Cullin-associated NEDD8-dissociated protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G02560 AT2G02560 |
| fragaria_vesca | FvH4_7g33400 FvH4_7g33400 |
| malus_domestica | MD01G1232300.v1.1 MD07G1304100.v1.1 |
| prunus_persica | Prupe.2G322700_v2.0.a1 Prupe.2G322700_v2.0.a1 Prupe.2G322700_v2.0.a1 |
| pyrus_communis | pycom01g24070 pycom07g27710 |
| rosa_chinensis | RchiOBHm_Chr1g0383371 |
| rosa_laevigata | RLG00000026107 |
| rosa_multiflora | Rmu_co8130632.1_g000001 Rmu_sc0007173.1_g000011 Rmu_sc0019557.1_g000001 Rmu_sc0020036.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00277350 |
| rosa_rugosa | Rorug01G0441000 |
| rosa_samantha | Rh1AG466900 Rh1BG424200 Rh1CG437300 Rh1DG456900 |
| rosa_wichuraiana | Rw1G040570 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 3173 |
| Acc36I | ACCTGC | 1 cut(s) | 3007 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2276 |
| AccI | GTMKAC | 2 cut(s) | 142, 1886 |
| AciI | CCGC | 6 cut(s) | 1178, 2014, 2306, 3028, 3634, 3675 |
| AclWI | GGATC | 6 cut(s) | 417, 1398, 2046, 3168, 3561, 3625 |
| AcoI | YGGCCR | 1 cut(s) | 2253 |
| AcsI | RAATTY | 6 cut(s) | 32, 93, 1002, 2116, 2568, 2911 |
| AcuI | CTGAAG | 1 cut(s) | 1725 |
| AdeI | CACNNNGTG | 1 cut(s) | 3334 |
| AfaI | GTAC | 7 cut(s) | 802, 935, 1294, 1935, 2590, 3205, 3528 |
| AfeI | AGCGCT | 1 cut(s) | 2313 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 675, 1413, 2013, 2230, 2276, 2459, 3235 |
| AflII | CTTAAG | 2 cut(s) | 3020, 3692 |
| AhlI | ACTAGT | 1 cut(s) | 899 |
| AjnI | CCWGG | 5 cut(s) | 974, 1497, 1525, 1644, 2229 |
| Alw21I | GWGCWC | 5 cut(s) | 111, 545, 640, 1308, 3643 |
| Alw26I | GTCTC | 2 cut(s) | 651, 2706 |
| AlwI | GGATC | 6 cut(s) | 417, 1398, 2046, 3168, 3561, 3625 |
| Ama87I | CYCGRG | 1 cut(s) | 532 |
| Aor51HI | AGCGCT | 1 cut(s) | 2313 |
| AoxI | GGCC | 7 cut(s) | 666, 741, 1803, 2084, 2220, 2253, 3098 |
| ApoI | RAATTY | 6 cut(s) | 32, 93, 1002, 2116, 2568, 2911 |
| AseI | ATTAAT | 6 cut(s) | 888, 1184, 1241, 1350, 1410, 2321 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 756, 924, 957, 1005 |
| AspLEI | GCGC | 3 cut(s) | 949, 2314, 2989 |
| AspS9I | GGNCC | 6 cut(s) | 854, 2109, 2150, 2221, 2791, 3317 |
| AsuC2I | CCSGG | 2 cut(s) | 533, 534 |
| AsuHPI | GGTGA | 4 cut(s) | 1736, 1907, 2150, 2540 |
| AvaI | CYCGRG | 1 cut(s) | 532 |
| AvaII | GGWCC | 5 cut(s) | 854, 2109, 2150, 2791, 3317 |
| BanII | GRGCYC | 1 cut(s) | 1308 |
| BauI | CACGAG | 1 cut(s) | 357 |
| BbsI | GAAGAC | 1 cut(s) | 3630 |
| Bbv12I | GWGCWC | 5 cut(s) | 111, 545, 640, 1308, 3643 |
| BceAI | ACGGC | 1 cut(s) | 2235 |
| BciT130I | CCWGG | 5 cut(s) | 976, 1499, 1527, 1646, 2231 |
| BclI | TGATCA | 3 cut(s) | 3271, 3297, 3457 |
| BcnI | CCSGG | 2 cut(s) | 533, 534 |
| BcoDI | GTCTC | 2 cut(s) | 651, 2706 |
| BcuI | ACTAGT | 1 cut(s) | 899 |
| BfaI | CTAG | 7 cut(s) | 245, 900, 950, 1656, 2420, 3389, 3452 |
| BfmI | CTRYAG | 4 cut(s) | 2339, 2547, 2724, 2865 |
| BfoI | RGCGCY | 2 cut(s) | 950, 2315 |
| BfrI | CTTAAG | 2 cut(s) | 3020, 3692 |
| BfuAI | ACCTGC | 1 cut(s) | 3007 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 2092 |
| BglII | AGATCT | 2 cut(s) | 2650, 3117 |
| BlpI | GCTNAGC | 2 cut(s) | 1174, 2601 |
| BmcAI | AGTACT | 1 cut(s) | 1294 |
| Bme1390I | CCNGG | 7 cut(s) | 533, 534, 976, 1499, 1527, 1646, 2231 |
| Bme18I | GGWCC | 5 cut(s) | 854, 2109, 2150, 2791, 3317 |
| BmeT110I | CYCGRG | 1 cut(s) | 532 |
| BmgT120I | GGNCC | 6 cut(s) | 854, 2109, 2150, 2221, 2791, 3317 |
| BmiI | GGNNCC | 5 cut(s) | 50, 856, 2110, 2111, 3012 |
| BmrFI | CCNGG | 7 cut(s) | 533, 534, 976, 1499, 1527, 1646, 2231 |
| BmrI | ACTGGG | 3 cut(s) | 872, 2114, 2264 |
| BmuI | ACTGGG | 3 cut(s) | 872, 2114, 2264 |
| BoxI | GACNNNNGTC | 1 cut(s) | 3513 |
| BpiI | GAAGAC | 1 cut(s) | 3630 |
| BpmI | CTGGAG | 1 cut(s) | 167 |
| Bpu10I | CCTNAGC | 1 cut(s) | 965 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 1174, 2601 |
| BpuEI | CTTGAG | 3 cut(s) | 787, 1106, 3368 |
| BpuMI | CCSGG | 2 cut(s) | 533, 534 |
| BsaAI | YACGTR | 1 cut(s) | 1424 |
| BsaBI | GATNNNNATC | 3 cut(s) | 240, 414, 1836 |
| BsaJI | CCNNGG | 6 cut(s) | 531, 532, 974, 975, 2229, 2382 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 82, 112, 2705, 2735 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 675, 1413, 2013, 2230, 2276, 2459, 3235 |
| Bse118I | RCCGGY | 2 cut(s) | 293, 3168 |
| Bse1I | ACTGG | 8 cut(s) | 142, 150, 878, 1324, 2109, 2270, 3012, 3534 |
| Bse3DI | GCAATG | 8 cut(s) | 126, 138, 423, 2009, 2615, 2962, 3069, 3625 |
| Bse8I | GATNNNNATC | 3 cut(s) | 240, 414, 1836 |
| BseBI | CCWGG | 5 cut(s) | 976, 1499, 1527, 1646, 2231 |
| BseDI | CCNNGG | 6 cut(s) | 531, 532, 974, 975, 2229, 2382 |
| BseGI | GGATG | 8 cut(s) | 1132, 1288, 1633, 1641, 1953, 3343, 3656, 3756 |
| BseJI | GATNNNNATC | 3 cut(s) | 240, 414, 1836 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 675, 1413, 2013, 2230, 2276, 2459, 3235 |
| BseMI | GCAATG | 8 cut(s) | 126, 138, 423, 2009, 2615, 2962, 3069, 3625 |
| BseMII | CTCAG | 8 cut(s) | 521, 662, 900, 1019, 1191, 1293, 2468, 2868 |
| BseNI | ACTGG | 8 cut(s) | 142, 150, 878, 1324, 2109, 2270, 3012, 3534 |
| BseRI | GAGGAG | 5 cut(s) | 1103, 1106, 1238, 2442, 2726 |
| BseYI | CCCAGC | 1 cut(s) | 3040 |
| BsgI | GTGCAG | 4 cut(s) | 2227, 3000, 3204, 3717 |
| BshFI | GGCC | 7 cut(s) | 668, 743, 1805, 2086, 2222, 2255, 3100 |
| BsiHKAI | GWGCWC | 5 cut(s) | 111, 545, 640, 1308, 3643 |
| BsiHKCI | CYCGRG | 1 cut(s) | 532 |
| BsiSI | CCGG | 3 cut(s) | 294, 533, 3169 |
| BslFI | GGGAC | 5 cut(s) | 860, 957, 1887, 2122, 3755 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 675, 1413, 2013, 2230, 2276, 2459, 3235 |
| BsmAI | GTCTC | 2 cut(s) | 651, 2706 |
| BsmFI | GGGAC | 5 cut(s) | 860, 957, 1887, 2122, 3755 |
| BsmI | GAATGC | 2 cut(s) | 28, 2063 |
| BsnI | GGCC | 7 cut(s) | 668, 743, 1805, 2086, 2222, 2255, 3100 |
| BsoBI | CYCGRG | 1 cut(s) | 532 |
| Bsp1286I | GDGCHC | 5 cut(s) | 111, 545, 640, 1308, 3643 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 1174, 2601 |
| BspACI | CCGC | 6 cut(s) | 1178, 2014, 2306, 3028, 3634, 3675 |
| BspANI | GGCC | 7 cut(s) | 668, 743, 1805, 2086, 2222, 2255, 3100 |
| BspCNI | CTCAG | 8 cut(s) | 520, 661, 901, 1020, 1192, 1294, 2467, 2869 |
| BspHI | TCATGA | 1 cut(s) | 3163 |
| BspLI | GGNNCC | 5 cut(s) | 50, 856, 2110, 2111, 3012 |
| BspMAI | CTGCAG | 1 cut(s) | 2728 |
| BspMI | ACCTGC | 1 cut(s) | 3007 |
| BspPI | GGATC | 6 cut(s) | 417, 1398, 2046, 3168, 3561, 3625 |
| BspQI | GCTCTTC | 2 cut(s) | 915, 1150 |
| BspTI | CTTAAG | 2 cut(s) | 3020, 3692 |
| BsrDI | GCAATG | 8 cut(s) | 126, 138, 423, 2009, 2615, 2962, 3069, 3625 |
| BsrFI | RCCGGY | 2 cut(s) | 293, 3168 |
| BsrI | ACTGG | 8 cut(s) | 142, 150, 878, 1324, 2109, 2270, 3012, 3534 |
| BssAI | RCCGGY | 2 cut(s) | 293, 3168 |
| BssECI | CCNNGG | 6 cut(s) | 531, 532, 974, 975, 2229, 2382 |
| BssNAI | GTATAC | 1 cut(s) | 143 |
| BssSI | CACGAG | 1 cut(s) | 357 |
| BssT1I | CCWWGG | 1 cut(s) | 2382 |
| Bst1107I | GTATAC | 1 cut(s) | 143 |
| Bst2BI | CACGAG | 1 cut(s) | 357 |
| Bst2UI | CCWGG | 5 cut(s) | 976, 1499, 1527, 1646, 2231 |
| Bst6I | CTCTTC | 4 cut(s) | 915, 1150, 2433, 2937 |
| BstAFI | CTTAAG | 2 cut(s) | 3020, 3692 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 707, 1387 |
| BstBAI | YACGTR | 1 cut(s) | 1424 |
| BstEII | GGTNACC | 1 cut(s) | 2759 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 3233 |
| BstF5I | GGATG | 8 cut(s) | 1132, 1288, 1633, 1641, 1953, 3343, 3656, 3756 |
| BstH2I | RGCGCY | 2 cut(s) | 950, 2315 |
| BstHHI | GCGC | 3 cut(s) | 949, 2314, 2989 |
| BstMAI | GTCTC | 2 cut(s) | 651, 2706 |
| BstNI | CCWGG | 5 cut(s) | 976, 1499, 1527, 1646, 2231 |
| BstNSI | RCATGY | 1 cut(s) | 3176 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 3513 |
| BstPI | GGTNACC | 1 cut(s) | 2759 |
| BstSCI | CCNGG | 7 cut(s) | 531, 532, 974, 1497, 1525, 1644, 2229 |
| BstSFI | CTRYAG | 4 cut(s) | 2339, 2547, 2724, 2865 |
| BstV2I | GAAGAC | 1 cut(s) | 3630 |
| BstX2I | RGATCY | 3 cut(s) | 1403, 2650, 3117 |
| BstYI | RGATCY | 3 cut(s) | 1403, 2650, 3117 |
| BstZ17I | GTATAC | 1 cut(s) | 143 |
| BsuRI | GGCC | 7 cut(s) | 668, 743, 1805, 2086, 2222, 2255, 3100 |
| BtgZI | GCGATG | 2 cut(s) | 312, 682 |
| BtsCI | GGATG | 8 cut(s) | 1132, 1288, 1633, 1641, 1953, 3343, 3656, 3756 |
| BtsI | GCAGTG | 2 cut(s) | 2333, 3643 |
| BveI | ACCTGC | 1 cut(s) | 3007 |
| CciI | TCATGA | 1 cut(s) | 3163 |
| CfoI | GCGC | 3 cut(s) | 949, 2314, 2989 |
| Cfr10I | RCCGGY | 2 cut(s) | 293, 3168 |
| Cfr13I | GGNCC | 6 cut(s) | 854, 2109, 2150, 2221, 2791, 3317 |
| Cfr9I | CCCGGG | 1 cut(s) | 532 |
| Csp6I | GTAC | 7 cut(s) | 801, 934, 1293, 1934, 2589, 3204, 3527 |
| CviQI | GTAC | 7 cut(s) | 801, 934, 1293, 1934, 2589, 3204, 3527 |
| DraI | TTTAAA | 2 cut(s) | 229, 1255 |
| DraIII | CACNNNGTG | 1 cut(s) | 3334 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 3173 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 3173 |
| EaeI | YGGCCR | 1 cut(s) | 2253 |
| Eam1104I | CTCTTC | 4 cut(s) | 915, 1150, 2433, 2937 |
| EarI | CTCTTC | 4 cut(s) | 915, 1150, 2433, 2937 |
| Ecl136II | GAGCTC | 1 cut(s) | 1306 |
| Eco130I | CCWWGG | 1 cut(s) | 2382 |
| Eco24I | GRGCYC | 1 cut(s) | 1308 |
| Eco32I | GATATC | 1 cut(s) | 571 |
| Eco47I | GGWCC | 5 cut(s) | 854, 2109, 2150, 2791, 3317 |
| Eco47III | AGCGCT | 1 cut(s) | 2313 |
| Eco53kI | GAGCTC | 1 cut(s) | 1306 |
| Eco57I | CTGAAG | 1 cut(s) | 1725 |
| Eco88I | CYCGRG | 1 cut(s) | 532 |
| Eco91I | GGTNACC | 1 cut(s) | 2759 |
| EcoICRI | GAGCTC | 1 cut(s) | 1306 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 3233 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2109 |
| EcoO65I | GGTNACC | 1 cut(s) | 2759 |
| EcoRI | GAATTC | 1 cut(s) | 2116 |
| EcoRII | CCWGG | 5 cut(s) | 974, 1497, 1525, 1644, 2229 |
| EcoRV | GATATC | 1 cut(s) | 571 |
| EcoT14I | CCWWGG | 1 cut(s) | 2382 |
| EcoT22I | ATGCAT | 2 cut(s) | 28, 698 |
| EcoT38I | GRGCYC | 1 cut(s) | 1308 |
| ErhI | CCWWGG | 1 cut(s) | 2382 |
| FaqI | GGGAC | 5 cut(s) | 860, 957, 1887, 2122, 3755 |
| FauNDI | CATATG | 2 cut(s) | 2214, 2734 |
| FbaI | TGATCA | 3 cut(s) | 3271, 3297, 3457 |
| FblI | GTMKAC | 2 cut(s) | 142, 1886 |
| FokI | GGATG | 8 cut(s) | 1139, 1295, 1620, 1628, 1960, 3350, 3643, 3743 |
| FriOI | GRGCYC | 1 cut(s) | 1308 |
| FspBI | CTAG | 7 cut(s) | 245, 900, 950, 1656, 2420, 3389, 3452 |
| GlaI | GCGC | 3 cut(s) | 948, 2313, 2988 |
| GsaI | CCCAGC | 1 cut(s) | 3044 |
| GsuI | CTGGAG | 1 cut(s) | 167 |
| HaeII | RGCGCY | 2 cut(s) | 950, 2315 |
| HaeIII | GGCC | 7 cut(s) | 668, 743, 1805, 2086, 2222, 2255, 3100 |
| HapII | CCGG | 3 cut(s) | 294, 533, 3169 |
| HhaI | GCGC | 3 cut(s) | 949, 2314, 2989 |
| Hin6I | GCGC | 3 cut(s) | 947, 2312, 2987 |
| HinP1I | GCGC | 3 cut(s) | 947, 2312, 2987 |
| HincII | GTYRAC | 2 cut(s) | 1887, 2058 |
| HindII | GTYRAC | 2 cut(s) | 1887, 2058 |
| HindIII | AAGCTT | 3 cut(s) | 715, 1539, 3500 |
| HinfI | GANTC | 8 cut(s) | 10, 796, 1360, 2201, 2423, 2690, 3412, 3542 |
| HpaII | CCGG | 3 cut(s) | 294, 533, 3169 |
| HphI | GGTGA | 4 cut(s) | 1736, 1907, 2150, 2540 |
| Hpy166II | GTNNAC | 5 cut(s) | 143, 1727, 1887, 2058, 3379 |
| Hpy8I | GTNNAC | 5 cut(s) | 143, 1727, 1887, 2058, 3379 |
| HpyCH4IV | ACGT | 1 cut(s) | 1423 |
| HpySE526I | ACGT | 1 cut(s) | 1423 |
| HspAI | GCGC | 3 cut(s) | 947, 2312, 2987 |
| KflI | GGGWCCC | 1 cut(s) | 2109 |
| KroI | GCCGGC | 1 cut(s) | 293 |
| KroNI | GCCGGC | 1 cut(s) | 295 |
| Ksp22I | TGATCA | 3 cut(s) | 3271, 3297, 3457 |
| LguI | GCTCTTC | 2 cut(s) | 915, 1150 |
| LmnI | GCTCC | 3 cut(s) | 48, 334, 3758 |
| MaeI | CTAG | 7 cut(s) | 245, 900, 950, 1656, 2420, 3389, 3452 |
| MaeII | ACGT | 1 cut(s) | 1423 |
| MaeIII | GTNAC | 8 cut(s) | 419, 1031, 1327, 1547, 1685, 1696, 1812, 2759 |
| MfeI | CAATTG | 1 cut(s) | 3651 |
| MflI | RGATCY | 3 cut(s) | 1403, 2650, 3117 |
| MhlI | GDGCHC | 5 cut(s) | 111, 545, 640, 1308, 3643 |
| MlyI | GAGTC | 4 cut(s) | 790, 1369, 2417, 2699 |
| MmeI | TCCRAC | 1 cut(s) | 1124 |
| Mph1103I | ATGCAT | 2 cut(s) | 28, 698 |
| MroNI | GCCGGC | 1 cut(s) | 293 |
| MroXI | GAANNNNTTC | 4 cut(s) | 756, 924, 957, 1005 |
| MslI | CAYNNNNRTG | 6 cut(s) | 131, 437, 2249, 2620, 3370, 3465 |
| MspA1I | CMGCKG | 5 cut(s) | 1703, 1976, 3044, 3188, 3524 |
| MspCI | CTTAAG | 2 cut(s) | 3020, 3692 |
| MspI | CCGG | 3 cut(s) | 294, 533, 3169 |
| MspR9I | CCNGG | 7 cut(s) | 533, 534, 976, 1499, 1527, 1646, 2231 |
| MunI | CAATTG | 1 cut(s) | 3651 |
| Mva1269I | GAATGC | 2 cut(s) | 28, 2063 |
| MvaI | CCWGG | 5 cut(s) | 976, 1499, 1527, 1646, 2231 |
| NaeI | GCCGGC | 1 cut(s) | 295 |
| NciI | CCSGG | 2 cut(s) | 533, 534 |
| NdeI | CATATG | 2 cut(s) | 2214, 2734 |
| NgoMIV | GCCGGC | 1 cut(s) | 293 |
| NlaIV | GGNNCC | 5 cut(s) | 50, 856, 2110, 2111, 3012 |
| NmeAIII | GCCGAG | 1 cut(s) | 2576 |
| NmuCI | GTSAC | 5 cut(s) | 419, 1327, 1547, 1696, 1812 |
| NsiI | ATGCAT | 2 cut(s) | 28, 698 |
| NspI | RCATGY | 1 cut(s) | 3176 |
| PacI | TTAATTAA | 1 cut(s) | 2325 |
| PagI | TCATGA | 1 cut(s) | 3163 |
| PasI | CCCWGGG | 1 cut(s) | 975 |
| PciSI | GCTCTTC | 2 cut(s) | 915, 1150 |
| PctI | GAATGC | 2 cut(s) | 28, 2063 |
| PdiI | GCCGGC | 1 cut(s) | 295 |
| PdmI | GAANNNNTTC | 4 cut(s) | 756, 924, 957, 1005 |
| PfeI | GAWTC | 4 cut(s) | 10, 2201, 3412, 3542 |
| PflFI | GACNNNGTC | 1 cut(s) | 872 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2276 |
| PfoI | TCCNGGA | 1 cut(s) | 1525 |
| PleI | GAGTC | 4 cut(s) | 790, 1368, 2417, 2698 |
| PpsI | GAGTC | 4 cut(s) | 790, 1368, 2417, 2698 |
| Ppu21I | YACGTR | 1 cut(s) | 1424 |
| PpuMI | RGGWCCY | 1 cut(s) | 2109 |
| PshAI | GACNNNNGTC | 1 cut(s) | 3513 |
| PshBI | ATTAAT | 6 cut(s) | 888, 1184, 1241, 1350, 1410, 2321 |
| Psp124BI | GAGCTC | 1 cut(s) | 1308 |
| Psp5II | RGGWCCY | 1 cut(s) | 2109 |
| Psp6I | CCWGG | 5 cut(s) | 974, 1497, 1525, 1644, 2229 |
| PspEI | GGTNACC | 1 cut(s) | 2759 |
| PspFI | CCCAGC | 1 cut(s) | 3040 |
| PspGI | CCWGG | 5 cut(s) | 974, 1497, 1525, 1644, 2229 |
| PspN4I | GGNNCC | 5 cut(s) | 50, 856, 2110, 2111, 3012 |
| PspPI | GGNCC | 6 cut(s) | 854, 2109, 2150, 2221, 2791, 3317 |
| PspPPI | RGGWCCY | 1 cut(s) | 2109 |
| PstI | CTGCAG | 1 cut(s) | 2728 |
| PsuI | RGATCY | 3 cut(s) | 1403, 2650, 3117 |
| PsyI | GACNNNGTC | 1 cut(s) | 872 |
| PvuII | CAGCTG | 5 cut(s) | 1703, 1976, 3044, 3188, 3524 |
| RsaI | GTAC | 7 cut(s) | 802, 935, 1294, 1935, 2590, 3205, 3528 |
| RsaNI | GTAC | 7 cut(s) | 801, 934, 1293, 1934, 2589, 3204, 3527 |
| RseI | CAYNNNNRTG | 6 cut(s) | 131, 437, 2249, 2620, 3370, 3465 |
| SacI | GAGCTC | 1 cut(s) | 1308 |
| SalI | GTCGAC | 1 cut(s) | 1885 |
| SapI | GCTCTTC | 2 cut(s) | 915, 1150 |
| Sau96I | GGNCC | 6 cut(s) | 854, 2109, 2150, 2221, 2791, 3317 |
| ScaI | AGTACT | 1 cut(s) | 1294 |
| SchI | GAGTC | 4 cut(s) | 790, 1369, 2417, 2699 |
| ScrFI | CCNGG | 7 cut(s) | 533, 534, 976, 1499, 1527, 1646, 2231 |
| SduI | GDGCHC | 5 cut(s) | 111, 545, 640, 1308, 3643 |
| SfcI | CTRYAG | 4 cut(s) | 2339, 2547, 2724, 2865 |
| SinI | GGWCC | 5 cut(s) | 854, 2109, 2150, 2791, 3317 |
| SmaI | CCCGGG | 1 cut(s) | 534 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 131, 437, 2249, 2620, 3370, 3465 |
| SmlI | CTYRAG | 5 cut(s) | 766, 1085, 3020, 3347, 3692 |
| SmoI | CTYRAG | 5 cut(s) | 766, 1085, 3020, 3347, 3692 |
| SpeI | ACTAGT | 1 cut(s) | 899 |
| SsiI | CCGC | 6 cut(s) | 1178, 2014, 2306, 3028, 3634, 3675 |
| SspI | AATATT | 5 cut(s) | 265, 808, 2680, 2749, 2774 |
| SspMI | CTAG | 7 cut(s) | 245, 900, 950, 1656, 2420, 3389, 3452 |
| SstI | GAGCTC | 1 cut(s) | 1308 |
| StyD4I | CCNGG | 7 cut(s) | 531, 532, 974, 1497, 1525, 1644, 2229 |
| StyI | CCWWGG | 1 cut(s) | 2382 |
| TaiI | ACGT | 1 cut(s) | 1426 |
| TaqI | TCGA | 7 cut(s) | 8, 105, 260, 1886, 1966, 2688, 2709 |
| TaqII | GACCGA | 1 cut(s) | 2138 |
| TatI | WGTACW | 6 cut(s) | 933, 1292, 1933, 2588, 3203, 3526 |
| TauI | GCSGC | 1 cut(s) | 1181 |
| TfiI | GAWTC | 4 cut(s) | 10, 2201, 3412, 3542 |
| TseFI | GTSAC | 5 cut(s) | 419, 1327, 1547, 1696, 1812 |
| Tsp45I | GTSAC | 5 cut(s) | 419, 1327, 1547, 1696, 1812 |
| TspGWI | ACGGA | 3 cut(s) | 1139, 1724, 2086 |
| TspMI | CCCGGG | 1 cut(s) | 532 |
| Tth111I | GACNNNGTC | 1 cut(s) | 872 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2276 |
| Vha464I | CTTAAG | 2 cut(s) | 3020, 3692 |
| VpaK11BI | GGWCC | 5 cut(s) | 854, 2109, 2150, 2791, 3317 |
| VspI | ATTAAT | 6 cut(s) | 888, 1184, 1241, 1350, 1410, 2321 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 3233 |
| XapI | RAATTY | 6 cut(s) | 32, 93, 1002, 2116, 2568, 2911 |
| XbaI | TCTAGA | 2 cut(s) | 244, 3451 |
| XceI | RCATGY | 1 cut(s) | 3176 |
| XmaI | CCCGGG | 1 cut(s) | 532 |
| XmiI | GTMKAC | 2 cut(s) | 142, 1886 |
| XmnI | GAANNNNTTC | 4 cut(s) | 756, 924, 957, 1005 |
| XspI | CTAG | 7 cut(s) | 245, 900, 950, 1656, 2420, 3389, 3452 |
| ZrmI | AGTACT | 1 cut(s) | 1294 |
| Zsp2I | ATGCAT | 2 cut(s) | 28, 698 |