Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb7

Orthogroup ID

OG0004666

Physical Location & Seq

Genomic Coordinates Reverse (-)

21906959 .. 21919800

Gene Structure 12842 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_7g29950.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3048 bp

ATGGCAATGGCTTCTTCTGTCAAAGTGGTTCTAGGCTCCATTGCCTTTGCAATCTTCTGGATGTTGGCGGTGTTTCCAGCTGTCCCTTTTCTTCCCATTGGGAGGACAGCAGGGTCTCTTTTAGGGGCAATGCTGATGGTTGTGTTCCGAGTCCTAACTCCGGATCAAGCCTATGCTGCTATTGATCTCCCAATTCTTGGCCTTTTGTTTGGGACAATGGTTGTAAGTATATATCTTGAAAGAGCAGATATGTTTAAGTATTTGGGGAAGTTGCTCTTATGGAAAAGCCAAGGAGCAAAGGACTTGATATGTAGGGTCTGTTTGATTTCTGCCATTTCAAGTGCTCTTTTCACCAATGACACCTCTTGTGTGGTTTTGACTGAGTTTGTACTAAAAGTTGCAAGACAACATAACTTACCGCCTCATCCATTCCTGCTTGCACTTGCTTCCAGTGCAAATATTGGGTCTGCAGCTACCCCAATTGGCAATCCTCAAAACCTGGTTATAGCTGTTCAGAGTAACATTCCTTTTGGAAAGTTTGTTGTAGGAATTTTCCCTGCAATGCTTGTAGGAGTTTGTGTGAATGCTTTACTTCTTTTGTGTATGTACTGGAAGTTGTTGTCTATCCAGAAGGATGTGGAAGATGCAACTGGAGATGTTGTCGCGGAGGAGGATGTGAGTTCTCATCGGTTTTCACCAGCCACACTATCACATTGTGCATCCTTCAACTCTGAGGAGCTGAACTCTAGACTAGAAGCCAGGAGTGTGCTAGTTTCTCCAGTTGTTGAAAATCTTAGGAACCGTGTGCCTTCAACTGAGGCTGAAATCAAGAGGGTTTCTAGCACTGGTGCTTTTGAGTCTGCAAGAAGTTCAAGTGCATCGAAGACTGAGGAGACAAATGATTTGGCTTCCCAGAAAAAGGAGGAAACAGTTGCTCCAAAAAGGGCTCCATCAAAGGAAAAACCTAGAGATACTTGTACTGCTACAGAGGCTTTGGAAGGAAAGGAAACAATGACCACAAAATGGAGAAGGATGTTGTGGAAATCTGGCGTTTATCTTGTTACAATAGGAATGTTGATTGCACTTCTTTTGGGCCTAAACATGTCATGGTGTGCGATTACTGCTGCACTTGCACTAGTCGTTCTTGATTTCAAGGATGCTCGGCCAAGCCTAGAAAAGGTATCCTATTCCCTTTTAATTTTCTTTTGTGGTATGTTTATAACTGTGGATGGCTTCAACAAAACCGGCATTCCAAGCGCTCTTTGGGACTTCATGGAGCCCCATGCAAAAATTGATCATGTTGGCGGGATAGCAGTTCTTGCTGTTACCATACTTCTACTATCAAATGTGGCCTCAAATGTGCCAACTGTTCTCTTGCTTGGAGGACGAGTGGCAGCATCCGCGGCTTTAATATCAGTAGCGGATGAGAAGAAGGCATGGCTGCTTCTAGCTTGGGTGAGCACGGTTGCAGGAAACCTCTCACTTTTGGGATCAGCAGCCAACTTGATAGTATGTGAACAGGCTCGGCAAGCTCCACACCTTGCATACAATTTGTCATTCTGGAGCCATCTCAAGTTTGGGGTGCCCTCCACTATCATAGTCACTGCTATTGACAACCTTTTAGCTCTTCCAATCTCGCCGCACAATCCGCCCTCCTCCATCGCCGTAACCGCCGCGATTCCCGCTCAAACTTCGCCGCACTTCAAAAGATTTCCAAGTGCTTCCTCCTCCTGCAGCTCGGAGATCACAAGCCAAGTGATAGCGAGTGAAATCAAATTCCTTATGGCCATGAGAAGCGTCCAGAACAGCAGCGTCGACACCATCAACGCCGCCGCCACCGCCATCGTCTCCGCCGAAGCGCGCGTCCAGCCTACCTCCGTCCCCAAAAGAAGATGGGGAAGCTGCTGGAGCCTATATTGGTGTTTTGGATATCAGAAAAGTAAGCGAATTGGTCTTGCGGTCCTTGTACCCGAGCCTACAGTACCAGGGGTTGCAGTTCCTGCCGCAGAAAACCAAACTTCCTCAACTTCTATTGTACTTCCCTTCATTGCCCCTCCCTCTTCTCCTGCATCTTTCCTGCCATCTGGACCACCATCGTCTACTCAATCACCTGGTGGATTCATGTCATTTGCTGCCCTTTCTGCCAATGCATACTCTCCAGGTGGAGCTCTGTCCATGTTTACCATTGGCCCTTATGCATATGAGACCCAATTAGTCTCACCACCGGTATTCTCTACATTCAACACTGAACCATCTACTGCTCCATATACTCCCCCTCCTGAATCCGTGCAACTGACTACACCTTCATCCCCTGAAGTGCCATTTGCTCAGCTTCTGACATCTTCGCTGGACCGAAGTCGTAGACACAGTGGTGGCAGTCAGAAGTTTGCATTGTCCTATGGCGAATTCCAGCCTTACCAACAATATCCAGGAAGCCCGGGTGGCCAACTCAGATCACCAGGATCAGCAATATCAAATTCCGGCACATCTTCTCCTTTTCCCGACAGATATCCAGTGCTTGAATTTCGCATGGGGGAAGCTCCCAAACTCTTAGGATTTGAACATTTTGCCGCTTATAAATGGGGTTCAAGGCTGGGTTCTGGATCATTAACACCAGATGGTGCGGGGTTGGGTTCCAGGCTAGGTTCTGGGACACTAACGCCAGACGGCTATGAGCTAGGTTCAAGGTTAGCTTCTGGATCTATGACCCCTAATGGTGTGGGAGTCGGTTCCAGGCTGGGTTCTGGATGTTTGACACCCGATGGTACAGGGCCTGCATCTAGAGAAGCTGGCCTTCTGGAGAACAAGATCTCTGAGGTGGCATCCCTGGCCAACTCTGAGAGTGAATGTCAAAATGATGGAAATGTATTTGATCACAGGGTGTCGTTTGAATTGACTTGTGAAGATGTTGTGTGCTGTCTTGCAAATAAACCAGGTGCATCTTTTAAAACTGCATCAGAATCGTCAAAGGATAAGTCAGCTGAATTCCCAAATGAAAGACATGGTTCATCAATAACAAATAGTCGAGCGCTGGGACAGTTTCAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006820 GO:0008150 GO:0008324 GO:0008490 GO:0008509 GO:0015075 GO:0015103 GO:0015105 GO:0015291 GO:0015318 GO:0015399 GO:0015405 GO:0015446 GO:0015698 GO:0015700 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019829 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0031224 GO:0031226 GO:0034220 GO:0042623 GO:0042625 GO:0042626 GO:0043225 GO:0043492 GO:0044425 GO:0044459 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071944 GO:0090662 GO:0098655 GO:0098656 GO:0098660 GO:0099131 GO:0099132 GO:0099133 GO:1901683 GO:1901684

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CitMHS

Protein Analysis

1016

Amino Acids

107.71

Weight (kDa)

7.78

Isoelectric Point (pI)

48.3

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CitMHS	PF03600	27 - 490	1.4e-92	Citrate transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004666)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G02260 AT1G02260
fragaria_vesca	FvH4_7g29922 FvH4_7g29950
malus_domestica	MD07G1275000.v1.1 MD07G1275200.v1.1 MD07G1275300.v1.1 MD07G1275500.v1.1 MD07G1275600.v1.1 MD07G1275700.v1.1
prunus_persica	Prupe.2G298200_v2.0.a1 Prupe.2G298200_v2.0.a1 Prupe.2G298200_v2.0.a1
pyrus_communis	pycom07g25110
rosa_chinensis	RchiOBHm_Chr1g0377891 RchiOBHm_Chr1g0377911
rosa_laevigata	RLG00000026487 RLG00000026488
rosa_multiflora	Rmu_sc0004611.1_g000001 Rmu_sc0004824.1_g000012 Rmu_sc0004824.1_g000015
rosa_roxburghii	Rroxscaffold_4G00280950 Rroxscaffold_4G00280970
rosa_rugosa	Rorug01G0405400
rosa_samantha	Rh1AG426100 Rh1AG426300 Rh1BG383000 Rh1CG396800 Rh1DG414000
rosa_wichuraiana	Rw1G037220 Rw1G037230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1220, 2577
AasI	GACNNNNNNGTC	1 cut(s)	112
AccB1I	GGYRCC	1 cut(s)	1582
AccB7I	CCANNNNNTGG	2 cut(s)	197, 1023
AccBSI	CCGCTC	1 cut(s)	1685
AccI	GTMKAC	3 cut(s)	1815, 2099, 2362
AccII	CGCG	5 cut(s)	665, 1403, 1676, 1861, 1863
AccIII	TCCGGA	1 cut(s)	160
AclWI	GGATC	5 cut(s)	171, 1498, 2470, 2611, 2707
AcoI	YGGCCR	4 cut(s)	1163, 1785, 2443, 2829
AcsI	RAATTY	6 cut(s)	549, 1775, 2405, 2476, 2522, 2984
AcuI	CTGAAG	1 cut(s)	2334
AdeI	CACNNNGTG	3 cut(s)	716, 2114, 2881
AfaI	GTAC	7 cut(s)	390, 608, 979, 1968, 1983, 2037, 2767
AfeI	AGCGCT	2 cut(s)	1258, 3030
AfiI	CCNNNNNNNGG	6 cut(s)	102, 160, 197, 919, 1023, 1177
AflIII	ACRYGT	1 cut(s)	1101
AgeI	ACCGGT	1 cut(s)	2224
AhlI	ACTAGT	1 cut(s)	1135
AleI	CACNNNNGTG	1 cut(s)	2370
Alw21I	GWGCWC	3 cut(s)	346, 1463, 2170
Alw26I	GTCTC	5 cut(s)	120, 887, 1852, 2198, 2221
AlwI	GGATC	5 cut(s)	171, 1498, 2470, 2611, 2707
AlwNI	CAGNNNCTG	3 cut(s)	2000, 2335, 2774
Ama87I	CYCGRG	2 cut(s)	1970, 2437
Aor13HI	TCCGGA	1 cut(s)	160
Aor51HI	AGCGCT	2 cut(s)	1258, 3030
ApoI	RAATTY	6 cut(s)	549, 1775, 2405, 2476, 2522, 2984
ArsI	GACNNNNNNTTYG	8 cut(s)	449, 481, 886, 918, 1848, 1880, 2960, 2992
AsiGI	ACCGGT	1 cut(s)	2224
AspLEI	GCGC	4 cut(s)	1259, 1861, 1863, 3031
AspS9I	GGNCC	6 cut(s)	1093, 1960, 2087, 2189, 2350, 2771
AsuC2I	CCSGG	2 cut(s)	2438, 2439
AsuHPI	GGTGA	6 cut(s)	343, 687, 1468, 2100, 2211, 2448
AvaI	CYCGRG	2 cut(s)	1970, 2437
AvaII	GGWCC	3 cut(s)	1960, 2087, 2350
BaeGI	GKGCMC	1 cut(s)	1587
BalI	TGGCCA	3 cut(s)	1787, 2445, 2831
BanI	GGYRCC	1 cut(s)	1582
BanII	GRGCYC	3 cut(s)	949, 1281, 2170
BbsI	GAAGAC	1 cut(s)	890
Bbv12I	GWGCWC	3 cut(s)	346, 1463, 2170
BceAI	ACGGC	2 cut(s)	1649, 2683
BcgI	CGANNNNNNTGC	2 cut(s)	2943, 2977
BciVI	GTATCC	1 cut(s)	1192
BclI	TGATCA	2 cut(s)	1294, 2872
BcnI	CCSGG	2 cut(s)	2438, 2439
BcoDI	GTCTC	5 cut(s)	120, 887, 1852, 2198, 2221
BcuI	ACTAGT	1 cut(s)	1135
BfmI	CTRYAG	4 cut(s)	468, 984, 1732, 1977
BfoI	RGCGCY	2 cut(s)	1260, 3032
BfuI	GTATCC	1 cut(s)	1192
BglI	GCCNNNNNGGC	1 cut(s)	2442
BglII	AGATCT	1 cut(s)	2808
BlpI	GCTNAGC	1 cut(s)	2328
Bme18I	GGWCC	3 cut(s)	1960, 2087, 2350
BmeT110I	CYCGRG	2 cut(s)	1970, 2437
BmgT120I	GGNCC	6 cut(s)	1093, 1960, 2087, 2189, 2350, 2771
BmiI	GGNNCC	9 cut(s)	37, 800, 948, 1278, 1565, 1584, 1910, 2635, 2731
BoxI	GACNNNNGTC	1 cut(s)	2355
BpiI	GAAGAC	1 cut(s)	890
BplI	GAGNNNNNCTC	2 cut(s)	728, 760
BpmI	CTGGAG	6 cut(s)	672, 762, 1582, 1927, 2142, 2819
Bpu1102I	GCTNAGC	1 cut(s)	2328
BpuEI	CTTGAG	1 cut(s)	1556
BpuMI	CCSGG	2 cut(s)	2438, 2439
BsaI	GGTCTC	2 cut(s)	120, 2198
BsaJI	CCNNGG	5 cut(s)	289, 1401, 1985, 2437, 2826
BsaWI	WCCGGW	2 cut(s)	160, 2224
Bsc4I	CCNNNNNNNGG	6 cut(s)	102, 160, 197, 919, 1023, 1177
Bse118I	RCCGGY	2 cut(s)	1244, 2224
Bse1I	ACTGG	6 cut(s)	450, 614, 655, 779, 850, 2513
Bse3DI	GCAATG	5 cut(s)	12, 39, 135, 567, 2046
BseAI	TCCGGA	1 cut(s)	160
BseDI	CCNNGG	5 cut(s)	289, 1401, 1985, 2437, 2826
BseLI	CCNNNNNNNGG	6 cut(s)	102, 160, 197, 919, 1023, 1177
BseMI	GCAATG	5 cut(s)	12, 39, 135, 567, 2046
BseMII	CTCAG	8 cut(s)	372, 723, 807, 879, 2342, 2464, 2805, 2829
BseNI	ACTGG	6 cut(s)	450, 614, 655, 779, 850, 2513
BsePI	GCGCGC	1 cut(s)	1859
BseRI	GAGGAG	5 cut(s)	683, 749, 905, 1645, 1717
BseSI	GKGCMC	1 cut(s)	1587
BseYI	CCCAGC	3 cut(s)	2593, 2737, 3031
BsgI	GTGCAG	1 cut(s)	1110
Bsh1236I	CGCG	5 cut(s)	665, 1403, 1676, 1861, 1863
BshNI	GGYRCC	1 cut(s)	1582
BshTI	ACCGGT	1 cut(s)	2224
BsiHKAI	GWGCWC	3 cut(s)	346, 1463, 2170
BsiHKCI	CYCGRG	2 cut(s)	1970, 2437
BsiSI	CCGG	5 cut(s)	161, 1245, 2225, 2438, 2481
BslFI	GGGAC	5 cut(s)	68, 226, 1280, 1865, 2665
BslI	CCNNNNNNNGG	6 cut(s)	102, 160, 197, 919, 1023, 1177
BsmAI	GTCTC	5 cut(s)	120, 887, 1852, 2198, 2221
BsmBI	CGTCTC	1 cut(s)	1852
BsmFI	GGGAC	5 cut(s)	68, 226, 1280, 1865, 2665
BsmI	GAATGC	2 cut(s)	589, 1248
Bso31I	GGTCTC	2 cut(s)	120, 2198
BsoBI	CYCGRG	2 cut(s)	1970, 2437
Bsp1286I	GDGCHC	6 cut(s)	346, 949, 1281, 1463, 1587, 2170
Bsp13I	TCCGGA	1 cut(s)	160
Bsp1720I	GCTNAGC	1 cut(s)	2328
BspCNI	CTCAG	8 cut(s)	373, 724, 808, 880, 2341, 2463, 2806, 2830
BspEI	TCCGGA	1 cut(s)	160
BspFNI	CGCG	5 cut(s)	665, 1403, 1676, 1861, 1863
BspLI	GGNNCC	9 cut(s)	37, 800, 948, 1278, 1565, 1584, 1910, 2635, 2731
BspMAI	CTGCAG	2 cut(s)	472, 1736
BspPI	GGATC	5 cut(s)	171, 1498, 2470, 2611, 2707
BspQI	GCTCTTC	1 cut(s)	1632
BspT107I	GGYRCC	1 cut(s)	1582
BspTNI	GGTCTC	2 cut(s)	120, 2198
BsrBI	CCGCTC	1 cut(s)	1685
BsrDI	GCAATG	5 cut(s)	12, 39, 135, 567, 2046
BsrFI	RCCGGY	2 cut(s)	1244, 2224
BsrI	ACTGG	6 cut(s)	450, 614, 655, 779, 850, 2513
BssAI	RCCGGY	2 cut(s)	1244, 2224
BssECI	CCNNGG	5 cut(s)	289, 1401, 1985, 2437, 2826
BssHII	GCGCGC	1 cut(s)	1859
BssT1I	CCWWGG	1 cut(s)	289
Bst4CI	ACNGT	8 cut(s)	803, 931, 1225, 1369, 1465, 1981, 2369, 3039
Bst6I	CTCTTC	2 cut(s)	1632, 2065
BstAPI	GCANNNNNTGC	2 cut(s)	1319, 2000
BstC8I	GCNNGC	5 cut(s)	438, 1530, 1861, 2775, 2791
BstDSI	CCRYGG	1 cut(s)	1401
BstENI	CCTNNNNNAGG	1 cut(s)	1175
BstFNI	CGCG	5 cut(s)	665, 1403, 1676, 1861, 1863
BstH2I	RGCGCY	2 cut(s)	1260, 3032
BstHHI	GCGC	4 cut(s)	1259, 1861, 1863, 3031
BstMAI	GTCTC	5 cut(s)	120, 887, 1852, 2198, 2221
BstNSI	RCATGY	1 cut(s)	1105
BstPAI	GACNNNNGTC	1 cut(s)	2355
BstSFI	CTRYAG	4 cut(s)	468, 984, 1732, 1977
BstSLI	GKGCMC	1 cut(s)	1587
BstUI	CGCG	5 cut(s)	665, 1403, 1676, 1861, 1863
BstV2I	GAAGAC	1 cut(s)	890
BstX2I	RGATCY	2 cut(s)	2699, 2808
BstYI	RGATCY	2 cut(s)	2699, 2808
BsuI	GTATCC	1 cut(s)	1192
BtgI	CCRYGG	1 cut(s)	1401
BtgZI	GCGATG	1 cut(s)	1645
BtsI	GCAGTG	1 cut(s)	1602
BtsIMutI	CAGTG	6 cut(s)	457, 843, 1602, 2244, 2374, 2520
Cac8I	GCNNGC	5 cut(s)	438, 1530, 1861, 2775, 2791
CaiI	CAGNNNCTG	3 cut(s)	2000, 2335, 2774
CfoI	GCGC	4 cut(s)	1259, 1861, 1863, 3031
Cfr10I	RCCGGY	2 cut(s)	1244, 2224
Cfr13I	GGNCC	6 cut(s)	1093, 1960, 2087, 2189, 2350, 2771
Cfr42I	CCGCGG	1 cut(s)	1404
Cfr9I	CCCGGG	1 cut(s)	2437
CseI	GACGC	3 cut(s)	1786, 1801, 1852
CsiI	ACCWGGT	3 cut(s)	498, 2110, 2932
Csp6I	GTAC	7 cut(s)	389, 607, 978, 1967, 1982, 2036, 2766
CspAI	ACCGGT	1 cut(s)	2224
CviQI	GTAC	7 cut(s)	389, 607, 978, 1967, 1982, 2036, 2766
DraI	TTTAAA	1 cut(s)	2947
DraIII	CACNNNGTG	3 cut(s)	716, 2114, 2881
DrdI	GACNNNNNNGTC	1 cut(s)	112
DseDI	GACNNNNNNGTC	1 cut(s)	112
EaeI	YGGCCR	4 cut(s)	1163, 1785, 2443, 2829
Eam1104I	CTCTTC	2 cut(s)	1632, 2065
EarI	CTCTTC	2 cut(s)	1632, 2065
EciI	GGCGGA	2 cut(s)	1638, 1840
Ecl136II	GAGCTC	1 cut(s)	2168
Eco130I	CCWWGG	1 cut(s)	289
Eco24I	GRGCYC	3 cut(s)	949, 1281, 2170
Eco31I	GGTCTC	2 cut(s)	120, 2198
Eco32I	GATATC	2 cut(s)	1931, 2510
Eco47I	GGWCC	3 cut(s)	1960, 2087, 2350
Eco47III	AGCGCT	2 cut(s)	1258, 3030
Eco53kI	GAGCTC	1 cut(s)	2168
Eco57I	CTGAAG	1 cut(s)	2334
Eco88I	CYCGRG	2 cut(s)	1970, 2437
EcoICRI	GAGCTC	1 cut(s)	2168
EcoNI	CCTNNNNNAGG	1 cut(s)	1175
EcoO109I	RGGNCCY	1 cut(s)	2771
EcoRI	GAATTC	2 cut(s)	2405, 2984
EcoRV	GATATC	2 cut(s)	1931, 2510
EcoT14I	CCWWGG	1 cut(s)	289
EcoT22I	ATGCAT	2 cut(s)	2152, 2200
EcoT38I	GRGCYC	3 cut(s)	949, 1281, 2170
ErhI	CCWWGG	1 cut(s)	289
Esp3I	CGTCTC	1 cut(s)	1852
FalI	AAGNNNNNCTT	6 cut(s)	260, 292, 2677, 2709, 2778, 2810
FaqI	GGGAC	5 cut(s)	68, 226, 1280, 1865, 2665
FauI	CCCGC	3 cut(s)	1298, 1690, 2617
FauNDI	CATATG	1 cut(s)	2200
FbaI	TGATCA	2 cut(s)	1294, 2872
FblI	GTMKAC	3 cut(s)	1815, 2099, 2362
FriOI	GRGCYC	3 cut(s)	949, 1281, 2170
GlaI	GCGC	4 cut(s)	1258, 1860, 1862, 3030
GsaI	CCCAGC	3 cut(s)	2597, 2741, 3035
GsuI	CTGGAG	6 cut(s)	672, 762, 1582, 1927, 2142, 2819
HaeII	RGCGCY	2 cut(s)	1260, 3032
HapII	CCGG	5 cut(s)	161, 1245, 2225, 2438, 2481
HgaI	GACGC	3 cut(s)	1786, 1801, 1852
HhaI	GCGC	4 cut(s)	1259, 1861, 1863, 3031
Hin6I	GCGC	4 cut(s)	1257, 1859, 1861, 3029
HinP1I	GCGC	4 cut(s)	1257, 1859, 1861, 3029
HincII	GTYRAC	1 cut(s)	1816
HindII	GTYRAC	1 cut(s)	1816
HinfI	GANTC	7 cut(s)	150, 857, 1678, 2118, 2282, 2724, 2960
HpaII	CCGG	5 cut(s)	161, 1245, 2225, 2438, 2481
HphI	GGTGA	6 cut(s)	343, 687, 1468, 2100, 2211, 2448
Hpy166II	GTNNAC	5 cut(s)	1517, 1816, 2100, 2181, 2363
Hpy8I	GTNNAC	5 cut(s)	1517, 1816, 2100, 2181, 2363
Hpy99I	CGWCG	1 cut(s)	1817
HpyAV	CCTTC	9 cut(s)	625, 733, 819, 992, 1023, 1426, 2053, 2313, 2804
HpyCH4III	ACNGT	8 cut(s)	803, 931, 1225, 1369, 1465, 1981, 2369, 3039
HspAI	GCGC	4 cut(s)	1257, 1859, 1861, 3029
Kpn2I	TCCGGA	1 cut(s)	160
Ksp22I	TGATCA	2 cut(s)	1294, 2872
KspI	CCGCGG	1 cut(s)	1404
LguI	GCTCTTC	1 cut(s)	1632
MabI	ACCWGGT	3 cut(s)	498, 2110, 2932
MaeIII	GTNAC	5 cut(s)	518, 1060, 1324, 1600, 1666
MbiI	CCGCTC	1 cut(s)	1685
MfeI	CAATTG	1 cut(s)	480
MflI	RGATCY	2 cut(s)	2699, 2808
MhlI	GDGCHC	6 cut(s)	346, 949, 1281, 1463, 1587, 2170
MlsI	TGGCCA	3 cut(s)	1787, 2445, 2831
MluNI	TGGCCA	3 cut(s)	1787, 2445, 2831
MlyI	GAGTC	3 cut(s)	159, 866, 2733
Mox20I	TGGCCA	3 cut(s)	1787, 2445, 2831
Mph1103I	ATGCAT	2 cut(s)	2152, 2200
MroI	TCCGGA	1 cut(s)	160
MscI	TGGCCA	3 cut(s)	1787, 2445, 2831
MseI	TTAA	5 cut(s)	255, 1196, 1409, 2609, 2946
MslI	CAYNNNNRTG	1 cut(s)	2370
Msp20I	TGGCCA	3 cut(s)	1787, 2445, 2831
MspA1I	CMGCKG	3 cut(s)	80, 1403, 2981
MspI	CCGG	5 cut(s)	161, 1245, 2225, 2438, 2481
MunI	CAATTG	1 cut(s)	480
Mva1269I	GAATGC	2 cut(s)	589, 1248
MvnI	CGCG	5 cut(s)	665, 1403, 1676, 1861, 1863
NciI	CCSGG	2 cut(s)	2438, 2439
NdeI	CATATG	1 cut(s)	2200
NlaIV	GGNNCC	9 cut(s)	37, 800, 948, 1278, 1565, 1584, 1910, 2635, 2731
NmeAIII	GCCGAG	2 cut(s)	1141, 1504
NmuCI	GTSAC	1 cut(s)	1600
NsiI	ATGCAT	2 cut(s)	2152, 2200
NspI	RCATGY	1 cut(s)	1105
OliI	CACNNNNGTG	1 cut(s)	2370
PauI	GCGCGC	1 cut(s)	1859
PciI	ACATGT	1 cut(s)	1101
PciSI	GCTCTTC	1 cut(s)	1632
PcsI	WCGNNNNNNNCGW	1 cut(s)	1851
PctI	GAATGC	2 cut(s)	589, 1248
PfeI	GAWTC	4 cut(s)	1678, 2118, 2282, 2960
PflMI	CCANNNNNTGG	2 cut(s)	197, 1023
PfoI	TCCNGGA	1 cut(s)	2428
PinAI	ACCGGT	1 cut(s)	2224
PleI	GAGTC	3 cut(s)	158, 865, 2732
PpsI	GAGTC	3 cut(s)	158, 865, 2732
PscI	ACATGT	1 cut(s)	1101
PshAI	GACNNNNGTC	1 cut(s)	2355
PsiI	TTATAA	2 cut(s)	1220, 2577
Psp124BI	GAGCTC	1 cut(s)	2170
PspFI	CCCAGC	3 cut(s)	2593, 2737, 3031
PspN4I	GGNNCC	9 cut(s)	37, 800, 948, 1278, 1565, 1584, 1910, 2635, 2731
PspPI	GGNCC	6 cut(s)	1093, 1960, 2087, 2189, 2350, 2771
PstI	CTGCAG	2 cut(s)	472, 1736
PstNI	CAGNNNCTG	3 cut(s)	2000, 2335, 2774
PsuI	RGATCY	2 cut(s)	2699, 2808
PteI	GCGCGC	1 cut(s)	1859
PvuII	CAGCTG	2 cut(s)	80, 2981
RsaI	GTAC	7 cut(s)	390, 608, 979, 1968, 1983, 2037, 2767
RsaNI	GTAC	7 cut(s)	389, 607, 978, 1967, 1982, 2036, 2766
RseI	CAYNNNNRTG	1 cut(s)	2370
SacI	GAGCTC	1 cut(s)	2170
SacII	CCGCGG	1 cut(s)	1404
SalI	GTCGAC	1 cut(s)	1814
SapI	GCTCTTC	1 cut(s)	1632
SaqAI	TTAA	5 cut(s)	255, 1196, 1409, 2609, 2946
Sau96I	GGNCC	6 cut(s)	1093, 1960, 2087, 2189, 2350, 2771
SchI	GAGTC	3 cut(s)	159, 866, 2733
SduI	GDGCHC	6 cut(s)	346, 949, 1281, 1463, 1587, 2170
SexAI	ACCWGGT	3 cut(s)	498, 2110, 2932
SfcI	CTRYAG	4 cut(s)	468, 984, 1732, 1977
Sfr303I	CCGCGG	1 cut(s)	1404
SgrBI	CCGCGG	1 cut(s)	1404
SinI	GGWCC	3 cut(s)	1960, 2087, 2350
SmaI	CCCGGG	1 cut(s)	2439
SmiMI	CAYNNNNRTG	1 cut(s)	2370
SmlI	CTYRAG	1 cut(s)	1571
SmoI	CTYRAG	1 cut(s)	1571
SpeI	ACTAGT	1 cut(s)	1135
SspI	AATATT	1 cut(s)	460
SstI	GAGCTC	1 cut(s)	2170
StyI	CCWWGG	1 cut(s)	289
TaaI	ACNGT	8 cut(s)	803, 931, 1225, 1369, 1465, 1981, 2369, 3039
TaqI	TCGA	3 cut(s)	881, 1815, 3025
TaqII	GACCGA	1 cut(s)	2367
TatI	WGTACW	4 cut(s)	388, 606, 977, 2035
TauI	GCSGC	8 cut(s)	1406, 1642, 1676, 1699, 1832, 1835, 2006, 2573
TfiI	GAWTC	4 cut(s)	1678, 2118, 2282, 2960
Tru1I	TTAA	5 cut(s)	255, 1196, 1409, 2609, 2946
Tru9I	TTAA	5 cut(s)	255, 1196, 1409, 2609, 2946
TscAI	CASTG	6 cut(s)	457, 850, 1609, 2251, 2374, 2520
TseFI	GTSAC	1 cut(s)	1600
Tsp45I	GTSAC	1 cut(s)	1600
TspDTI	ATGAA	6 cut(s)	1261, 2035, 2110, 2295, 2997, 3009
TspGWI	ACGGA	2 cut(s)	1867, 2275
TspMI	CCCGGG	1 cut(s)	2437
TspRI	CASTG	6 cut(s)	457, 850, 1609, 2251, 2374, 2520
Van91I	CCANNNNNTGG	2 cut(s)	197, 1023
VpaK11BI	GGWCC	3 cut(s)	1960, 2087, 2350
XagI	CCTNNNNNAGG	1 cut(s)	1175
XapI	RAATTY	6 cut(s)	549, 1775, 2405, 2476, 2522, 2984
XbaI	TCTAGA	2 cut(s)	746, 2780
XceI	RCATGY	1 cut(s)	1105
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1260, 1574
XmaI	CCCGGG	1 cut(s)	2437
XmiI	GTMKAC	3 cut(s)	1815, 2099, 2362
Zsp2I	ATGCAT	2 cut(s)	2152, 2200

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.