Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb7

Orthogroup ID

OG0007920

Physical Location & Seq

Genomic Coordinates Forward (+)

23776409 .. 23784588

Gene Structure 8180 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_7g33400.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3654 bp

ATGGCGAACATCGCCATGACTGGTATACTGGAGAAGATGACGGGGAAGGATAAGGATTATAGATACATGGCGACATCGGATTTGTTGAACGAATTAAATAAAGACAATTTTAAAGCTGATTCTGATCTAGAGATAAAGTTGTCGAATATTATTATTCAGCAACTCGATGATGTTGCCGGCGATGTATCTGGATTGGCTGTCAAATGTCTTGCTCCATTAGTTAAGAAGGTCAGCGAGCCACGAGTTGTGGAGATGACAAATAAACTTTGTGAAAAGTTGCTAAAGGAGAAGGATCAACATCGTGACATTGCCAGCATAGCTATGAAGGCTATTGTTGCAGAAGTCTCTACTCAATCACTTGCGCAGTCTATTCTTGTTGCTATTTTACCTCAGTTGATTAGAGGAATTACTGCCCCGGGAATGAGCACAGAGATAAAATGTGAATGTCTTGATATCTTATGTGAAGTCCTTCATAAGTTTGGCAATCTTATGGCTACCGACCATGAGCTGCTATTAGGTGCTCTCTTGTCTCAGTTGAGTTCCAATCAAGCCAGCGTGAGGAAGAGAACTGTGTCATGCATTGCATCACTTGCTTCAAGCTTGTCAGACGATTTGTTGGCAAAGGCTACTGGTGAAGTTGTTCAGAACTTGAGAAATAAAGGCACAAAGTCTGAAATGACTCGTACAAATATTCAGATGATTGGTGCTTTAAGTCGTGCTGTTGGCTATCGTTTTGGACCCCATCTTGCTGACACTGTTCCAGTGCTTATCAATTACTGCACAAGTGCATCTGAGAATGATGAAGAGCTTCGTGAGTACAGCTTGCAGGCACTAGAGAGTTTTCTGCTTAGGTGTCCCAGGGATATTTCTTCCTATTGTGATGAAATACTTCATCTCAACTTGGAGTATCTGAGTTACGACCCAAACTTCACAGATAACATGGAAGAGGATACTGATGATGAAACTCTTGAGGAGGAGGAAGATGATGAGAGTGCGAACGAATATACAGATGATGAAGATGTCAGTTGGAAAGTCCGAAGAGCAGCAGCTAAATGCTTAGCAGCATTAATTGTATCTCGTCCTGAGATGCTTGCTAAGCTGTATGAGGAGGCTTGTCCAAAATTAATCGAGAGGTTTAAAGAGAGGGAAGAGAATGTCAAGATGGATGTTTTCAATACTTTTACAGAGCTCTTGCAGCAAACTGGAAATGTCACAAAGGGCCAGATTGACATTAATGAACAGAGTCCAAGATGGTTATTGAAGCAAGAAGTGCCAAAGATTGTCAGATCTATTAACAGGCAACTACGTGAGAAATCTATCAAGACGAAGGTTGGTGCATTTTCTGTTTTGAAAGAACTTGTGGTGGTTTTGCCAGATTGCCTGGCAGATCAAATTGGCTCGCTCATTCCAGGAATTGAAAAAGCGTTAAGTGACAAGTCCTCTACCTCAAATTTGAAGATTGAAGCTCTTATATTTACAAGATTAGTGCTGGCTTCACATTCTCCTTCTGTTTTTCATCCTTACATCAAGGCTCTCTCTAGTCCTGTTTTATCTGCCGTGGCAGAGCGTTACTACAAAGTCACAGCTGAAGCACTTAGGGTCTGTGGTGAACTTGTGCGTGTTGTTCGCCCAAATATTGAGGGGACTGGTTTTGATTTCAAACCGTATGTTCAACCAATATATAAGGCAATTATGTCCCGCTTGACAAACCAAGATCAAGATCAGGAGGTGAAAGAATGTGCTATATCTTGCATGGGACTACTTGTGTCGACATTTGGTGATAACCTCAATGCTGAATTATCTGTGTGCCTTCCTGTACTGGTTGATCGGATGGGAAATGAGATCACTCGACTTACAGCAGTGAAGGCATTTGCTGTCATTGCTTCTTCCCCATTGCGGATAGACCTGTCTTGTGTTTTGGATCAAGTAATAGCAGAGTTGACTGCATTCTTAAGAAAGGCTAATCGGCCTCTGAGGCAGGCAACACTGGGAACCCTGAATTCCCTAATTGTTGCCTATGGTGATAAAATTGGTCCATCAGCTTATGAAGTTATTATTGTAGAACTTGCAACACTGATAAGTGATTCAGACTTGCGTATGACGGCTCTTGCCCTAGAACTTTGCTGCACCTTGATGGCCGACAGGTCAAGCCTAGTTGTTGGTTTGGCTGTTAGAAATAAAGTTCTTCCACAAGCCCTAACATTAATTAAAAGCTCACTGCTGCAGGGGTCAGCTCTATTGGCGTTACAAAACTTCTTTGCTTCCTTGGTGTATTCTGCAAACACAAGTTTTGATGCCTTACTGGACTCTCTTCTTTCAAGCGCTAAACCGTCACCTCAGTCTGGTGGGGTTGCAAAACAAGCTCTATATTCAATAGCTCAATGTGTGGCTGTCCTTTGTCTTGCTGCTGGTGATCAGAAATGTTCATCTACAGTGAAGATGCTTACCGAAATCCTCAAACATGACAGCAGTACAAACTCCGCTAAGCAACATCTTGCATTGCTATGTCTAGGGGAGATTGGGAGAAGGAAAGATCTAAGCTCTCATGCGCATATTGAGAATATTGTCATCGAGTCGTTTCAGTCTCCTTTCGAGGAGATTAAGTCTGCAGCCTCCTATGCTCTTGGCAATATTGCAGTTGGTAACCTATTCAAATATTTGCCTTTTATCTTGGACCAGATTGACAATCAGCAGAAAAAACAGTATCTCTTGCTTCATTCTTTAAAGGAGGTCATAGTAAGGCAATCTGTAGACAAAGCTGAGTTTCAGGACACTAGTGTTGAAAAAATACTCAATTTACTTTTTAATCACTGTGAAAGTGAGGAAGAGGGTGTTCGCAATGTGGTGGCTGAATGTCTGGGTAAAATTGCACTTATTGAACCTGCAAAACTGGTTCCCGCACTCAAGGTGCGCACAACCAGCCCAGCTGCTTTCACAAGAGCTACGGTTGTCATTGCAGTTAAGTATTCAGTAGTAGAGAGGCCAGAGAAGATAGACGAGATCTTATATCCTGAAATCTCATCTTTCTTGATGCTTATTAAGGATCATGACCGGCATGTCAGGCGTGCAGCTGTGTTGGCTTTAAGCACATTCGCTCATAATAAGCCAAACCTCATCAAGGGGCTTCTGCCGGAGTTGTTGCCACTTCTTTATGATCAGACTGTTATCAAGAAAGAATTGATCAGGACTGTTGATCTCGGTCCTTTTAAGCACATTGTGGATGATGGGCTTGAGTTAAGGAAGGCTGCATTTGAATGTGTGGATACTTTACTAGACAGTTGTCTTGACCAAGTGAATCCTTCATCATTTATTGTTCCTTACCTCAAATCTGGTCTTGATGATCATTATGATGTTAAGATGCCTTGCCATCTTATCCTCTCAAAGCTTGCAGACAAGTGTCCATCAGCTGTACTAGCAGTATTGGATTCATTGGTGGATCATCTCCAAAAAACCATCAACTTTAAGCCAAAGCAAGATGCTGTAAAGCAAGAAGTAGATCGCAATGAAGACATGATCCGCAGCGCTCTAAGAACAATTGCCTCCTTGCATCGTATAAGCGGGGGAGATTGCAGCATTAAGTTCAAGAACCTTACAAATGAAATAGCAAAATCTCCTGCGCTATGGGACAAGTATTGCTCCATCAGAAATGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003002 GO:0003006 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005886 GO:0006464 GO:0006807 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009733 GO:0009791 GO:0009987 GO:0010033 GO:0010051 GO:0010228 GO:0010265 GO:0016020 GO:0016043 GO:0016567 GO:0019538 GO:0022414 GO:0022607 GO:0030312 GO:0032446 GO:0032501 GO:0032502 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0061458 GO:0065003 GO:0070647 GO:0071704 GO:0071840 GO:0071944 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TIP120

Protein Analysis

1218

Amino Acids

134.58

Weight (kDa)

5.66

Isoelectric Point (pI)

49.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_CAND1	PF25782	460 - 585	7.4e-48	CAND1-like, TPR repeats

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0007920)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G02560 AT2G02560
fragaria_vesca	FvH4_7g33400 FvH4_7g33400
malus_domestica	MD01G1232300.v1.1 MD07G1304100.v1.1
prunus_persica	Prupe.2G322700_v2.0.a1 Prupe.2G322700_v2.0.a1 Prupe.2G322700_v2.0.a1
pyrus_communis	pycom01g24070 pycom07g27710
rosa_chinensis	RchiOBHm_Chr1g0383371
rosa_laevigata	RLG00000026107
rosa_multiflora	Rmu_co8130632.1_g000001 Rmu_sc0007173.1_g000011 Rmu_sc0019557.1_g000001 Rmu_sc0020036.1_g000001
rosa_roxburghii	Rroxscaffold_4G00277350
rosa_rugosa	Rorug01G0441000
rosa_samantha	Rh1AG466900 Rh1BG424200 Rh1CG437300 Rh1DG456900
rosa_wichuraiana	Rw1G040570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	3056
Acc16I	TGCGCA	3 cut(s)	363, 2550, 2912
Acc36I	ACCTGC	1 cut(s)	2890
AccI	GTMKAC	3 cut(s)	25, 1769, 2751
AciI	CCGC	6 cut(s)	1699, 1897, 2481, 2898, 3517, 3558
AclWI	GGATC	5 cut(s)	300, 1929, 3051, 3444, 3508
AcoI	YGGCCR	1 cut(s)	2136
AcsI	RAATTY	2 cut(s)	1450, 1999
AcuI	CTGAAG	1 cut(s)	1608
AdeI	CACNNNGTG	1 cut(s)	3217
AfaI	GTAC	5 cut(s)	685, 818, 1818, 2473, 3411
AfeI	AGCGCT	2 cut(s)	2323, 3523
AfiI	CCNNNNNNNGG	4 cut(s)	558, 1896, 2342, 3118
AflII	CTTAAG	1 cut(s)	1951
AhlI	ACTAGT	1 cut(s)	2774
AjnI	CCWGG	3 cut(s)	857, 1380, 1408
Alw21I	GWGCWC	3 cut(s)	428, 523, 1191
Alw26I	GTCTC	3 cut(s)	349, 534, 2589
AlwI	GGATC	5 cut(s)	300, 1929, 3051, 3444, 3508
Ama87I	CYCGRG	1 cut(s)	415
Aor51HI	AGCGCT	2 cut(s)	2323, 3523
AoxI	GGCC	4 cut(s)	1219, 1967, 2136, 2981
ApoI	RAATTY	2 cut(s)	1450, 1999
ArsI	GACNNNNNNTTYG	2 cut(s)	64, 96
AseI	ATTAAT	4 cut(s)	1067, 1124, 1233, 2204
Asp700I	GAANNNNTTC	4 cut(s)	468, 639, 807, 888
AspLEI	GCGC	6 cut(s)	364, 2324, 2551, 2913, 3524, 3619
AspS9I	GGNCC	5 cut(s)	737, 1219, 2033, 2674, 3200
AsuC2I	CCSGG	2 cut(s)	416, 417
AsuHPI	GGTGA	7 cut(s)	644, 1619, 1741, 1790, 2033, 2325, 2423
AvaI	CYCGRG	1 cut(s)	415
AvaII	GGWCC	4 cut(s)	737, 2033, 2674, 3200
BanII	GRGCYC	1 cut(s)	1191
BauI	CACGAG	1 cut(s)	240
BbsI	GAAGAC	1 cut(s)	3513
Bbv12I	GWGCWC	3 cut(s)	428, 523, 1191
BceAI	ACGGC	2 cut(s)	1541, 2118
BcgI	CGANNNNNNTGC	2 cut(s)	155, 189
BciT130I	CCWGG	3 cut(s)	859, 1382, 1410
BciVI	GTATCC	2 cut(s)	943, 3256
BclI	TGATCA	4 cut(s)	2413, 3154, 3180, 3340
BcnI	CCSGG	2 cut(s)	416, 417
BcoDI	GTCTC	3 cut(s)	349, 534, 2589
BcuI	ACTAGT	1 cut(s)	2774
BfaI	CTAG	9 cut(s)	128, 833, 1539, 2114, 2153, 2510, 2775, 3272, 3413
BfmI	CTRYAG	4 cut(s)	2222, 2430, 2607, 2748
BfoI	RGCGCY	2 cut(s)	2325, 3525
BfrI	CTTAAG	1 cut(s)	1951
BfuAI	ACCTGC	1 cut(s)	2890
BfuI	GTATCC	2 cut(s)	943, 3256
BglI	GCCNNNNNGGC	1 cut(s)	1975
BglII	AGATCT	3 cut(s)	1286, 2533, 3000
BlpI	GCTNAGC	3 cut(s)	1057, 1095, 2484
Bme1390I	CCNGG	5 cut(s)	416, 417, 859, 1382, 1410
Bme18I	GGWCC	4 cut(s)	737, 2033, 2674, 3200
BmeT110I	CYCGRG	1 cut(s)	415
BmgT120I	GGNCC	5 cut(s)	737, 1219, 2033, 2674, 3200
BmiI	GGNNCC	3 cut(s)	739, 1993, 2895
BmrFI	CCNGG	5 cut(s)	416, 417, 859, 1382, 1410
BmrI	ACTGGG	1 cut(s)	1997
BmsI	GCATC	9 cut(s)	593, 797, 1077, 2284, 2430, 3021, 3348, 3466, 3556
BmuI	ACTGGG	1 cut(s)	1997
BoxI	GACNNNNGTC	2 cut(s)	3279, 3396
BpiI	GAAGAC	1 cut(s)	3513
BpmI	CTGGAG	1 cut(s)	50
Bpu10I	CCTNAGC	1 cut(s)	848
Bpu1102I	GCTNAGC	3 cut(s)	1057, 1095, 2484
BpuEI	CTTGAG	4 cut(s)	670, 989, 2888, 3251
BpuMI	CCSGG	2 cut(s)	416, 417
BsaAI	YACGTR	1 cut(s)	1307
BsaBI	GATNNNNATC	3 cut(s)	123, 297, 1719
BsaJI	CCNNGG	6 cut(s)	414, 415, 857, 858, 1557, 2265
BsaXI	ACNNNNNCTCC	2 cut(s)	2588, 2618
Bsc4I	CCNNNNNNNGG	4 cut(s)	558, 1896, 2342, 3118
Bse118I	RCCGGY	2 cut(s)	176, 3051
Bse3DI	GCAATG	8 cut(s)	306, 579, 1878, 1892, 2498, 2845, 2952, 3508
Bse8I	GATNNNNATC	3 cut(s)	123, 297, 1719
BseBI	CCWGG	3 cut(s)	859, 1382, 1410
BseDI	CCNNGG	6 cut(s)	414, 415, 857, 858, 1557, 2265
BseGI	GGATG	4 cut(s)	1171, 1516, 1836, 3226
BseJI	GATNNNNATC	3 cut(s)	123, 297, 1719
BseLI	CCNNNNNNNGG	4 cut(s)	558, 1896, 2342, 3118
BseMI	GCAATG	8 cut(s)	306, 579, 1878, 1892, 2498, 2845, 2952, 3508
BseMII	CTCAG	8 cut(s)	404, 545, 783, 902, 1074, 1964, 2351, 2751
BseRI	GAGGAG	4 cut(s)	986, 989, 1121, 2609
BseYI	CCCAGC	1 cut(s)	2923
BsgI	GTGCAG	3 cut(s)	763, 2110, 3087
BshFI	GGCC	4 cut(s)	1221, 1969, 2138, 2983
BsiHKAI	GWGCWC	3 cut(s)	428, 523, 1191
BsiHKCI	CYCGRG	1 cut(s)	415
BsiSI	CCGG	4 cut(s)	177, 416, 3052, 3131
BslFI	GGGAC	5 cut(s)	840, 1657, 1681, 1770, 3638
BslI	CCNNNNNNNGG	4 cut(s)	558, 1896, 2342, 3118
BsmAI	GTCTC	3 cut(s)	349, 534, 2589
BsmFI	GGGAC	5 cut(s)	840, 1657, 1681, 1770, 3638
BsmI	GAATGC	1 cut(s)	1946
BsnI	GGCC	4 cut(s)	1221, 1969, 2138, 2983
BsoBI	CYCGRG	1 cut(s)	415
Bsp1286I	GDGCHC	3 cut(s)	428, 523, 1191
Bsp1720I	GCTNAGC	3 cut(s)	1057, 1095, 2484
BspACI	CCGC	6 cut(s)	1699, 1897, 2481, 2898, 3517, 3558
BspANI	GGCC	4 cut(s)	1221, 1969, 2138, 2983
BspCNI	CTCAG	8 cut(s)	403, 544, 784, 903, 1075, 1965, 2350, 2752
BspHI	TCATGA	1 cut(s)	3046
BspLI	GGNNCC	3 cut(s)	739, 1993, 2895
BspMAI	CTGCAG	2 cut(s)	2226, 2611
BspMI	ACCTGC	1 cut(s)	2890
BspPI	GGATC	5 cut(s)	300, 1929, 3051, 3444, 3508
BspQI	GCTCTTC	2 cut(s)	798, 1033
BspTI	CTTAAG	1 cut(s)	1951
BsrDI	GCAATG	8 cut(s)	306, 579, 1878, 1892, 2498, 2845, 2952, 3508
BsrFI	RCCGGY	2 cut(s)	176, 3051
BssAI	RCCGGY	2 cut(s)	176, 3051
BssECI	CCNNGG	6 cut(s)	414, 415, 857, 858, 1557, 2265
BssNAI	GTATAC	1 cut(s)	26
BssSI	CACGAG	1 cut(s)	240
BssT1I	CCWWGG	1 cut(s)	2265
Bst1107I	GTATAC	1 cut(s)	26
Bst2BI	CACGAG	1 cut(s)	240
Bst2UI	CCWGG	3 cut(s)	859, 1382, 1410
Bst6I	CTCTTC	7 cut(s)	557, 798, 939, 1033, 1143, 2316, 2820
BstAFI	CTTAAG	1 cut(s)	1951
BstAPI	GCANNNNNTGC	2 cut(s)	590, 1270
BstBAI	YACGTR	1 cut(s)	1307
BstDSI	CCRYGG	1 cut(s)	1557
BstEII	GGTNACC	1 cut(s)	2642
BstENI	CCTNNNNNAGG	1 cut(s)	3116
BstF5I	GGATG	4 cut(s)	1171, 1516, 1836, 3226
BstH2I	RGCGCY	2 cut(s)	2325, 3525
BstHHI	GCGC	6 cut(s)	364, 2324, 2551, 2913, 3524, 3619
BstMAI	GTCTC	3 cut(s)	349, 534, 2589
BstNI	CCWGG	3 cut(s)	859, 1382, 1410
BstNSI	RCATGY	1 cut(s)	3059
BstPAI	GACNNNNGTC	2 cut(s)	3279, 3396
BstPI	GGTNACC	1 cut(s)	2642
BstSCI	CCNGG	5 cut(s)	414, 415, 857, 1380, 1408
BstSFI	CTRYAG	4 cut(s)	2222, 2430, 2607, 2748
BstV2I	GAAGAC	1 cut(s)	3513
BstX2I	RGATCY	3 cut(s)	1286, 2533, 3000
BstYI	RGATCY	3 cut(s)	1286, 2533, 3000
BstZ17I	GTATAC	1 cut(s)	26
BsuI	GTATCC	2 cut(s)	943, 3256
BsuRI	GGCC	4 cut(s)	1221, 1969, 2138, 2983
BtgI	CCRYGG	1 cut(s)	1557
BtgZI	GCGATG	1 cut(s)	195
BtsCI	GGATG	4 cut(s)	1171, 1516, 1836, 3226
BtsI	GCAGTG	2 cut(s)	1866, 2216
BtsIMutI	CAGTG	8 cut(s)	753, 768, 1866, 1985, 2072, 2216, 2439, 2809
BveI	ACCTGC	1 cut(s)	2890
CciI	TCATGA	1 cut(s)	3046
CfoI	GCGC	6 cut(s)	364, 2324, 2551, 2913, 3524, 3619
Cfr10I	RCCGGY	2 cut(s)	176, 3051
Cfr13I	GGNCC	5 cut(s)	737, 1219, 2033, 2674, 3200
Cfr9I	CCCGGG	1 cut(s)	415
Csp6I	GTAC	5 cut(s)	684, 817, 1817, 2472, 3410
CviQI	GTAC	5 cut(s)	684, 817, 1817, 2472, 3410
DraI	TTTAAA	3 cut(s)	112, 1138, 2724
DraIII	CACNNNGTG	1 cut(s)	3217
DrdI	GACNNNNNNGTC	1 cut(s)	3056
DseDI	GACNNNNNNGTC	1 cut(s)	3056
EaeI	YGGCCR	1 cut(s)	2136
Eam1104I	CTCTTC	7 cut(s)	557, 798, 939, 1033, 1143, 2316, 2820
EarI	CTCTTC	7 cut(s)	557, 798, 939, 1033, 1143, 2316, 2820
Ecl136II	GAGCTC	1 cut(s)	1189
Eco130I	CCWWGG	1 cut(s)	2265
Eco24I	GRGCYC	1 cut(s)	1191
Eco32I	GATATC	1 cut(s)	454
Eco47I	GGWCC	4 cut(s)	737, 2033, 2674, 3200
Eco47III	AGCGCT	2 cut(s)	2323, 3523
Eco53kI	GAGCTC	1 cut(s)	1189
Eco57I	CTGAAG	1 cut(s)	1608
Eco88I	CYCGRG	1 cut(s)	415
Eco91I	GGTNACC	1 cut(s)	2642
EcoICRI	GAGCTC	1 cut(s)	1189
EcoNI	CCTNNNNNAGG	1 cut(s)	3116
EcoO65I	GGTNACC	1 cut(s)	2642
EcoRI	GAATTC	1 cut(s)	1999
EcoRII	CCWGG	3 cut(s)	857, 1380, 1408
EcoRV	GATATC	1 cut(s)	454
EcoT14I	CCWWGG	1 cut(s)	2265
EcoT22I	ATGCAT	1 cut(s)	581
EcoT38I	GRGCYC	1 cut(s)	1191
ErhI	CCWWGG	1 cut(s)	2265
FaqI	GGGAC	5 cut(s)	840, 1657, 1681, 1770, 3638
FauI	CCCGC	3 cut(s)	1706, 2905, 3551
FbaI	TGATCA	4 cut(s)	2413, 3154, 3180, 3340
FblI	GTMKAC	3 cut(s)	25, 1769, 2751
FokI	GGATG	4 cut(s)	1178, 1503, 1843, 3233
FriOI	GRGCYC	1 cut(s)	1191
FspAI	RTGCGCAY	2 cut(s)	2550, 2912
FspBI	CTAG	9 cut(s)	128, 833, 1539, 2114, 2153, 2510, 2775, 3272, 3413
FspI	TGCGCA	3 cut(s)	363, 2550, 2912
GlaI	GCGC	6 cut(s)	363, 2323, 2550, 2912, 3523, 3618
GsaI	CCCAGC	1 cut(s)	2927
GsuI	CTGGAG	1 cut(s)	50
HaeII	RGCGCY	2 cut(s)	2325, 3525
HaeIII	GGCC	4 cut(s)	1221, 1969, 2138, 2983
HapII	CCGG	4 cut(s)	177, 416, 3052, 3131
HhaI	GCGC	6 cut(s)	364, 2324, 2551, 2913, 3524, 3619
Hin6I	GCGC	6 cut(s)	362, 2322, 2549, 2911, 3522, 3617
HinP1I	GCGC	6 cut(s)	362, 2322, 2549, 2911, 3522, 3617
HincII	GTYRAC	2 cut(s)	1770, 1941
HindII	GTYRAC	2 cut(s)	1770, 1941
HindIII	AAGCTT	2 cut(s)	598, 3383
HinfI	GANTC	8 cut(s)	119, 679, 1243, 2084, 2306, 2573, 3295, 3425
HpaII	CCGG	4 cut(s)	177, 416, 3052, 3131
HphI	GGTGA	7 cut(s)	644, 1619, 1741, 1790, 2033, 2325, 2423
Hpy166II	GTNNAC	5 cut(s)	26, 1610, 1770, 1941, 2752
Hpy8I	GTNNAC	5 cut(s)	26, 1610, 1770, 1941, 2752
HpyCH4IV	ACGT	1 cut(s)	1306
HpySE526I	ACGT	1 cut(s)	1306
HspAI	GCGC	6 cut(s)	362, 2322, 2549, 2911, 3522, 3617
KroI	GCCGGC	1 cut(s)	176
KroNI	GCCGGC	1 cut(s)	178
Ksp22I	TGATCA	4 cut(s)	2413, 3154, 3180, 3340
LguI	GCTCTTC	2 cut(s)	798, 1033
LmnI	GCTCC	2 cut(s)	217, 3641
LweI	GCATC	9 cut(s)	593, 797, 1077, 2284, 2430, 3021, 3348, 3466, 3556
MaeI	CTAG	9 cut(s)	128, 833, 1539, 2114, 2153, 2510, 2775, 3272, 3413
MaeII	ACGT	1 cut(s)	1306
MaeIII	GTNAC	9 cut(s)	302, 914, 1210, 1430, 1568, 1579, 2244, 2331, 2642
MfeI	CAATTG	1 cut(s)	3534
MflI	RGATCY	3 cut(s)	1286, 2533, 3000
MhlI	GDGCHC	3 cut(s)	428, 523, 1191
MlyI	GAGTC	4 cut(s)	673, 1252, 2300, 2582
MmeI	TCCRAC	1 cut(s)	1007
Mph1103I	ATGCAT	1 cut(s)	581
MroNI	GCCGGC	1 cut(s)	176
MroXI	GAANNNNTTC	4 cut(s)	468, 639, 807, 888
MslI	CAYNNNNRTG	6 cut(s)	14, 320, 2132, 2503, 3253, 3348
MspA1I	CMGCKG	4 cut(s)	1586, 2927, 3071, 3407
MspCI	CTTAAG	1 cut(s)	1951
MspI	CCGG	4 cut(s)	177, 416, 3052, 3131
MspR9I	CCNGG	5 cut(s)	416, 417, 859, 1382, 1410
MunI	CAATTG	1 cut(s)	3534
Mva1269I	GAATGC	1 cut(s)	1946
MvaI	CCWGG	3 cut(s)	859, 1382, 1410
NaeI	GCCGGC	1 cut(s)	178
NciI	CCSGG	2 cut(s)	416, 417
NgoMIV	GCCGGC	1 cut(s)	176
NlaIV	GGNNCC	3 cut(s)	739, 1993, 2895
NmuCI	GTSAC	5 cut(s)	302, 1210, 1430, 1579, 2331
NsbI	TGCGCA	3 cut(s)	363, 2550, 2912
NsiI	ATGCAT	1 cut(s)	581
NspI	RCATGY	1 cut(s)	3059
PacI	TTAATTAA	1 cut(s)	2208
PagI	TCATGA	1 cut(s)	3046
PasI	CCCWGGG	1 cut(s)	858
PciSI	GCTCTTC	2 cut(s)	798, 1033
PctI	GAATGC	1 cut(s)	1946
PdiI	GCCGGC	1 cut(s)	178
PdmI	GAANNNNTTC	4 cut(s)	468, 639, 807, 888
PfeI	GAWTC	4 cut(s)	119, 2084, 3295, 3425
PfoI	TCCNGGA	1 cut(s)	1408
PleI	GAGTC	4 cut(s)	673, 1251, 2300, 2581
PpsI	GAGTC	4 cut(s)	673, 1251, 2300, 2581
Ppu21I	YACGTR	1 cut(s)	1307
PshAI	GACNNNNGTC	2 cut(s)	3279, 3396
PshBI	ATTAAT	4 cut(s)	1067, 1124, 1233, 2204
Psp124BI	GAGCTC	1 cut(s)	1191
Psp6I	CCWGG	3 cut(s)	857, 1380, 1408
PspEI	GGTNACC	1 cut(s)	2642
PspFI	CCCAGC	1 cut(s)	2923
PspGI	CCWGG	3 cut(s)	857, 1380, 1408
PspN4I	GGNNCC	3 cut(s)	739, 1993, 2895
PspPI	GGNCC	5 cut(s)	737, 1219, 2033, 2674, 3200
PstI	CTGCAG	2 cut(s)	2226, 2611
PsuI	RGATCY	3 cut(s)	1286, 2533, 3000
PvuII	CAGCTG	4 cut(s)	1586, 2927, 3071, 3407
RsaI	GTAC	5 cut(s)	685, 818, 1818, 2473, 3411
RsaNI	GTAC	5 cut(s)	684, 817, 1817, 2472, 3410
RseI	CAYNNNNRTG	6 cut(s)	14, 320, 2132, 2503, 3253, 3348
SacI	GAGCTC	1 cut(s)	1191
SalI	GTCGAC	1 cut(s)	1768
SapI	GCTCTTC	2 cut(s)	798, 1033
Sau96I	GGNCC	5 cut(s)	737, 1219, 2033, 2674, 3200
SchI	GAGTC	4 cut(s)	673, 1252, 2300, 2582
ScrFI	CCNGG	5 cut(s)	416, 417, 859, 1382, 1410
SduI	GDGCHC	3 cut(s)	428, 523, 1191
SfaNI	GCATC	9 cut(s)	593, 797, 1077, 2284, 2430, 3021, 3348, 3466, 3556
SfcI	CTRYAG	4 cut(s)	2222, 2430, 2607, 2748
SinI	GGWCC	4 cut(s)	737, 2033, 2674, 3200
SmaI	CCCGGG	1 cut(s)	417
SmiMI	CAYNNNNRTG	6 cut(s)	14, 320, 2132, 2503, 3253, 3348
SmlI	CTYRAG	5 cut(s)	649, 968, 1951, 2903, 3230
SmoI	CTYRAG	5 cut(s)	649, 968, 1951, 2903, 3230
SpeI	ACTAGT	1 cut(s)	2774
SsiI	CCGC	6 cut(s)	1699, 1897, 2481, 2898, 3517, 3558
SspI	AATATT	6 cut(s)	148, 691, 1636, 2563, 2632, 2657
SspMI	CTAG	9 cut(s)	128, 833, 1539, 2114, 2153, 2510, 2775, 3272, 3413
SstI	GAGCTC	1 cut(s)	1191
StyD4I	CCNGG	5 cut(s)	414, 415, 857, 1380, 1408
StyI	CCWWGG	1 cut(s)	2265
TaiI	ACGT	1 cut(s)	1309
TaqI	TCGA	7 cut(s)	143, 165, 1128, 1769, 1849, 2571, 2592
TaqII	GACCGA	1 cut(s)	3188
TatI	WGTACW	4 cut(s)	816, 1816, 2471, 3409
TfiI	GAWTC	4 cut(s)	119, 2084, 3295, 3425
TscAI	CASTG	8 cut(s)	760, 768, 1866, 1992, 2079, 2223, 2439, 2816
TseFI	GTSAC	5 cut(s)	302, 1210, 1430, 1579, 2331
Tsp45I	GTSAC	5 cut(s)	302, 1210, 1430, 1579, 2331
TspMI	CCCGGG	1 cut(s)	415
TspRI	CASTG	8 cut(s)	760, 768, 1866, 1992, 2079, 2223, 2439, 2816
Vha464I	CTTAAG	1 cut(s)	1951
VpaK11BI	GGWCC	4 cut(s)	737, 2033, 2674, 3200
VspI	ATTAAT	4 cut(s)	1067, 1124, 1233, 2204
XagI	CCTNNNNNAGG	1 cut(s)	3116
XapI	RAATTY	2 cut(s)	1450, 1999
XbaI	TCTAGA	1 cut(s)	127
XceI	RCATGY	1 cut(s)	3059
XmaI	CCCGGG	1 cut(s)	415
XmiI	GTMKAC	3 cut(s)	25, 1769, 2751
XmnI	GAANNNNTTC	4 cut(s)	468, 639, 807, 888
XspI	CTAG	9 cut(s)	128, 833, 1539, 2114, 2153, 2510, 2775, 3272, 3413
Zsp2I	ATGCAT	1 cut(s)	581

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.