Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1D

Orthogroup ID

OG0007878

Physical Location & Seq

Genomic Coordinates Reverse (-)

60656737 .. 60660406

Gene Structure 3670 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1DG386900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1662 bp

ATGGCGCCTAAAACCCTCTCCTCCTTCCTCTCTCCCTTCACCTTCACACTCCCCAACCCCAAGCTCCTCAACCTCAACCTCCACCCCAACCCCACTCTCATCCTCTGCCGATTCTCTCAGCCCCACCAGAAACCACCCCTCTCGGAGCCCCAGTTACCCCAACCCGAAGGCACCGGAGCCGCTGCACCCACCCCCGGCGACCGTTTCCTCGAAAGCCGCTGCTCCTTCGACGCGGCTAAGATCTTGCTCAAGGAAAAGAAGAAGAAGCGGCTCAAAGAGAAGCCCTTGAAGCTCTCCACCGCCGTCGCTTGCTGTTACGGTTGCGGAGCTCCGTTACAGACTTCCGAGCCCGACGCCCCGGGTTATTCCGACCCGGAGACCTATGCATTGAAGAAGAAGCACCACCAGCTTAGAACTGTTATATGTGGAAGGTGCAAGCTTCTGTCGCATGGCCACATGATAACTGCTGTCGGTGGGAATGGTGGTTATGCTGGCGGGAAGCAGTTCATCATGGCGGAACAGCTTCGGGAGAAGCTCTCACATTTGCGATACGAGAGAGCGTTGATAGTTAAATTGGTTGATATAGTGGACTTCAATGGTAGCTTTTTGGCTCGTGTGCGTGATTTGGCCGGTGCGAATCCGATAATATTAGTGATTACTAAGGTTGATTTACTTCCCAAGGGGACTGATTTTAATTGTATTGGTGATTGGGTTGTGGAGGCCACTGTAAAGAAGAAGCTTAATGTTATGAGTGTTCATCTAACGAGTTCAAAGTCTTTGGTTGGAGTTGCTGGAGTTGCATCACAGATTCAAAAGGAAAAGAAGGGATCGGCAAATGTTGGGAAATCAGCTTTCATCAGTGCTTTACTGAAACTGATGGCGGAAAAGGATCCAGTTGCTGCATCAGCGCAGAAGTACAAACCAATACAATCTGCTGTTCCTGGAACTACCTTGGGTCCAATTCAAATAAATGCTTTCCTAGGAGGAGGGAAATTATATGATACACCTGGAGTTCACCTCCACCATAGGCAAGCAGCAGTGGTTCATTCAGAAGACCTACCTTCCCTTGCTCCTCAAAGTCGGCTTAGGGGTCAATCTTTGCCTAATTCTCAGGTTTCCTCTGGAAATATAACAACATGGAAAGGCAATTCTAATGATTTGAATGGCTATTCAATATTCTGGGGAGGTCTTGTCAGAGTAGATGTCTTGAAGGTTCTCCCTGAAACACGTTTAACATTTTATGGGCCAAAGAGTCTTCAGATTCATATGGTACCCACTGATGAGGCGGATGAATTTTACCAGAAACAAGTTGGAGTTTTATTGACACCTCCAACTGGGAAAGAAAGGGCAGATGAATGGAGAGGACTCGACTCTCAGCGTCAATTGCAGATAAAAGTTGAAGATGTGCAAAGGCCTGCATGTGATGTGGCTATATCAGGCTTAGGATGGATTAGCATCGAACCTATTTGCAGATTATTGAGAAGTTCTGATTCAAATTCAGAAAAAACTGCAGGGGAACTGCATTTAGCTGTGCATGTCCCCAAGCCAGTCGAAATATTTGTTAGGTCTCCAATCCCAGTGGGCAAGTCTGGAGCAGAGTGGTATCAGTATCGGGAGTTGACCGAAAAGGAAGAGGAAGAAAGACCAAAATGGCATTATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0001101 GO:0001505 GO:0003674 GO:0003824 GO:0003924 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006109 GO:0006807 GO:0006809 GO:0006950 GO:0006970 GO:0006979 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009507 GO:0009536 GO:0009628 GO:0009651 GO:0009657 GO:0009668 GO:0009889 GO:0009987 GO:0010027 GO:0010035 GO:0010193 GO:0010322 GO:0010565 GO:0010675 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017111 GO:0017144 GO:0019216 GO:0019220 GO:0019222 GO:0019747 GO:0022613 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0034641 GO:0042133 GO:0042136 GO:0042221 GO:0042254 GO:0042493 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044085 GO:0044237 GO:0044249 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0046209 GO:0046677 GO:0046890 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051174 GO:0051246 GO:0060255 GO:0061024 GO:0062012 GO:0065007 GO:0065008 GO:0071071 GO:0071840 GO:0072593 GO:0080090 GO:0099402 GO:1901700 GO:1903409 GO:1903725 GO:2001057

KEGG Pathways

Metabolic & Signaling

ko00220 ko00330 ko01100 ko01110 ko01130 ko04626 map00220 map00330 map01100 map01110 map01130 map04626

Pfam Domains

Protein Families

MMR_HSR1

Protein Analysis

553

Amino Acids

60.65

Weight (kDa)

9.29

Isoelectric Point (pI)

40.16

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
YqeH-like_C	PF21516	410 - 487	7.3e-11	YqeH-like, C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007878)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G47450 AT3G47450
fragaria_vesca	FvH4_7g25681 FvH4_7g27380 FvH4_7g27380 FvH4_7g28391
malus_domestica	MD07G1252900.v1.1
prunus_persica	Prupe.2G276500_v2.0.a1
pyrus_communis	pycom07g22550
rosa_chinensis	RchiOBHm_Chr1g0374211
rosa_laevigata	RLG00000026755
rosa_multiflora	Rmu_co8240197.1_g000001 Rmu_ssc0000007.1_g000041 Rmu_ssc0000450.1_g000005
rosa_roxburghii	Rroxscaffold_3G00227680 Rroxscaffold_4G00283640 Rroxscaffold_7G00194520
rosa_rugosa	Rorug01G0381400 Rorug01G0381500
rosa_samantha	Rh1AG392400 Rh1BG356400 Rh1CG369400 Rh1DG386900
rosa_wichuraiana	Rw1G034330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1270
AccB1I	GGYRCC	3 cut(s)	4, 170, 1270
AccII	CGCG	1 cut(s)	233
AclWI	GGATC	3 cut(s)	835, 884, 897
AcoI	YGGCCR	2 cut(s)	451, 627
AcsI	RAATTY	2 cut(s)	1292, 1495
AcuI	CTGAAG	1 cut(s)	1241
AcyI	GRCGYC	2 cut(s)	5, 354
AfaI	GTAC	2 cut(s)	917, 1272
AfiI	CCNNNNNNNGG	2 cut(s)	194, 1334
AflIII	ACRYGT	1 cut(s)	1226
AjnI	CCWGG	2 cut(s)	940, 1006
Alw21I	GWGCWC	1 cut(s)	331
Alw26I	GTCTC	2 cut(s)	371, 1572
AlwI	GGATC	3 cut(s)	835, 884, 897
AlwNI	CAGNNNCTG	1 cut(s)	899
Ama87I	CYCGRG	1 cut(s)	358
AoxI	GGCC	5 cut(s)	451, 627, 720, 1244, 1412
ApeKI	GCWGC	4 cut(s)	182, 219, 899, 1034
ApoI	RAATTY	2 cut(s)	1292, 1495
Asp700I	GAANNNNTTC	2 cut(s)	503, 522
Asp718I	GGTACC	1 cut(s)	1270
AspA2I	CCTAGG	1 cut(s)	979
AspLEI	GCGC	2 cut(s)	7, 910
AspS9I	GGNCC	2 cut(s)	956, 1244
AsuC2I	CCSGG	4 cut(s)	195, 359, 360, 374
AsuHPI	GGTGA	3 cut(s)	31, 716, 1007
AvaI	CYCGRG	1 cut(s)	358
AvaII	GGWCC	1 cut(s)	956
AvrII	CCTAGG	1 cut(s)	979
BalI	TGGCCA	1 cut(s)	453
BamHI	GGATCC	1 cut(s)	889
BanI	GGYRCC	3 cut(s)	4, 170, 1270
BanII	GRGCYC	3 cut(s)	150, 331, 351
BauI	CACGAG	1 cut(s)	612
BbsI	GAAGAC	2 cut(s)	1059, 1247
Bbv12I	GWGCWC	1 cut(s)	331
BbvI	GCAGC	4 cut(s)	169, 206, 886, 1046
BccI	CCATC	2 cut(s)	871, 1440
BceAI	ACGGC	1 cut(s)	287
BciT130I	CCWGG	2 cut(s)	942, 1008
BcnI	CCSGG	4 cut(s)	195, 359, 360, 374
BcoDI	GTCTC	2 cut(s)	371, 1572
BfaI	CTAG	1 cut(s)	980
BfmI	CTRYAG	1 cut(s)	1509
BfoI	RGCGCY	1 cut(s)	8
BglII	AGATCT	1 cut(s)	240
BisI	GCNGC	8 cut(s)	180, 183, 217, 220, 234, 269, 900, 1035
BlnI	CCTAGG	1 cut(s)	979
BlsI	GCNGC	8 cut(s)	181, 184, 218, 221, 235, 270, 901, 1036
Bme1390I	CCNGG	6 cut(s)	195, 359, 360, 374, 942, 1008
Bme18I	GGWCC	1 cut(s)	956
BmeT110I	CYCGRG	1 cut(s)	358
BmgT120I	GGNCC	2 cut(s)	956, 1244
BmiI	GGNNCC	7 cut(s)	6, 147, 172, 178, 891, 957, 1272
BmrFI	CCNGG	6 cut(s)	195, 359, 360, 374, 942, 1008
BmrI	ACTGGG	3 cut(s)	145, 1344, 1571
BmsI	GCATC	3 cut(s)	809, 911, 1464
BmuI	ACTGGG	3 cut(s)	145, 1344, 1571
BpiI	GAAGAC	2 cut(s)	1059, 1247
BplI	GAGNNNNNCTC	4 cut(s)	521, 553, 1002, 1034
BpmI	CTGGAG	3 cut(s)	813, 1029, 1611
Bpu10I	CCTNAGC	2 cut(s)	1085, 1441
BpuEI	CTTGAG	1 cut(s)	233
BpuMI	CCSGG	4 cut(s)	195, 359, 360, 374
BsaBI	GATNNNNATC	1 cut(s)	1454
BsaHI	GRCGYC	2 cut(s)	5, 354
BsaI	GGTCTC	2 cut(s)	371, 1572
BsaJI	CCNNGG	6 cut(s)	193, 357, 358, 678, 951, 979
BsaWI	WCCGGW	1 cut(s)	173
BsaXI	ACNNNNNCTCC	4 cut(s)	137, 167, 1176, 1206
Bsc4I	CCNNNNNNNGG	2 cut(s)	194, 1334
Bse118I	RCCGGY	1 cut(s)	629
Bse1I	ACTGG	5 cut(s)	151, 893, 1339, 1547, 1577
Bse8I	GATNNNNATC	1 cut(s)	1454
BseBI	CCWGG	2 cut(s)	942, 1008
BseDI	CCNNGG	6 cut(s)	193, 357, 358, 678, 951, 979
BseGI	GGATG	3 cut(s)	99, 1294, 1451
BseJI	GATNNNNATC	1 cut(s)	1454
BseLI	CCNNNNNNNGG	2 cut(s)	194, 1334
BseMII	CTCAG	3 cut(s)	131, 1124, 1388
BseNI	ACTGG	5 cut(s)	151, 893, 1339, 1547, 1577
BseRI	GAGGAG	4 cut(s)	10, 56, 999, 1062
BseXI	GCAGC	4 cut(s)	169, 206, 886, 1046
BsgI	GTGCAG	1 cut(s)	168
Bsh1236I	CGCG	1 cut(s)	233
Bsh1285I	CGRYCG	1 cut(s)	202
BshFI	GGCC	5 cut(s)	453, 629, 722, 1246, 1414
BshNI	GGYRCC	3 cut(s)	4, 170, 1270
BsiEI	CGRYCG	1 cut(s)	202
BsiHKAI	GWGCWC	1 cut(s)	331
BsiHKCI	CYCGRG	1 cut(s)	358
BsiSI	CCGG	5 cut(s)	174, 195, 359, 374, 630
BslFI	GGGAC	2 cut(s)	697, 1523
BslI	CCNNNNNNNGG	2 cut(s)	194, 1334
BsmAI	GTCTC	2 cut(s)	371, 1572
BsmFI	GGGAC	2 cut(s)	697, 1523
BsnI	GGCC	5 cut(s)	453, 629, 722, 1246, 1414
Bso31I	GGTCTC	2 cut(s)	371, 1572
BsoBI	CYCGRG	1 cut(s)	358
Bsp1286I	GDGCHC	3 cut(s)	150, 331, 351
Bsp143I	GATC	3 cut(s)	240, 827, 889
BspANI	GGCC	5 cut(s)	453, 629, 722, 1246, 1414
BspCNI	CTCAG	3 cut(s)	130, 1123, 1387
BspFNI	CGCG	1 cut(s)	233
BspLI	GGNNCC	7 cut(s)	6, 147, 172, 178, 891, 957, 1272
BspMAI	CTGCAG	1 cut(s)	1513
BspPI	GGATC	3 cut(s)	835, 884, 897
BspT107I	GGYRCC	3 cut(s)	4, 170, 1270
BspTNI	GGTCTC	2 cut(s)	371, 1572
BsrFI	RCCGGY	1 cut(s)	629
BsrI	ACTGG	5 cut(s)	151, 893, 1339, 1547, 1577
BssAI	RCCGGY	1 cut(s)	629
BssECI	CCNNGG	6 cut(s)	193, 357, 358, 678, 951, 979
BssMI	GATC	3 cut(s)	240, 827, 889
BssNI	GRCGYC	2 cut(s)	5, 354
BssSI	CACGAG	1 cut(s)	612
BssT1I	CCWWGG	3 cut(s)	678, 951, 979
Bst2BI	CACGAG	1 cut(s)	612
Bst2UI	CCWGG	2 cut(s)	942, 1008
Bst4CI	ACNGT	4 cut(s)	203, 320, 418, 727
Bst6I	CTCTTC	1 cut(s)	1626
BstACI	GRCGYC	2 cut(s)	5, 354
BstC8I	GCNNGC	5 cut(s)	310, 437, 493, 1032, 1416
BstDEI	CTNAG	8 cut(s)	117, 237, 410, 660, 1085, 1110, 1374, 1441
BstF5I	GGATG	3 cut(s)	99, 1294, 1451
BstFNI	CGCG	1 cut(s)	233
BstH2I	RGCGCY	1 cut(s)	8
BstHHI	GCGC	2 cut(s)	7, 910
BstKTI	GATC	3 cut(s)	243, 830, 892
BstMAI	GTCTC	2 cut(s)	371, 1572
BstMBI	GATC	3 cut(s)	240, 827, 889
BstMCI	CGRYCG	1 cut(s)	202
BstMWI	GCNNNNNNNGC	6 cut(s)	289, 406, 445, 797, 905, 1384
BstNI	CCWGG	2 cut(s)	942, 1008
BstNSI	RCATGY	2 cut(s)	1422, 1538
BstSCI	CCNGG	6 cut(s)	193, 357, 358, 372, 940, 1006
BstSFI	CTRYAG	1 cut(s)	1509
BstUI	CGCG	1 cut(s)	233
BstV1I	GCAGC	4 cut(s)	169, 206, 886, 1046
BstV2I	GAAGAC	2 cut(s)	1059, 1247
BstX2I	RGATCY	2 cut(s)	240, 889
BstYI	RGATCY	2 cut(s)	240, 889
BsuRI	GGCC	5 cut(s)	453, 629, 722, 1246, 1414
BtsCI	GGATG	3 cut(s)	99, 1294, 1451
BtsI	GCAGTG	1 cut(s)	1044
BtsIMutI	CAGTG	5 cut(s)	723, 865, 1044, 1275, 1584
Cac8I	GCNNGC	5 cut(s)	310, 437, 493, 1032, 1416
CaiI	CAGNNNCTG	1 cut(s)	899
CfoI	GCGC	2 cut(s)	7, 910
Cfr10I	RCCGGY	1 cut(s)	629
Cfr13I	GGNCC	2 cut(s)	956, 1244
Cfr9I	CCCGGG	1 cut(s)	358
CseI	GACGC	3 cut(s)	239, 362, 1367
Csp6I	GTAC	2 cut(s)	916, 1271
CspCI	CAANNNNNGTGG	2 cut(s)	1560, 1595
CviAII	CATG	6 cut(s)	449, 457, 511, 1137, 1419, 1535
CviQI	GTAC	2 cut(s)	916, 1271
DdeI	CTNAG	8 cut(s)	117, 237, 410, 660, 1085, 1110, 1374, 1441
DinI	GGCGCC	1 cut(s)	6
DpnI	GATC	3 cut(s)	242, 829, 891
DpnII	GATC	3 cut(s)	240, 827, 889
EaeI	YGGCCR	2 cut(s)	451, 627
Eam1104I	CTCTTC	1 cut(s)	1626
EarI	CTCTTC	1 cut(s)	1626
EciI	GGCGGA	3 cut(s)	530, 896, 1301
Ecl136II	GAGCTC	1 cut(s)	329
Eco130I	CCWWGG	3 cut(s)	678, 951, 979
Eco147I	AGGCCT	1 cut(s)	1414
Eco24I	GRGCYC	3 cut(s)	150, 331, 351
Eco31I	GGTCTC	2 cut(s)	371, 1572
Eco47I	GGWCC	1 cut(s)	956
Eco53kI	GAGCTC	1 cut(s)	329
Eco57I	CTGAAG	1 cut(s)	1241
Eco88I	CYCGRG	1 cut(s)	358
EcoICRI	GAGCTC	1 cut(s)	329
EcoRII	CCWGG	2 cut(s)	940, 1006
EcoT14I	CCWWGG	3 cut(s)	678, 951, 979
EcoT22I	ATGCAT	1 cut(s)	388
EcoT38I	GRGCYC	3 cut(s)	150, 331, 351
EgeI	GGCGCC	1 cut(s)	6
EheI	GGCGCC	1 cut(s)	6
ErhI	CCWWGG	3 cut(s)	678, 951, 979
FaeI	CATG	6 cut(s)	452, 460, 514, 1140, 1422, 1538
FaqI	GGGAC	2 cut(s)	697, 1523
FatI	CATG	6 cut(s)	448, 456, 510, 1136, 1418, 1534
FauI	CCCGC	1 cut(s)	488
FauNDI	CATATG	1 cut(s)	1266
Fnu4HI	GCNGC	8 cut(s)	180, 183, 217, 220, 234, 269, 900, 1035
FokI	GGATG	3 cut(s)	86, 1301, 1458
FriOI	GRGCYC	3 cut(s)	150, 331, 351
Fsp4HI	GCNGC	8 cut(s)	180, 183, 217, 220, 234, 269, 900, 1035
FspBI	CTAG	1 cut(s)	980
GlaI	GCGC	2 cut(s)	6, 909
GluI	GCNGC	8 cut(s)	180, 183, 217, 220, 234, 269, 900, 1035
GsuI	CTGGAG	3 cut(s)	813, 1029, 1611
HaeII	RGCGCY	1 cut(s)	8
HaeIII	GGCC	5 cut(s)	453, 629, 722, 1246, 1414
HapII	CCGG	5 cut(s)	174, 195, 359, 374, 630
HgaI	GACGC	3 cut(s)	239, 362, 1367
HhaI	GCGC	2 cut(s)	7, 910
Hin1I	GRCGYC	2 cut(s)	5, 354
Hin1II	CATG	6 cut(s)	452, 460, 514, 1140, 1422, 1538
Hin6I	GCGC	2 cut(s)	5, 908
HinP1I	GCGC	2 cut(s)	5, 908
HincII	GTYRAC	1 cut(s)	1620
HindII	GTYRAC	1 cut(s)	1620
HindIII	AAGCTT	2 cut(s)	437, 737
HinfI	GANTC	8 cut(s)	111, 637, 808, 1252, 1261, 1365, 1370, 1490
HpaII	CCGG	5 cut(s)	174, 195, 359, 374, 630
HphI	GGTGA	3 cut(s)	31, 716, 1007
Hpy166II	GTNNAC	3 cut(s)	589, 1015, 1620
Hpy188I	TCNGA	9 cut(s)	145, 346, 370, 642, 1051, 1196, 1260, 1489, 1501
Hpy188III	TCNNGA	5 cut(s)	527, 1122, 1207, 1590, 1613
Hpy8I	GTNNAC	3 cut(s)	589, 1015, 1620
Hpy99I	CGWCG	3 cut(s)	233, 308, 356
HpyAV	CCTTC	9 cut(s)	34, 46, 52, 161, 235, 423, 817, 1071, 1204
HpyCH4III	ACNGT	4 cut(s)	203, 320, 418, 727
HpyCH4IV	ACGT	1 cut(s)	1228
HpyF10VI	GCNNNNNNNGC	6 cut(s)	289, 406, 445, 797, 905, 1384
HpyF3I	CTNAG	8 cut(s)	117, 237, 410, 660, 1085, 1110, 1374, 1441
HpySE526I	ACGT	1 cut(s)	1228
Hsp92I	GRCGYC	2 cut(s)	5, 354
Hsp92II	CATG	6 cut(s)	452, 460, 514, 1140, 1422, 1538
HspAI	GCGC	2 cut(s)	5, 908
KasI	GGCGCC	1 cut(s)	4
KpnI	GGTACC	1 cut(s)	1274
Kzo9I	GATC	3 cut(s)	240, 827, 889
LmnI	GCTCC	8 cut(s)	69, 145, 176, 227, 326, 334, 1075, 1592
Lsp1109I	GCAGC	4 cut(s)	169, 206, 886, 1046
LweI	GCATC	3 cut(s)	809, 911, 1464
MaeI	CTAG	1 cut(s)	980
MaeII	ACGT	1 cut(s)	1228
MaeIII	GTNAC	3 cut(s)	153, 314, 333
MalI	GATC	3 cut(s)	242, 829, 891
MboI	GATC	3 cut(s)	240, 827, 889
MfeI	CAATTG	1 cut(s)	1382
MflI	RGATCY	2 cut(s)	240, 889
MhlI	GDGCHC	3 cut(s)	150, 331, 351
MlsI	TGGCCA	1 cut(s)	453
MluCI	AATT	9 cut(s)	572, 694, 960, 992, 1105, 1147, 1292, 1382, 1495
MluNI	TGGCCA	1 cut(s)	453
Mly113I	GGCGCC	1 cut(s)	5
MlyI	GAGTC	3 cut(s)	1261, 1359, 1364
MmeI	TCCRAC	4 cut(s)	393, 763, 1291, 1355
Mox20I	TGGCCA	1 cut(s)	453
Mph1103I	ATGCAT	1 cut(s)	388
MroXI	GAANNNNTTC	2 cut(s)	503, 522
MscI	TGGCCA	1 cut(s)	453
MseI	TTAA	4 cut(s)	570, 693, 741, 1232
Msp20I	TGGCCA	1 cut(s)	453
MspA1I	CMGCKG	2 cut(s)	182, 219
MspI	CCGG	5 cut(s)	174, 195, 359, 374, 630
MspR9I	CCNGG	6 cut(s)	195, 359, 360, 374, 942, 1008
MunI	CAATTG	1 cut(s)	1382
MvaI	CCWGG	2 cut(s)	942, 1008
MvnI	CGCG	1 cut(s)	233
MwoI	GCNNNNNNNGC	6 cut(s)	289, 406, 445, 797, 905, 1384
NarI	GGCGCC	1 cut(s)	5
NciI	CCSGG	4 cut(s)	195, 359, 360, 374
NdeI	CATATG	1 cut(s)	1266
NdeII	GATC	3 cut(s)	240, 827, 889
NlaIII	CATG	6 cut(s)	452, 460, 514, 1140, 1422, 1538
NlaIV	GGNNCC	7 cut(s)	6, 147, 172, 178, 891, 957, 1272
NsiI	ATGCAT	1 cut(s)	388
NspI	RCATGY	2 cut(s)	1422, 1538
PceI	AGGCCT	1 cut(s)	1414
PdmI	GAANNNNTTC	2 cut(s)	503, 522
PfeI	GAWTC	5 cut(s)	111, 637, 808, 1261, 1490
PfoI	TCCNGGA	1 cut(s)	940
PkrI	GCNGC	8 cut(s)	181, 184, 218, 221, 235, 270, 901, 1036
PleI	GAGTC	3 cut(s)	1260, 1359, 1364
PluTI	GGCGCC	1 cut(s)	8
PpsI	GAGTC	3 cut(s)	1260, 1359, 1364
Psp124BI	GAGCTC	1 cut(s)	331
Psp6I	CCWGG	2 cut(s)	940, 1006
PspGI	CCWGG	2 cut(s)	940, 1006
PspN4I	GGNNCC	7 cut(s)	6, 147, 172, 178, 891, 957, 1272
PspPI	GGNCC	2 cut(s)	956, 1244
PstI	CTGCAG	1 cut(s)	1513
PstNI	CAGNNNCTG	1 cut(s)	899
PsuI	RGATCY	2 cut(s)	240, 889
RsaI	GTAC	2 cut(s)	917, 1272
RsaNI	GTAC	2 cut(s)	916, 1271
SacI	GAGCTC	1 cut(s)	331
SaqAI	TTAA	4 cut(s)	570, 693, 741, 1232
SatI	GCNGC	8 cut(s)	180, 183, 217, 220, 234, 269, 900, 1035
Sau3AI	GATC	3 cut(s)	240, 827, 889
Sau96I	GGNCC	2 cut(s)	956, 1244
SchI	GAGTC	3 cut(s)	1261, 1359, 1364
ScrFI	CCNGG	6 cut(s)	195, 359, 360, 374, 942, 1008
SduI	GDGCHC	3 cut(s)	150, 331, 351
SfaNI	GCATC	3 cut(s)	809, 911, 1464
SfcI	CTRYAG	1 cut(s)	1509
SfoI	GGCGCC	1 cut(s)	6
SinI	GGWCC	1 cut(s)	956
SmaI	CCCGGG	1 cut(s)	360
SmlI	CTYRAG	1 cut(s)	248
SmoI	CTYRAG	1 cut(s)	248
Sse9I	AATT	9 cut(s)	572, 694, 960, 992, 1105, 1147, 1292, 1382, 1495
SseBI	AGGCCT	1 cut(s)	1414
SspDI	GGCGCC	1 cut(s)	4
SspI	AATATT	3 cut(s)	648, 1176, 1557
SspMI	CTAG	1 cut(s)	980
SstI	GAGCTC	1 cut(s)	331
StuI	AGGCCT	1 cut(s)	1414
StyD4I	CCNGG	6 cut(s)	193, 357, 358, 372, 940, 1006
StyI	CCWWGG	3 cut(s)	678, 951, 979
TaaI	ACNGT	4 cut(s)	203, 320, 418, 727
TaiI	ACGT	1 cut(s)	1231
TaqI	TCGA	5 cut(s)	210, 228, 1368, 1458, 1551
TaqII	GACCGA	1 cut(s)	1637
TasI	AATT	9 cut(s)	572, 694, 960, 992, 1105, 1147, 1292, 1382, 1495
TatI	WGTACW	1 cut(s)	915
TauI	GCSGC	4 cut(s)	182, 219, 236, 271
TfiI	GAWTC	5 cut(s)	111, 637, 808, 1261, 1490
Tru1I	TTAA	4 cut(s)	570, 693, 741, 1232
Tru9I	TTAA	4 cut(s)	570, 693, 741, 1232
TscAI	CASTG	5 cut(s)	730, 865, 1044, 1282, 1584
TseI	GCWGC	4 cut(s)	182, 219, 899, 1034
TspDTI	ATGAA	7 cut(s)	496, 746, 844, 1034, 1253, 1305, 1368
TspGWI	ACGGA	1 cut(s)	321
TspMI	CCCGGG	1 cut(s)	358
TspRI	CASTG	5 cut(s)	730, 865, 1044, 1282, 1584
VpaK11BI	GGWCC	1 cut(s)	956
XapI	RAATTY	2 cut(s)	1292, 1495
XceI	RCATGY	2 cut(s)	1422, 1538
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1307
XmaI	CCCGGG	1 cut(s)	358
XmaJI	CCTAGG	1 cut(s)	979
XmnI	GAANNNNTTC	2 cut(s)	503, 522
XspI	CTAG	1 cut(s)	980
Zsp2I	ATGCAT	1 cut(s)	388

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.