Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0007878

Physical Location & Seq

Genomic Coordinates Forward (+)

5527529 .. 5531581

Gene Structure 4053 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00283640.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1677 bp

ATGGCGCCTAAAACCTTCTCCTCCTTCCTTTCTCCCTTCACCTTCACACTCCCCAACCCCAAGCTCCTCAACCTCCACACCAACCCCACTCTCATCCTCTGTCGATTCTCTCAGCCCCACCAGAAACCACCCCTCTCGGAGCCCCAGTTACCCCAACCCGAAGGCACTGGAGCCGCCGCACCCACCCCCGGCGACCGCTTCCTCGAAAGCCGCCGCTCCTTCGACGAGGCTAAGCTCTTGCTCAAGGAAAAGAAGAAGAAGCGGCTCAAAGAGAAGCCCTTGAAGCTTTCCACTGCCGTCGCTTGCTGTTACGGTTGCGGAGCTCCGTTACAGACTTCCGAGCCCGACGCCCCGGGTTATTCCGACCCGGAGACCTATGCAGTGAAGAAGAAGCACCACCAGCTTAGAACTGTTATATGTGGAAGGTGCAAGCTTTTGTCCCATGGCCACATGATAACTGCTGTGGGTGGGAATGGTGGTTATTCTGGCGGGAAGCAGTTCATCATGGCGGAACAGCTTCGGGAGAAGCTCTCGCATTTGCGCTACGAGAGAGCGTTGATAGTTAAATTGGTTGATATTGTGGACTTCAATGGTAGCTTTTTGGCTCGTGTGCGTGATTTGGCTGGTGCGAATCCCATAATATTAGTCATTACTAAGGTTGATTTACTTCCCAAGGGGACTGATTTTAATTGTATTGGTGATTGGGTTGTGGAGGCCACCGTAAAGAAGAAGCTTAATGTTATGAGCGTTCATCTGACGAGTTCAAAGTCTTTGGTTGGAGTAGCTGGAGTTGCATCAGAGATTCAAAAGGAGAAGAAGGGGAGGGACGTGTATGTTATGGGGTCGGCAAATGTTGGGAAATCAGCTTTCATCAGTGCTTTACTGAAACTGATGGCGGAAAAGGATCCAGTTGCTGCATCAGCGCAGAAGTACAAACCAATACAATCTGCTGTTCCTGGAACTACCTTGGGTCCAATTCAAATAAATGCTTTCCTAGGAGGAGGGAAATTATATGATACACCTGGAGTTCACCTCCACCATAGGCAAGCAGCAGTGGTTCATTCAGAAGACCTACCTGCCCTTGCTCCTCAAAGTCGGCTTAGGGGTCAATCTTTGCCTAATTCTCAGGTTTCCTCTGGAAATATAACAACATGGAAAGGCAATTCTAATGATTTGAATGGCTATTCAATATTCTGGGGAGGTCTTGTCAGAGTAGATGTCTTGAAGGTTCTCCCTGAAACACGTTTAACATTTTATGGGCCGAAGAGTCTTCAGATTCATATGGTACCCACTGATGAGGCGGATGAATTTTACCAGAAACAAGTTGGAGTTTTATTGACACCTCCAACTGGGAAAGAAAGGGCAGATGAATGGAGAGGACTCGACTCTCAGCGTAAATTGCAGATAAAAGTTGAAGATGTGCAAAGGCCTGCATGTGATGTGGCTATATCAGGCTTAGGATGGATTAGCATCGAACCTATTTGCAGATTATTGAGAAGTTCTGATTCAAATTCAGAAAAAACTGCAGGGGAACTGCATTTAGCTGTGCATGTGCCCAAGCCAGTCGAAATATTTGTTAGGTCTCCAATCCCAGTGGGCAAGTCTGGAGCAGAGTGGTATCAGTATCGGGAGTTGACCGAAAAGGAAGAGGAAGAAAGACCAAAATGGCATTATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0001101 GO:0001505 GO:0003674 GO:0003824 GO:0003924 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006109 GO:0006807 GO:0006809 GO:0006950 GO:0006970 GO:0006979 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009507 GO:0009536 GO:0009628 GO:0009651 GO:0009657 GO:0009668 GO:0009889 GO:0009987 GO:0010027 GO:0010035 GO:0010193 GO:0010322 GO:0010565 GO:0010675 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017111 GO:0017144 GO:0019216 GO:0019220 GO:0019222 GO:0019747 GO:0022613 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0034641 GO:0042133 GO:0042136 GO:0042221 GO:0042254 GO:0042493 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044085 GO:0044237 GO:0044249 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0046209 GO:0046677 GO:0046890 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051174 GO:0051246 GO:0060255 GO:0061024 GO:0062012 GO:0065007 GO:0065008 GO:0071071 GO:0071840 GO:0072593 GO:0080090 GO:0099402 GO:1901700 GO:1903409 GO:1903725 GO:2001057

KEGG Pathways

Metabolic & Signaling

ko00220 ko00330 ko01100 ko01110 ko01130 ko04626 map00220 map00330 map01100 map01110 map01130 map04626

Pfam Domains

Protein Families

MMR_HSR1

Protein Analysis

558

Amino Acids

61.38

Weight (kDa)

9.3

Isoelectric Point (pI)

40.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MMR_HSR1	PF01926	277 - 347	9.3e-07	50S ribosome-binding GTPase
YqeH-like_C	PF21516	415 - 492	7.1e-11	YqeH-like, C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007878)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G47450 AT3G47450
fragaria_vesca	FvH4_7g25681 FvH4_7g27380 FvH4_7g27380 FvH4_7g28391
malus_domestica	MD07G1252900.v1.1
prunus_persica	Prupe.2G276500_v2.0.a1
pyrus_communis	pycom07g22550
rosa_chinensis	RchiOBHm_Chr1g0374211
rosa_laevigata	RLG00000026755
rosa_multiflora	Rmu_co8240197.1_g000001 Rmu_ssc0000007.1_g000041 Rmu_ssc0000450.1_g000005
rosa_roxburghii	Rroxscaffold_3G00227680 Rroxscaffold_4G00283640 Rroxscaffold_7G00194520
rosa_rugosa	Rorug01G0381400 Rorug01G0381500
rosa_samantha	Rh1AG392400 Rh1BG356400 Rh1CG369400 Rh1DG386900
rosa_wichuraiana	Rw1G034330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1084
Acc65I	GGTACC	1 cut(s)	1285
AccB1I	GGYRCC	2 cut(s)	4, 1285
AccBSI	CCGCTC	1 cut(s)	216
AclWI	GGATC	2 cut(s)	899, 912
AcoI	YGGCCR	1 cut(s)	445
AcsI	RAATTY	2 cut(s)	1307, 1510
AcuI	CTGAAG	1 cut(s)	1256
AcyI	GRCGYC	2 cut(s)	5, 348
AfaI	GTAC	2 cut(s)	932, 1287
AfiI	CCNNNNNNNGG	2 cut(s)	188, 1349
AflIII	ACRYGT	2 cut(s)	828, 1241
AjiI	CACGTC	1 cut(s)	829
AjnI	CCWGG	2 cut(s)	955, 1021
Alw21I	GWGCWC	1 cut(s)	325
Alw26I	GTCTC	2 cut(s)	365, 1587
AlwI	GGATC	2 cut(s)	899, 912
AlwNI	CAGNNNCTG	1 cut(s)	914
Ama87I	CYCGRG	1 cut(s)	352
AoxI	GGCC	4 cut(s)	445, 714, 1259, 1427
ApeKI	GCWGC	2 cut(s)	914, 1049
ApoI	RAATTY	2 cut(s)	1307, 1510
Asp700I	GAANNNNTTC	2 cut(s)	497, 516
Asp718I	GGTACC	1 cut(s)	1285
AspA2I	CCTAGG	1 cut(s)	994
AspLEI	GCGC	3 cut(s)	7, 543, 925
AspS9I	GGNCC	2 cut(s)	971, 1259
AsuC2I	CCSGG	4 cut(s)	189, 353, 354, 368
AsuHPI	GGTGA	3 cut(s)	31, 710, 1022
AvaI	CYCGRG	1 cut(s)	352
AvaII	GGWCC	1 cut(s)	971
AvrII	CCTAGG	1 cut(s)	994
BaeGI	GKGCMC	1 cut(s)	1557
BalI	TGGCCA	1 cut(s)	447
BamHI	GGATCC	1 cut(s)	904
BanI	GGYRCC	2 cut(s)	4, 1285
BanII	GRGCYC	3 cut(s)	144, 325, 345
BauI	CACGAG	1 cut(s)	606
BbsI	GAAGAC	2 cut(s)	1074, 1262
Bbv12I	GWGCWC	1 cut(s)	325
BbvI	GCAGC	2 cut(s)	901, 1061
BccI	CCATC	2 cut(s)	886, 1455
BceAI	ACGGC	1 cut(s)	281
BciT130I	CCWGG	2 cut(s)	957, 1023
BcnI	CCSGG	4 cut(s)	189, 353, 354, 368
BcoDI	GTCTC	2 cut(s)	365, 1587
BfaI	CTAG	1 cut(s)	995
BfmI	CTRYAG	1 cut(s)	1524
BfoI	RGCGCY	1 cut(s)	8
BfuAI	ACCTGC	1 cut(s)	1084
BisI	GCNGC	7 cut(s)	174, 177, 211, 214, 263, 915, 1050
BlnI	CCTAGG	1 cut(s)	994
BlpI	GCTNAGC	1 cut(s)	231
BlsI	GCNGC	7 cut(s)	175, 178, 212, 215, 264, 916, 1051
Bme1390I	CCNGG	6 cut(s)	189, 353, 354, 368, 957, 1023
Bme18I	GGWCC	1 cut(s)	971
BmeT110I	CYCGRG	1 cut(s)	352
BmgBI	CACGTC	1 cut(s)	829
BmgT120I	GGNCC	2 cut(s)	971, 1259
BmiI	GGNNCC	6 cut(s)	6, 141, 172, 906, 972, 1287
BmrFI	CCNGG	6 cut(s)	189, 353, 354, 368, 957, 1023
BmrI	ACTGGG	3 cut(s)	139, 1359, 1586
BmsI	GCATC	3 cut(s)	803, 926, 1479
BmuI	ACTGGG	3 cut(s)	139, 1359, 1586
BpiI	GAAGAC	2 cut(s)	1074, 1262
BplI	GAGNNNNNCTC	4 cut(s)	515, 547, 1017, 1049
BpmI	CTGGAG	4 cut(s)	189, 807, 1044, 1626
Bpu10I	CCTNAGC	2 cut(s)	1100, 1456
Bpu1102I	GCTNAGC	1 cut(s)	231
BpuEI	CTTGAG	1 cut(s)	227
BpuMI	CCSGG	4 cut(s)	189, 353, 354, 368
BsaBI	GATNNNNATC	1 cut(s)	1469
BsaHI	GRCGYC	2 cut(s)	5, 348
BsaI	GGTCTC	2 cut(s)	365, 1587
BsaJI	CCNNGG	7 cut(s)	187, 351, 352, 442, 672, 966, 994
BsaXI	ACNNNNNCTCC	4 cut(s)	131, 161, 1191, 1221
Bsc4I	CCNNNNNNNGG	2 cut(s)	188, 1349
Bse1I	ACTGG	6 cut(s)	145, 172, 908, 1354, 1562, 1592
Bse8I	GATNNNNATC	1 cut(s)	1469
BseBI	CCWGG	2 cut(s)	957, 1023
BseDI	CCNNGG	7 cut(s)	187, 351, 352, 442, 672, 966, 994
BseGI	GGATG	3 cut(s)	93, 1309, 1466
BseJI	GATNNNNATC	1 cut(s)	1469
BseLI	CCNNNNNNNGG	2 cut(s)	188, 1349
BseMII	CTCAG	3 cut(s)	125, 1139, 1403
BseNI	ACTGG	6 cut(s)	145, 172, 908, 1354, 1562, 1592
BseRI	GAGGAG	4 cut(s)	10, 56, 1014, 1077
BseSI	GKGCMC	1 cut(s)	1557
BseXI	GCAGC	2 cut(s)	901, 1061
Bsh1285I	CGRYCG	1 cut(s)	196
BshFI	GGCC	4 cut(s)	447, 716, 1261, 1429
BshNI	GGYRCC	2 cut(s)	4, 1285
BsiEI	CGRYCG	1 cut(s)	196
BsiHKAI	GWGCWC	1 cut(s)	325
BsiHKCI	CYCGRG	1 cut(s)	352
BsiSI	CCGG	3 cut(s)	189, 353, 368
BslFI	GGGAC	3 cut(s)	424, 691, 839
BslI	CCNNNNNNNGG	2 cut(s)	188, 1349
BsmAI	GTCTC	2 cut(s)	365, 1587
BsmFI	GGGAC	3 cut(s)	424, 691, 839
BsnI	GGCC	4 cut(s)	447, 716, 1261, 1429
Bso31I	GGTCTC	2 cut(s)	365, 1587
BsoBI	CYCGRG	1 cut(s)	352
Bsp1286I	GDGCHC	4 cut(s)	144, 325, 345, 1557
Bsp143I	GATC	1 cut(s)	904
Bsp1720I	GCTNAGC	1 cut(s)	231
Bsp19I	CCATGG	1 cut(s)	442
BspANI	GGCC	4 cut(s)	447, 716, 1261, 1429
BspCNI	CTCAG	3 cut(s)	124, 1138, 1402
BspLI	GGNNCC	6 cut(s)	6, 141, 172, 906, 972, 1287
BspMAI	CTGCAG	1 cut(s)	1528
BspMI	ACCTGC	1 cut(s)	1084
BspPI	GGATC	2 cut(s)	899, 912
BspT107I	GGYRCC	2 cut(s)	4, 1285
BspTNI	GGTCTC	2 cut(s)	365, 1587
BsrBI	CCGCTC	1 cut(s)	216
BsrI	ACTGG	6 cut(s)	145, 172, 908, 1354, 1562, 1592
BssECI	CCNNGG	7 cut(s)	187, 351, 352, 442, 672, 966, 994
BssMI	GATC	1 cut(s)	904
BssNI	GRCGYC	2 cut(s)	5, 348
BssSI	CACGAG	1 cut(s)	606
BssT1I	CCWWGG	4 cut(s)	442, 672, 966, 994
Bst2BI	CACGAG	1 cut(s)	606
Bst2UI	CCWGG	2 cut(s)	957, 1023
Bst4CI	ACNGT	3 cut(s)	314, 412, 721
Bst6I	CTCTTC	2 cut(s)	1259, 1641
BstACI	GRCGYC	2 cut(s)	5, 348
BstC8I	GCNNGC	4 cut(s)	304, 431, 1047, 1431
BstDEI	CTNAG	8 cut(s)	111, 231, 404, 654, 1100, 1125, 1389, 1456
BstDSI	CCRYGG	1 cut(s)	442
BstF5I	GGATG	3 cut(s)	93, 1309, 1466
BstH2I	RGCGCY	1 cut(s)	8
BstHHI	GCGC	3 cut(s)	7, 543, 925
BstKTI	GATC	1 cut(s)	907
BstMAI	GTCTC	2 cut(s)	365, 1587
BstMBI	GATC	1 cut(s)	904
BstMCI	CGRYCG	1 cut(s)	196
BstMWI	GCNNNNNNNGC	5 cut(s)	283, 400, 791, 920, 1399
BstNI	CCWGG	2 cut(s)	957, 1023
BstNSI	RCATGY	2 cut(s)	1437, 1553
BstSCI	CCNGG	6 cut(s)	187, 351, 352, 366, 955, 1021
BstSFI	CTRYAG	1 cut(s)	1524
BstSLI	GKGCMC	1 cut(s)	1557
BstV1I	GCAGC	2 cut(s)	901, 1061
BstV2I	GAAGAC	2 cut(s)	1074, 1262
BstX2I	RGATCY	1 cut(s)	904
BstYI	RGATCY	1 cut(s)	904
BsuRI	GGCC	4 cut(s)	447, 716, 1261, 1429
BtgI	CCRYGG	1 cut(s)	442
BtrI	CACGTC	1 cut(s)	829
BtsCI	GGATG	3 cut(s)	93, 1309, 1466
BtsI	GCAGTG	3 cut(s)	291, 387, 1059
BtsIMutI	CAGTG	7 cut(s)	165, 291, 387, 880, 1059, 1290, 1599
BveI	ACCTGC	1 cut(s)	1084
Cac8I	GCNNGC	4 cut(s)	304, 431, 1047, 1431
CaiI	CAGNNNCTG	1 cut(s)	914
CfoI	GCGC	3 cut(s)	7, 543, 925
Cfr13I	GGNCC	2 cut(s)	971, 1259
Cfr9I	CCCGGG	1 cut(s)	352
CseI	GACGC	1 cut(s)	356
Csp6I	GTAC	2 cut(s)	931, 1286
CspCI	CAANNNNNGTGG	2 cut(s)	1575, 1610
CviAII	CATG	6 cut(s)	443, 451, 505, 1152, 1434, 1550
CviQI	GTAC	2 cut(s)	931, 1286
DdeI	CTNAG	8 cut(s)	111, 231, 404, 654, 1100, 1125, 1389, 1456
DinI	GGCGCC	1 cut(s)	6
DpnI	GATC	1 cut(s)	906
DpnII	GATC	1 cut(s)	904
EaeI	YGGCCR	1 cut(s)	445
Eam1104I	CTCTTC	2 cut(s)	1259, 1641
EarI	CTCTTC	2 cut(s)	1259, 1641
EciI	GGCGGA	3 cut(s)	524, 911, 1316
Ecl136II	GAGCTC	1 cut(s)	323
Eco130I	CCWWGG	4 cut(s)	442, 672, 966, 994
Eco147I	AGGCCT	1 cut(s)	1429
Eco24I	GRGCYC	3 cut(s)	144, 325, 345
Eco31I	GGTCTC	2 cut(s)	365, 1587
Eco47I	GGWCC	1 cut(s)	971
Eco53kI	GAGCTC	1 cut(s)	323
Eco57I	CTGAAG	1 cut(s)	1256
Eco88I	CYCGRG	1 cut(s)	352
EcoICRI	GAGCTC	1 cut(s)	323
EcoRII	CCWGG	2 cut(s)	955, 1021
EcoT14I	CCWWGG	4 cut(s)	442, 672, 966, 994
EcoT38I	GRGCYC	3 cut(s)	144, 325, 345
EgeI	GGCGCC	1 cut(s)	6
EheI	GGCGCC	1 cut(s)	6
ErhI	CCWWGG	4 cut(s)	442, 672, 966, 994
FaeI	CATG	6 cut(s)	446, 454, 508, 1155, 1437, 1553
FaqI	GGGAC	3 cut(s)	424, 691, 839
FatI	CATG	6 cut(s)	442, 450, 504, 1151, 1433, 1549
FauI	CCCGC	1 cut(s)	482
FauNDI	CATATG	1 cut(s)	1281
Fnu4HI	GCNGC	7 cut(s)	174, 177, 211, 214, 263, 915, 1050
FokI	GGATG	3 cut(s)	80, 1316, 1473
FriOI	GRGCYC	3 cut(s)	144, 325, 345
Fsp4HI	GCNGC	7 cut(s)	174, 177, 211, 214, 263, 915, 1050
FspBI	CTAG	1 cut(s)	995
GlaI	GCGC	3 cut(s)	6, 542, 924
GluI	GCNGC	7 cut(s)	174, 177, 211, 214, 263, 915, 1050
GsuI	CTGGAG	4 cut(s)	189, 807, 1044, 1626
HaeII	RGCGCY	1 cut(s)	8
HaeIII	GGCC	4 cut(s)	447, 716, 1261, 1429
HapII	CCGG	3 cut(s)	189, 353, 368
HgaI	GACGC	1 cut(s)	356
HhaI	GCGC	3 cut(s)	7, 543, 925
Hin1I	GRCGYC	2 cut(s)	5, 348
Hin1II	CATG	6 cut(s)	446, 454, 508, 1155, 1437, 1553
Hin6I	GCGC	3 cut(s)	5, 541, 923
HinP1I	GCGC	3 cut(s)	5, 541, 923
HincII	GTYRAC	1 cut(s)	1635
HindII	GTYRAC	1 cut(s)	1635
HindIII	AAGCTT	3 cut(s)	284, 431, 731
HinfI	GANTC	8 cut(s)	105, 631, 802, 1267, 1276, 1380, 1385, 1505
HpaII	CCGG	3 cut(s)	189, 353, 368
HphI	GGTGA	3 cut(s)	31, 710, 1022
Hpy166II	GTNNAC	3 cut(s)	583, 1030, 1635
Hpy188III	TCNNGA	5 cut(s)	521, 1137, 1222, 1605, 1628
Hpy8I	GTNNAC	3 cut(s)	583, 1030, 1635
Hpy99I	CGWCG	3 cut(s)	227, 302, 350
HpyAV	CCTTC	9 cut(s)	25, 34, 46, 52, 155, 229, 417, 811, 1219
HpyCH4III	ACNGT	3 cut(s)	314, 412, 721
HpyCH4IV	ACGT	2 cut(s)	828, 1243
HpyF10VI	GCNNNNNNNGC	5 cut(s)	283, 400, 791, 920, 1399
HpyF3I	CTNAG	8 cut(s)	111, 231, 404, 654, 1100, 1125, 1389, 1456
HpySE526I	ACGT	2 cut(s)	828, 1243
Hsp92I	GRCGYC	2 cut(s)	5, 348
Hsp92II	CATG	6 cut(s)	446, 454, 508, 1155, 1437, 1553
HspAI	GCGC	3 cut(s)	5, 541, 923
KasI	GGCGCC	1 cut(s)	4
KpnI	GGTACC	1 cut(s)	1289
Kzo9I	GATC	1 cut(s)	904
LmnI	GCTCC	8 cut(s)	69, 139, 170, 221, 320, 328, 1090, 1607
Lsp1109I	GCAGC	2 cut(s)	901, 1061
LweI	GCATC	3 cut(s)	803, 926, 1479
MaeI	CTAG	1 cut(s)	995
MaeII	ACGT	2 cut(s)	828, 1243
MaeIII	GTNAC	3 cut(s)	147, 308, 327
MalI	GATC	1 cut(s)	906
MbiI	CCGCTC	1 cut(s)	216
MboI	GATC	1 cut(s)	904
MflI	RGATCY	1 cut(s)	904
MhlI	GDGCHC	4 cut(s)	144, 325, 345, 1557
MlsI	TGGCCA	1 cut(s)	447
MluCI	AATT	9 cut(s)	566, 688, 975, 1007, 1120, 1162, 1307, 1397, 1510
MluNI	TGGCCA	1 cut(s)	447
Mly113I	GGCGCC	1 cut(s)	5
MlyI	GAGTC	3 cut(s)	1276, 1374, 1379
MmeI	TCCRAC	4 cut(s)	387, 757, 1306, 1370
Mox20I	TGGCCA	1 cut(s)	447
MroXI	GAANNNNTTC	2 cut(s)	497, 516
MscI	TGGCCA	1 cut(s)	447
MseI	TTAA	4 cut(s)	564, 687, 735, 1247
Msp20I	TGGCCA	1 cut(s)	447
MspI	CCGG	3 cut(s)	189, 353, 368
MspR9I	CCNGG	6 cut(s)	189, 353, 354, 368, 957, 1023
MvaI	CCWGG	2 cut(s)	957, 1023
MwoI	GCNNNNNNNGC	5 cut(s)	283, 400, 791, 920, 1399
NarI	GGCGCC	1 cut(s)	5
NciI	CCSGG	4 cut(s)	189, 353, 354, 368
NcoI	CCATGG	1 cut(s)	442
NdeI	CATATG	1 cut(s)	1281
NdeII	GATC	1 cut(s)	904
NlaIII	CATG	6 cut(s)	446, 454, 508, 1155, 1437, 1553
NlaIV	GGNNCC	6 cut(s)	6, 141, 172, 906, 972, 1287
NspI	RCATGY	2 cut(s)	1437, 1553
PceI	AGGCCT	1 cut(s)	1429
PdmI	GAANNNNTTC	2 cut(s)	497, 516
PfeI	GAWTC	5 cut(s)	105, 631, 802, 1276, 1505
PfoI	TCCNGGA	1 cut(s)	955
PkrI	GCNGC	7 cut(s)	175, 178, 212, 215, 264, 916, 1051
PleI	GAGTC	3 cut(s)	1275, 1374, 1379
PluTI	GGCGCC	1 cut(s)	8
PpsI	GAGTC	3 cut(s)	1275, 1374, 1379
Psp124BI	GAGCTC	1 cut(s)	325
Psp6I	CCWGG	2 cut(s)	955, 1021
PspGI	CCWGG	2 cut(s)	955, 1021
PspN4I	GGNNCC	6 cut(s)	6, 141, 172, 906, 972, 1287
PspPI	GGNCC	2 cut(s)	971, 1259
PstI	CTGCAG	1 cut(s)	1528
PstNI	CAGNNNCTG	1 cut(s)	914
PsuI	RGATCY	1 cut(s)	904
RsaI	GTAC	2 cut(s)	932, 1287
RsaNI	GTAC	2 cut(s)	931, 1286
SacI	GAGCTC	1 cut(s)	325
SaqAI	TTAA	4 cut(s)	564, 687, 735, 1247
SatI	GCNGC	7 cut(s)	174, 177, 211, 214, 263, 915, 1050
Sau3AI	GATC	1 cut(s)	904
Sau96I	GGNCC	2 cut(s)	971, 1259
SchI	GAGTC	3 cut(s)	1276, 1374, 1379
ScrFI	CCNGG	6 cut(s)	189, 353, 354, 368, 957, 1023
SduI	GDGCHC	4 cut(s)	144, 325, 345, 1557
SfaNI	GCATC	3 cut(s)	803, 926, 1479
SfcI	CTRYAG	1 cut(s)	1524
SfoI	GGCGCC	1 cut(s)	6
SinI	GGWCC	1 cut(s)	971
SmaI	CCCGGG	1 cut(s)	354
SmlI	CTYRAG	1 cut(s)	242
SmoI	CTYRAG	1 cut(s)	242
Sse9I	AATT	9 cut(s)	566, 688, 975, 1007, 1120, 1162, 1307, 1397, 1510
SseBI	AGGCCT	1 cut(s)	1429
SspDI	GGCGCC	1 cut(s)	4
SspI	AATATT	3 cut(s)	642, 1191, 1572
SspMI	CTAG	1 cut(s)	995
SstI	GAGCTC	1 cut(s)	325
StuI	AGGCCT	1 cut(s)	1429
StyD4I	CCNGG	6 cut(s)	187, 351, 352, 366, 955, 1021
StyI	CCWWGG	4 cut(s)	442, 672, 966, 994
TaaI	ACNGT	3 cut(s)	314, 412, 721
TaiI	ACGT	2 cut(s)	831, 1246
TaqI	TCGA	6 cut(s)	103, 204, 222, 1383, 1473, 1566
TaqII	GACCGA	1 cut(s)	1652
TasI	AATT	9 cut(s)	566, 688, 975, 1007, 1120, 1162, 1307, 1397, 1510
TatI	WGTACW	1 cut(s)	930
TauI	GCSGC	5 cut(s)	176, 179, 213, 216, 265
TfiI	GAWTC	5 cut(s)	105, 631, 802, 1276, 1505
Tru1I	TTAA	4 cut(s)	564, 687, 735, 1247
Tru9I	TTAA	4 cut(s)	564, 687, 735, 1247
TscAI	CASTG	7 cut(s)	172, 298, 387, 880, 1059, 1297, 1599
TseI	GCWGC	2 cut(s)	914, 1049
TspDTI	ATGAA	7 cut(s)	490, 740, 859, 1049, 1268, 1320, 1383
TspGWI	ACGGA	1 cut(s)	315
TspMI	CCCGGG	1 cut(s)	352
TspRI	CASTG	7 cut(s)	172, 298, 387, 880, 1059, 1297, 1599
VpaK11BI	GGWCC	1 cut(s)	971
XapI	RAATTY	2 cut(s)	1307, 1510
XceI	RCATGY	2 cut(s)	1437, 1553
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1322
XmaI	CCCGGG	1 cut(s)	352
XmaJI	CCTAGG	1 cut(s)	994
XmnI	GAANNNNTTC	2 cut(s)	497, 516
XspI	CTAG	1 cut(s)	995

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.