Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0008269

Physical Location & Seq

Genomic Coordinates Reverse (-)

2446279 .. 2450032

Gene Structure 3754 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00279750.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1284 bp

ATGGTGGAGTTGGAGAGGGCGCAGAATCCTTGGGTGAGTAGTAGTGACGAGCAGCAAATCGACCGAGTTGAAATCGACGGTAGAGATTTGTCCATCATGCCGGAGCTGTCGGTTTTGGACAGAGGAGACGCCGGATTCGCAAGGCGGGACGGCGAGAGGTGTAAAACGACGTCGGATTGGAAGCTAGGGGTTGCGGAGCGAGCTTTCTCGGCCGCCGGCGCCGCGTTTTTGTCTGCCATTATTGTTAATCCACTTGATGTGGCCAAGACGAGGTTGCAAGCTCAGGCAGCTGGTGTGCCTTACTCGCATCCGCTAAATCTAAGGTGTTCACCTTCGTGCACACGTGCTGGAATTCATGGTACTGTATCAATATGCCCACCAGATTGTTTTCAGTACAAAGGCACACTGGATGTTTTCTACAAAATCATTCGACAGGAATTTGATATTGCAGGAAGGGTCGAGCTTGCAAGGTTATGGAGAGGCACAAATGCAGGATTGGCACTGGGGGGACTATTCCAACAGTGGGTGGGAATCTATCTACCATGCTATGACATATTTCGAAACTGGTTAGAAGAATTCACTGCCCGTAATGCTCCCAGCACGAGTATATATGTTCCTTTAGTTGCTGGCTCTTTGGCACGCTCATTAGCTTGTGCAACTTGCTATCCTATTGAACTTGCTAGAACTCGCATGCAGGCATTTAAAGTGATACAAAATGGTGCAAAGCCTCCTGGTGTTTTGAGGACTCTATTGGACGTTGTCTCTCATGTCAAGACCACAAGTAATGCTGAAAGCAACTTAAGAGGCTATCGTGTCCTCTGGACCGGCATGGGAGCACAACTTGCTCGTGATGTTCCCTACTCTGCAATCTGTTGGTCGACTCTCGAGCCAATCAGAAGAAGACTTCTTAATCTTGTGGGTGATGAAGCAAATGCAGTCAGTATCTTTGGGGCAAATTTTTCTGCTGGTTTTGTTGCAGGAACCATTGCGGCTGCAGCTACATGTCCATTGGATGTTGCAAAGACCCGAAGACAGATAGAGAACGATCCAGTCAGGCAAATGAAAATGACGACAAGGCAAACGCTAATGGAGGTTTGGAGGGGTGGAGGACTAAAGGGACTATTCACAGGGGTCGGTCCTCGTGTTGGTCGTGCAGGCCCTTCGGTAGGGATCGTTGTTTCCTTCTATGAAGTCGTGAAGTATGCTCTACATCAACGGTTGCAAGTGCAGGATTTAACCTTCTTTCCTACAGTTTTAGCTGTTCTTTACGTTGTTGCTCAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000041 GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0006810 GO:0006811 GO:0006812 GO:0006828 GO:0006839 GO:0006950 GO:0008150 GO:0009635 GO:0009636 GO:0010033 GO:0016020 GO:0016021 GO:0016530 GO:0019866 GO:0022857 GO:0030001 GO:0031090 GO:0031224 GO:0031966 GO:0031967 GO:0031975 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0140104 GO:1901562

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Mito_carr

Protein Analysis

427

Amino Acids

46.79

Weight (kDa)

9.16

Isoelectric Point (pI)

36.06

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Mito_carr	PF00153	63 - 191	1e-06	Mitochondrial carrier protein
Mito_carr	PF00153	202 - 303	6e-12	Mitochondrial carrier protein
Mito_carr	PF00153	316 - 405	4e-18	Mitochondrial carrier protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008269)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G27940
fragaria_vesca	FvH4_7g30980 FvH4_7g30980
malus_domestica	MD01G1214800.v1.1 MD07G1284500.v1.1
prunus_persica	Prupe.2G306700_v2.0.a1 Prupe.2G306700_v2.0.a1 Prupe.2G306700_v2.0.a1
pyrus_communis	pycom01g22560 pycom07g25840
rosa_chinensis	RchiOBHm_Chr1g0380061
rosa_laevigata	RLG00000026335
rosa_multiflora	Rmu_sc0001232.1_g000004 Rmu_sc0004184.1_g000004
rosa_roxburghii	Rroxscaffold_4G00279750
rosa_rugosa	Rorug01G0417000 Rorug01G0417100 Rorug01G0417200
rosa_samantha	Rh1AG441600 Rh1BG397200 Rh1CG410500 Rh1DG428000
rosa_wichuraiana	Rw1G038390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	173
AccB1I	GGYRCC	1 cut(s)	218
AccI	GTMKAC	1 cut(s)	878
AccII	CGCG	1 cut(s)	224
AciI	CCGC	6 cut(s)	145, 194, 213, 222, 311, 989
AclWI	GGATC	2 cut(s)	1040, 1178
AcoI	YGGCCR	2 cut(s)	210, 261
AcsI	RAATTY	4 cut(s)	351, 437, 575, 955
AcvI	CACGTG	1 cut(s)	344
AcyI	GRCGYC	3 cut(s)	129, 170, 219
AfaI	GTAC	2 cut(s)	361, 395
AfiI	CCNNNNNNNGG	4 cut(s)	270, 523, 1145, 1166
AflII	CTTAAG	1 cut(s)	799
AflIII	ACRYGT	2 cut(s)	341, 1001
AgsI	TTSAA	2 cut(s)	71, 674
AjnI	CCWGG	1 cut(s)	730
AleI	CACNNNNGTG	1 cut(s)	334
AluBI	AGCT	9 cut(s)	106, 184, 203, 281, 290, 463, 650, 998, 1259
AluI	AGCT	9 cut(s)	106, 184, 203, 281, 290, 463, 650, 998, 1259
Alw21I	GWGCWC	2 cut(s)	341, 838
Alw26I	GTCTC	2 cut(s)	120, 766
Alw44I	GTGCAC	1 cut(s)	337
AlwI	GGATC	2 cut(s)	1040, 1178
Ama87I	CYCGRG	1 cut(s)	884
AoxI	GGCC	3 cut(s)	210, 261, 1156
ApaLI	GTGCAC	1 cut(s)	337
ApeKI	GCWGC	4 cut(s)	52, 287, 992, 995
ApoI	RAATTY	4 cut(s)	351, 437, 575, 955
ArsI	GACNNNNNNTTYG	2 cut(s)	119, 151
AspLEI	GCGC	2 cut(s)	22, 221
AspS9I	GGNCC	3 cut(s)	822, 1136, 1157
AsuHPI	GGTGA	3 cut(s)	46, 321, 932
AsuII	TTCGAA	1 cut(s)	559
AvaI	CYCGRG	1 cut(s)	884
AvaII	GGWCC	2 cut(s)	822, 1136
BaeGI	GKGCMC	1 cut(s)	341
BalI	TGGCCA	1 cut(s)	263
BanI	GGYRCC	1 cut(s)	218
BauI	CACGAG	3 cut(s)	601, 846, 1140
BbrPI	CACGTG	1 cut(s)	344
BbsI	GAAGAC	2 cut(s)	907, 1036
Bbv12I	GWGCWC	2 cut(s)	341, 838
BbvI	GCAGC	4 cut(s)	64, 299, 979, 1007
BccI	CCATC	1 cut(s)	101
BceAI	ACGGC	1 cut(s)	166
BcgI	CGANNNNNNTGC	2 cut(s)	1143, 1177
BciT130I	CCWGG	1 cut(s)	732
BcoDI	GTCTC	2 cut(s)	120, 766
BfaI	CTAG	2 cut(s)	185, 681
BfmI	CTRYAG	2 cut(s)	993, 1248
BfoI	RGCGCY	1 cut(s)	222
BfrI	CTTAAG	1 cut(s)	799
BisI	GCNGC	7 cut(s)	53, 213, 222, 288, 990, 993, 996
BlsI	GCNGC	7 cut(s)	54, 214, 223, 289, 991, 994, 997
Bme1390I	CCNGG	1 cut(s)	732
Bme18I	GGWCC	2 cut(s)	822, 1136
BmeT110I	CYCGRG	1 cut(s)	884
BmgT120I	GGNCC	3 cut(s)	822, 1136, 1157
BmiI	GGNNCC	2 cut(s)	220, 982
BmrFI	CCNGG	1 cut(s)	732
BmrI	ACTGGG	1 cut(s)	512
BmsI	GCATC	1 cut(s)	316
BmuI	ACTGGG	1 cut(s)	512
BpiI	GAAGAC	2 cut(s)	907, 1036
Bpu10I	CCTNAGC	1 cut(s)	282
Bpu14I	TTCGAA	1 cut(s)	559
BsaAI	YACGTR	1 cut(s)	344
BsaHI	GRCGYC	3 cut(s)	129, 170, 219
BsaJI	CCNNGG	1 cut(s)	29
Bsc4I	CCNNNNNNNGG	4 cut(s)	270, 523, 1145, 1166
Bse118I	RCCGGY	2 cut(s)	215, 824
Bse1I	ACTGG	4 cut(s)	411, 507, 569, 1049
Bse3DI	GCAATG	1 cut(s)	984
BseBI	CCWGG	1 cut(s)	732
BseDI	CCNNGG	1 cut(s)	29
BseGI	GGATG	3 cut(s)	307, 415, 1018
BseLI	CCNNNNNNNGG	4 cut(s)	270, 523, 1145, 1166
BseMI	GCAATG	1 cut(s)	984
BseMII	CTCAG	1 cut(s)	296
BseNI	ACTGG	4 cut(s)	411, 507, 569, 1049
BseRI	GAGGAG	1 cut(s)	138
BseSI	GKGCMC	1 cut(s)	341
BseX3I	CGGCCG	1 cut(s)	210
BseXI	GCAGC	4 cut(s)	64, 299, 979, 1007
BseYI	CCCAGC	1 cut(s)	596
BsgI	GTGCAG	2 cut(s)	1173, 1247
Bsh1236I	CGCG	1 cut(s)	224
Bsh1285I	CGRYCG	2 cut(s)	64, 213
BshFI	GGCC	3 cut(s)	212, 263, 1158
BshNI	GGYRCC	1 cut(s)	218
BsiEI	CGRYCG	2 cut(s)	64, 213
BsiHKAI	GWGCWC	2 cut(s)	341, 838
BsiHKCI	CYCGRG	1 cut(s)	884
BsiSI	CCGG	4 cut(s)	101, 132, 216, 825
BslFI	GGGAC	3 cut(s)	161, 522, 1131
BslI	CCNNNNNNNGG	4 cut(s)	270, 523, 1145, 1166
BsmAI	GTCTC	2 cut(s)	120, 766
BsmBI	CGTCTC	1 cut(s)	120
BsmFI	GGGAC	3 cut(s)	161, 522, 1131
BsnI	GGCC	3 cut(s)	212, 263, 1158
BsoBI	CYCGRG	1 cut(s)	884
Bsp119I	TTCGAA	1 cut(s)	559
Bsp1286I	GDGCHC	2 cut(s)	341, 838
Bsp143I	GATC	2 cut(s)	1045, 1170
BspACI	CCGC	6 cut(s)	145, 194, 213, 222, 311, 989
BspANI	GGCC	3 cut(s)	212, 263, 1158
BspCNI	CTCAG	1 cut(s)	295
BspFNI	CGCG	1 cut(s)	224
BspLI	GGNNCC	2 cut(s)	220, 982
BspMAI	CTGCAG	1 cut(s)	997
BspPI	GGATC	2 cut(s)	1040, 1178
BspT104I	TTCGAA	1 cut(s)	559
BspT107I	GGYRCC	1 cut(s)	218
BspTI	CTTAAG	1 cut(s)	799
BsrDI	GCAATG	1 cut(s)	984
BsrFI	RCCGGY	2 cut(s)	215, 824
BsrI	ACTGG	4 cut(s)	411, 507, 569, 1049
BssAI	RCCGGY	2 cut(s)	215, 824
BssECI	CCNNGG	1 cut(s)	29
BssMI	GATC	2 cut(s)	1045, 1170
BssNI	GRCGYC	3 cut(s)	129, 170, 219
BssSI	CACGAG	3 cut(s)	601, 846, 1140
BssT1I	CCWWGG	1 cut(s)	29
Bst2BI	CACGAG	3 cut(s)	601, 846, 1140
Bst2UI	CCWGG	1 cut(s)	732
Bst4CI	ACNGT	5 cut(s)	80, 364, 522, 1218, 1252
BstACI	GRCGYC	3 cut(s)	129, 170, 219
BstAFI	CTTAAG	1 cut(s)	799
BstAPI	GCANNNNNTGC	1 cut(s)	842
BstBAI	YACGTR	1 cut(s)	344
BstBI	TTCGAA	1 cut(s)	559
BstC8I	GCNNGC	9 cut(s)	201, 217, 279, 465, 628, 640, 692, 696, 1156
BstDEI	CTNAG	2 cut(s)	282, 320
BstENI	CCTNNNNNAGG	1 cut(s)	1164
BstF5I	GGATG	3 cut(s)	307, 415, 1018
BstFNI	CGCG	1 cut(s)	224
BstH2I	RGCGCY	1 cut(s)	222
BstHHI	GCGC	2 cut(s)	22, 221
BstKTI	GATC	2 cut(s)	1048, 1173
BstMAI	GTCTC	2 cut(s)	120, 766
BstMBI	GATC	2 cut(s)	1045, 1170
BstMCI	CGRYCG	2 cut(s)	64, 213
BstNI	CCWGG	1 cut(s)	732
BstNSI	RCATGY	2 cut(s)	694, 1005
BstSCI	CCNGG	1 cut(s)	730
BstSFI	CTRYAG	2 cut(s)	993, 1248
BstSLI	GKGCMC	1 cut(s)	341
BstUI	CGCG	1 cut(s)	224
BstV1I	GCAGC	4 cut(s)	64, 299, 979, 1007
BstV2I	GAAGAC	2 cut(s)	907, 1036
BstZI	CGGCCG	1 cut(s)	210
BsuRI	GGCC	3 cut(s)	212, 263, 1158
BtsCI	GGATG	3 cut(s)	307, 415, 1018
BtsI	GCAGTG	1 cut(s)	579
BtsIMutI	CAGTG	4 cut(s)	404, 500, 527, 579
Cac8I	GCNNGC	9 cut(s)	201, 217, 279, 465, 628, 640, 692, 696, 1156
CfoI	GCGC	2 cut(s)	22, 221
Cfr10I	RCCGGY	2 cut(s)	215, 824
Cfr13I	GGNCC	3 cut(s)	822, 1136, 1157
CseI	GACGC	1 cut(s)	137
Csp6I	GTAC	2 cut(s)	360, 394
CviAII	CATG	7 cut(s)	97, 356, 543, 691, 767, 829, 1002
CviQI	GTAC	2 cut(s)	360, 394
DdeI	CTNAG	2 cut(s)	282, 320
DinI	GGCGCC	1 cut(s)	220
DpnI	GATC	2 cut(s)	1047, 1172
DpnII	GATC	2 cut(s)	1045, 1170
DraI	TTTAAA	1 cut(s)	703
EaeI	YGGCCR	2 cut(s)	210, 261
EagI	CGGCCG	1 cut(s)	210
EclXI	CGGCCG	1 cut(s)	210
Eco130I	CCWWGG	1 cut(s)	29
Eco47I	GGWCC	2 cut(s)	822, 1136
Eco52I	CGGCCG	1 cut(s)	210
Eco72I	CACGTG	1 cut(s)	344
Eco88I	CYCGRG	1 cut(s)	884
EcoNI	CCTNNNNNAGG	1 cut(s)	1164
EcoO109I	RGGNCCY	1 cut(s)	1157
EcoRI	GAATTC	2 cut(s)	351, 575
EcoRII	CCWGG	1 cut(s)	730
EcoT14I	CCWWGG	1 cut(s)	29
EgeI	GGCGCC	1 cut(s)	220
EheI	GGCGCC	1 cut(s)	220
ErhI	CCWWGG	1 cut(s)	29
Esp3I	CGTCTC	1 cut(s)	120
FaeI	CATG	7 cut(s)	100, 359, 546, 694, 770, 832, 1005
FaqI	GGGAC	3 cut(s)	161, 522, 1131
FatI	CATG	7 cut(s)	96, 355, 542, 690, 766, 828, 1001
FauI	CCCGC	1 cut(s)	138
FblI	GTMKAC	1 cut(s)	878
Fnu4HI	GCNGC	7 cut(s)	53, 213, 222, 288, 990, 993, 996
FokI	GGATG	3 cut(s)	294, 422, 1025
Fsp4HI	GCNGC	7 cut(s)	53, 213, 222, 288, 990, 993, 996
FspBI	CTAG	2 cut(s)	185, 681
GlaI	GCGC	2 cut(s)	21, 220
GluI	GCNGC	7 cut(s)	53, 213, 222, 288, 990, 993, 996
GsaI	CCCAGC	1 cut(s)	600
HaeII	RGCGCY	1 cut(s)	222
HaeIII	GGCC	3 cut(s)	212, 263, 1158
HapII	CCGG	4 cut(s)	101, 132, 216, 825
HgaI	GACGC	1 cut(s)	137
HhaI	GCGC	2 cut(s)	22, 221
Hin1I	GRCGYC	3 cut(s)	129, 170, 219
Hin1II	CATG	7 cut(s)	100, 359, 546, 694, 770, 832, 1005
Hin6I	GCGC	2 cut(s)	20, 219
HinP1I	GCGC	2 cut(s)	20, 219
HincII	GTYRAC	1 cut(s)	879
HindII	GTYRAC	1 cut(s)	879
HinfI	GANTC	5 cut(s)	25, 135, 531, 745, 880
HpaII	CCGG	4 cut(s)	101, 132, 216, 825
HphI	GGTGA	3 cut(s)	46, 321, 932
Hpy166II	GTNNAC	3 cut(s)	329, 339, 879
Hpy188I	TCNGA	2 cut(s)	175, 896
Hpy188III	TCNNGA	5 cut(s)	772, 820, 848, 884, 1195
Hpy8I	GTNNAC	3 cut(s)	329, 339, 879
Hpy99I	CGWCG	3 cut(s)	80, 172, 175
HpyAV	CCTTC	5 cut(s)	342, 447, 1170, 1192, 1249
HpyCH4III	ACNGT	5 cut(s)	80, 364, 522, 1218, 1252
HpyCH4IV	ACGT	4 cut(s)	170, 343, 756, 1269
HpyF3I	CTNAG	2 cut(s)	282, 320
HpySE526I	ACGT	4 cut(s)	170, 343, 756, 1269
Hsp92I	GRCGYC	3 cut(s)	129, 170, 219
Hsp92II	CATG	7 cut(s)	100, 359, 546, 694, 770, 832, 1005
HspAI	GCGC	2 cut(s)	20, 219
KasI	GGCGCC	1 cut(s)	218
KroI	GCCGGC	1 cut(s)	215
KroNI	GCCGGC	1 cut(s)	217
Kzo9I	GATC	2 cut(s)	1045, 1170
LmnI	GCTCC	4 cut(s)	103, 196, 598, 833
Lsp1109I	GCAGC	4 cut(s)	64, 299, 979, 1007
LweI	GCATC	1 cut(s)	316
MaeI	CTAG	2 cut(s)	185, 681
MaeII	ACGT	4 cut(s)	170, 343, 756, 1269
MaeIII	GTNAC	1 cut(s)	44
MalI	GATC	2 cut(s)	1047, 1172
MboI	GATC	2 cut(s)	1045, 1170
MboII	GAAGA	4 cut(s)	584, 909, 912, 1041
MhlI	GDGCHC	2 cut(s)	341, 838
MlsI	TGGCCA	1 cut(s)	263
MluCI	AATT	4 cut(s)	351, 437, 575, 955
MluNI	TGGCCA	1 cut(s)	263
Mly113I	GGCGCC	1 cut(s)	219
MlyI	GAGTC	2 cut(s)	739, 874
MmeI	TCCRAC	2 cut(s)	153, 541
Mox20I	TGGCCA	1 cut(s)	263
MreI	CGCCGGCG	1 cut(s)	215
MroNI	GCCGGC	1 cut(s)	215
MscI	TGGCCA	1 cut(s)	263
MseI	TTAA	5 cut(s)	246, 702, 800, 909, 1235
MslI	CAYNNNNRTG	1 cut(s)	334
Msp20I	TGGCCA	1 cut(s)	263
MspA1I	CMGCKG	1 cut(s)	290
MspCI	CTTAAG	1 cut(s)	799
MspI	CCGG	4 cut(s)	101, 132, 216, 825
MspR9I	CCNGG	1 cut(s)	732
MvaI	CCWGG	1 cut(s)	732
MvnI	CGCG	1 cut(s)	224
NaeI	GCCGGC	1 cut(s)	217
NarI	GGCGCC	1 cut(s)	219
NdeII	GATC	2 cut(s)	1045, 1170
NgoMIV	GCCGGC	1 cut(s)	215
NlaIII	CATG	7 cut(s)	100, 359, 546, 694, 770, 832, 1005
NlaIV	GGNNCC	2 cut(s)	220, 982
NmeAIII	GCCGAG	1 cut(s)	188
NmuCI	GTSAC	1 cut(s)	44
NspI	RCATGY	2 cut(s)	694, 1005
NspV	TTCGAA	1 cut(s)	559
OliI	CACNNNNGTG	1 cut(s)	334
PaeI	GCATGC	1 cut(s)	694
PaeR7I	CTCGAG	1 cut(s)	884
PciI	ACATGT	1 cut(s)	1001
PcsI	WCGNNNNNNNCGW	1 cut(s)	1147
PdiI	GCCGGC	1 cut(s)	217
PfeI	GAWTC	3 cut(s)	25, 135, 531
PflFI	GACNNNGTC	1 cut(s)	758
PkrI	GCNGC	7 cut(s)	54, 214, 223, 289, 991, 994, 997
PleI	GAGTC	2 cut(s)	739, 874
PluTI	GGCGCC	1 cut(s)	222
PmaCI	CACGTG	1 cut(s)	344
PmlI	CACGTG	1 cut(s)	344
PpsI	GAGTC	2 cut(s)	739, 874
Ppu21I	YACGTR	1 cut(s)	344
PscI	ACATGT	1 cut(s)	1001
Psp6I	CCWGG	1 cut(s)	730
PspCI	CACGTG	1 cut(s)	344
PspFI	CCCAGC	1 cut(s)	596
PspGI	CCWGG	1 cut(s)	730
PspN4I	GGNNCC	2 cut(s)	220, 982
PspPI	GGNCC	3 cut(s)	822, 1136, 1157
PstI	CTGCAG	1 cut(s)	997
PsyI	GACNNNGTC	1 cut(s)	758
PvuII	CAGCTG	1 cut(s)	290
RsaI	GTAC	2 cut(s)	361, 395
RsaNI	GTAC	2 cut(s)	360, 394
RseI	CAYNNNNRTG	1 cut(s)	334
SalI	GTCGAC	1 cut(s)	877
SaqAI	TTAA	5 cut(s)	246, 702, 800, 909, 1235
SatI	GCNGC	7 cut(s)	53, 213, 222, 288, 990, 993, 996
Sau3AI	GATC	2 cut(s)	1045, 1170
Sau96I	GGNCC	3 cut(s)	822, 1136, 1157
SchI	GAGTC	2 cut(s)	739, 874
ScrFI	CCNGG	1 cut(s)	732
SduI	GDGCHC	2 cut(s)	341, 838
SfaNI	GCATC	1 cut(s)	316
SfcI	CTRYAG	2 cut(s)	993, 1248
SfoI	GGCGCC	1 cut(s)	220
Sfr274I	CTCGAG	1 cut(s)	884
SfuI	TTCGAA	1 cut(s)	559
SgrAI	CRCCGGYG	1 cut(s)	215
SinI	GGWCC	2 cut(s)	822, 1136
SlaI	CTCGAG	1 cut(s)	884
SmiMI	CAYNNNNRTG	1 cut(s)	334
SmlI	CTYRAG	2 cut(s)	799, 884
SmoI	CTYRAG	2 cut(s)	799, 884
SphI	GCATGC	1 cut(s)	694
Sse9I	AATT	4 cut(s)	351, 437, 575, 955
SsiI	CCGC	6 cut(s)	145, 194, 213, 222, 311, 989
SspDI	GGCGCC	1 cut(s)	218
SspMI	CTAG	2 cut(s)	185, 681
StyD4I	CCNGG	1 cut(s)	730
StyI	CCWWGG	1 cut(s)	29
TaaI	ACNGT	5 cut(s)	80, 364, 522, 1218, 1252
TaiI	ACGT	4 cut(s)	173, 346, 759, 1272
TaqI	TCGA	7 cut(s)	60, 75, 430, 459, 559, 878, 885
TaqII	GACCGA	2 cut(s)	78, 1124
TasI	AATT	4 cut(s)	351, 437, 575, 955
TatI	WGTACW	1 cut(s)	393
TauI	GCSGC	3 cut(s)	215, 224, 992
TfiI	GAWTC	3 cut(s)	25, 135, 531
Tru1I	TTAA	5 cut(s)	246, 702, 800, 909, 1235
Tru9I	TTAA	5 cut(s)	246, 702, 800, 909, 1235
TscAI	CASTG	4 cut(s)	411, 507, 527, 586
TseFI	GTSAC	1 cut(s)	44
TseI	GCWGC	4 cut(s)	52, 287, 992, 995
Tsp45I	GTSAC	1 cut(s)	44
TspDTI	ATGAA	4 cut(s)	344, 939, 1076, 1203
TspRI	CASTG	4 cut(s)	411, 507, 527, 586
Tth111I	GACNNNGTC	1 cut(s)	758
Vha464I	CTTAAG	1 cut(s)	799
VneI	GTGCAC	1 cut(s)	337
VpaK11BI	GGWCC	2 cut(s)	822, 1136
XagI	CCTNNNNNAGG	1 cut(s)	1164
XapI	RAATTY	4 cut(s)	351, 437, 575, 955
XceI	RCATGY	2 cut(s)	694, 1005
XhoI	CTCGAG	1 cut(s)	884
XmiI	GTMKAC	1 cut(s)	878
XspI	CTAG	2 cut(s)	185, 681
ZraI	GACGTC	1 cut(s)	171

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.