FvH4_7g30980

Belongs to the mitochondrial carrier (TC 2.A.29) family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
Physical Location & Seq
Forward (+)
22456082 .. 22461019
4938 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g30980.t2

Sequence Viewer

Length: 1263 bp
ATGGTGGAGTTGGAGAAGAATCCTTGGGTGAGTAGTGAGCGACAAATCGACCGAGTTGAAATCGACGGTAAGGATTTGTCCATCATCATGCCGGAGCTTTCGGTTTTGGATAGAGGCGACGCCGGATTCGTCGCTGTGGCGAAGCGGCCGGACGGCGGCGAGAGGTGTAAGACGACGTCGGATTGGAAGCTCGGGGTTGCGGAACGAGCTTTCTCCGCCGCCGGCGCCGCGTTTCTGTCCGCGATTATCGTTAATCCGCTTGATGTAGCCAAGACGAGGTTGCAAGCGCAGGCAGCTGGCGTGCCTTACTCGCATCCGCTGAGTAATATCACGAGTCGGATGGCTTTTTTCGGGCCTACCACGCTGTTTGCGGATTTAAGGTGTTCGCCGTCGTGCACACGTGCTGGAATTCATGGTACCGTATCAATATGCCCACCAGATTGTTTTCAGTACAAAGGCACACTAGATGTTTTCGGCAAAATCATTCGGCAGGAAGGGTTCGCAAGGTTATGGAGAGGTACAAATGCAGGATTGGCCCTCGCGGTTCCAACAGTGGGAATCTATCTACCGTGCTATGACATTTTTCGCAACTGGTTAGAGGAATTCACTGCCCGTCATGCTCCCAGCACAACTGTATATGTTCCTTTAGTTGCTGGCTCTTTGGCACGCTCATTAGCTTGTGCAACTTGCTATCCTATAGAACTTGCTAGAACTCGCATGCAGGCATTTAAAGTGATGCAAAATGGTGCAAAGCCTCCTGGTGTCTTGAAAACTCTATTGAATGTTGTCTCTCAAGTCAAGACAACAAGTAATAATGCTGAAAGCAACTTAAGAGGCTATCGTGTCCTCTGGACTGGTATGGGAGCACAACTTGCTCGTGATGTTCCCTACTCTGCAATCTGTTGGGCAACTCTTGAGCCTATCAGGAGAAGACTTCTAAATATTGTAGGTGATGAAGCAAATGCGGTCAGTATCTTTGGGGCAAATTTTTCAGCTGGTTTTGTTGCAGGAACCATTGCTGCTGCAGCTACATGTCCATTGGATGTTGCAAAGACCCGAAGACAAATAGAGAACGATCCAGTCAGGCAACTGAAAATGACAACAAGGCAAACACTAATGGAGATTTGGAGGAGTGGAGGACTCAAGGGACTATTCACAGGGGTTGGCCCTCGTGTTGGTCGTGCTGGCCCTTCGGTTGGGATTGTTGTTTCCTTCTATGAAGTCGTGAAGTATGCTCTACATCAACGGCGTGCAACTTCATGA

Protein Analysis

421

Amino Acids

45.56

Weight (kDa)

9.57

Isoelectric Point (pI)

36.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Mito_carr PF00153 65 - 200 7e-15 Mitochondrial carrier protein
Mito_carr PF00153 211 - 306 2.1e-11 Mitochondrial carrier protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 179
Acc65I GGTACC 1 cut(s) 416
AccB1I GGYRCC 2 cut(s) 224, 416
AccII CGCG 3 cut(s) 230, 242, 542
AclWI GGATC 1 cut(s) 1070
AcoI YGGCCR 1 cut(s) 146
AcsI RAATTY 3 cut(s) 408, 602, 985
AcvI CACGTG 1 cut(s) 401
AcyI GRCGYC 3 cut(s) 120, 176, 225
AfaI GTAC 3 cut(s) 418, 452, 520
AfiI CCNNNNNNNGG 5 cut(s) 155, 276, 554, 1175, 1196
AflII CTTAAG 1 cut(s) 829
AflIII ACRYGT 2 cut(s) 398, 1031
AgsI TTSAA 3 cut(s) 59, 769, 781
AjnI CCWGG 1 cut(s) 757
AluBI AGCT 7 cut(s) 97, 190, 209, 296, 677, 995, 1028
AluI AGCT 7 cut(s) 97, 190, 209, 296, 677, 995, 1028
Alw21I GWGCWC 2 cut(s) 398, 868
Alw26I GTCTC 1 cut(s) 793
Alw44I GTGCAC 1 cut(s) 394
AlwI GGATC 1 cut(s) 1070
Ama87I CYCGRG 1 cut(s) 191
AoxI GGCC 5 cut(s) 146, 353, 534, 1165, 1186
ApaLI GTGCAC 1 cut(s) 394
ApeKI GCWGC 4 cut(s) 293, 1019, 1022, 1025
ApoI RAATTY 3 cut(s) 408, 602, 985
ArsI GACNNNNNNTTYG 2 cut(s) 110, 142
Asp718I GGTACC 1 cut(s) 416
AspLEI GCGC 2 cut(s) 227, 289
AspS9I GGNCC 4 cut(s) 353, 535, 1166, 1187
AsuHPI GGTGA 2 cut(s) 40, 962
AvaI CYCGRG 1 cut(s) 191
BaeGI GKGCMC 1 cut(s) 398
BanI GGYRCC 2 cut(s) 224, 416
BauI CACGAG 3 cut(s) 331, 876, 1170
BbrPI CACGTG 1 cut(s) 401
BbsI GAAGAC 2 cut(s) 937, 1066
Bbv12I GWGCWC 2 cut(s) 398, 868
BbvI GCAGC 4 cut(s) 305, 1006, 1009, 1037
BccI CCATC 2 cut(s) 89, 334
BceAI ACGGC 2 cut(s) 169, 373
BciT130I CCWGG 1 cut(s) 759
BcoDI GTCTC 1 cut(s) 793
BfaI CTAG 2 cut(s) 464, 708
BfmI CTRYAG 2 cut(s) 696, 1023
BfoI RGCGCY 1 cut(s) 228
BfrI CTTAAG 1 cut(s) 829
BisI GCNGC 8 cut(s) 146, 157, 219, 228, 294, 1020, 1023, 1026
BlsI GCNGC 8 cut(s) 147, 158, 220, 229, 295, 1021, 1024, 1027
Bme1390I CCNGG 1 cut(s) 759
BmeT110I CYCGRG 1 cut(s) 191
BmgT120I GGNCC 4 cut(s) 353, 535, 1166, 1187
BmiI GGNNCC 4 cut(s) 226, 418, 546, 1012
BmrFI CCNGG 1 cut(s) 759
BmsI GCATC 2 cut(s) 322, 726
BpiI GAAGAC 2 cut(s) 937, 1066
BpuEI CTTGAG 3 cut(s) 777, 935, 1127
BsaAI YACGTR 1 cut(s) 401
BsaHI GRCGYC 3 cut(s) 120, 176, 225
BsaJI CCNNGG 1 cut(s) 23
Bsc4I CCNNNNNNNGG 5 cut(s) 155, 276, 554, 1175, 1196
Bse118I RCCGGY 1 cut(s) 221
Bse1I ACTGG 3 cut(s) 596, 859, 1079
Bse3DI GCAATG 1 cut(s) 1014
BseBI CCWGG 1 cut(s) 759
BseDI CCNNGG 1 cut(s) 23
BseGI GGATG 3 cut(s) 313, 345, 1048
BseLI CCNNNNNNNGG 5 cut(s) 155, 276, 554, 1175, 1196
BseMI GCAATG 1 cut(s) 1014
BseMII CTCAG 1 cut(s) 311
BseNI ACTGG 3 cut(s) 596, 859, 1079
BseRI GAGGAG 1 cut(s) 1144
BseSI GKGCMC 1 cut(s) 398
BseX3I CGGCCG 1 cut(s) 146
BseXI GCAGC 4 cut(s) 305, 1006, 1009, 1037
BseYI CCCAGC 1 cut(s) 623
Bsh1236I CGCG 3 cut(s) 230, 242, 542
Bsh1285I CGRYCG 2 cut(s) 52, 149
BshFI GGCC 5 cut(s) 148, 355, 536, 1167, 1188
BshNI GGYRCC 2 cut(s) 224, 416
BsiEI CGRYCG 2 cut(s) 52, 149
BsiHKAI GWGCWC 2 cut(s) 398, 868
BsiHKCI CYCGRG 1 cut(s) 191
BsiSI CCGG 4 cut(s) 92, 123, 149, 222
BslFI GGGAC 1 cut(s) 1161
BslI CCNNNNNNNGG 5 cut(s) 155, 276, 554, 1175, 1196
BsmAI GTCTC 1 cut(s) 793
BsmFI GGGAC 1 cut(s) 1161
BsnI GGCC 5 cut(s) 148, 355, 536, 1167, 1188
BsoBI CYCGRG 1 cut(s) 191
Bsp1286I GDGCHC 2 cut(s) 398, 868
Bsp143I GATC 1 cut(s) 1075
BspANI GGCC 5 cut(s) 148, 355, 536, 1167, 1188
BspCNI CTCAG 1 cut(s) 312
BspFNI CGCG 3 cut(s) 230, 242, 542
BspHI TCATGA 1 cut(s) 1259
BspLI GGNNCC 4 cut(s) 226, 418, 546, 1012
BspMAI CTGCAG 1 cut(s) 1027
BspPI GGATC 1 cut(s) 1070
BspT107I GGYRCC 2 cut(s) 224, 416
BspTI CTTAAG 1 cut(s) 829
BsrDI GCAATG 1 cut(s) 1014
BsrFI RCCGGY 1 cut(s) 221
BsrI ACTGG 3 cut(s) 596, 859, 1079
BssAI RCCGGY 1 cut(s) 221
BssECI CCNNGG 1 cut(s) 23
BssMI GATC 1 cut(s) 1075
BssNI GRCGYC 3 cut(s) 120, 176, 225
BssSI CACGAG 3 cut(s) 331, 876, 1170
BssT1I CCWWGG 1 cut(s) 23
Bst2BI CACGAG 3 cut(s) 331, 876, 1170
Bst2UI CCWGG 1 cut(s) 759
Bst4CI ACNGT 5 cut(s) 68, 421, 553, 570, 634
BstACI GRCGYC 3 cut(s) 120, 176, 225
BstAFI CTTAAG 1 cut(s) 829
BstAPI GCANNNNNTGC 1 cut(s) 872
BstBAI YACGTR 1 cut(s) 401
BstDEI CTNAG 1 cut(s) 320
BstF5I GGATG 3 cut(s) 313, 345, 1048
BstFNI CGCG 3 cut(s) 230, 242, 542
BstH2I RGCGCY 1 cut(s) 228
BstHHI GCGC 2 cut(s) 227, 289
BstKTI GATC 1 cut(s) 1078
BstMAI GTCTC 1 cut(s) 793
BstMBI GATC 1 cut(s) 1075
BstMCI CGRYCG 2 cut(s) 52, 149
BstNI CCWGG 1 cut(s) 759
BstNSI RCATGY 2 cut(s) 721, 1035
BstSCI CCNGG 1 cut(s) 757
BstSFI CTRYAG 2 cut(s) 696, 1023
BstSLI GKGCMC 1 cut(s) 398
BstUI CGCG 3 cut(s) 230, 242, 542
BstV1I GCAGC 4 cut(s) 305, 1006, 1009, 1037
BstV2I GAAGAC 2 cut(s) 937, 1066
BstZI CGGCCG 1 cut(s) 146
BsuRI GGCC 5 cut(s) 148, 355, 536, 1167, 1188
BtsCI GGATG 3 cut(s) 313, 345, 1048
BtsI GCAGTG 1 cut(s) 606
BtsIMutI CAGTG 2 cut(s) 558, 606
CciI TCATGA 1 cut(s) 1259
CfoI GCGC 2 cut(s) 227, 289
Cfr10I RCCGGY 1 cut(s) 221
Cfr13I GGNCC 4 cut(s) 353, 535, 1166, 1187
CseI GACGC 1 cut(s) 128
Csp6I GTAC 3 cut(s) 417, 451, 519
CspCI CAANNNNNGTGG 2 cut(s) 349, 384
CviAII CATG 6 cut(s) 88, 413, 617, 718, 1032, 1260
CviQI GTAC 3 cut(s) 417, 451, 519
DdeI CTNAG 1 cut(s) 320
DinI GGCGCC 1 cut(s) 226
DpnI GATC 1 cut(s) 1077
DpnII GATC 1 cut(s) 1075
DraI TTTAAA 1 cut(s) 730
EaeI YGGCCR 1 cut(s) 146
EagI CGGCCG 1 cut(s) 146
EciI GGCGGA 1 cut(s) 205
EclXI CGGCCG 1 cut(s) 146
Eco130I CCWWGG 1 cut(s) 23
Eco52I CGGCCG 1 cut(s) 146
Eco72I CACGTG 1 cut(s) 401
Eco88I CYCGRG 1 cut(s) 191
EcoRI GAATTC 2 cut(s) 408, 602
EcoRII CCWGG 1 cut(s) 757
EcoT14I CCWWGG 1 cut(s) 23
EgeI GGCGCC 1 cut(s) 226
EheI GGCGCC 1 cut(s) 226
ErhI CCWWGG 1 cut(s) 23
FaeI CATG 6 cut(s) 91, 416, 620, 721, 1035, 1263
FaqI GGGAC 1 cut(s) 1161
FatI CATG 6 cut(s) 87, 412, 616, 717, 1031, 1259
Fnu4HI GCNGC 8 cut(s) 146, 157, 219, 228, 294, 1020, 1023, 1026
FokI GGATG 3 cut(s) 300, 352, 1055
Fsp4HI GCNGC 8 cut(s) 146, 157, 219, 228, 294, 1020, 1023, 1026
FspBI CTAG 2 cut(s) 464, 708
GlaI GCGC 2 cut(s) 226, 288
GluI GCNGC 8 cut(s) 146, 157, 219, 228, 294, 1020, 1023, 1026
GsaI CCCAGC 1 cut(s) 627
HaeII RGCGCY 1 cut(s) 228
HaeIII GGCC 5 cut(s) 148, 355, 536, 1167, 1188
HapII CCGG 4 cut(s) 92, 123, 149, 222
HgaI GACGC 1 cut(s) 128
HhaI GCGC 2 cut(s) 227, 289
Hin1I GRCGYC 3 cut(s) 120, 176, 225
Hin1II CATG 6 cut(s) 91, 416, 620, 721, 1035, 1263
Hin6I GCGC 2 cut(s) 225, 287
HinP1I GCGC 2 cut(s) 225, 287
HinfI GANTC 5 cut(s) 19, 126, 334, 558, 1140
HpaII CCGG 4 cut(s) 92, 123, 149, 222
HphI GGTGA 2 cut(s) 40, 962
Hpy166II GTNNAC 1 cut(s) 396
Hpy188I TCNGA 2 cut(s) 181, 339
Hpy188III TCNNGA 9 cut(s) 331, 766, 799, 850, 878, 914, 925, 1225, 1260
Hpy8I GTNNAC 1 cut(s) 396
Hpy99I CGWCG 6 cut(s) 68, 122, 134, 178, 181, 394
HpyAV CCTTC 3 cut(s) 488, 1200, 1222
HpyCH4III ACNGT 5 cut(s) 68, 421, 553, 570, 634
HpyCH4IV ACGT 2 cut(s) 176, 400
HpyF3I CTNAG 1 cut(s) 320
HpySE526I ACGT 2 cut(s) 176, 400
Hsp92I GRCGYC 3 cut(s) 120, 176, 225
Hsp92II CATG 6 cut(s) 91, 416, 620, 721, 1035, 1263
HspAI GCGC 2 cut(s) 225, 287
KasI GGCGCC 1 cut(s) 224
KpnI GGTACC 1 cut(s) 420
KroI GCCGGC 1 cut(s) 221
KroNI GCCGGC 1 cut(s) 223
Kzo9I GATC 1 cut(s) 1075
LmnI GCTCC 3 cut(s) 94, 625, 863
Lsp1109I GCAGC 4 cut(s) 305, 1006, 1009, 1037
LweI GCATC 2 cut(s) 322, 726
MaeI CTAG 2 cut(s) 464, 708
MaeII ACGT 2 cut(s) 176, 400
MalI GATC 1 cut(s) 1077
MboI GATC 1 cut(s) 1075
MboII GAAGA 3 cut(s) 28, 942, 1071
MhlI GDGCHC 2 cut(s) 398, 868
MluCI AATT 3 cut(s) 408, 602, 985
Mly113I GGCGCC 1 cut(s) 225
MlyI GAGTC 2 cut(s) 343, 1134
MmeI TCCRAC 3 cut(s) 159, 317, 572
MreI CGCCGGCG 1 cut(s) 221
MroNI GCCGGC 1 cut(s) 221
MseI TTAA 4 cut(s) 252, 377, 729, 830
MslI CAYNNNNRTG 1 cut(s) 86
MspA1I CMGCKG 3 cut(s) 296, 319, 995
MspCI CTTAAG 1 cut(s) 829
MspI CCGG 4 cut(s) 92, 123, 149, 222
MspR9I CCNGG 1 cut(s) 759
MvaI CCWGG 1 cut(s) 759
MvnI CGCG 3 cut(s) 230, 242, 542
NaeI GCCGGC 1 cut(s) 223
NarI GGCGCC 1 cut(s) 225
NdeII GATC 1 cut(s) 1075
NgoMIV GCCGGC 1 cut(s) 221
NlaIII CATG 6 cut(s) 91, 416, 620, 721, 1035, 1263
NlaIV GGNNCC 4 cut(s) 226, 418, 546, 1012
NspI RCATGY 2 cut(s) 721, 1035
PaeI GCATGC 1 cut(s) 721
PagI TCATGA 1 cut(s) 1259
PciI ACATGT 1 cut(s) 1031
PcsI WCGNNNNNNNCGW 2 cut(s) 126, 1177
PdiI GCCGGC 1 cut(s) 223
PfeI GAWTC 3 cut(s) 19, 126, 558
PflFI GACNNNGTC 1 cut(s) 175
PkrI GCNGC 8 cut(s) 147, 158, 220, 229, 295, 1021, 1024, 1027
PleI GAGTC 2 cut(s) 342, 1134
PluTI GGCGCC 1 cut(s) 228
PmaCI CACGTG 1 cut(s) 401
PmlI CACGTG 1 cut(s) 401
PpsI GAGTC 2 cut(s) 342, 1134
Ppu21I YACGTR 1 cut(s) 401
PscI ACATGT 1 cut(s) 1031
Psp6I CCWGG 1 cut(s) 757
PspCI CACGTG 1 cut(s) 401
PspFI CCCAGC 1 cut(s) 623
PspGI CCWGG 1 cut(s) 757
PspN4I GGNNCC 4 cut(s) 226, 418, 546, 1012
PspPI GGNCC 4 cut(s) 353, 535, 1166, 1187
PstI CTGCAG 1 cut(s) 1027
PsyI GACNNNGTC 1 cut(s) 175
PvuII CAGCTG 2 cut(s) 296, 995
RsaI GTAC 3 cut(s) 418, 452, 520
RsaNI GTAC 3 cut(s) 417, 451, 519
RseI CAYNNNNRTG 1 cut(s) 86
SaqAI TTAA 4 cut(s) 252, 377, 729, 830
SatI GCNGC 8 cut(s) 146, 157, 219, 228, 294, 1020, 1023, 1026
Sau3AI GATC 1 cut(s) 1075
Sau96I GGNCC 4 cut(s) 353, 535, 1166, 1187
SchI GAGTC 2 cut(s) 343, 1134
ScrFI CCNGG 1 cut(s) 759
SduI GDGCHC 2 cut(s) 398, 868
SfaNI GCATC 2 cut(s) 322, 726
SfcI CTRYAG 2 cut(s) 696, 1023
SfoI GGCGCC 1 cut(s) 226
SgrAI CRCCGGYG 1 cut(s) 221
SmiMI CAYNNNNRTG 1 cut(s) 86
SmlI CTYRAG 4 cut(s) 792, 829, 914, 1142
SmoI CTYRAG 4 cut(s) 792, 829, 914, 1142
SphI GCATGC 1 cut(s) 721
Sse9I AATT 3 cut(s) 408, 602, 985
SspDI GGCGCC 1 cut(s) 224
SspI AATATT 1 cut(s) 943
SspMI CTAG 2 cut(s) 464, 708
StyD4I CCNGG 1 cut(s) 757
StyI CCWWGG 1 cut(s) 23
TaaI ACNGT 5 cut(s) 68, 421, 553, 570, 634
TaiI ACGT 2 cut(s) 179, 403
TaqI TCGA 2 cut(s) 48, 63
TaqII GACCGA 1 cut(s) 66
TasI AATT 3 cut(s) 408, 602, 985
TatI WGTACW 1 cut(s) 450
TauI GCSGC 4 cut(s) 148, 159, 221, 230
TfiI GAWTC 3 cut(s) 19, 126, 558
Tru1I TTAA 4 cut(s) 252, 377, 729, 830
Tru9I TTAA 4 cut(s) 252, 377, 729, 830
TscAI CASTG 2 cut(s) 558, 613
TseI GCWGC 4 cut(s) 293, 1019, 1022, 1025
TspDTI ATGAA 4 cut(s) 401, 969, 1233, 1248
TspRI CASTG 2 cut(s) 558, 613
Tth111I GACNNNGTC 1 cut(s) 175
Vha464I CTTAAG 1 cut(s) 829
VneI GTGCAC 1 cut(s) 394
XapI RAATTY 3 cut(s) 408, 602, 985
XceI RCATGY 2 cut(s) 721, 1035
XspI CTAG 2 cut(s) 464, 708
ZraI GACGTC 1 cut(s) 177
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.