Cullin-associated NEDD8-dissociated protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G02560 AT2G02560 |
| fragaria_vesca | FvH4_7g33400 FvH4_7g33400 |
| malus_domestica | MD01G1232300.v1.1 MD07G1304100.v1.1 |
| prunus_persica | Prupe.2G322700_v2.0.a1 Prupe.2G322700_v2.0.a1 Prupe.2G322700_v2.0.a1 |
| pyrus_communis | pycom01g24070 pycom07g27710 |
| rosa_chinensis | RchiOBHm_Chr1g0383371 |
| rosa_laevigata | RLG00000026107 |
| rosa_multiflora | Rmu_co8130632.1_g000001 Rmu_sc0007173.1_g000011 Rmu_sc0019557.1_g000001 Rmu_sc0020036.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00277350 |
| rosa_rugosa | Rorug01G0441000 |
| rosa_samantha | Rh1AG466900 Rh1BG424200 Rh1CG437300 Rh1DG456900 |
| rosa_wichuraiana | Rw1G040570 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 360 |
| AccB1I | GGYRCC | 1 cut(s) | 849 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2156 |
| AccI | GTMKAC | 2 cut(s) | 25, 3492 |
| AccIII | TCCGGA | 1 cut(s) | 2764 |
| AclI | AACGTT | 1 cut(s) | 2198 |
| AclWI | GGATC | 5 cut(s) | 404, 1392, 3048, 3428, 3441 |
| AcoI | YGGCCR | 3 cut(s) | 195, 1964, 2385 |
| AcsI | RAATTY | 5 cut(s) | 339, 882, 2448, 2473, 3597 |
| AcuI | CTGAAG | 3 cut(s) | 651, 1277, 2741 |
| AfaI | GTAC | 4 cut(s) | 682, 3085, 3408, 3629 |
| AfeI | AGCGCT | 2 cut(s) | 3520, 3615 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 555, 2110, 2156, 2339, 3617 |
| AflII | CTTAAG | 3 cut(s) | 1948, 2900, 3572 |
| AgeI | ACCGGT | 1 cut(s) | 20 |
| AjnI | CCWGG | 5 cut(s) | 412, 854, 1377, 1405, 2109 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2902, 2934 |
| Alw21I | GWGCWC | 1 cut(s) | 520 |
| Alw26I | GTCTC | 5 cut(s) | 212, 357, 531, 2510, 2858 |
| AlwI | GGATC | 5 cut(s) | 404, 1392, 3048, 3428, 3441 |
| Ama87I | CYCGRG | 1 cut(s) | 2507 |
| Aor13HI | TCCGGA | 1 cut(s) | 2764 |
| Aor51HI | AGCGCT | 2 cut(s) | 3520, 3615 |
| AoxI | GGCC | 7 cut(s) | 195, 546, 1964, 2100, 2385, 2978, 3196 |
| ApoI | RAATTY | 5 cut(s) | 339, 882, 2448, 2473, 3597 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2902, 2934 |
| AseI | ATTAAT | 2 cut(s) | 768, 1121 |
| AsiGI | ACCGGT | 1 cut(s) | 20 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 885 |
| AspLEI | GCGC | 4 cut(s) | 361, 1334, 3521, 3616 |
| AspS9I | GGNCC | 5 cut(s) | 734, 1989, 2101, 2671, 3197 |
| AsuHPI | GGTGA | 4 cut(s) | 191, 1787, 2420, 3632 |
| AsuII | TTCGAA | 2 cut(s) | 1033, 2589 |
| AvaI | CYCGRG | 1 cut(s) | 2507 |
| AvaII | GGWCC | 3 cut(s) | 734, 1989, 2671 |
| BaeGI | GKGCMC | 1 cut(s) | 854 |
| BamHI | GGATCC | 1 cut(s) | 3433 |
| BanI | GGYRCC | 1 cut(s) | 849 |
| BauI | CACGAG | 1 cut(s) | 240 |
| BbsI | GAAGAC | 3 cut(s) | 329, 1799, 3510 |
| Bbv12I | GWGCWC | 1 cut(s) | 520 |
| BbvCI | CCTCAGC | 1 cut(s) | 1584 |
| BccI | CCATC | 9 cut(s) | 747, 977, 1153, 1242, 1521, 2125, 3215, 3372, 3406 |
| BceAI | ACGGC | 4 cut(s) | 182, 2032, 2115, 2372 |
| BciT130I | CCWGG | 5 cut(s) | 414, 856, 1379, 1407, 2111 |
| BclI | TGATCA | 5 cut(s) | 3111, 3151, 3177, 3283, 3337 |
| BcoDI | GTCTC | 5 cut(s) | 212, 357, 531, 2510, 2858 |
| BfaI | CTAG | 5 cut(s) | 1536, 1757, 2145, 2300, 2534 |
| BfmI | CTRYAG | 4 cut(s) | 2034, 2219, 2745, 3402 |
| BfoI | RGCGCY | 3 cut(s) | 1335, 3522, 3617 |
| BfrI | CTTAAG | 3 cut(s) | 1948, 2900, 3572 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 2237 |
| BglII | AGATCT | 4 cut(s) | 1283, 1900, 2530, 3323 |
| BlpI | GCTNAGC | 2 cut(s) | 2322, 2481 |
| BmcAI | AGTACT | 1 cut(s) | 3408 |
| Bme1390I | CCNGG | 5 cut(s) | 414, 856, 1379, 1407, 2111 |
| Bme18I | GGWCC | 3 cut(s) | 734, 1989, 2671 |
| BmeT110I | CYCGRG | 1 cut(s) | 2507 |
| BmgT120I | GGNCC | 5 cut(s) | 734, 1989, 2101, 2671, 3197 |
| BmiI | GGNNCC | 5 cut(s) | 736, 851, 1990, 2539, 3435 |
| BmrFI | CCNGG | 5 cut(s) | 414, 856, 1379, 1407, 2111 |
| BmrI | ACTGGG | 2 cut(s) | 752, 2144 |
| BmuI | ACTGGG | 2 cut(s) | 752, 2144 |
| BoxI | GACNNNNGTC | 1 cut(s) | 3393 |
| BpiI | GAAGAC | 3 cut(s) | 329, 1799, 3510 |
| BpmI | CTGGAG | 2 cut(s) | 50, 3594 |
| Bpu10I | CCTNAGC | 2 cut(s) | 845, 1584 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 2322, 2481 |
| Bpu14I | TTCGAA | 2 cut(s) | 1033, 2589 |
| BpuEI | CTTGAG | 3 cut(s) | 149, 2633, 3248 |
| BsaAI | YACGTR | 1 cut(s) | 1304 |
| BsaBI | GATNNNNATC | 2 cut(s) | 123, 1716 |
| BsaJI | CCNNGG | 4 cut(s) | 854, 855, 2109, 2262 |
| BsaWI | WCCGGW | 2 cut(s) | 20, 2764 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 555, 2110, 2156, 2339, 3617 |
| Bse118I | RCCGGY | 2 cut(s) | 20, 3048 |
| Bse1I | ACTGG | 8 cut(s) | 33, 46, 758, 1204, 2150, 2772, 2916, 3414 |
| Bse3DI | GCAATG | 8 cut(s) | 21, 576, 2213, 2240, 2423, 2949, 3263, 3505 |
| Bse8I | GATNNNNATC | 2 cut(s) | 123, 1716 |
| BseAI | TCCGGA | 1 cut(s) | 2764 |
| BseBI | CCWGG | 5 cut(s) | 414, 856, 1379, 1407, 2111 |
| BseDI | CCNNGG | 4 cut(s) | 854, 855, 2109, 2262 |
| BseGI | GGATG | 3 cut(s) | 1513, 1669, 3340 |
| BseJI | GATNNNNATC | 2 cut(s) | 123, 1716 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 555, 2110, 2156, 2339, 3617 |
| BseMI | GCAATG | 8 cut(s) | 21, 576, 2213, 2240, 2423, 2949, 3263, 3505 |
| BseMII | CTCAG | 7 cut(s) | 362, 542, 1071, 1575, 2348, 2838, 3515 |
| BseNI | ACTGG | 8 cut(s) | 33, 46, 758, 1204, 2150, 2772, 2916, 3414 |
| BseRI | GAGGAG | 4 cut(s) | 815, 983, 986, 2322 |
| BseSI | GKGCMC | 1 cut(s) | 854 |
| BsgI | GTGCAG | 3 cut(s) | 760, 2107, 2880 |
| BshFI | GGCC | 7 cut(s) | 197, 548, 1966, 2102, 2387, 2980, 3198 |
| BshNI | GGYRCC | 1 cut(s) | 849 |
| BshTI | ACCGGT | 1 cut(s) | 20 |
| BsiHKAI | GWGCWC | 1 cut(s) | 520 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2507 |
| BsiSI | CCGG | 4 cut(s) | 21, 2765, 2981, 3049 |
| BslFI | GGGAC | 3 cut(s) | 740, 872, 2002 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 555, 2110, 2156, 2339, 3617 |
| BsmAI | GTCTC | 5 cut(s) | 212, 357, 531, 2510, 2858 |
| BsmFI | GGGAC | 3 cut(s) | 740, 872, 2002 |
| BsmI | GAATGC | 2 cut(s) | 1943, 3257 |
| BsnI | GGCC | 7 cut(s) | 197, 548, 1966, 2102, 2387, 2980, 3198 |
| BsoBI | CYCGRG | 1 cut(s) | 2507 |
| Bsp119I | TTCGAA | 2 cut(s) | 1033, 2589 |
| Bsp1286I | GDGCHC | 2 cut(s) | 520, 854 |
| Bsp13I | TCCGGA | 1 cut(s) | 2764 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 2322, 2481 |
| BspANI | GGCC | 7 cut(s) | 197, 548, 1966, 2102, 2387, 2980, 3198 |
| BspCNI | CTCAG | 7 cut(s) | 361, 541, 1072, 1576, 2347, 2839, 3516 |
| BspEI | TCCGGA | 1 cut(s) | 2764 |
| BspHI | TCATGA | 2 cut(s) | 964, 3043 |
| BspLI | GGNNCC | 5 cut(s) | 736, 851, 1990, 2539, 3435 |
| BspMAI | CTGCAG | 3 cut(s) | 2038, 2223, 3406 |
| BspPI | GGATC | 5 cut(s) | 404, 1392, 3048, 3428, 3441 |
| BspQI | GCTCTTC | 1 cut(s) | 1030 |
| BspT104I | TTCGAA | 2 cut(s) | 1033, 2589 |
| BspT107I | GGYRCC | 1 cut(s) | 849 |
| BspTI | CTTAAG | 3 cut(s) | 1948, 2900, 3572 |
| BsrDI | GCAATG | 8 cut(s) | 21, 576, 2213, 2240, 2423, 2949, 3263, 3505 |
| BsrFI | RCCGGY | 2 cut(s) | 20, 3048 |
| BsrI | ACTGG | 8 cut(s) | 33, 46, 758, 1204, 2150, 2772, 2916, 3414 |
| BssAI | RCCGGY | 2 cut(s) | 20, 3048 |
| BssECI | CCNNGG | 4 cut(s) | 854, 855, 2109, 2262 |
| BssNAI | GTATAC | 1 cut(s) | 26 |
| BssSI | CACGAG | 1 cut(s) | 240 |
| BssT1I | CCWWGG | 1 cut(s) | 2262 |
| Bst1107I | GTATAC | 1 cut(s) | 26 |
| Bst2BI | CACGAG | 1 cut(s) | 240 |
| Bst2UI | CCWGG | 5 cut(s) | 414, 856, 1379, 1407, 2111 |
| Bst6I | CTCTTC | 4 cut(s) | 1030, 2313, 2586, 2817 |
| BstAFI | CTTAAG | 3 cut(s) | 1948, 2900, 3572 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 587, 1267 |
| BstBAI | YACGTR | 1 cut(s) | 1304 |
| BstBI | TTCGAA | 2 cut(s) | 1033, 2589 |
| BstEII | GGTNACC | 2 cut(s) | 2408, 2639 |
| BstF5I | GGATG | 3 cut(s) | 1513, 1669, 3340 |
| BstH2I | RGCGCY | 3 cut(s) | 1335, 3522, 3617 |
| BstHHI | GCGC | 4 cut(s) | 361, 1334, 3521, 3616 |
| BstMAI | GTCTC | 5 cut(s) | 212, 357, 531, 2510, 2858 |
| BstNI | CCWGG | 5 cut(s) | 414, 856, 1379, 1407, 2111 |
| BstNSI | RCATGY | 1 cut(s) | 3056 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 3393 |
| BstPI | GGTNACC | 2 cut(s) | 2408, 2639 |
| BstSCI | CCNGG | 5 cut(s) | 412, 854, 1377, 1405, 2109 |
| BstSFI | CTRYAG | 4 cut(s) | 2034, 2219, 2745, 3402 |
| BstSLI | GKGCMC | 1 cut(s) | 854 |
| BstV2I | GAAGAC | 3 cut(s) | 329, 1799, 3510 |
| BstX2I | RGATCY | 5 cut(s) | 1283, 1900, 2530, 3323, 3433 |
| BstYI | RGATCY | 5 cut(s) | 1283, 1900, 2530, 3323, 3433 |
| BstZ17I | GTATAC | 1 cut(s) | 26 |
| BsuRI | GGCC | 7 cut(s) | 197, 548, 1966, 2102, 2387, 2980, 3198 |
| BtsCI | GGATG | 3 cut(s) | 1513, 1669, 3340 |
| BtsI | GCAGTG | 2 cut(s) | 1863, 3420 |
| CciI | TCATGA | 2 cut(s) | 964, 3043 |
| CfoI | GCGC | 4 cut(s) | 361, 1334, 3521, 3616 |
| Cfr10I | RCCGGY | 2 cut(s) | 20, 3048 |
| Cfr13I | GGNCC | 5 cut(s) | 734, 1989, 2101, 2671, 3197 |
| CseI | GACGC | 1 cut(s) | 3525 |
| Csp6I | GTAC | 4 cut(s) | 681, 3084, 3407, 3628 |
| CspAI | ACCGGT | 1 cut(s) | 20 |
| CviQI | GTAC | 4 cut(s) | 681, 3084, 3407, 3628 |
| DraI | TTTAAA | 3 cut(s) | 112, 1135, 3603 |
| EaeI | YGGCCR | 3 cut(s) | 195, 1964, 2385 |
| Eam1104I | CTCTTC | 4 cut(s) | 1030, 2313, 2586, 2817 |
| EarI | CTCTTC | 4 cut(s) | 1030, 2313, 2586, 2817 |
| EciI | GGCGGA | 4 cut(s) | 1397, 2150, 2539, 3573 |
| Eco130I | CCWWGG | 1 cut(s) | 2262 |
| Eco32I | GATATC | 1 cut(s) | 725 |
| Eco47I | GGWCC | 3 cut(s) | 734, 1989, 2671 |
| Eco47III | AGCGCT | 2 cut(s) | 3520, 3615 |
| Eco57I | CTGAAG | 3 cut(s) | 651, 1277, 2741 |
| Eco88I | CYCGRG | 1 cut(s) | 2507 |
| Eco91I | GGTNACC | 2 cut(s) | 2408, 2639 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1989 |
| EcoO65I | GGTNACC | 2 cut(s) | 2408, 2639 |
| EcoRII | CCWGG | 5 cut(s) | 412, 854, 1377, 1405, 2109 |
| EcoRV | GATATC | 1 cut(s) | 725 |
| EcoT14I | CCWWGG | 1 cut(s) | 2262 |
| EcoT22I | ATGCAT | 1 cut(s) | 578 |
| ErhI | CCWWGG | 1 cut(s) | 2262 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 301, 333 |
| FaqI | GGGAC | 3 cut(s) | 740, 872, 2002 |
| FauI | CCCGC | 1 cut(s) | 2887 |
| FbaI | TGATCA | 5 cut(s) | 3111, 3151, 3177, 3283, 3337 |
| FblI | GTMKAC | 2 cut(s) | 25, 3492 |
| FokI | GGATG | 3 cut(s) | 1500, 1656, 3347 |
| FspBI | CTAG | 5 cut(s) | 1536, 1757, 2145, 2300, 2534 |
| FspI | TGCGCA | 1 cut(s) | 360 |
| GlaI | GCGC | 4 cut(s) | 360, 1333, 3520, 3615 |
| GsuI | CTGGAG | 2 cut(s) | 50, 3594 |
| HaeII | RGCGCY | 3 cut(s) | 1335, 3522, 3617 |
| HaeIII | GGCC | 7 cut(s) | 197, 548, 1966, 2102, 2387, 2980, 3198 |
| HapII | CCGG | 4 cut(s) | 21, 2765, 2981, 3049 |
| HgaI | GACGC | 1 cut(s) | 3525 |
| HhaI | GCGC | 4 cut(s) | 361, 1334, 3521, 3616 |
| Hin6I | GCGC | 4 cut(s) | 359, 1332, 3519, 3614 |
| HinP1I | GCGC | 4 cut(s) | 359, 1332, 3519, 3614 |
| HincII | GTYRAC | 2 cut(s) | 141, 1767 |
| HindII | GTYRAC | 2 cut(s) | 141, 1767 |
| HindIII | AAGCTT | 3 cut(s) | 263, 2358, 3380 |
| HinfI | GANTC | 9 cut(s) | 119, 676, 1240, 2081, 2303, 2570, 2768, 3422, 3511 |
| HpaII | CCGG | 4 cut(s) | 21, 2765, 2981, 3049 |
| HphI | GGTGA | 4 cut(s) | 191, 1787, 2420, 3632 |
| Hpy166II | GTNNAC | 6 cut(s) | 26, 141, 1767, 3259, 3292, 3493 |
| Hpy8I | GTNNAC | 6 cut(s) | 26, 141, 1767, 3259, 3292, 3493 |
| HpyAV | CCTTC | 6 cut(s) | 220, 1512, 1855, 2716, 3232, 3306 |
| HpyCH4IV | ACGT | 6 cut(s) | 462, 1164, 1303, 2198, 2838, 3630 |
| HpySE526I | ACGT | 6 cut(s) | 462, 1164, 1303, 2198, 2838, 3630 |
| HspAI | GCGC | 4 cut(s) | 359, 1332, 3519, 3614 |
| Kpn2I | TCCGGA | 1 cut(s) | 2764 |
| Ksp22I | TGATCA | 5 cut(s) | 3111, 3151, 3177, 3283, 3337 |
| LguI | GCTCTTC | 1 cut(s) | 1030 |
| LmnI | GCTCC | 5 cut(s) | 292, 802, 1561, 1918, 2543 |
| MaeI | CTAG | 5 cut(s) | 1536, 1757, 2145, 2300, 2534 |
| MaeII | ACGT | 6 cut(s) | 462, 1164, 1303, 2198, 2838, 3630 |
| MaeIII | GTNAC | 7 cut(s) | 458, 1207, 1576, 1692, 2408, 2639, 3620 |
| MflI | RGATCY | 5 cut(s) | 1283, 1900, 2530, 3323, 3433 |
| MhlI | GDGCHC | 2 cut(s) | 520, 854 |
| MlyI | GAGTC | 5 cut(s) | 670, 1249, 2297, 2579, 3416 |
| MmeI | TCCRAC | 2 cut(s) | 700, 1896 |
| Mph1103I | ATGCAT | 1 cut(s) | 578 |
| MroI | TCCGGA | 1 cut(s) | 2764 |
| MroXI | GAANNNNTTC | 1 cut(s) | 885 |
| MslI | CAYNNNNRTG | 3 cut(s) | 2129, 3250, 3345 |
| MspA1I | CMGCKG | 4 cut(s) | 629, 1023, 1583, 2924 |
| MspCI | CTTAAG | 3 cut(s) | 1948, 2900, 3572 |
| MspI | CCGG | 4 cut(s) | 21, 2765, 2981, 3049 |
| MspR9I | CCNGG | 5 cut(s) | 414, 856, 1379, 1407, 2111 |
| Mva1269I | GAATGC | 2 cut(s) | 1943, 3257 |
| MvaI | CCWGG | 5 cut(s) | 414, 856, 1379, 1407, 2111 |
| NlaIV | GGNNCC | 5 cut(s) | 736, 851, 1990, 2539, 3435 |
| NmeAIII | GCCGAG | 1 cut(s) | 3174 |
| NmuCI | GTSAC | 5 cut(s) | 458, 1576, 1692, 2408, 3620 |
| NsbI | TGCGCA | 1 cut(s) | 360 |
| NsiI | ATGCAT | 1 cut(s) | 578 |
| NspI | RCATGY | 1 cut(s) | 3056 |
| NspV | TTCGAA | 2 cut(s) | 1033, 2589 |
| PacI | TTAATTAA | 1 cut(s) | 768 |
| PagI | TCATGA | 2 cut(s) | 964, 3043 |
| PasI | CCCWGGG | 1 cut(s) | 855 |
| PciSI | GCTCTTC | 1 cut(s) | 1030 |
| PctI | GAATGC | 2 cut(s) | 1943, 3257 |
| PdmI | GAANNNNTTC | 1 cut(s) | 885 |
| PfeI | GAWTC | 4 cut(s) | 119, 2081, 2768, 3511 |
| PflFI | GACNNNGTC | 1 cut(s) | 752 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2156 |
| PfoI | TCCNGGA | 2 cut(s) | 412, 1405 |
| PinAI | ACCGGT | 1 cut(s) | 20 |
| PleI | GAGTC | 5 cut(s) | 670, 1248, 2297, 2578, 3416 |
| PpsI | GAGTC | 5 cut(s) | 670, 1248, 2297, 2578, 3416 |
| Ppu21I | YACGTR | 1 cut(s) | 1304 |
| PpuMI | RGGWCCY | 1 cut(s) | 1989 |
| PshAI | GACNNNNGTC | 1 cut(s) | 3393 |
| PshBI | ATTAAT | 2 cut(s) | 768, 1121 |
| Psp1406I | AACGTT | 1 cut(s) | 2198 |
| Psp5II | RGGWCCY | 1 cut(s) | 1989 |
| Psp6I | CCWGG | 5 cut(s) | 412, 854, 1377, 1405, 2109 |
| PspEI | GGTNACC | 2 cut(s) | 2408, 2639 |
| PspGI | CCWGG | 5 cut(s) | 412, 854, 1377, 1405, 2109 |
| PspN4I | GGNNCC | 5 cut(s) | 736, 851, 1990, 2539, 3435 |
| PspPI | GGNCC | 5 cut(s) | 734, 1989, 2101, 2671, 3197 |
| PspPPI | RGGWCCY | 1 cut(s) | 1989 |
| PstI | CTGCAG | 3 cut(s) | 2038, 2223, 3406 |
| PsuI | RGATCY | 5 cut(s) | 1283, 1900, 2530, 3323, 3433 |
| PsyI | GACNNNGTC | 1 cut(s) | 752 |
| PvuII | CAGCTG | 3 cut(s) | 1023, 1583, 2924 |
| RsaI | GTAC | 4 cut(s) | 682, 3085, 3408, 3629 |
| RsaNI | GTAC | 4 cut(s) | 681, 3084, 3407, 3628 |
| RseI | CAYNNNNRTG | 3 cut(s) | 2129, 3250, 3345 |
| SapI | GCTCTTC | 1 cut(s) | 1030 |
| Sau96I | GGNCC | 5 cut(s) | 734, 1989, 2101, 2671, 3197 |
| ScaI | AGTACT | 1 cut(s) | 3408 |
| SchI | GAGTC | 5 cut(s) | 670, 1249, 2297, 2579, 3416 |
| ScrFI | CCNGG | 5 cut(s) | 414, 856, 1379, 1407, 2111 |
| SduI | GDGCHC | 2 cut(s) | 520, 854 |
| SfcI | CTRYAG | 4 cut(s) | 2034, 2219, 2745, 3402 |
| SfuI | TTCGAA | 2 cut(s) | 1033, 2589 |
| SinI | GGWCC | 3 cut(s) | 734, 1989, 2671 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 2129, 3250, 3345 |
| SmlI | CTYRAG | 6 cut(s) | 128, 1948, 2648, 2900, 3227, 3572 |
| SmoI | CTYRAG | 6 cut(s) | 128, 1948, 2648, 2900, 3227, 3572 |
| SspI | AATATT | 5 cut(s) | 688, 1633, 2560, 2629, 2963 |
| SspMI | CTAG | 5 cut(s) | 1536, 1757, 2145, 2300, 2534 |
| StyD4I | CCNGG | 5 cut(s) | 412, 854, 1377, 1405, 2109 |
| StyI | CCWWGG | 1 cut(s) | 2262 |
| TaiI | ACGT | 6 cut(s) | 465, 1167, 1306, 2201, 2841, 3633 |
| TaqI | TCGA | 7 cut(s) | 593, 1033, 1825, 1846, 2589, 2874, 2966 |
| TatI | WGTACW | 2 cut(s) | 3083, 3406 |
| TauI | GCSGC | 3 cut(s) | 2609, 3068, 3142 |
| TfiI | GAWTC | 4 cut(s) | 119, 2081, 2768, 3511 |
| TseFI | GTSAC | 5 cut(s) | 458, 1576, 1692, 2408, 3620 |
| Tsp45I | GTSAC | 5 cut(s) | 458, 1576, 1692, 2408, 3620 |
| TspGWI | ACGGA | 2 cut(s) | 1330, 1604 |
| Tth111I | GACNNNGTC | 1 cut(s) | 752 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2156 |
| Vha464I | CTTAAG | 3 cut(s) | 1948, 2900, 3572 |
| VpaK11BI | GGWCC | 3 cut(s) | 734, 1989, 2671 |
| VspI | ATTAAT | 2 cut(s) | 768, 1121 |
| XapI | RAATTY | 5 cut(s) | 339, 882, 2448, 2473, 3597 |
| XceI | RCATGY | 1 cut(s) | 3056 |
| XmiI | GTMKAC | 2 cut(s) | 25, 3492 |
| XmnI | GAANNNNTTC | 1 cut(s) | 885 |
| XspI | CTAG | 5 cut(s) | 1536, 1757, 2145, 2300, 2534 |
| ZrmI | AGTACT | 1 cut(s) | 3408 |
| Zsp2I | ATGCAT | 1 cut(s) | 578 |