Rmu_sc0004611.1_g000001

Transporter

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004611.1
Physical Location & Seq
Forward (+)
527 .. 2758
2232 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004611.1_g000001.1.cds

Sequence Viewer

Length: 1587 bp
atggcttcttctgtcaaagtggttctaggctcaattgcctttgcaacattctggatattggcggtgtttccggctgtcccttttctgccaattgggaggactgcagggtctctttttggggcaatgctgatggttgtgttcggagtcctaactccggatcaagcctacgctgcaattgatctcccaatcattggacttttgtttgggacaatggttgtgagtatctatcttgaaagagcagatatgttcaagtatttgggcaagttactcttgtggaaaagccaaggagcaaaggacttgatatgtagagtctgtttgatttctgccatttcaagtgctctgttaaccaatgacaccgcttgcgtggttttgaccgagtttgtactaaaagttgcaaaacaacacaacttaccgcctcgtccgttcctgcttgcacttgccacaagtgcaaatattgggtctgcagcaaccccaatcggcaatcctcagaacctggttatagctgttcggagtaacattccttttggaaagtttgttttaggaattttccctgcaatgcttgtaggagtttgtgtgaatgctttgcttcttttgtgtatgttctggaagttgttgtttatccagaaggatgtggaagacgcaactggagaggttgtcggggaggaggatgtgatttctcatcggttttcaccagccttcaacccagaggaaaccaagagtctgctaggttctccatttgttgagaaccgtgggaaccgtgtgccttcagctgagaacgagatcaagagggtttcaagtgctggtacttttgagtctgcaagaaattcaagtgcgtcaaagactgaggagacaaatgatgtggcttcccagaaaaaggaggaaccagttgctctgaaaatgactagatcaaaggaaaaacttggagataattgtactgctacagagtctttggaaggaaaggaaaatttgaccacaaaatggagaaggatgttgtggaaatctggcgtttattttgttaccataggaatgttggttgcgtttcttatgggcctgagcatgtcatggtgcgcgattactgctgcacttgctctcgttgttcttgatttcaaggatgctcggccatgcctagaaaaggtatcatattcacttttaattttcttctgtggtatgtttataactgtggatggcttcaacaaaactgaaattccaagcactctttggcacttcatggagccccatgcgaaaattgatcatgttggcggaatagcagttcttgctgttaccatactcgtactatcaaacgtggcttcaaacgtgccaactgttctcttgcttggaggacgagtggcagcatccgcagcttcaatatcagcagcggatgagaagaaggcatggctgcttctagcttgggtgagcaccgtggccgggaacctctcgctaatgggatcagcagccaacttgatagtatgtgaacaggctcgccaacctccactccttgcatacaatttgtcattctggagccatctcaaatttggggtgccgtccactattatagtcactgctattggtttgacactgataagatga

Protein Analysis

528

Amino Acids

56.94

Weight (kDa)

8.58

Isoelectric Point (pI)

37.09

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1175
AasI GACNNNNNNGTC 1 cut(s) 106
AccB1I GGYRCC 1 cut(s) 1537
AccB7I CCANNNNNTGG 2 cut(s) 191, 978
AccII CGCG 1 cut(s) 1070
AccIII TCCGGA 1 cut(s) 154
AciI CCGC 6 cut(s) 62, 357, 413, 1260, 1356, 1376
AclWI GGATC 2 cut(s) 165, 1453
AcoI YGGCCR 2 cut(s) 1118, 1422
AcsI RAATTY 5 cut(s) 543, 823, 964, 1203, 1529
AcuI CTGAAG 1 cut(s) 750
AfaI GTAC 4 cut(s) 384, 805, 934, 1293
AfiI CCNNNNNNNGG 6 cut(s) 154, 191, 874, 978, 1132, 1425
AjnI CCWGG 1 cut(s) 492
AloI GAACNNNNNNTCC 2 cut(s) 1254, 1286
AluBI AGCT 4 cut(s) 503, 770, 1361, 1406
AluI AGCT 4 cut(s) 503, 770, 1361, 1406
Alw21I GWGCWC 2 cut(s) 340, 1418
Alw26I GTCTC 2 cut(s) 114, 842
AlwI GGATC 2 cut(s) 165, 1453
AlwNI CAGNNNCTG 1 cut(s) 493
Aor13HI TCCGGA 1 cut(s) 154
AoxI GGCC 3 cut(s) 1048, 1118, 1422
ApeKI GCWGC 8 cut(s) 170, 464, 1079, 1349, 1358, 1373, 1396, 1451
ApoI RAATTY 5 cut(s) 543, 823, 964, 1203, 1529
ArsI GACNNNNNNTTYG 2 cut(s) 443, 475
AspLEI GCGC 1 cut(s) 1070
AspS9I GGNCC 1 cut(s) 1048
AsuC2I CCSGG 1 cut(s) 1426
AsuHPI GGTGA 2 cut(s) 681, 1423
BanI GGYRCC 1 cut(s) 1537
BanII GRGCYC 1 cut(s) 1236
BbsI GAAGAC 1 cut(s) 642
Bbv12I GWGCWC 2 cut(s) 340, 1418
BbvI GCAGC 8 cut(s) 157, 476, 1066, 1361, 1370, 1383, 1385, 1463
BccI CCATC 3 cut(s) 124, 1178, 1530
BceAI ACGGC 1 cut(s) 1525
BciT130I CCWGG 1 cut(s) 494
BclI TGATCA 1 cut(s) 1249
BcnI CCSGG 1 cut(s) 1426
BcoDI GTCTC 2 cut(s) 114, 842
BfaI CTAG 5 cut(s) 26, 725, 903, 1127, 1403
BfmI CTRYAG 3 cut(s) 102, 462, 939
BisI GCNGC 8 cut(s) 171, 465, 1080, 1350, 1359, 1374, 1397, 1452
BlsI GCNGC 8 cut(s) 172, 466, 1081, 1351, 1360, 1375, 1398, 1453
Bme1390I CCNGG 2 cut(s) 494, 1426
BmgT120I GGNCC 1 cut(s) 1048
BmiI GGNNCC 6 cut(s) 755, 882, 1233, 1430, 1520, 1539
BmrFI CCNGG 2 cut(s) 494, 1426
BmsI GCATC 2 cut(s) 1102, 1361
BpiI GAAGAC 1 cut(s) 642
BpmI CTGGAG 2 cut(s) 666, 1537
Bpu10I CCTNAGC 1 cut(s) 1052
BpuMI CCSGG 1 cut(s) 1426
BsaI GGTCTC 1 cut(s) 114
BsaJI CCNNGG 3 cut(s) 283, 748, 1419
BsaWI WCCGGW 1 cut(s) 154
BsaXI ACNNNNNCTCC 8 cut(s) 558, 588, 639, 669, 1329, 1359, 1476, 1506
Bsc4I CCNNNNNNNGG 6 cut(s) 154, 191, 874, 978, 1132, 1425
Bse1I ACTGG 2 cut(s) 649, 884
Bse3DI GCAATG 2 cut(s) 129, 561
BseAI TCCGGA 1 cut(s) 154
BseBI CCWGG 1 cut(s) 494
BseDI CCNNGG 3 cut(s) 283, 748, 1419
BseGI GGATG 7 cut(s) 634, 673, 993, 1117, 1189, 1352, 1384
BseLI CCNNNNNNNGG 6 cut(s) 154, 191, 874, 978, 1132, 1425
BseMI GCAATG 2 cut(s) 129, 561
BseMII CTCAG 4 cut(s) 500, 762, 834, 1043
BseNI ACTGG 2 cut(s) 649, 884
BseRI GAGGAG 2 cut(s) 677, 860
BseXI GCAGC 8 cut(s) 157, 476, 1066, 1361, 1370, 1383, 1385, 1463
BsgI GTGCAG 1 cut(s) 1065
Bsh1236I CGCG 1 cut(s) 1070
BshFI GGCC 3 cut(s) 1050, 1120, 1424
BshNI GGYRCC 1 cut(s) 1537
BsiHKAI GWGCWC 2 cut(s) 340, 1418
BsiSI CCGG 3 cut(s) 71, 155, 1425
BslFI GGGAC 2 cut(s) 62, 220
BslI CCNNNNNNNGG 6 cut(s) 154, 191, 874, 978, 1132, 1425
BsmAI GTCTC 2 cut(s) 114, 842
BsmFI GGGAC 2 cut(s) 62, 220
BsmI GAATGC 1 cut(s) 583
BsnI GGCC 3 cut(s) 1050, 1120, 1424
Bso31I GGTCTC 1 cut(s) 114
Bsp1286I GDGCHC 3 cut(s) 340, 1236, 1418
Bsp13I TCCGGA 1 cut(s) 154
Bsp143I GATC 6 cut(s) 157, 178, 780, 905, 1249, 1445
BspACI CCGC 6 cut(s) 62, 357, 413, 1260, 1356, 1376
BspANI GGCC 3 cut(s) 1050, 1120, 1424
BspCNI CTCAG 4 cut(s) 499, 763, 835, 1044
BspEI TCCGGA 1 cut(s) 154
BspFNI CGCG 1 cut(s) 1070
BspLI GGNNCC 6 cut(s) 755, 882, 1233, 1430, 1520, 1539
BspMAI CTGCAG 2 cut(s) 106, 466
BspPI GGATC 2 cut(s) 165, 1453
BspT107I GGYRCC 1 cut(s) 1537
BspTNI GGTCTC 1 cut(s) 114
BsrDI GCAATG 2 cut(s) 129, 561
BsrI ACTGG 2 cut(s) 649, 884
BssECI CCNNGG 3 cut(s) 283, 748, 1419
BssMI GATC 6 cut(s) 157, 178, 780, 905, 1249, 1445
BssT1I CCWWGG 1 cut(s) 283
Bst2UI CCWGG 1 cut(s) 494
Bst4CI ACNGT 5 cut(s) 749, 758, 1180, 1324, 1420
BstAPI GCANNNNNTGC 1 cut(s) 1274
BstC8I GCNNGC 3 cut(s) 361, 432, 1480
BstDEI CTNAG 4 cut(s) 486, 771, 843, 1052
BstDSI CCRYGG 2 cut(s) 748, 1419
BstENI CCTNNNNNAGG 1 cut(s) 1130
BstF5I GGATG 7 cut(s) 634, 673, 993, 1117, 1189, 1352, 1384
BstFNI CGCG 1 cut(s) 1070
BstHHI GCGC 1 cut(s) 1070
BstKTI GATC 6 cut(s) 160, 181, 783, 908, 1252, 1448
BstMAI GTCTC 2 cut(s) 114, 842
BstMBI GATC 6 cut(s) 157, 178, 780, 905, 1249, 1445
BstMWI GCNNNNNNNGC 7 cut(s) 170, 446, 1076, 1085, 1274, 1355, 1358
BstNI CCWGG 1 cut(s) 494
BstNSI RCATGY 1 cut(s) 1060
BstSCI CCNGG 2 cut(s) 492, 1424
BstSFI CTRYAG 3 cut(s) 102, 462, 939
BstUI CGCG 1 cut(s) 1070
BstV1I GCAGC 8 cut(s) 157, 476, 1066, 1361, 1370, 1383, 1385, 1463
BstV2I GAAGAC 1 cut(s) 642
BsuRI GGCC 3 cut(s) 1050, 1120, 1424
BtgI CCRYGG 2 cut(s) 748, 1419
BtsCI GGATG 7 cut(s) 634, 673, 993, 1117, 1189, 1352, 1384
BtsI GCAGTG 1 cut(s) 1557
BtsIMutI CAGTG 2 cut(s) 1557, 1574
Cac8I GCNNGC 3 cut(s) 361, 432, 1480
CaiI CAGNNNCTG 1 cut(s) 493
CfoI GCGC 1 cut(s) 1070
Cfr13I GGNCC 1 cut(s) 1048
CseI GACGC 2 cut(s) 647, 822
CsiI ACCWGGT 1 cut(s) 492
Csp6I GTAC 4 cut(s) 383, 804, 933, 1292
CspCI CAANNNNNGTGG 2 cut(s) 840, 875
CviAII CATG 7 cut(s) 1057, 1062, 1122, 1228, 1238, 1253, 1392
CviQI GTAC 4 cut(s) 383, 804, 933, 1292
DdeI CTNAG 4 cut(s) 486, 771, 843, 1052
DpnI GATC 6 cut(s) 159, 180, 782, 907, 1251, 1447
DpnII GATC 6 cut(s) 157, 178, 780, 905, 1249, 1445
DrdI GACNNNNNNGTC 1 cut(s) 106
DseDI GACNNNNNNGTC 1 cut(s) 106
EaeI YGGCCR 2 cut(s) 1118, 1422
EciI GGCGGA 1 cut(s) 1275
Eco130I CCWWGG 1 cut(s) 283
Eco24I GRGCYC 1 cut(s) 1236
Eco31I GGTCTC 1 cut(s) 114
Eco57I CTGAAG 1 cut(s) 750
EcoNI CCTNNNNNAGG 1 cut(s) 1130
EcoRII CCWGG 1 cut(s) 492
EcoT14I CCWWGG 1 cut(s) 283
EcoT38I GRGCYC 1 cut(s) 1236
ErhI CCWWGG 1 cut(s) 283
FaeI CATG 7 cut(s) 1060, 1065, 1125, 1231, 1241, 1256, 1395
FalI AAGNNNNNCTT 2 cut(s) 254, 286
FaqI GGGAC 2 cut(s) 62, 220
FatI CATG 7 cut(s) 1056, 1061, 1121, 1227, 1237, 1252, 1391
FbaI TGATCA 1 cut(s) 1249
Fnu4HI GCNGC 8 cut(s) 171, 465, 1080, 1350, 1359, 1374, 1397, 1452
FokI GGATG 7 cut(s) 641, 680, 1000, 1124, 1196, 1339, 1391
FriOI GRGCYC 1 cut(s) 1236
Fsp4HI GCNGC 8 cut(s) 171, 465, 1080, 1350, 1359, 1374, 1397, 1452
FspBI CTAG 5 cut(s) 26, 725, 903, 1127, 1403
GlaI GCGC 1 cut(s) 1069
GluI GCNGC 8 cut(s) 171, 465, 1080, 1350, 1359, 1374, 1397, 1452
GsuI CTGGAG 2 cut(s) 666, 1537
HaeIII GGCC 3 cut(s) 1050, 1120, 1424
HapII CCGG 3 cut(s) 71, 155, 1425
HgaI GACGC 2 cut(s) 647, 822
HhaI GCGC 1 cut(s) 1070
Hin1II CATG 7 cut(s) 1060, 1065, 1125, 1231, 1241, 1256, 1395
Hin6I GCGC 1 cut(s) 1068
HinP1I GCGC 1 cut(s) 1068
HincII GTYRAC 1 cut(s) 345
HindII GTYRAC 1 cut(s) 345
HinfI GANTC 5 cut(s) 144, 309, 718, 812, 944
HpaI GTTAAC 1 cut(s) 345
HpaII CCGG 3 cut(s) 71, 155, 1425
HphI GGTGA 2 cut(s) 681, 1423
Hpy166II GTNNAC 3 cut(s) 345, 1472, 1545
Hpy188I TCNGA 4 cut(s) 143, 489, 510, 894
Hpy188III TCNNGA 8 cut(s) 52, 155, 230, 604, 622, 784, 1100, 1516
Hpy8I GTNNAC 3 cut(s) 345, 1472, 1545
HpyAV CCTTC 6 cut(s) 619, 706, 774, 947, 978, 1381
HpyCH4III ACNGT 5 cut(s) 749, 758, 1180, 1324, 1420
HpyCH4IV ACGT 2 cut(s) 1302, 1314
HpyF10VI GCNNNNNNNGC 7 cut(s) 170, 446, 1076, 1085, 1274, 1355, 1358
HpyF3I CTNAG 4 cut(s) 486, 771, 843, 1052
HpySE526I ACGT 2 cut(s) 1302, 1314
Hsp92II CATG 7 cut(s) 1060, 1065, 1125, 1231, 1241, 1256, 1395
HspAI GCGC 1 cut(s) 1068
Kpn2I TCCGGA 1 cut(s) 154
Ksp22I TGATCA 1 cut(s) 1249
KspAI GTTAAC 1 cut(s) 345
Kzo9I GATC 6 cut(s) 157, 178, 780, 905, 1249, 1445
LmnI GCTCC 3 cut(s) 287, 1231, 1518
Lsp1109I GCAGC 8 cut(s) 157, 476, 1066, 1361, 1370, 1383, 1385, 1463
LweI GCATC 2 cut(s) 1102, 1361
MabI ACCWGGT 1 cut(s) 492
MaeI CTAG 5 cut(s) 26, 725, 903, 1127, 1403
MaeII ACGT 2 cut(s) 1302, 1314
MaeIII GTNAC 5 cut(s) 264, 512, 1015, 1279, 1555
MalI GATC 6 cut(s) 159, 180, 782, 907, 1251, 1447
MboI GATC 6 cut(s) 157, 178, 780, 905, 1249, 1445
MboII GAAGA 3 cut(s) 647, 1150, 1396
MfeI CAATTG 3 cut(s) 33, 90, 174
MhlI GDGCHC 3 cut(s) 340, 1236, 1418
MlyI GAGTC 5 cut(s) 153, 318, 727, 821, 953
MroI TCCGGA 1 cut(s) 154
MseI TTAA 2 cut(s) 344, 1151
MslI CAYNNNNRTG 1 cut(s) 1025
MspA1I CMGCKG 2 cut(s) 770, 1376
MspI CCGG 3 cut(s) 71, 155, 1425
MspR9I CCNGG 2 cut(s) 494, 1426
MunI CAATTG 3 cut(s) 33, 90, 174
Mva1269I GAATGC 1 cut(s) 583
MvaI CCWGG 1 cut(s) 494
MvnI CGCG 1 cut(s) 1070
MwoI GCNNNNNNNGC 7 cut(s) 170, 446, 1076, 1085, 1274, 1355, 1358
NciI CCSGG 1 cut(s) 1426
NdeII GATC 6 cut(s) 157, 178, 780, 905, 1249, 1445
NlaIII CATG 7 cut(s) 1060, 1065, 1125, 1231, 1241, 1256, 1395
NlaIV GGNNCC 6 cut(s) 755, 882, 1233, 1430, 1520, 1539
NmeAIII GCCGAG 1 cut(s) 1096
NmuCI GTSAC 1 cut(s) 1555
NspI RCATGY 1 cut(s) 1060
PctI GAATGC 1 cut(s) 583
PflMI CCANNNNNTGG 2 cut(s) 191, 978
PkrI GCNGC 8 cut(s) 172, 466, 1081, 1351, 1360, 1375, 1398, 1453
PleI GAGTC 5 cut(s) 152, 317, 726, 820, 952
PpsI GAGTC 5 cut(s) 152, 317, 726, 820, 952
PsiI TTATAA 1 cut(s) 1175
Psp6I CCWGG 1 cut(s) 492
PspGI CCWGG 1 cut(s) 492
PspN4I GGNNCC 6 cut(s) 755, 882, 1233, 1430, 1520, 1539
PspPI GGNCC 1 cut(s) 1048
PstI CTGCAG 2 cut(s) 106, 466
PstNI CAGNNNCTG 1 cut(s) 493
PvuII CAGCTG 1 cut(s) 770
RsaI GTAC 4 cut(s) 384, 805, 934, 1293
RsaNI GTAC 4 cut(s) 383, 804, 933, 1292
RseI CAYNNNNRTG 1 cut(s) 1025
SaqAI TTAA 2 cut(s) 344, 1151
SatI GCNGC 8 cut(s) 171, 465, 1080, 1350, 1359, 1374, 1397, 1452
Sau3AI GATC 6 cut(s) 157, 178, 780, 905, 1249, 1445
Sau96I GGNCC 1 cut(s) 1048
SchI GAGTC 5 cut(s) 153, 318, 727, 821, 953
ScrFI CCNGG 2 cut(s) 494, 1426
SduI GDGCHC 3 cut(s) 340, 1236, 1418
SexAI ACCWGGT 1 cut(s) 492
SfaNI GCATC 2 cut(s) 1102, 1361
SfcI CTRYAG 3 cut(s) 102, 462, 939
SmiMI CAYNNNNRTG 1 cut(s) 1025
SsiI CCGC 6 cut(s) 62, 357, 413, 1260, 1356, 1376
SspI AATATT 1 cut(s) 454
SspMI CTAG 5 cut(s) 26, 725, 903, 1127, 1403
StyD4I CCNGG 2 cut(s) 492, 1424
StyI CCWWGG 1 cut(s) 283
TaaI ACNGT 5 cut(s) 749, 758, 1180, 1324, 1420
TaiI ACGT 2 cut(s) 1305, 1317
TaqII GACCGA 1 cut(s) 389
TatI WGTACW 2 cut(s) 382, 932
Tru1I TTAA 2 cut(s) 344, 1151
Tru9I TTAA 2 cut(s) 344, 1151
TscAI CASTG 2 cut(s) 1564, 1581
TseFI GTSAC 1 cut(s) 1555
TseI GCWGC 8 cut(s) 170, 464, 1079, 1349, 1358, 1373, 1396, 1451
Tsp45I GTSAC 1 cut(s) 1555
TspDTI ATGAA 1 cut(s) 1216
TspGWI ACGGA 1 cut(s) 411
TspRI CASTG 2 cut(s) 1564, 1581
Van91I CCANNNNNTGG 2 cut(s) 191, 978
XagI CCTNNNNNAGG 1 cut(s) 1130
XapI RAATTY 5 cut(s) 543, 823, 964, 1203, 1529
XceI RCATGY 1 cut(s) 1060
XcmI CCANNNNNNNNNTGG 3 cut(s) 1027, 1215, 1529
XspI CTAG 5 cut(s) 26, 725, 903, 1127, 1403
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.