Cullin-associated NEDD8-dissociated protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G02560 AT2G02560 |
| fragaria_vesca | FvH4_7g33400 FvH4_7g33400 |
| malus_domestica | MD01G1232300.v1.1 MD07G1304100.v1.1 |
| prunus_persica | Prupe.2G322700_v2.0.a1 Prupe.2G322700_v2.0.a1 Prupe.2G322700_v2.0.a1 |
| pyrus_communis | pycom01g24070 pycom07g27710 |
| rosa_chinensis | RchiOBHm_Chr1g0383371 |
| rosa_laevigata | RLG00000026107 |
| rosa_multiflora | Rmu_co8130632.1_g000001 Rmu_sc0007173.1_g000011 Rmu_sc0019557.1_g000001 Rmu_sc0020036.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00277350 |
| rosa_rugosa | Rorug01G0441000 |
| rosa_samantha | Rh1AG466900 Rh1BG424200 Rh1CG437300 Rh1DG456900 |
| rosa_wichuraiana | Rw1G040570 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 3116 |
| Acc36I | ACCTGC | 1 cut(s) | 2950 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2219 |
| AccI | GTMKAC | 2 cut(s) | 85, 1829 |
| AciI | CCGC | 8 cut(s) | 398, 449, 1121, 1957, 2249, 2971, 3577, 3618 |
| AclWI | GGATC | 6 cut(s) | 360, 1341, 1989, 3111, 3504, 3568 |
| AcoI | YGGCCR | 1 cut(s) | 2196 |
| AcsI | RAATTY | 5 cut(s) | 36, 945, 2059, 2511, 2854 |
| AcuI | CTGAAG | 1 cut(s) | 1668 |
| AdeI | CACNNNGTG | 1 cut(s) | 3277 |
| AfaI | GTAC | 7 cut(s) | 745, 878, 1237, 1878, 2533, 3148, 3471 |
| AfeI | AGCGCT | 2 cut(s) | 2256, 3583 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 618, 1356, 1956, 2173, 2219, 2402, 3178 |
| AflII | CTTAAG | 2 cut(s) | 2963, 3635 |
| AgeI | ACCGGT | 1 cut(s) | 80 |
| AjnI | CCWGG | 5 cut(s) | 917, 1440, 1468, 1587, 2172 |
| Alw21I | GWGCWC | 4 cut(s) | 54, 488, 583, 1251 |
| Alw26I | GTCTC | 2 cut(s) | 594, 2649 |
| AlwI | GGATC | 6 cut(s) | 360, 1341, 1989, 3111, 3504, 3568 |
| Ama87I | CYCGRG | 1 cut(s) | 475 |
| Aor51HI | AGCGCT | 2 cut(s) | 2256, 3583 |
| AoxI | GGCC | 6 cut(s) | 684, 1746, 2027, 2163, 2196, 3041 |
| ApoI | RAATTY | 5 cut(s) | 36, 945, 2059, 2511, 2854 |
| AseI | ATTAAT | 6 cut(s) | 831, 1127, 1184, 1293, 1353, 2264 |
| AsiGI | ACCGGT | 1 cut(s) | 80 |
| Asp700I | GAANNNNTTC | 5 cut(s) | 699, 867, 900, 948, 3595 |
| AspLEI | GCGC | 3 cut(s) | 2257, 2932, 3584 |
| AspS9I | GGNCC | 6 cut(s) | 797, 2052, 2093, 2164, 2734, 3260 |
| AsuC2I | CCSGG | 2 cut(s) | 476, 477 |
| AsuHPI | GGTGA | 3 cut(s) | 1679, 1850, 2483 |
| AvaI | CYCGRG | 1 cut(s) | 475 |
| AvaII | GGWCC | 5 cut(s) | 797, 2052, 2093, 2734, 3260 |
| BanII | GRGCYC | 1 cut(s) | 1251 |
| BauI | CACGAG | 1 cut(s) | 300 |
| BbsI | GAAGAC | 1 cut(s) | 3573 |
| Bbv12I | GWGCWC | 4 cut(s) | 54, 488, 583, 1251 |
| BceAI | ACGGC | 1 cut(s) | 2178 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2887, 2921 |
| BciT130I | CCWGG | 5 cut(s) | 919, 1442, 1470, 1589, 2174 |
| BclI | TGATCA | 3 cut(s) | 3214, 3240, 3400 |
| BcnI | CCSGG | 2 cut(s) | 476, 477 |
| BcoDI | GTCTC | 2 cut(s) | 594, 2649 |
| BfaI | CTAG | 6 cut(s) | 188, 893, 1599, 2363, 3332, 3395 |
| BfmI | CTRYAG | 4 cut(s) | 2282, 2490, 2667, 2808 |
| BfoI | RGCGCY | 2 cut(s) | 2258, 3585 |
| BfrI | CTTAAG | 2 cut(s) | 2963, 3635 |
| BfuAI | ACCTGC | 1 cut(s) | 2950 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 2035 |
| BglII | AGATCT | 2 cut(s) | 2593, 3060 |
| BlpI | GCTNAGC | 2 cut(s) | 1117, 2544 |
| BmcAI | AGTACT | 1 cut(s) | 1237 |
| Bme1390I | CCNGG | 7 cut(s) | 476, 477, 919, 1442, 1470, 1589, 2174 |
| Bme18I | GGWCC | 5 cut(s) | 797, 2052, 2093, 2734, 3260 |
| BmeT110I | CYCGRG | 1 cut(s) | 475 |
| BmgT120I | GGNCC | 6 cut(s) | 797, 2052, 2093, 2164, 2734, 3260 |
| BmiI | GGNNCC | 4 cut(s) | 799, 2053, 2054, 2955 |
| BmrFI | CCNGG | 7 cut(s) | 476, 477, 919, 1442, 1470, 1589, 2174 |
| BmrI | ACTGGG | 3 cut(s) | 815, 2057, 2207 |
| BmuI | ACTGGG | 3 cut(s) | 815, 2057, 2207 |
| BoxI | GACNNNNGTC | 1 cut(s) | 3456 |
| BpiI | GAAGAC | 1 cut(s) | 3573 |
| BpmI | CTGGAG | 1 cut(s) | 110 |
| Bpu10I | CCTNAGC | 1 cut(s) | 908 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 1117, 2544 |
| BpuEI | CTTGAG | 3 cut(s) | 730, 1049, 3311 |
| BpuMI | CCSGG | 2 cut(s) | 476, 477 |
| BsaAI | YACGTR | 1 cut(s) | 1367 |
| BsaBI | GATNNNNATC | 3 cut(s) | 183, 357, 1779 |
| BsaJI | CCNNGG | 6 cut(s) | 474, 475, 917, 918, 2172, 2325 |
| BsaWI | WCCGGW | 1 cut(s) | 80 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 25, 55, 2648, 2678 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 618, 1356, 1956, 2173, 2219, 2402, 3178 |
| Bse118I | RCCGGY | 3 cut(s) | 80, 236, 3111 |
| Bse1I | ACTGG | 7 cut(s) | 93, 821, 1267, 2052, 2213, 2955, 3477 |
| Bse3DI | GCAATG | 9 cut(s) | 69, 81, 366, 1938, 1952, 2558, 2905, 3012, 3568 |
| Bse8I | GATNNNNATC | 3 cut(s) | 183, 357, 1779 |
| BseBI | CCWGG | 5 cut(s) | 919, 1442, 1470, 1589, 2174 |
| BseDI | CCNNGG | 6 cut(s) | 474, 475, 917, 918, 2172, 2325 |
| BseGI | GGATG | 7 cut(s) | 1075, 1576, 1584, 1896, 3286, 3599, 3699 |
| BseJI | GATNNNNATC | 3 cut(s) | 183, 357, 1779 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 618, 1356, 1956, 2173, 2219, 2402, 3178 |
| BseMI | GCAATG | 9 cut(s) | 69, 81, 366, 1938, 1952, 2558, 2905, 3012, 3568 |
| BseMII | CTCAG | 7 cut(s) | 605, 843, 962, 1134, 1236, 2411, 2811 |
| BseNI | ACTGG | 7 cut(s) | 93, 821, 1267, 2052, 2213, 2955, 3477 |
| BseRI | GAGGAG | 5 cut(s) | 1046, 1049, 1181, 2385, 2669 |
| BseYI | CCCAGC | 1 cut(s) | 2983 |
| BsgI | GTGCAG | 4 cut(s) | 2170, 2943, 3147, 3660 |
| BshFI | GGCC | 6 cut(s) | 686, 1748, 2029, 2165, 2198, 3043 |
| BshTI | ACCGGT | 1 cut(s) | 80 |
| BsiHKAI | GWGCWC | 4 cut(s) | 54, 488, 583, 1251 |
| BsiHKCI | CYCGRG | 1 cut(s) | 475 |
| BsiSI | CCGG | 4 cut(s) | 81, 237, 476, 3112 |
| BslFI | GGGAC | 4 cut(s) | 803, 900, 2065, 3698 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 618, 1356, 1956, 2173, 2219, 2402, 3178 |
| BsmAI | GTCTC | 2 cut(s) | 594, 2649 |
| BsmFI | GGGAC | 4 cut(s) | 803, 900, 2065, 3698 |
| BsmI | GAATGC | 1 cut(s) | 2006 |
| BsnI | GGCC | 6 cut(s) | 686, 1748, 2029, 2165, 2198, 3043 |
| BsoBI | CYCGRG | 1 cut(s) | 475 |
| Bsp1286I | GDGCHC | 4 cut(s) | 54, 488, 583, 1251 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 1117, 2544 |
| BspACI | CCGC | 8 cut(s) | 398, 449, 1121, 1957, 2249, 2971, 3577, 3618 |
| BspANI | GGCC | 6 cut(s) | 686, 1748, 2029, 2165, 2198, 3043 |
| BspCNI | CTCAG | 7 cut(s) | 604, 844, 963, 1135, 1237, 2410, 2812 |
| BspHI | TCATGA | 1 cut(s) | 3106 |
| BspLI | GGNNCC | 4 cut(s) | 799, 2053, 2054, 2955 |
| BspMAI | CTGCAG | 1 cut(s) | 2671 |
| BspMI | ACCTGC | 1 cut(s) | 2950 |
| BspPI | GGATC | 6 cut(s) | 360, 1341, 1989, 3111, 3504, 3568 |
| BspQI | GCTCTTC | 2 cut(s) | 858, 1093 |
| BspTI | CTTAAG | 2 cut(s) | 2963, 3635 |
| BsrDI | GCAATG | 9 cut(s) | 69, 81, 366, 1938, 1952, 2558, 2905, 3012, 3568 |
| BsrFI | RCCGGY | 3 cut(s) | 80, 236, 3111 |
| BsrI | ACTGG | 7 cut(s) | 93, 821, 1267, 2052, 2213, 2955, 3477 |
| BssAI | RCCGGY | 3 cut(s) | 80, 236, 3111 |
| BssECI | CCNNGG | 6 cut(s) | 474, 475, 917, 918, 2172, 2325 |
| BssNAI | GTATAC | 1 cut(s) | 86 |
| BssSI | CACGAG | 1 cut(s) | 300 |
| BssT1I | CCWWGG | 1 cut(s) | 2325 |
| Bst1107I | GTATAC | 1 cut(s) | 86 |
| Bst2BI | CACGAG | 1 cut(s) | 300 |
| Bst2UI | CCWGG | 5 cut(s) | 919, 1442, 1470, 1589, 2174 |
| Bst6I | CTCTTC | 4 cut(s) | 858, 1093, 2376, 2880 |
| BstAFI | CTTAAG | 2 cut(s) | 2963, 3635 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 650, 1330 |
| BstBAI | YACGTR | 1 cut(s) | 1367 |
| BstEII | GGTNACC | 1 cut(s) | 2702 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 3176 |
| BstF5I | GGATG | 7 cut(s) | 1075, 1576, 1584, 1896, 3286, 3599, 3699 |
| BstH2I | RGCGCY | 2 cut(s) | 2258, 3585 |
| BstHHI | GCGC | 3 cut(s) | 2257, 2932, 3584 |
| BstMAI | GTCTC | 2 cut(s) | 594, 2649 |
| BstNI | CCWGG | 5 cut(s) | 919, 1442, 1470, 1589, 2174 |
| BstNSI | RCATGY | 1 cut(s) | 3119 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 3456 |
| BstPI | GGTNACC | 1 cut(s) | 2702 |
| BstSCI | CCNGG | 7 cut(s) | 474, 475, 917, 1440, 1468, 1587, 2172 |
| BstSFI | CTRYAG | 4 cut(s) | 2282, 2490, 2667, 2808 |
| BstV2I | GAAGAC | 1 cut(s) | 3573 |
| BstX2I | RGATCY | 3 cut(s) | 1346, 2593, 3060 |
| BstYI | RGATCY | 3 cut(s) | 1346, 2593, 3060 |
| BstZ17I | GTATAC | 1 cut(s) | 86 |
| BsuRI | GGCC | 6 cut(s) | 686, 1748, 2029, 2165, 2198, 3043 |
| BtgZI | GCGATG | 2 cut(s) | 255, 625 |
| BtsCI | GGATG | 7 cut(s) | 1075, 1576, 1584, 1896, 3286, 3599, 3699 |
| BtsI | GCAGTG | 1 cut(s) | 2276 |
| BtsIMutI | CAGTG | 9 cut(s) | 687, 813, 828, 990, 1242, 2045, 2276, 2499, 2869 |
| BveI | ACCTGC | 1 cut(s) | 2950 |
| CciI | TCATGA | 1 cut(s) | 3106 |
| CfoI | GCGC | 3 cut(s) | 2257, 2932, 3584 |
| Cfr10I | RCCGGY | 3 cut(s) | 80, 236, 3111 |
| Cfr13I | GGNCC | 6 cut(s) | 797, 2052, 2093, 2164, 2734, 3260 |
| Cfr9I | CCCGGG | 1 cut(s) | 475 |
| CseI | GACGC | 1 cut(s) | 837 |
| Csp6I | GTAC | 7 cut(s) | 744, 877, 1236, 1877, 2532, 3147, 3470 |
| CspAI | ACCGGT | 1 cut(s) | 80 |
| CviQI | GTAC | 7 cut(s) | 744, 877, 1236, 1877, 2532, 3147, 3470 |
| DraI | TTTAAA | 2 cut(s) | 172, 1198 |
| DraIII | CACNNNGTG | 1 cut(s) | 3277 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 3116 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 3116 |
| EaeI | YGGCCR | 1 cut(s) | 2196 |
| Eam1104I | CTCTTC | 4 cut(s) | 858, 1093, 2376, 2880 |
| EarI | CTCTTC | 4 cut(s) | 858, 1093, 2376, 2880 |
| Ecl136II | GAGCTC | 1 cut(s) | 1249 |
| Eco130I | CCWWGG | 1 cut(s) | 2325 |
| Eco24I | GRGCYC | 1 cut(s) | 1251 |
| Eco32I | GATATC | 1 cut(s) | 514 |
| Eco47I | GGWCC | 5 cut(s) | 797, 2052, 2093, 2734, 3260 |
| Eco47III | AGCGCT | 2 cut(s) | 2256, 3583 |
| Eco53kI | GAGCTC | 1 cut(s) | 1249 |
| Eco57I | CTGAAG | 1 cut(s) | 1668 |
| Eco88I | CYCGRG | 1 cut(s) | 475 |
| Eco91I | GGTNACC | 1 cut(s) | 2702 |
| EcoICRI | GAGCTC | 1 cut(s) | 1249 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 3176 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2052 |
| EcoO65I | GGTNACC | 1 cut(s) | 2702 |
| EcoRI | GAATTC | 1 cut(s) | 2059 |
| EcoRII | CCWGG | 5 cut(s) | 917, 1440, 1468, 1587, 2172 |
| EcoRV | GATATC | 1 cut(s) | 514 |
| EcoT14I | CCWWGG | 1 cut(s) | 2325 |
| EcoT22I | ATGCAT | 1 cut(s) | 641 |
| EcoT38I | GRGCYC | 1 cut(s) | 1251 |
| ErhI | CCWWGG | 1 cut(s) | 2325 |
| FaqI | GGGAC | 4 cut(s) | 803, 900, 2065, 3698 |
| FauNDI | CATATG | 2 cut(s) | 2157, 2677 |
| FbaI | TGATCA | 3 cut(s) | 3214, 3240, 3400 |
| FblI | GTMKAC | 2 cut(s) | 85, 1829 |
| FokI | GGATG | 7 cut(s) | 1082, 1563, 1571, 1903, 3293, 3586, 3686 |
| FriOI | GRGCYC | 1 cut(s) | 1251 |
| FspBI | CTAG | 6 cut(s) | 188, 893, 1599, 2363, 3332, 3395 |
| GlaI | GCGC | 3 cut(s) | 2256, 2931, 3583 |
| GsaI | CCCAGC | 1 cut(s) | 2987 |
| GsuI | CTGGAG | 1 cut(s) | 110 |
| HaeII | RGCGCY | 2 cut(s) | 2258, 3585 |
| HaeIII | GGCC | 6 cut(s) | 686, 1748, 2029, 2165, 2198, 3043 |
| HapII | CCGG | 4 cut(s) | 81, 237, 476, 3112 |
| HgaI | GACGC | 1 cut(s) | 837 |
| HhaI | GCGC | 3 cut(s) | 2257, 2932, 3584 |
| Hin6I | GCGC | 3 cut(s) | 2255, 2930, 3582 |
| HinP1I | GCGC | 3 cut(s) | 2255, 2930, 3582 |
| HincII | GTYRAC | 2 cut(s) | 1830, 2001 |
| HindII | GTYRAC | 2 cut(s) | 1830, 2001 |
| HindIII | AAGCTT | 3 cut(s) | 658, 1482, 3443 |
| HinfI | GANTC | 9 cut(s) | 303, 430, 739, 1303, 2144, 2366, 2633, 3355, 3485 |
| HpaII | CCGG | 4 cut(s) | 81, 237, 476, 3112 |
| HphI | GGTGA | 3 cut(s) | 1679, 1850, 2483 |
| Hpy166II | GTNNAC | 6 cut(s) | 86, 1670, 1830, 2001, 2276, 3322 |
| Hpy8I | GTNNAC | 6 cut(s) | 86, 1670, 1830, 2001, 2276, 3322 |
| HpyCH4IV | ACGT | 2 cut(s) | 1366, 1505 |
| HpySE526I | ACGT | 2 cut(s) | 1366, 1505 |
| HspAI | GCGC | 3 cut(s) | 2255, 2930, 3582 |
| KflI | GGGWCCC | 1 cut(s) | 2052 |
| KroI | GCCGGC | 1 cut(s) | 236 |
| KroNI | GCCGGC | 1 cut(s) | 238 |
| Ksp22I | TGATCA | 3 cut(s) | 3214, 3240, 3400 |
| LguI | GCTCTTC | 2 cut(s) | 858, 1093 |
| LmnI | GCTCC | 2 cut(s) | 277, 3701 |
| MaeI | CTAG | 6 cut(s) | 188, 893, 1599, 2363, 3332, 3395 |
| MaeII | ACGT | 2 cut(s) | 1366, 1505 |
| MaeIII | GTNAC | 8 cut(s) | 362, 974, 1270, 1490, 1628, 1639, 1755, 2702 |
| MflI | RGATCY | 3 cut(s) | 1346, 2593, 3060 |
| MhlI | GDGCHC | 4 cut(s) | 54, 488, 583, 1251 |
| MlyI | GAGTC | 5 cut(s) | 312, 733, 1312, 2360, 2642 |
| MmeI | TCCRAC | 1 cut(s) | 1067 |
| Mph1103I | ATGCAT | 1 cut(s) | 641 |
| MroNI | GCCGGC | 1 cut(s) | 236 |
| MroXI | GAANNNNTTC | 5 cut(s) | 699, 867, 900, 948, 3595 |
| MslI | CAYNNNNRTG | 6 cut(s) | 74, 380, 2192, 2563, 3313, 3408 |
| MspA1I | CMGCKG | 4 cut(s) | 1646, 2987, 3131, 3467 |
| MspCI | CTTAAG | 2 cut(s) | 2963, 3635 |
| MspI | CCGG | 4 cut(s) | 81, 237, 476, 3112 |
| MspR9I | CCNGG | 7 cut(s) | 476, 477, 919, 1442, 1470, 1589, 2174 |
| Mva1269I | GAATGC | 1 cut(s) | 2006 |
| MvaI | CCWGG | 5 cut(s) | 919, 1442, 1470, 1589, 2174 |
| NaeI | GCCGGC | 1 cut(s) | 238 |
| NciI | CCSGG | 2 cut(s) | 476, 477 |
| NdeI | CATATG | 2 cut(s) | 2157, 2677 |
| NgoMIV | GCCGGC | 1 cut(s) | 236 |
| NlaIV | GGNNCC | 4 cut(s) | 799, 2053, 2054, 2955 |
| NmeAIII | GCCGAG | 1 cut(s) | 2519 |
| NmuCI | GTSAC | 5 cut(s) | 362, 1270, 1490, 1639, 1755 |
| NsiI | ATGCAT | 1 cut(s) | 641 |
| NspI | RCATGY | 1 cut(s) | 3119 |
| PacI | TTAATTAA | 1 cut(s) | 2268 |
| PagI | TCATGA | 1 cut(s) | 3106 |
| PasI | CCCWGGG | 1 cut(s) | 918 |
| PciSI | GCTCTTC | 2 cut(s) | 858, 1093 |
| PctI | GAATGC | 1 cut(s) | 2006 |
| PdiI | GCCGGC | 1 cut(s) | 238 |
| PdmI | GAANNNNTTC | 5 cut(s) | 699, 867, 900, 948, 3595 |
| PfeI | GAWTC | 4 cut(s) | 430, 2144, 3355, 3485 |
| PflFI | GACNNNGTC | 1 cut(s) | 815 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2219 |
| PfoI | TCCNGGA | 1 cut(s) | 1468 |
| PinAI | ACCGGT | 1 cut(s) | 80 |
| PleI | GAGTC | 5 cut(s) | 311, 733, 1311, 2360, 2641 |
| PpsI | GAGTC | 5 cut(s) | 311, 733, 1311, 2360, 2641 |
| Ppu21I | YACGTR | 1 cut(s) | 1367 |
| PpuMI | RGGWCCY | 1 cut(s) | 2052 |
| PshAI | GACNNNNGTC | 1 cut(s) | 3456 |
| PshBI | ATTAAT | 6 cut(s) | 831, 1127, 1184, 1293, 1353, 2264 |
| Psp124BI | GAGCTC | 1 cut(s) | 1251 |
| Psp5II | RGGWCCY | 1 cut(s) | 2052 |
| Psp6I | CCWGG | 5 cut(s) | 917, 1440, 1468, 1587, 2172 |
| PspEI | GGTNACC | 1 cut(s) | 2702 |
| PspFI | CCCAGC | 1 cut(s) | 2983 |
| PspGI | CCWGG | 5 cut(s) | 917, 1440, 1468, 1587, 2172 |
| PspN4I | GGNNCC | 4 cut(s) | 799, 2053, 2054, 2955 |
| PspPI | GGNCC | 6 cut(s) | 797, 2052, 2093, 2164, 2734, 3260 |
| PspPPI | RGGWCCY | 1 cut(s) | 2052 |
| PstI | CTGCAG | 1 cut(s) | 2671 |
| PsuI | RGATCY | 3 cut(s) | 1346, 2593, 3060 |
| PsyI | GACNNNGTC | 1 cut(s) | 815 |
| PvuII | CAGCTG | 4 cut(s) | 1646, 2987, 3131, 3467 |
| RsaI | GTAC | 7 cut(s) | 745, 878, 1237, 1878, 2533, 3148, 3471 |
| RsaNI | GTAC | 7 cut(s) | 744, 877, 1236, 1877, 2532, 3147, 3470 |
| RseI | CAYNNNNRTG | 6 cut(s) | 74, 380, 2192, 2563, 3313, 3408 |
| SacI | GAGCTC | 1 cut(s) | 1251 |
| SalI | GTCGAC | 1 cut(s) | 1828 |
| SapI | GCTCTTC | 2 cut(s) | 858, 1093 |
| Sau96I | GGNCC | 6 cut(s) | 797, 2052, 2093, 2164, 2734, 3260 |
| ScaI | AGTACT | 1 cut(s) | 1237 |
| SchI | GAGTC | 5 cut(s) | 312, 733, 1312, 2360, 2642 |
| ScrFI | CCNGG | 7 cut(s) | 476, 477, 919, 1442, 1470, 1589, 2174 |
| SduI | GDGCHC | 4 cut(s) | 54, 488, 583, 1251 |
| SfcI | CTRYAG | 4 cut(s) | 2282, 2490, 2667, 2808 |
| SinI | GGWCC | 5 cut(s) | 797, 2052, 2093, 2734, 3260 |
| SmaI | CCCGGG | 1 cut(s) | 477 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 74, 380, 2192, 2563, 3313, 3408 |
| SmlI | CTYRAG | 5 cut(s) | 709, 1028, 2963, 3290, 3635 |
| SmoI | CTYRAG | 5 cut(s) | 709, 1028, 2963, 3290, 3635 |
| SsiI | CCGC | 8 cut(s) | 398, 449, 1121, 1957, 2249, 2971, 3577, 3618 |
| SspI | AATATT | 6 cut(s) | 208, 751, 1696, 2623, 2692, 2717 |
| SspMI | CTAG | 6 cut(s) | 188, 893, 1599, 2363, 3332, 3395 |
| SstI | GAGCTC | 1 cut(s) | 1251 |
| StyD4I | CCNGG | 7 cut(s) | 474, 475, 917, 1440, 1468, 1587, 2172 |
| StyI | CCWWGG | 1 cut(s) | 2325 |
| TaiI | ACGT | 2 cut(s) | 1369, 1508 |
| TaqI | TCGA | 7 cut(s) | 48, 203, 428, 1829, 1909, 2631, 2652 |
| TaqII | GACCGA | 1 cut(s) | 2081 |
| TatI | WGTACW | 6 cut(s) | 876, 1235, 1876, 2531, 3146, 3469 |
| TauI | GCSGC | 1 cut(s) | 1124 |
| TfiI | GAWTC | 4 cut(s) | 430, 2144, 3355, 3485 |
| TscAI | CASTG | 9 cut(s) | 694, 820, 828, 997, 1249, 2052, 2283, 2499, 2876 |
| TseFI | GTSAC | 5 cut(s) | 362, 1270, 1490, 1639, 1755 |
| Tsp45I | GTSAC | 5 cut(s) | 362, 1270, 1490, 1639, 1755 |
| TspGWI | ACGGA | 3 cut(s) | 1082, 1667, 2029 |
| TspMI | CCCGGG | 1 cut(s) | 475 |
| TspRI | CASTG | 9 cut(s) | 694, 820, 828, 997, 1249, 2052, 2283, 2499, 2876 |
| Tth111I | GACNNNGTC | 1 cut(s) | 815 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2219 |
| Vha464I | CTTAAG | 2 cut(s) | 2963, 3635 |
| VpaK11BI | GGWCC | 5 cut(s) | 797, 2052, 2093, 2734, 3260 |
| VspI | ATTAAT | 6 cut(s) | 831, 1127, 1184, 1293, 1353, 2264 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 3176 |
| XapI | RAATTY | 5 cut(s) | 36, 945, 2059, 2511, 2854 |
| XbaI | TCTAGA | 2 cut(s) | 187, 3394 |
| XceI | RCATGY | 1 cut(s) | 3119 |
| XmaI | CCCGGG | 1 cut(s) | 475 |
| XmiI | GTMKAC | 2 cut(s) | 85, 1829 |
| XmnI | GAANNNNTTC | 5 cut(s) | 699, 867, 900, 948, 3595 |
| XspI | CTAG | 6 cut(s) | 188, 893, 1599, 2363, 3332, 3395 |
| ZrmI | AGTACT | 1 cut(s) | 1237 |
| Zsp2I | ATGCAT | 1 cut(s) | 641 |