pycom07g25110

Transporter

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
Physical Location & Seq
Reverse (-)
25544772 .. 25546597
1826 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g25110.3

Sequence Viewer

Length: 1644 bp
ATGGCAATGGCTTCTCCTGTCAAAGTGGTTCTTGGCTCGATTGCTTTTGCAGTCTTTTGGGTGTTGGCTGTGTTTCCGGCTGTCCCTTGCTTGCCAATCGGTAGGACTGCAGGGTCCCTCCTAGGGGCAATGCTTATGGTTGTTTTCCGAGTCTTACCTCCTGATCAAGCATACGCTGCGATTGATCTCCCAATCATTGGTCTTCTGTTCGGGACAATGGTTGTGAGTATCTATCTCGAAAGAGCAGATATGTTCAAGTATTTGGGCGAGTTGCTCATGTGGAAAACTCAAGGGGCAAAGGACTTGCTCTGTCGAATCTGTTTGATTTCTGCAGTTTCGAGCGCTCTCTTCACCAATGACACCGCTTGCGTGGTTTTGACCGAGTTTGTTTTGAAAGTTGCAAGACAACATAAACTCCCGCCTCATCCTTTCCTACTCGCCCTTGCCTCGAGTGCAAACATTGGGTCTGCAGCAACCCCGATTGGCAATCCTCAAAACCTTGTTATAGCTGTTCAGAGCAAGATATCTTTTGGGACATTTGTGATTGGAATTCTCCCTGCAATGCTTGTGGGAGTTTGTGTGAATGCTTTGATTCTTCTATGTATGTTCTGGAGATTGTTGTCCGTCCAGAAGGATGAGGAAGATCCAGCTCTGGAACCTGTTCCAGAGGAGGATGTAAGTTCTCATCGGTTTTCGCCAGCTACATTGTCACATAGTGCATCCTTAAACTCTCAAGAACTGAACTCTAGATTGGAAATCCCGACTCTGCAAAGTTCTCCGAATCTTGATGTGAGCATAGGTAATGTTGAGACTCTTAGAAATCGCTTACCTTCTAGCGAGAATGAAGTAAACAAGGTTCCTAGTGGCGCGATAGAGTCAGCAAGAATTTCAAGCGCATCAAAAGAGGAGACAAATGATTTGTCTTCTCATAAAAGGGACGAAACAATCCCATCAAAAAGGTCTCCATCGAACGATAGACAAACAGATGCAATTCCTACGGAGTTGTTGAAAGGGAAGGAACATCTGACGACAAGATGGAAAAGGATATTGTGGAAATCTGGTGTTTACCTTATTACTATAGGAATGCTGATTGCACTGCTTATGGGCCTCAATATGTCGTGGTGTGCGATTACTGCTGCACTTGCTCTGGTTGTTCTTGACTTCACGGATGCCCGTCCAAGCCTAGAAAAGGTTTCCTATTCACTCTTGATTTTCTTCTGCGGAATGTTTATAACCGTCAATGGATTCAACAAGACCGGCATTCCAAGCGATCTTTGGGACTTCATGGAGCCGCATGCGCAAATTGATCGTGCTAGCGGGATAGCAGTTCTTGCAGTCACCATACTTGTGCTGTCAAATTTGGCTTCAAATGTACCAACTGTTTTGTTGCTTGGAGGGCGGGTGGCAGCGTCGGCGGCCCTAATCTCTGCCGCGGAGGAGAAGAAGGCGTGGCTCCTATTAGCTTGGGTGAGCACCGTGGCCGGAAACCTGTCGCTTTTGGGATCAGCAGCCAACTTGATAGTGTGCGAGCAGGCTCGCCAATCTCCACAACTTGCCTACACATTGTCATTCTGGAGTCATCTGAAATTTGGAGTCCCCTCCACACTTATAGTTACTGCTATTGGTTTAACACTAATTAGATGA

Protein Analysis

548

Amino Acids

58.96

Weight (kDa)

7.07

Isoelectric Point (pI)

44.65

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1232
AasI GACNNNNNNGTC 1 cut(s) 112
Acc16I TGCGCA 1 cut(s) 1299
AccB7I CCANNNNNTGG 1 cut(s) 197
AccII CGCG 2 cut(s) 869, 1433
AciI CCGC 9 cut(s) 363, 419, 1221, 1292, 1317, 1399, 1415, 1431, 1433
AclWI GGATC 2 cut(s) 638, 1510
AcoI YGGCCR 1 cut(s) 1479
AcsI RAATTY 4 cut(s) 549, 885, 1357, 1586
AdeI CACNNNGTG 1 cut(s) 716
AfaI GTAC 1 cut(s) 1374
AfeI AGCGCT 1 cut(s) 343
AfiI CCNNNNNNNGG 4 cut(s) 123, 124, 197, 1189
AgsI TTSAA 6 cut(s) 256, 394, 891, 1009, 1249, 1368
AjuI GAANNNNNNNTTGG 2 cut(s) 734, 766
AluBI AGCT 4 cut(s) 509, 650, 701, 1463
AluI AGCT 4 cut(s) 509, 650, 701, 1463
Alw21I GWGCWC 1 cut(s) 1475
Alw26I GTCTC 3 cut(s) 803, 902, 966
AlwI GGATC 2 cut(s) 638, 1510
Ama87I CYCGRG 1 cut(s) 448
Aor51HI AGCGCT 1 cut(s) 343
AoxI GGCC 3 cut(s) 1105, 1416, 1479
ApeKI GCWGC 5 cut(s) 176, 470, 1136, 1406, 1508
ApoI RAATTY 4 cut(s) 549, 885, 1357, 1586
ArsI GACNNNNNNTTYG 6 cut(s) 449, 481, 901, 905, 933, 937
Asp700I GAANNNNTTC 1 cut(s) 660
AspA2I CCTAGG 1 cut(s) 121
AspLEI GCGC 4 cut(s) 344, 869, 896, 1300
AspS9I GGNCC 3 cut(s) 114, 1105, 1417
AsuHPI GGTGA 3 cut(s) 343, 1330, 1480
AsuNHI GCTAGC 1 cut(s) 1313
AvaI CYCGRG 1 cut(s) 448
AvaII GGWCC 1 cut(s) 114
AvrII CCTAGG 1 cut(s) 121
BbsI GAAGAC 2 cut(s) 194, 915
Bbv12I GWGCWC 1 cut(s) 1475
BbvI GCAGC 5 cut(s) 163, 482, 1123, 1418, 1520
BccI CCATC 3 cut(s) 958, 973, 1029
BcgI CGANNNNNNTGC 2 cut(s) 1289, 1323
BclI TGATCA 1 cut(s) 163
BcoDI GTCTC 3 cut(s) 803, 902, 966
BfaI CTAG 6 cut(s) 122, 747, 834, 861, 1184, 1314
BfmI CTRYAG 4 cut(s) 108, 330, 468, 1077
BfoI RGCGCY 1 cut(s) 345
BisI GCNGC 8 cut(s) 177, 471, 1137, 1292, 1407, 1416, 1431, 1509
BlnI CCTAGG 1 cut(s) 121
BlsI GCNGC 8 cut(s) 178, 472, 1138, 1293, 1408, 1417, 1432, 1510
Bme18I GGWCC 1 cut(s) 114
BmeT110I CYCGRG 1 cut(s) 448
BmgT120I GGNCC 3 cut(s) 114, 1105, 1417
BmiI GGNNCC 6 cut(s) 115, 116, 657, 858, 1290, 1454
BmsI GCATC 4 cut(s) 728, 905, 976, 1159
BmtI GCTAGC 1 cut(s) 1317
BpiI GAAGAC 2 cut(s) 194, 915
BpmI CTGGAG 2 cut(s) 631, 1594
BpuEI CTTGAG 2 cut(s) 273, 717
BsaI GGTCTC 1 cut(s) 966
BsaJI CCNNGG 3 cut(s) 121, 1431, 1476
BsaXI ACNNNNNCTCC 6 cut(s) 399, 429, 564, 594, 1386, 1416
Bsc4I CCNNNNNNNGG 4 cut(s) 123, 124, 197, 1189
Bse118I RCCGGY 1 cut(s) 1256
Bse3DI GCAATG 3 cut(s) 12, 135, 567
BseDI CCNNGG 3 cut(s) 121, 1431, 1476
BseGI GGATG 5 cut(s) 424, 640, 679, 719, 1174
BseLI CCNNNNNNNGG 4 cut(s) 123, 124, 197, 1189
BseMI GCAATG 3 cut(s) 12, 135, 567
BseRI GAGGAG 3 cut(s) 683, 920, 1451
BseXI GCAGC 5 cut(s) 163, 482, 1123, 1418, 1520
BsgI GTGCAG 1 cut(s) 1122
Bsh1236I CGCG 2 cut(s) 869, 1433
BshFI GGCC 3 cut(s) 1107, 1418, 1481
BsiHKAI GWGCWC 1 cut(s) 1475
BsiHKCI CYCGRG 1 cut(s) 448
BsiSI CCGG 3 cut(s) 77, 1257, 1482
BslFI GGGAC 7 cut(s) 68, 100, 226, 547, 950, 1292, 1580
BslI CCNNNNNNNGG 4 cut(s) 123, 124, 197, 1189
BsmAI GTCTC 3 cut(s) 803, 902, 966
BsmFI GGGAC 7 cut(s) 68, 100, 226, 547, 950, 1292, 1580
BsmI GAATGC 3 cut(s) 589, 1089, 1260
BsnI GGCC 3 cut(s) 1107, 1418, 1481
Bso31I GGTCTC 1 cut(s) 966
BsoBI CYCGRG 1 cut(s) 448
Bsp1286I GDGCHC 1 cut(s) 1475
Bsp143I GATC 6 cut(s) 163, 184, 643, 1270, 1306, 1502
BspACI CCGC 9 cut(s) 363, 419, 1221, 1292, 1317, 1399, 1415, 1431, 1433
BspANI GGCC 3 cut(s) 1107, 1418, 1481
BspFNI CGCG 2 cut(s) 869, 1433
BspLI GGNNCC 6 cut(s) 115, 116, 657, 858, 1290, 1454
BspMAI CTGCAG 3 cut(s) 112, 334, 472
BspOI GCTAGC 1 cut(s) 1317
BspPI GGATC 2 cut(s) 638, 1510
BspTNI GGTCTC 1 cut(s) 966
BsrDI GCAATG 3 cut(s) 12, 135, 567
BsrFI RCCGGY 1 cut(s) 1256
BssAI RCCGGY 1 cut(s) 1256
BssECI CCNNGG 3 cut(s) 121, 1431, 1476
BssMI GATC 6 cut(s) 163, 184, 643, 1270, 1306, 1502
BssT1I CCWWGG 1 cut(s) 121
Bst4CI ACNGT 3 cut(s) 1237, 1381, 1477
Bst6I CTCTTC 1 cut(s) 353
BstAPI GCANNNNNTGC 2 cut(s) 176, 1331
BstC8I GCNNGC 8 cut(s) 92, 367, 699, 1296, 1315, 1529, 1533, 1537
BstDEI CTNAG 1 cut(s) 815
BstDSI CCRYGG 2 cut(s) 1431, 1476
BstENI CCTNNNNNAGG 1 cut(s) 1187
BstF5I GGATG 5 cut(s) 424, 640, 679, 719, 1174
BstFNI CGCG 2 cut(s) 869, 1433
BstH2I RGCGCY 1 cut(s) 345
BstHHI GCGC 4 cut(s) 344, 869, 896, 1300
BstKTI GATC 6 cut(s) 166, 187, 646, 1273, 1309, 1505
BstMAI GTCTC 3 cut(s) 803, 902, 966
BstMBI GATC 6 cut(s) 163, 184, 643, 1270, 1306, 1502
BstNSI RCATGY 1 cut(s) 1298
BstSFI CTRYAG 4 cut(s) 108, 330, 468, 1077
BstUI CGCG 2 cut(s) 869, 1433
BstV1I GCAGC 5 cut(s) 163, 482, 1123, 1418, 1520
BstV2I GAAGAC 2 cut(s) 194, 915
BstX2I RGATCY 1 cut(s) 643
BstYI RGATCY 1 cut(s) 643
BsuRI GGCC 3 cut(s) 1107, 1418, 1481
BtgI CCRYGG 2 cut(s) 1431, 1476
BtsCI GGATG 5 cut(s) 424, 640, 679, 719, 1174
BtsI GCAGTG 1 cut(s) 1094
BtsIMutI CAGTG 1 cut(s) 1094
Cac8I GCNNGC 8 cut(s) 92, 367, 699, 1296, 1315, 1529, 1533, 1537
CfoI GCGC 4 cut(s) 344, 869, 896, 1300
Cfr10I RCCGGY 1 cut(s) 1256
Cfr13I GGNCC 3 cut(s) 114, 1105, 1417
Cfr42I CCGCGG 1 cut(s) 1434
CseI GACGC 1 cut(s) 1398
Csp6I GTAC 1 cut(s) 1373
CspCI CAANNNNNGTGG 2 cut(s) 549, 584
CviAII CATG 3 cut(s) 277, 1285, 1295
CviQI GTAC 1 cut(s) 1373
DdeI CTNAG 1 cut(s) 815
DpnI GATC 6 cut(s) 165, 186, 645, 1272, 1308, 1504
DpnII GATC 6 cut(s) 163, 184, 643, 1270, 1306, 1502
DraIII CACNNNGTG 1 cut(s) 716
DrdI GACNNNNNNGTC 1 cut(s) 112
DseDI GACNNNNNNGTC 1 cut(s) 112
EaeI YGGCCR 1 cut(s) 1479
Eam1104I CTCTTC 1 cut(s) 353
EarI CTCTTC 1 cut(s) 353
Eco130I CCWWGG 1 cut(s) 121
Eco31I GGTCTC 1 cut(s) 966
Eco32I GATATC 1 cut(s) 525
Eco47I GGWCC 1 cut(s) 114
Eco47III AGCGCT 1 cut(s) 343
Eco88I CYCGRG 1 cut(s) 448
EcoNI CCTNNNNNAGG 1 cut(s) 1187
EcoO109I RGGNCCY 1 cut(s) 114
EcoRI GAATTC 1 cut(s) 549
EcoRV GATATC 1 cut(s) 525
EcoT14I CCWWGG 1 cut(s) 121
ErhI CCWWGG 1 cut(s) 121
FaeI CATG 3 cut(s) 280, 1288, 1298
FalI AAGNNNNNCTT 2 cut(s) 15, 47
FaqI GGGAC 7 cut(s) 68, 100, 226, 547, 950, 1292, 1580
FatI CATG 3 cut(s) 276, 1284, 1294
FauI CCCGC 3 cut(s) 426, 1310, 1392
FbaI TGATCA 1 cut(s) 163
Fnu4HI GCNGC 8 cut(s) 177, 471, 1137, 1292, 1407, 1416, 1431, 1509
FokI GGATG 5 cut(s) 411, 647, 686, 706, 1181
Fsp4HI GCNGC 8 cut(s) 177, 471, 1137, 1292, 1407, 1416, 1431, 1509
FspBI CTAG 6 cut(s) 122, 747, 834, 861, 1184, 1314
FspI TGCGCA 1 cut(s) 1299
GlaI GCGC 4 cut(s) 343, 868, 895, 1299
GluI GCNGC 8 cut(s) 177, 471, 1137, 1292, 1407, 1416, 1431, 1509
GsuI CTGGAG 2 cut(s) 631, 1594
HaeII RGCGCY 1 cut(s) 345
HaeIII GGCC 3 cut(s) 1107, 1418, 1481
HapII CCGG 3 cut(s) 77, 1257, 1482
HgaI GACGC 1 cut(s) 1398
HhaI GCGC 4 cut(s) 344, 869, 896, 1300
Hin1II CATG 3 cut(s) 280, 1288, 1298
Hin6I GCGC 4 cut(s) 342, 867, 894, 1298
HinP1I GCGC 4 cut(s) 342, 867, 894, 1298
HpaII CCGG 3 cut(s) 77, 1257, 1482
HphI GGTGA 3 cut(s) 343, 1330, 1480
Hpy166II GTNNAC 2 cut(s) 850, 1066
Hpy188I TCNGA 5 cut(s) 149, 516, 780, 1026, 1584
Hpy8I GTNNAC 2 cut(s) 850, 1066
Hpy99I CGWCG 1 cut(s) 1414
HpyAV CCTTC 4 cut(s) 625, 840, 1009, 1438
HpyCH4III ACNGT 3 cut(s) 1237, 1381, 1477
HpyF3I CTNAG 1 cut(s) 815
Hsp92II CATG 3 cut(s) 280, 1288, 1298
HspAI GCGC 4 cut(s) 342, 867, 894, 1298
KflI GGGWCCC 1 cut(s) 114
Ksp22I TGATCA 1 cut(s) 163
KspI CCGCGG 1 cut(s) 1434
Kzo9I GATC 6 cut(s) 163, 184, 643, 1270, 1306, 1502
LmnI GCTCC 2 cut(s) 1288, 1458
Lsp1109I GCAGC 5 cut(s) 163, 482, 1123, 1418, 1520
LweI GCATC 4 cut(s) 728, 905, 976, 1159
MaeI CTAG 6 cut(s) 122, 747, 834, 861, 1184, 1314
MaeIII GTNAC 3 cut(s) 708, 1336, 1612
MalI GATC 6 cut(s) 165, 186, 645, 1272, 1308, 1504
MboI GATC 6 cut(s) 163, 184, 643, 1270, 1306, 1502
MboII GAAGA 7 cut(s) 194, 340, 587, 653, 915, 1207, 1453
MflI RGATCY 1 cut(s) 643
MhlI GDGCHC 1 cut(s) 1475
MluCI AATT 7 cut(s) 549, 885, 990, 1302, 1357, 1586, 1635
MlyI GAGTC 6 cut(s) 159, 757, 805, 884, 1585, 1602
MroXI GAANNNNTTC 1 cut(s) 660
MseI TTAA 2 cut(s) 725, 1628
MslI CAYNNNNRTG 1 cut(s) 1346
MspA1I CMGCKG 1 cut(s) 1433
MspI CCGG 3 cut(s) 77, 1257, 1482
Mva1269I GAATGC 3 cut(s) 589, 1089, 1260
MvnI CGCG 2 cut(s) 869, 1433
NdeII GATC 6 cut(s) 163, 184, 643, 1270, 1306, 1502
NheI GCTAGC 1 cut(s) 1313
NlaIII CATG 3 cut(s) 280, 1288, 1298
NlaIV GGNNCC 6 cut(s) 115, 116, 657, 858, 1290, 1454
NmuCI GTSAC 2 cut(s) 708, 1336
NsbI TGCGCA 1 cut(s) 1299
NspI RCATGY 1 cut(s) 1298
PaeI GCATGC 1 cut(s) 1298
PaeR7I CTCGAG 1 cut(s) 448
PcsI WCGNNNNNNNCGW 1 cut(s) 1124
PctI GAATGC 3 cut(s) 589, 1089, 1260
PdmI GAANNNNTTC 1 cut(s) 660
PfeI GAWTC 4 cut(s) 315, 592, 781, 1245
PflMI CCANNNNNTGG 1 cut(s) 197
PkrI GCNGC 8 cut(s) 178, 472, 1138, 1293, 1408, 1417, 1432, 1510
PleI GAGTC 6 cut(s) 158, 757, 805, 883, 1584, 1601
PpsI GAGTC 6 cut(s) 158, 757, 805, 883, 1584, 1601
PpuMI RGGWCCY 1 cut(s) 114
PsiI TTATAA 1 cut(s) 1232
Psp5II RGGWCCY 1 cut(s) 114
PspN4I GGNNCC 6 cut(s) 115, 116, 657, 858, 1290, 1454
PspPI GGNCC 3 cut(s) 114, 1105, 1417
PspPPI RGGWCCY 1 cut(s) 114
PspXI VCTCGAGB 1 cut(s) 448
PsrI GAACNNNNNNTAC 2 cut(s) 840, 872
PstI CTGCAG 3 cut(s) 112, 334, 472
PsuI RGATCY 1 cut(s) 643
RsaI GTAC 1 cut(s) 1374
RsaNI GTAC 1 cut(s) 1373
RseI CAYNNNNRTG 1 cut(s) 1346
SacII CCGCGG 1 cut(s) 1434
SaqAI TTAA 2 cut(s) 725, 1628
SatI GCNGC 8 cut(s) 177, 471, 1137, 1292, 1407, 1416, 1431, 1509
Sau3AI GATC 6 cut(s) 163, 184, 643, 1270, 1306, 1502
Sau96I GGNCC 3 cut(s) 114, 1105, 1417
SchI GAGTC 6 cut(s) 159, 757, 805, 884, 1585, 1602
SduI GDGCHC 1 cut(s) 1475
SfaNI GCATC 4 cut(s) 728, 905, 976, 1159
SfcI CTRYAG 4 cut(s) 108, 330, 468, 1077
Sfr274I CTCGAG 1 cut(s) 448
Sfr303I CCGCGG 1 cut(s) 1434
SgrBI CCGCGG 1 cut(s) 1434
SinI GGWCC 1 cut(s) 114
SlaI CTCGAG 1 cut(s) 448
SmiMI CAYNNNNRTG 1 cut(s) 1346
SmlI CTYRAG 3 cut(s) 288, 448, 732
SmoI CTYRAG 3 cut(s) 288, 448, 732
SphI GCATGC 1 cut(s) 1298
Sse9I AATT 7 cut(s) 549, 885, 990, 1302, 1357, 1586, 1635
SsiI CCGC 9 cut(s) 363, 419, 1221, 1292, 1317, 1399, 1415, 1431, 1433
SspMI CTAG 6 cut(s) 122, 747, 834, 861, 1184, 1314
StyI CCWWGG 1 cut(s) 121
TaaI ACNGT 3 cut(s) 1237, 1381, 1477
TaqI TCGA 6 cut(s) 38, 237, 313, 338, 449, 968
TaqII GACCGA 1 cut(s) 395
TasI AATT 7 cut(s) 549, 885, 990, 1302, 1357, 1586, 1635
TauI GCSGC 3 cut(s) 1294, 1418, 1433
TfiI GAWTC 4 cut(s) 315, 592, 781, 1245
Tru1I TTAA 2 cut(s) 725, 1628
Tru9I TTAA 2 cut(s) 725, 1628
TscAI CASTG 1 cut(s) 1101
TseFI GTSAC 2 cut(s) 708, 1336
TseI GCWGC 5 cut(s) 176, 470, 1136, 1406, 1508
Tsp45I GTSAC 2 cut(s) 708, 1336
TspDTI ATGAA 2 cut(s) 858, 1273
TspGWI ACGGA 3 cut(s) 613, 1013, 1181
TspRI CASTG 1 cut(s) 1101
Van91I CCANNNNNTGG 1 cut(s) 197
VpaK11BI GGWCC 1 cut(s) 114
XagI CCTNNNNNAGG 1 cut(s) 1187
XapI RAATTY 4 cut(s) 549, 885, 1357, 1586
XbaI TCTAGA 1 cut(s) 746
XceI RCATGY 1 cut(s) 1298
XcmI CCANNNNNNNNNTGG 1 cut(s) 1272
XhoI CTCGAG 1 cut(s) 448
XmaJI CCTAGG 1 cut(s) 121
XmnI GAANNNNTTC 1 cut(s) 660
XspI CTAG 6 cut(s) 122, 747, 834, 861, 1184, 1314
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.