Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0007878

Physical Location & Seq

Genomic Coordinates Reverse (-)

62093881 .. 62097892

Gene Structure 4012 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ59804

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1683 bp

ATGGCGCCTAAAACCCTCTCCTCCTTCCTCTCTCCCTTCACCTTCACACTCCCCAACCCCAAGCTCCTCAACCTCAACCTCCACCCCAACCCCACTCTCATCCTCTGCCGATTCTCTCAGCCCCACCAGAAACCACCTCTCTCGGAGCCCCAGTTACCCCAACCCGAAGGCACCGGAGCCGCTGCACCCACCCCCGGCGACCGCTTCCTCGAAAGCCGCCGCTCCTTCGACGCGGCTAAGATCTTGCTCAAGGAAAAGAAGAAGAAGCGGCTCAAAGAGAAGCCCTTGAAGCTTTCCACCGCCGTCGCTTGCTGTTACGGTTGCGGAGCTCCGTTACAGACTTCCGAGCCCGACGCCCCGGGTTATTCCGACCCGGAGACCTATGCATTGAAGAAGAAGCACCACCAGCTTAGAACTGTTATATGTGGAAGGTGCAAGCTCCTGTCTCATGGCCACATGATAACTGCCGTGGGTGGGAATGGTGGTTATTCTGGCGGGAAGCAGTTCATCATGGCCGAACAGCTTCGGGAGAAGCTCTCGCATTTGCGCTACGAGAGAGCGTTGATAGTTAAATTGGTTGATATAGTGGACTTCAATGGTAGCTTTTTGGCTCGTGTGCGTGATTTGGCCGGTGCGAATCCGATAATATTAGTGATTACTAAGGTTGATTTACTTCCCAAGGGGACTGATTTTAATTGTATTGGTGATTGGGTTGTGGAGGCCACTGTAAAGAAGAAGCTTAATGTTATGAGTGTTCATCTAACGAGTTCAAAGTCTTTGGTTGGAGTAGCTGGAGTTGCATCAGAGATTCAAAAGGAAAAGAAGGGGCGGGACGTGTATGTTATGGGATCGGCAAATGTTGGGAAATCAGCTTTCATCAGTGCTTTACTGAAACTGATGGCGGAAAAGGATCCAGTTGCTGCATCAGCGCAGAAGTACAAACCAATACAATCTGCTGTTCCTGGAACTACCTTGGGTCCAATTCAAATAAATGCTTTCCTAGGAGGAGGGAAATTATATGATACACCTGGAGTTCACCTCCACCATAGGCAAGCAGCAGTGGTTCATTCAGAAGACCTACCTTCCCTTGCTCCTCAAAGTAGGCTTAGGGGTCAATCTTTGCCTAATTCTCAGGTTTCCTCTGGAAATATAACAACATGGAAAGGCAATTCTAATGATTTGAATGGCTATTCAATATTCTGGGGAGGTCTTGTCAGAGTTGATGTCTTGAAGGTTCTCCCTGAAACACGTTTAACATTTTATGGGCCAAAGAGTCTTCAGATTCATATGGTACCCACTGATGAGGCGGATGAATTTTACCAGAAACAAGTTGGAGTTTTATTGACACCTCCAACTGGGAAAGAAAGGGCAGATGAATGGAGAGGACTCGACTCTCAGCGTCAATTGCAGATAAAAGTTGAAGATGTGCAAAGGCCTGCATGTGATGTGGCTATATCAGGCTTAGGATGGATTAGCATCGAACCTATTTGCAGATTATTGAGAAGTTCTGATTCAAATTCAGAAAAAACTGCAGGGGAACTGCATTTAGCTGTGCATGTCCCCAAGCCAGTCGAAATATTTGTTAGGTCTCCAATCCCAGTGGGCAAGTCTGGAGCAGAGTGGTATCAGTATCGGGAGTTGACCGAAAAGGAAGAGGAAGAAAGACCAAAATGGTATTATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0001101 GO:0001505 GO:0003674 GO:0003824 GO:0003924 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006109 GO:0006807 GO:0006809 GO:0006950 GO:0006970 GO:0006979 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009507 GO:0009536 GO:0009628 GO:0009651 GO:0009657 GO:0009668 GO:0009889 GO:0009987 GO:0010027 GO:0010035 GO:0010193 GO:0010322 GO:0010565 GO:0010675 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017111 GO:0017144 GO:0019216 GO:0019220 GO:0019222 GO:0019747 GO:0022613 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0034641 GO:0042133 GO:0042136 GO:0042221 GO:0042254 GO:0042493 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044085 GO:0044237 GO:0044249 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0046209 GO:0046677 GO:0046890 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051174 GO:0051246 GO:0060255 GO:0061024 GO:0062012 GO:0065007 GO:0065008 GO:0071071 GO:0071840 GO:0072593 GO:0080090 GO:0099402 GO:1901700 GO:1903409 GO:1903725 GO:2001057

KEGG Pathways

Metabolic & Signaling

ko00220 ko00330 ko01100 ko01110 ko01130 ko04626 map00220 map00330 map01100 map01110 map01130 map04626

Pfam Domains

Protein Families

MMR_HSR1

Protein Analysis

560

Amino Acids

61.57

Weight (kDa)

9.3

Isoelectric Point (pI)

40.39

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MMR_HSR1	PF01926	279 - 349	9.6e-07	50S ribosome-binding GTPase
YqeH-like_C	PF21516	417 - 494	7.5e-11	YqeH-like, C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007878)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G47450 AT3G47450
fragaria_vesca	FvH4_7g25681 FvH4_7g27380 FvH4_7g27380 FvH4_7g28391
malus_domestica	MD07G1252900.v1.1
prunus_persica	Prupe.2G276500_v2.0.a1
pyrus_communis	pycom07g22550
rosa_chinensis	RchiOBHm_Chr1g0374211
rosa_laevigata	RLG00000026755
rosa_multiflora	Rmu_co8240197.1_g000001 Rmu_ssc0000007.1_g000041 Rmu_ssc0000450.1_g000005
rosa_roxburghii	Rroxscaffold_3G00227680 Rroxscaffold_4G00283640 Rroxscaffold_7G00194520
rosa_rugosa	Rorug01G0381400 Rorug01G0381500
rosa_samantha	Rh1AG392400 Rh1BG356400 Rh1CG369400 Rh1DG386900
rosa_wichuraiana	Rw1G034330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1291
AccB1I	GGYRCC	3 cut(s)	4, 170, 1291
AccBSI	CCGCTC	1 cut(s)	222
AccII	CGCG	1 cut(s)	233
AclWI	GGATC	3 cut(s)	856, 905, 918
AcoI	YGGCCR	3 cut(s)	451, 513, 627
AcsI	RAATTY	2 cut(s)	1313, 1516
AcuI	CTGAAG	1 cut(s)	1262
AcyI	GRCGYC	2 cut(s)	5, 354
AfaI	GTAC	2 cut(s)	938, 1293
AfiI	CCNNNNNNNGG	3 cut(s)	194, 474, 1355
AflIII	ACRYGT	2 cut(s)	834, 1247
AjiI	CACGTC	1 cut(s)	835
AjnI	CCWGG	2 cut(s)	961, 1027
Alw21I	GWGCWC	1 cut(s)	331
Alw26I	GTCTC	3 cut(s)	371, 450, 1593
AlwI	GGATC	3 cut(s)	856, 905, 918
AlwNI	CAGNNNCTG	1 cut(s)	920
Ama87I	CYCGRG	1 cut(s)	358
AoxI	GGCC	6 cut(s)	451, 513, 627, 720, 1265, 1433
ApeKI	GCWGC	3 cut(s)	182, 920, 1055
ApoI	RAATTY	2 cut(s)	1313, 1516
Asp700I	GAANNNNTTC	2 cut(s)	503, 522
Asp718I	GGTACC	1 cut(s)	1291
AspA2I	CCTAGG	1 cut(s)	1000
AspLEI	GCGC	3 cut(s)	7, 549, 931
AspS9I	GGNCC	2 cut(s)	977, 1265
AsuC2I	CCSGG	4 cut(s)	195, 359, 360, 374
AsuHPI	GGTGA	3 cut(s)	31, 716, 1028
AvaI	CYCGRG	1 cut(s)	358
AvaII	GGWCC	1 cut(s)	977
AvrII	CCTAGG	1 cut(s)	1000
BalI	TGGCCA	1 cut(s)	453
BamHI	GGATCC	1 cut(s)	910
BanI	GGYRCC	3 cut(s)	4, 170, 1291
BanII	GRGCYC	3 cut(s)	150, 331, 351
BauI	CACGAG	1 cut(s)	612
BbsI	GAAGAC	2 cut(s)	1080, 1268
Bbv12I	GWGCWC	1 cut(s)	331
BbvI	GCAGC	3 cut(s)	169, 907, 1067
BccI	CCATC	2 cut(s)	892, 1461
BceAI	ACGGC	2 cut(s)	287, 452
BciT130I	CCWGG	2 cut(s)	963, 1029
BcnI	CCSGG	4 cut(s)	195, 359, 360, 374
BcoDI	GTCTC	3 cut(s)	371, 450, 1593
BfaI	CTAG	1 cut(s)	1001
BfmI	CTRYAG	1 cut(s)	1530
BfoI	RGCGCY	1 cut(s)	8
BglII	AGATCT	1 cut(s)	240
BisI	GCNGC	8 cut(s)	180, 183, 217, 220, 234, 269, 921, 1056
BlnI	CCTAGG	1 cut(s)	1000
BlsI	GCNGC	8 cut(s)	181, 184, 218, 221, 235, 270, 922, 1057
Bme1390I	CCNGG	6 cut(s)	195, 359, 360, 374, 963, 1029
Bme18I	GGWCC	1 cut(s)	977
BmeT110I	CYCGRG	1 cut(s)	358
BmgBI	CACGTC	1 cut(s)	835
BmgT120I	GGNCC	2 cut(s)	977, 1265
BmiI	GGNNCC	7 cut(s)	6, 147, 172, 178, 912, 978, 1293
BmrFI	CCNGG	6 cut(s)	195, 359, 360, 374, 963, 1029
BmrI	ACTGGG	3 cut(s)	145, 1365, 1592
BmsI	GCATC	3 cut(s)	809, 932, 1485
BmuI	ACTGGG	3 cut(s)	145, 1365, 1592
BpiI	GAAGAC	2 cut(s)	1080, 1268
BplI	GAGNNNNNCTC	4 cut(s)	521, 553, 1023, 1055
BpmI	CTGGAG	3 cut(s)	813, 1050, 1632
Bpu10I	CCTNAGC	2 cut(s)	1106, 1462
BpuEI	CTTGAG	1 cut(s)	233
BpuMI	CCSGG	4 cut(s)	195, 359, 360, 374
BsaBI	GATNNNNATC	1 cut(s)	1475
BsaHI	GRCGYC	2 cut(s)	5, 354
BsaI	GGTCTC	2 cut(s)	371, 1593
BsaJI	CCNNGG	7 cut(s)	193, 357, 358, 468, 678, 972, 1000
BsaWI	WCCGGW	1 cut(s)	173
BsaXI	ACNNNNNCTCC	4 cut(s)	137, 167, 1197, 1227
Bsc4I	CCNNNNNNNGG	3 cut(s)	194, 474, 1355
Bse118I	RCCGGY	1 cut(s)	629
Bse1I	ACTGG	5 cut(s)	151, 914, 1360, 1568, 1598
Bse8I	GATNNNNATC	1 cut(s)	1475
BseBI	CCWGG	2 cut(s)	963, 1029
BseDI	CCNNGG	7 cut(s)	193, 357, 358, 468, 678, 972, 1000
BseGI	GGATG	3 cut(s)	99, 1315, 1472
BseJI	GATNNNNATC	1 cut(s)	1475
BseLI	CCNNNNNNNGG	3 cut(s)	194, 474, 1355
BseMII	CTCAG	3 cut(s)	131, 1145, 1409
BseNI	ACTGG	5 cut(s)	151, 914, 1360, 1568, 1598
BseRI	GAGGAG	4 cut(s)	10, 56, 1020, 1083
BseXI	GCAGC	3 cut(s)	169, 907, 1067
BsgI	GTGCAG	1 cut(s)	168
Bsh1236I	CGCG	1 cut(s)	233
Bsh1285I	CGRYCG	1 cut(s)	202
BshFI	GGCC	6 cut(s)	453, 515, 629, 722, 1267, 1435
BshNI	GGYRCC	3 cut(s)	4, 170, 1291
BsiEI	CGRYCG	1 cut(s)	202
BsiHKAI	GWGCWC	1 cut(s)	331
BsiHKCI	CYCGRG	1 cut(s)	358
BsiSI	CCGG	5 cut(s)	174, 195, 359, 374, 630
BslFI	GGGAC	3 cut(s)	697, 845, 1544
BslI	CCNNNNNNNGG	3 cut(s)	194, 474, 1355
BsmAI	GTCTC	3 cut(s)	371, 450, 1593
BsmFI	GGGAC	3 cut(s)	697, 845, 1544
BsnI	GGCC	6 cut(s)	453, 515, 629, 722, 1267, 1435
Bso31I	GGTCTC	2 cut(s)	371, 1593
BsoBI	CYCGRG	1 cut(s)	358
Bsp1286I	GDGCHC	3 cut(s)	150, 331, 351
Bsp143I	GATC	3 cut(s)	240, 848, 910
BspANI	GGCC	6 cut(s)	453, 515, 629, 722, 1267, 1435
BspCNI	CTCAG	3 cut(s)	130, 1144, 1408
BspFNI	CGCG	1 cut(s)	233
BspLI	GGNNCC	7 cut(s)	6, 147, 172, 178, 912, 978, 1293
BspMAI	CTGCAG	1 cut(s)	1534
BspPI	GGATC	3 cut(s)	856, 905, 918
BspT107I	GGYRCC	3 cut(s)	4, 170, 1291
BspTNI	GGTCTC	2 cut(s)	371, 1593
BsrBI	CCGCTC	1 cut(s)	222
BsrFI	RCCGGY	1 cut(s)	629
BsrI	ACTGG	5 cut(s)	151, 914, 1360, 1568, 1598
BssAI	RCCGGY	1 cut(s)	629
BssECI	CCNNGG	7 cut(s)	193, 357, 358, 468, 678, 972, 1000
BssMI	GATC	3 cut(s)	240, 848, 910
BssNI	GRCGYC	2 cut(s)	5, 354
BssSI	CACGAG	1 cut(s)	612
BssT1I	CCWWGG	3 cut(s)	678, 972, 1000
Bst2BI	CACGAG	1 cut(s)	612
Bst2UI	CCWGG	2 cut(s)	963, 1029
Bst4CI	ACNGT	3 cut(s)	320, 418, 727
Bst6I	CTCTTC	1 cut(s)	1647
BstACI	GRCGYC	2 cut(s)	5, 354
BstC8I	GCNNGC	4 cut(s)	310, 437, 1053, 1437
BstDEI	CTNAG	8 cut(s)	117, 237, 410, 660, 1106, 1131, 1395, 1462
BstDSI	CCRYGG	1 cut(s)	468
BstF5I	GGATG	3 cut(s)	99, 1315, 1472
BstFNI	CGCG	1 cut(s)	233
BstH2I	RGCGCY	1 cut(s)	8
BstHHI	GCGC	3 cut(s)	7, 549, 931
BstKTI	GATC	3 cut(s)	243, 851, 913
BstMAI	GTCTC	3 cut(s)	371, 450, 1593
BstMBI	GATC	3 cut(s)	240, 848, 910
BstMCI	CGRYCG	1 cut(s)	202
BstMWI	GCNNNNNNNGC	5 cut(s)	289, 406, 797, 926, 1405
BstNI	CCWGG	2 cut(s)	963, 1029
BstNSI	RCATGY	2 cut(s)	1443, 1559
BstSCI	CCNGG	6 cut(s)	193, 357, 358, 372, 961, 1027
BstSFI	CTRYAG	1 cut(s)	1530
BstUI	CGCG	1 cut(s)	233
BstV1I	GCAGC	3 cut(s)	169, 907, 1067
BstV2I	GAAGAC	2 cut(s)	1080, 1268
BstX2I	RGATCY	2 cut(s)	240, 910
BstYI	RGATCY	2 cut(s)	240, 910
BsuRI	GGCC	6 cut(s)	453, 515, 629, 722, 1267, 1435
BtgI	CCRYGG	1 cut(s)	468
BtrI	CACGTC	1 cut(s)	835
BtsCI	GGATG	3 cut(s)	99, 1315, 1472
BtsI	GCAGTG	1 cut(s)	1065
BtsIMutI	CAGTG	5 cut(s)	723, 886, 1065, 1296, 1605
Cac8I	GCNNGC	4 cut(s)	310, 437, 1053, 1437
CaiI	CAGNNNCTG	1 cut(s)	920
CfoI	GCGC	3 cut(s)	7, 549, 931
Cfr10I	RCCGGY	1 cut(s)	629
Cfr13I	GGNCC	2 cut(s)	977, 1265
Cfr9I	CCCGGG	1 cut(s)	358
CseI	GACGC	3 cut(s)	239, 362, 1388
Csp6I	GTAC	2 cut(s)	937, 1292
CspCI	CAANNNNNGTGG	2 cut(s)	1581, 1616
CviAII	CATG	6 cut(s)	449, 457, 511, 1158, 1440, 1556
CviQI	GTAC	2 cut(s)	937, 1292
DdeI	CTNAG	8 cut(s)	117, 237, 410, 660, 1106, 1131, 1395, 1462
DinI	GGCGCC	1 cut(s)	6
DpnI	GATC	3 cut(s)	242, 850, 912
DpnII	GATC	3 cut(s)	240, 848, 910
EaeI	YGGCCR	3 cut(s)	451, 513, 627
Eam1104I	CTCTTC	1 cut(s)	1647
EarI	CTCTTC	1 cut(s)	1647
EciI	GGCGGA	2 cut(s)	917, 1322
Ecl136II	GAGCTC	1 cut(s)	329
Eco130I	CCWWGG	3 cut(s)	678, 972, 1000
Eco147I	AGGCCT	1 cut(s)	1435
Eco24I	GRGCYC	3 cut(s)	150, 331, 351
Eco31I	GGTCTC	2 cut(s)	371, 1593
Eco47I	GGWCC	1 cut(s)	977
Eco53kI	GAGCTC	1 cut(s)	329
Eco57I	CTGAAG	1 cut(s)	1262
Eco88I	CYCGRG	1 cut(s)	358
EcoICRI	GAGCTC	1 cut(s)	329
EcoRII	CCWGG	2 cut(s)	961, 1027
EcoT14I	CCWWGG	3 cut(s)	678, 972, 1000
EcoT22I	ATGCAT	1 cut(s)	388
EcoT38I	GRGCYC	3 cut(s)	150, 331, 351
EgeI	GGCGCC	1 cut(s)	6
EheI	GGCGCC	1 cut(s)	6
ErhI	CCWWGG	3 cut(s)	678, 972, 1000
FaeI	CATG	6 cut(s)	452, 460, 514, 1161, 1443, 1559
FaqI	GGGAC	3 cut(s)	697, 845, 1544
FatI	CATG	6 cut(s)	448, 456, 510, 1157, 1439, 1555
FauI	CCCGC	2 cut(s)	488, 822
FauNDI	CATATG	1 cut(s)	1287
Fnu4HI	GCNGC	8 cut(s)	180, 183, 217, 220, 234, 269, 921, 1056
FokI	GGATG	3 cut(s)	86, 1322, 1479
FriOI	GRGCYC	3 cut(s)	150, 331, 351
Fsp4HI	GCNGC	8 cut(s)	180, 183, 217, 220, 234, 269, 921, 1056
FspBI	CTAG	1 cut(s)	1001
GlaI	GCGC	3 cut(s)	6, 548, 930
GluI	GCNGC	8 cut(s)	180, 183, 217, 220, 234, 269, 921, 1056
GsuI	CTGGAG	3 cut(s)	813, 1050, 1632
HaeII	RGCGCY	1 cut(s)	8
HaeIII	GGCC	6 cut(s)	453, 515, 629, 722, 1267, 1435
HapII	CCGG	5 cut(s)	174, 195, 359, 374, 630
HgaI	GACGC	3 cut(s)	239, 362, 1388
HhaI	GCGC	3 cut(s)	7, 549, 931
Hin1I	GRCGYC	2 cut(s)	5, 354
Hin1II	CATG	6 cut(s)	452, 460, 514, 1161, 1443, 1559
Hin6I	GCGC	3 cut(s)	5, 547, 929
HinP1I	GCGC	3 cut(s)	5, 547, 929
HincII	GTYRAC	1 cut(s)	1641
HindII	GTYRAC	1 cut(s)	1641
HindIII	AAGCTT	2 cut(s)	290, 737
HinfI	GANTC	8 cut(s)	111, 637, 808, 1273, 1282, 1386, 1391, 1511
HpaII	CCGG	5 cut(s)	174, 195, 359, 374, 630
HphI	GGTGA	3 cut(s)	31, 716, 1028
Hpy166II	GTNNAC	3 cut(s)	589, 1036, 1641
Hpy188III	TCNNGA	5 cut(s)	527, 1143, 1228, 1611, 1634
Hpy8I	GTNNAC	3 cut(s)	589, 1036, 1641
Hpy99I	CGWCG	3 cut(s)	233, 308, 356
HpyAV	CCTTC	9 cut(s)	34, 46, 52, 161, 235, 423, 817, 1092, 1225
HpyCH4III	ACNGT	3 cut(s)	320, 418, 727
HpyCH4IV	ACGT	2 cut(s)	834, 1249
HpyF10VI	GCNNNNNNNGC	5 cut(s)	289, 406, 797, 926, 1405
HpyF3I	CTNAG	8 cut(s)	117, 237, 410, 660, 1106, 1131, 1395, 1462
HpySE526I	ACGT	2 cut(s)	834, 1249
Hsp92I	GRCGYC	2 cut(s)	5, 354
Hsp92II	CATG	6 cut(s)	452, 460, 514, 1161, 1443, 1559
HspAI	GCGC	3 cut(s)	5, 547, 929
KasI	GGCGCC	1 cut(s)	4
KpnI	GGTACC	1 cut(s)	1295
Kzo9I	GATC	3 cut(s)	240, 848, 910
LmnI	GCTCC	9 cut(s)	69, 145, 176, 227, 326, 334, 444, 1096, 1613
Lsp1109I	GCAGC	3 cut(s)	169, 907, 1067
LweI	GCATC	3 cut(s)	809, 932, 1485
MaeI	CTAG	1 cut(s)	1001
MaeII	ACGT	2 cut(s)	834, 1249
MaeIII	GTNAC	3 cut(s)	153, 314, 333
MalI	GATC	3 cut(s)	242, 850, 912
MbiI	CCGCTC	1 cut(s)	222
MboI	GATC	3 cut(s)	240, 848, 910
MfeI	CAATTG	1 cut(s)	1403
MflI	RGATCY	2 cut(s)	240, 910
MhlI	GDGCHC	3 cut(s)	150, 331, 351
MlsI	TGGCCA	1 cut(s)	453
MluCI	AATT	9 cut(s)	572, 694, 981, 1013, 1126, 1168, 1313, 1403, 1516
MluNI	TGGCCA	1 cut(s)	453
Mly113I	GGCGCC	1 cut(s)	5
MlyI	GAGTC	3 cut(s)	1282, 1380, 1385
MmeI	TCCRAC	4 cut(s)	393, 763, 1312, 1376
Mox20I	TGGCCA	1 cut(s)	453
Mph1103I	ATGCAT	1 cut(s)	388
MroXI	GAANNNNTTC	2 cut(s)	503, 522
MscI	TGGCCA	1 cut(s)	453
MseI	TTAA	4 cut(s)	570, 693, 741, 1253
Msp20I	TGGCCA	1 cut(s)	453
MspA1I	CMGCKG	1 cut(s)	182
MspI	CCGG	5 cut(s)	174, 195, 359, 374, 630
MspR9I	CCNGG	6 cut(s)	195, 359, 360, 374, 963, 1029
MunI	CAATTG	1 cut(s)	1403
MvaI	CCWGG	2 cut(s)	963, 1029
MvnI	CGCG	1 cut(s)	233
MwoI	GCNNNNNNNGC	5 cut(s)	289, 406, 797, 926, 1405
NarI	GGCGCC	1 cut(s)	5
NciI	CCSGG	4 cut(s)	195, 359, 360, 374
NdeI	CATATG	1 cut(s)	1287
NdeII	GATC	3 cut(s)	240, 848, 910
NlaIII	CATG	6 cut(s)	452, 460, 514, 1161, 1443, 1559
NlaIV	GGNNCC	7 cut(s)	6, 147, 172, 178, 912, 978, 1293
NsiI	ATGCAT	1 cut(s)	388
NspI	RCATGY	2 cut(s)	1443, 1559
PceI	AGGCCT	1 cut(s)	1435
PdmI	GAANNNNTTC	2 cut(s)	503, 522
PfeI	GAWTC	5 cut(s)	111, 637, 808, 1282, 1511
PfoI	TCCNGGA	1 cut(s)	961
PkrI	GCNGC	8 cut(s)	181, 184, 218, 221, 235, 270, 922, 1057
PleI	GAGTC	3 cut(s)	1281, 1380, 1385
PluTI	GGCGCC	1 cut(s)	8
PpsI	GAGTC	3 cut(s)	1281, 1380, 1385
Psp124BI	GAGCTC	1 cut(s)	331
Psp6I	CCWGG	2 cut(s)	961, 1027
PspGI	CCWGG	2 cut(s)	961, 1027
PspN4I	GGNNCC	7 cut(s)	6, 147, 172, 178, 912, 978, 1293
PspPI	GGNCC	2 cut(s)	977, 1265
PstI	CTGCAG	1 cut(s)	1534
PstNI	CAGNNNCTG	1 cut(s)	920
PsuI	RGATCY	2 cut(s)	240, 910
RsaI	GTAC	2 cut(s)	938, 1293
RsaNI	GTAC	2 cut(s)	937, 1292
SacI	GAGCTC	1 cut(s)	331
SaqAI	TTAA	4 cut(s)	570, 693, 741, 1253
SatI	GCNGC	8 cut(s)	180, 183, 217, 220, 234, 269, 921, 1056
Sau3AI	GATC	3 cut(s)	240, 848, 910
Sau96I	GGNCC	2 cut(s)	977, 1265
SchI	GAGTC	3 cut(s)	1282, 1380, 1385
ScrFI	CCNGG	6 cut(s)	195, 359, 360, 374, 963, 1029
SduI	GDGCHC	3 cut(s)	150, 331, 351
SfaNI	GCATC	3 cut(s)	809, 932, 1485
SfcI	CTRYAG	1 cut(s)	1530
SfoI	GGCGCC	1 cut(s)	6
SinI	GGWCC	1 cut(s)	977
SmaI	CCCGGG	1 cut(s)	360
SmlI	CTYRAG	1 cut(s)	248
SmoI	CTYRAG	1 cut(s)	248
Sse9I	AATT	9 cut(s)	572, 694, 981, 1013, 1126, 1168, 1313, 1403, 1516
SseBI	AGGCCT	1 cut(s)	1435
SspDI	GGCGCC	1 cut(s)	4
SspI	AATATT	3 cut(s)	648, 1197, 1578
SspMI	CTAG	1 cut(s)	1001
SstI	GAGCTC	1 cut(s)	331
StuI	AGGCCT	1 cut(s)	1435
StyD4I	CCNGG	6 cut(s)	193, 357, 358, 372, 961, 1027
StyI	CCWWGG	3 cut(s)	678, 972, 1000
TaaI	ACNGT	3 cut(s)	320, 418, 727
TaiI	ACGT	2 cut(s)	837, 1252
TaqI	TCGA	5 cut(s)	210, 228, 1389, 1479, 1572
TaqII	GACCGA	1 cut(s)	1658
TasI	AATT	9 cut(s)	572, 694, 981, 1013, 1126, 1168, 1313, 1403, 1516
TatI	WGTACW	1 cut(s)	936
TauI	GCSGC	5 cut(s)	182, 219, 222, 236, 271
TfiI	GAWTC	5 cut(s)	111, 637, 808, 1282, 1511
Tru1I	TTAA	4 cut(s)	570, 693, 741, 1253
Tru9I	TTAA	4 cut(s)	570, 693, 741, 1253
TscAI	CASTG	5 cut(s)	730, 886, 1065, 1303, 1605
TseI	GCWGC	3 cut(s)	182, 920, 1055
TspDTI	ATGAA	7 cut(s)	496, 746, 865, 1055, 1274, 1326, 1389
TspGWI	ACGGA	1 cut(s)	321
TspMI	CCCGGG	1 cut(s)	358
TspRI	CASTG	5 cut(s)	730, 886, 1065, 1303, 1605
VpaK11BI	GGWCC	1 cut(s)	977
XapI	RAATTY	2 cut(s)	1313, 1516
XceI	RCATGY	2 cut(s)	1443, 1559
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1328
XmaI	CCCGGG	1 cut(s)	358
XmaJI	CCTAGG	1 cut(s)	1000
XmnI	GAANNNNTTC	2 cut(s)	503, 522
XspI	CTAG	1 cut(s)	1001
Zsp2I	ATGCAT	1 cut(s)	388

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.