	810, 998
BplI	GAGNNNNNCTC	4 cut(s)	521, 553, 753, 785
BpmI	CTGGAG	1 cut(s)	780
Bpu10I	CCTNAGC	1 cut(s)	836
BpuEI	CTTGAG	1 cut(s)	233
BpuMI	CCSGG	4 cut(s)	195, 359, 360, 374
BsaHI	GRCGYC	2 cut(s)	5, 354
BsaI	GGTCTC	1 cut(s)	371
BsaJI	CCNNGG	5 cut(s)	193, 357, 358, 702, 730
BsaWI	WCCGGW	1 cut(s)	173
BsaXI	ACNNNNNCTCC	4 cut(s)	137, 167, 927, 957
Bsc4I	CCNNNNNNNGG	2 cut(s)	194, 1085
Bse1I	ACTGG	3 cut(s)	151, 644, 1090
BseBI	CCWGG	2 cut(s)	693, 759
BseDI	CCNNGG	5 cut(s)	193, 357, 358, 702, 730
BseGI	GGATG	2 cut(s)	99, 1045
BseLI	CCNNNNNNNGG	2 cut(s)	194, 1085
BseMII	CTCAG	3 cut(s)	131, 875, 1139
BseNI	ACTGG	3 cut(s)	151, 644, 1090
BseRI	GAGGAG	4 cut(s)	10, 56, 750, 813
BseXI	GCAGC	4 cut(s)	169, 206, 637, 797
BsgI	GTGCAG	1 cut(s)	168
Bsh1236I	CGCG	1 cut(s)	233
Bsh1285I	CGRYCG	1 cut(s)	202
BshFI	GGCC	2 cut(s)	453, 997
BshNI	GGYRCC	3 cut(s)	4, 170, 1021
BsiEI	CGRYCG	1 cut(s)	202
BsiHKAI	GWGCWC	1 cut(s)	331
BsiHKCI	CYCGRG	1 cut(s)	358
BsiSI	CCGG	4 cut(s)	174, 195, 359, 374
BslI	CCNNNNNNNGG	2 cut(s)	194, 1085
BsmAI	GTCTC	1 cut(s)	371
BsnI	GGCC	2 cut(s)	453, 997
Bso31I	GGTCTC	1 cut(s)	371
BsoBI	CYCGRG	1 cut(s)	358
Bsp1286I	GDGCHC	3 cut(s)	150, 331, 351
Bsp143I	GATC	3 cut(s)	240, 578, 640
BspANI	GGCC	2 cut(s)	453, 997
BspCNI	CTCAG	3 cut(s)	130, 874, 1138
BspFNI	CGCG	1 cut(s)	233
BspLI	GGNNCC	7 cut(s)	6, 147, 172, 178, 642, 708, 1023
BspPI	GGATC	3 cut(s)	586, 635, 648
BspT107I	GGYRCC	3 cut(s)	4, 170, 1021
BspTNI	GGTCTC	1 cut(s)	371
BsrI	ACTGG	3 cut(s)	151, 644, 1090
BssECI	CCNNGG	5 cut(s)	193, 357, 358, 702, 730
BssMI	GATC	3 cut(s)	240, 578, 640
BssNI	GRCGYC	2 cut(s)	5, 354
BssT1I	CCWWGG	2 cut(s)	702, 730
Bst2UI	CCWGG	2 cut(s)	693, 759
Bst4CI	ACNGT	3 cut(s)	203, 320, 418
BstACI	GRCGYC	2 cut(s)	5, 354
BstC8I	GCNNGC	4 cut(s)	310, 437, 493, 783
BstDEI	CTNAG	6 cut(s)	117, 237, 410, 836, 861, 1125
BstF5I	GGATG	2 cut(s)	99, 1045
BstFNI	CGCG	1 cut(s)	233
BstH2I	RGCGCY	1 cut(s)	8
BstHHI	GCGC	2 cut(s)	7, 661
BstKTI	GATC	3 cut(s)	243, 581, 643
BstMAI	GTCTC	1 cut(s)	371
BstMBI	GATC	3 cut(s)	240, 578, 640
BstMCI	CGRYCG	1 cut(s)	202
BstMWI	GCNNNNNNNGC	5 cut(s)	289, 406, 445, 656, 1135
BstNI	CCWGG	2 cut(s)	693, 759
BstSCI	CCNGG	6 cut(s)	193, 357, 358, 372, 691, 757
BstUI	CGCG	1 cut(s)	233
BstV1I	GCAGC	4 cut(s)	169, 206, 637, 797
BstV2I	GAAGAC	2 cut(s)	810, 998
BstX2I	RGATCY	2 cut(s)	240, 640
BstYI	RGATCY	2 cut(s)	240, 640
BsuRI	GGCC	2 cut(s)	453, 997
BtsCI	GGATG	2 cut(s)	99, 1045
BtsI	GCAGTG	1 cut(s)	795
BtsIMutI	CAGTG	3 cut(s)	616, 795, 1026
Cac8I	GCNNGC	4 cut(s)	310, 437, 493, 783
CaiI	CAGNNNCTG	1 cut(s)	650
CfoI	GCGC	2 cut(s)	7, 661
Cfr13I	GGNCC	2 cut(s)	707, 995
Cfr9I	CCCGGG	1 cut(s)	358
CseI	GACGC	3 cut(s)	239, 362, 1118
Csp6I	GTAC	2 cut(s)	667, 1022
CviAII	CATG	4 cut(s)	449, 457, 511, 888
CviQI	GTAC	2 cut(s)	667, 1022
DdeI	CTNAG	6 cut(s)	117, 237, 410, 836, 861, 1125
DinI	GGCGCC	1 cut(s)	6
DpnI	GATC	3 cut(s)	242, 580, 642
DpnII	GATC	3 cut(s)	240, 578, 640
EaeI	YGGCCR	1 cut(s)	451
EciI	GGCGGA	3 cut(s)	530, 647, 1052
Ecl136II	GAGCTC	1 cut(s)	329
Eco130I	CCWWGG	2 cut(s)	702, 730
Eco24I	GRGCYC	3 cut(s)	150, 331, 351
Eco31I	GGTCTC	1 cut(s)	371
Eco47I	GGWCC	1 cut(s)	707
Eco53kI	GAGCTC	1 cut(s)	329
Eco57I	CTGAAG	1 cut(s)	992
Eco88I	CYCGRG	1 cut(s)	358
EcoICRI	GAGCTC	1 cut(s)	329
EcoRII	CCWGG	2 cut(s)	691, 757
EcoT14I	CCWWGG	2 cut(s)	702, 730
EcoT22I	ATGCAT	1 cut(s)	388
EcoT38I	GRGCYC	3 cut(s)	150, 331, 351
EgeI	GGCGCC	1 cut(s)	6
EheI	GGCGCC	1 cut(s)	6
ErhI	CCWWGG	2 cut(s)	702, 730
FaeI	CATG	4 cut(s)	452, 460, 514, 891
FatI	CATG	4 cut(s)	448, 456, 510, 887
FauI	CCCGC	1 cut(s)	488
FauNDI	CATATG	1 cut(s)	1017
Fnu4HI	GCNGC	8 cut(s)	180, 183, 217, 220, 234, 269, 651, 786
FokI	GGATG	2 cut(s)	86, 1052
FriOI	GRGCYC	3 cut(s)	150, 331, 351
Fsp4HI	GCNGC	8 cut(s)	180, 183, 217, 220, 234, 269, 651, 786
FspBI	CTAG	1 cut(s)	731
GlaI	GCGC	2 cut(s)	6, 660
GluI	GCNGC	8 cut(s)	180, 183, 217, 220, 234, 269, 651, 786
GsuI	CTGGAG	1 cut(s)	780
HaeII	RGCGCY	1 cut(s)	8
HaeIII	GGCC	2 cut(s)	453, 997
HapII	CCGG	4 cut(s)	174, 195, 359, 374
HgaI	GACGC	3 cut(s)	239, 362, 1118
HhaI	GCGC	2 cut(s)	7, 661
Hin1I	GRCGYC	2 cut(s)	5, 354
Hin1II	CATG	4 cut(s)	452, 460, 514, 891
Hin6I	GCGC	2 cut(s)	5, 659
HinP1I	GCGC	2 cut(s)	5, 659
HindIII	AAGCTT	1 cut(s)	437
HinfI	GANTC	5 cut(s)	111, 1003, 1012, 1116, 1121
HpaII	CCGG	4 cut(s)	174, 195, 359, 374
HphI	GGTGA	2 cut(s)	31, 758
Hpy166II	GTNNAC	1 cut(s)	766
Hpy188I	TCNGA	6 cut(s)	145, 346, 370, 802, 947, 1011
Hpy188III	TCNNGA	3 cut(s)	527, 873, 958
Hpy8I	GTNNAC	1 cut(s)	766
Hpy99I	CGWCG	3 cut(s)	233, 308, 356
HpyAV	CCTTC	8 cut(s)	34, 46, 52, 161, 235, 423, 822, 955
HpyCH4III	ACNGT	3 cut(s)	203, 320, 418
HpyCH4IV	ACGT	1 cut(s)	979
HpyCH4V	TGCA	6 cut(s)	185, 386, 435, 653, 1138, 1159
HpyF10VI	GCNNNNNNNGC	5 cut(s)	289, 406, 445, 656, 1135
HpyF3I	CTNAG	6 cut(s)	117, 237, 410, 836, 861, 1125
HpySE526I	ACGT	1 cut(s)	979
Hsp92I	GRCGYC	2 cut(s)	5, 354
Hsp92II	CATG	4 cut(s)	452, 460, 514, 891
HspAI	GCGC	2 cut(s)	5, 659
KasI	GGCGCC	1 cut(s)	4
KpnI	GGTACC	1 cut(s)	1025
Kzo9I	GATC	3 cut(s)	240, 578, 640
LmnI	GCTCC	7 cut(s)	69, 145, 176, 227, 326, 334, 826
Lsp1109I	GCAGC	4 cut(s)	169, 206, 637, 797
LweI	GCATC	1 cut(s)	662
MaeI	CTAG	1 cut(s)	731
MaeII	ACGT	1 cut(s)	979
MaeIII	GTNAC	3 cut(s)	153, 314, 333
MalI	GATC	3 cut(s)	242, 580, 642
MboI	GATC	3 cut(s)	240, 578, 640
MboII	GAAGA	7 cut(s)	271, 274, 403, 406, 815, 998, 1163
MfeI	CAATTG	1 cut(s)	1133
MflI	RGATCY	2 cut(s)	240, 640
MhlI	GDGCHC	3 cut(s)	150, 331, 351
MlsI	TGGCCA	1 cut(s)	453
MluCI	AATT	7 cut(s)	572, 711, 743, 856, 898, 1043, 1133
MluNI	TGGCCA	1 cut(s)	453
Mly113I	GGCGCC	1 cut(s)	5
MlyI	GAGTC	3 cut(s)	1012, 1110, 1115
MmeI	TCCRAC	3 cut(s)	393, 1042, 1106
Mox20I	TGGCCA	1 cut(s)	453
Mph1103I	ATGCAT	1 cut(s)	388
MroXI	GAANNNNTTC	2 cut(s)	503, 522
MscI	TGGCCA	1 cut(s)	453
MseI	TTAA	2 cut(s)	570, 983
Msp20I	TGGCCA	1 cut(s)	453
MspA1I	CMGCKG	2 cut(s)	182, 219
MspI	CCGG	4 cut(s)	174, 195, 359, 374
MspR9I	CCNGG	6 cut(s)	195, 359, 360, 374, 693, 759
MunI	CAATTG	1 cut(s)	1133
MvaI	CCWGG	2 cut(s)	693, 759
MvnI	CGCG	1 cut(s)	233
MwoI	GCNNNNNNNGC	5 cut(s)	289, 406, 445, 656, 1135
NarI	GGCGCC	1 cut(s)	5
NciI	CCSGG	4 cut(s)	195, 359, 360, 374
NdeI	CATATG	1 cut(s)	1017
NdeII	GATC	3 cut(s)	240, 578, 640
NlaIII	CATG	4 cut(s)	452, 460, 514, 891
NlaIV	GGNNCC	7 cut(s)	6, 147, 172, 178, 642, 708, 1023
NsiI	ATGCAT	1 cut(s)	388
PdmI	GAANNNNTTC	2 cut(s)	503, 522
PfeI	GAWTC	2 cut(s)	111, 1012
PfoI	TCCNGGA	1 cut(s)	691
PkrI	GCNGC	8 cut(s)	181, 184, 218, 221, 235, 270, 652, 787
PleI	GAGTC	3 cut(s)	1011, 1110, 1115
PluTI	GGCGCC	1 cut(s)	8
PpsI	GAGTC	3 cut(s)	1011, 1110, 1115
Psp124BI	GAGCTC	1 cut(s)	331
Psp6I	CCWGG	2 cut(s)	691, 757
PspGI	CCWGG	2 cut(s)	691, 757
PspN4I	GGNNCC	7 cut(s)	6, 147, 172, 178, 642, 708, 1023
PspPI	GGNCC	2 cut(s)	707, 995
PstNI	CAGNNNCTG	1 cut(s)	650
PsuI	RGATCY	2 cut(s)	240, 640
RsaI	GTAC	2 cut(s)	668, 1023
RsaNI	GTAC	2 cut(s)	667, 1022
SacI	GAGCTC	1 cut(s)	331
SaqAI	TTAA	2 cut(s)	570, 983
SatI	GCNGC	8 cut(s)	180, 183, 217, 220, 234, 269, 651, 786
Sau3AI	GATC	3 cut(s)	240, 578, 640
Sau96I	GGNCC	2 cut(s)	707, 995
SchI	GAGTC	3 cut(s)	1012, 1110, 1115
ScrFI	CCNGG	6 cut(s)	195, 359, 360, 374, 693, 759
SduI	GDGCHC	3 cut(s)	150, 331, 351
SfaNI	GCATC	1 cut(s)	662
SfoI	GGCGCC	1 cut(s)	6
SinI	GGWCC	1 cut(s)	707
SmaI	CCCGGG	1 cut(s)	360
SmlI	CTYRAG	1 cut(s)	248
SmoI	CTYRAG	1 cut(s)	248
Sse9I	AATT	7 cut(s)	572, 711, 743, 856, 898, 1043, 1133
SspDI	GGCGCC	1 cut(s)	4
SspI	AATATT	1 cut(s)	927
SspMI	CTAG	1 cut(s)	731
SstI	GAGCTC	1 cut(s)	331
StyD4I	CCNGG	6 cut(s)	193, 357, 358, 372, 691, 757
StyI	CCWWGG	2 cut(s)	702, 730
TaaI	ACNGT	3 cut(s)	203, 320, 418
TaiI	ACGT	1 cut(s)	982
TaqI	TCGA	3 cut(s)	210, 228, 1119
TasI	AATT	7 cut(s)	572, 711, 743, 856, 898, 1043, 1133
TatI	WGTACW	1 cut(s)	666
TauI	GCSGC	4 cut(s)	182, 219, 236, 271
TfiI	GAWTC	2 cut(s)	111, 1012
Tru1I	TTAA	2 cut(s)	570, 983
Tru9I	TTAA	2 cut(s)	570, 983
TscAI	CASTG	3 cut(s)	616, 795, 1033
TseI	GCWGC	4 cut(s)	182, 219, 650, 785
TspDTI	ATGAA	6 cut(s)	496, 595, 785, 1004, 1056, 1119
TspGWI	ACGGA	1 cut(s)	321
TspMI	CCCGGG	1 cut(s)	358
TspRI	CASTG	3 cut(s)	616, 795, 1033
VpaK11BI	GGWCC	1 cut(s)	707
XapI	RAATTY	1 cut(s)	1043
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1058
XmaI	CCCGGG	1 cut(s)	358
XmaJI	CCTAGG	1 cut(s)	730
XmnI	GAANNNNTTC	2 cut(s)	503, 522
XspI	CTAG	1 cut(s)	731
Zsp2I	ATGCAT	1 cut(s)	388

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.