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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G13590 AT5G13590 AT5G13590 AT5G13590 AT5G13590 AT5G13590 |
| fragaria_vesca | FvH4_7g20760 |
| malus_domestica | MD01G1117200.v1.1 MD07G1184600.v1.1 |
| prunus_persica | Prupe.2G224500_v2.0.a1 |
| pyrus_communis | pycom01g14480 pycom07g17670 |
| rosa_chinensis | RchiOBHm_Chr1g0365001 |
| rosa_laevigata | RLG00000027451 |
| rosa_multiflora | Rmu_sc0000418.1_g000009 Rmu_ssc0000112.1_g000020 |
| rosa_roxburghii | Rroxscaffold_1G00022860 Rroxscaffold_2G00110440 Rroxscaffold_4G00291580 Rroxscaffold_4G00292010 |
| rosa_rugosa | Rorug01G0318800 Rorug02G0315200 |
| rosa_samantha | Rh1AG327800 Rh1BG289100 Rh1CG305800 Rh1DG320600 |
| rosa_wichuraiana | Rw1G029060 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 1995, 2649, 3543 |
| AasI | GACNNNNNNGTC | 2 cut(s) | 1085, 1796 |
| AccB1I | GGYRCC | 2 cut(s) | 1313, 2263 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 3419 |
| AccI | GTMKAC | 2 cut(s) | 107, 2812 |
| AciI | CCGC | 3 cut(s) | 1823, 2827, 3738 |
| AclI | AACGTT | 1 cut(s) | 1470 |
| AclWI | GGATC | 8 cut(s) | 1277, 1290, 3144, 3222, 3296, 3309, 3392, 3405 |
| AcoI | YGGCCR | 1 cut(s) | 3683 |
| AcsI | RAATTY | 4 cut(s) | 646, 1033, 2281, 2917 |
| AcuI | CTGAAG | 2 cut(s) | 45, 1374 |
| AfaI | GTAC | 6 cut(s) | 87, 403, 475, 884, 1008, 2761 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 559, 2570, 2823, 3419, 3545 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1241 |
| AjiI | CACGTC | 2 cut(s) | 2582, 3515 |
| AjnI | CCWGG | 6 cut(s) | 2007, 2259, 3107, 3121, 3304, 3685 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2159, 2191 |
| Alw21I | GWGCWC | 4 cut(s) | 1232, 1732, 2042, 2847 |
| Alw26I | GTCTC | 5 cut(s) | 2835, 3201, 3306, 3505, 3554 |
| Alw44I | GTGCAC | 1 cut(s) | 2843 |
| AlwI | GGATC | 8 cut(s) | 1277, 1290, 3144, 3222, 3296, 3309, 3392, 3405 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 722, 2126 |
| Ama87I | CYCGRG | 6 cut(s) | 99, 216, 274, 2484, 2518, 3402 |
| ApaLI | GTGCAC | 1 cut(s) | 2843 |
| ApeKI | GCWGC | 3 cut(s) | 615, 2239, 2315 |
| ApoI | RAATTY | 4 cut(s) | 646, 1033, 2281, 2917 |
| AseI | ATTAAT | 2 cut(s) | 78, 1671 |
| AspA2I | CCTAGG | 1 cut(s) | 3590 |
| AspLEI | GCGC | 2 cut(s) | 912, 1486 |
| AsuC2I | CCSGG | 4 cut(s) | 2182, 2519, 2520, 3252 |
| AvaI | CYCGRG | 6 cut(s) | 99, 216, 274, 2484, 2518, 3402 |
| AvaII | GGWCC | 6 cut(s) | 1532, 1798, 1907, 2795, 3105, 3518 |
| AvrII | CCTAGG | 1 cut(s) | 3590 |
| BaeGI | GKGCMC | 1 cut(s) | 2847 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 990, 1023 |
| BamHI | GGATCC | 3 cut(s) | 1282, 3301, 3397 |
| BanI | GGYRCC | 2 cut(s) | 1313, 2263 |
| BanII | GRGCYC | 1 cut(s) | 858 |
| BarI | GAAGNNNNNNTAC | 6 cut(s) | 2460, 2492, 2620, 2652, 2986, 3018 |
| BauI | CACGAG | 1 cut(s) | 89 |
| BbsI | GAAGAC | 4 cut(s) | 1209, 1794, 3126, 3726 |
| Bbv12I | GWGCWC | 4 cut(s) | 1232, 1732, 2042, 2847 |
| BbvI | GCAGC | 3 cut(s) | 627, 2226, 2302 |
| BceAI | ACGGC | 4 cut(s) | 1389, 2407, 3334, 3438 |
| BciT130I | CCWGG | 6 cut(s) | 2009, 2261, 3109, 3123, 3306, 3687 |
| BciVI | GTATCC | 2 cut(s) | 1747, 2317 |
| BclI | TGATCA | 2 cut(s) | 1612, 2131 |
| BcnI | CCSGG | 4 cut(s) | 2182, 2519, 2520, 3252 |
| BcoDI | GTCTC | 5 cut(s) | 2835, 3201, 3306, 3505, 3554 |
| BfmI | CTRYAG | 1 cut(s) | 2211 |
| BfuI | GTATCC | 2 cut(s) | 1747, 2317 |
| BisI | GCNGC | 3 cut(s) | 616, 2240, 2316 |
| BlnI | CCTAGG | 1 cut(s) | 3590 |
| BlsI | GCNGC | 3 cut(s) | 617, 2241, 2317 |
| BmcAI | AGTACT | 1 cut(s) | 475 |
| Bme18I | GGWCC | 6 cut(s) | 1532, 1798, 1907, 2795, 3105, 3518 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1241 |
| BmeT110I | CYCGRG | 6 cut(s) | 99, 216, 274, 2484, 2518, 3402 |
| BmgBI | CACGTC | 2 cut(s) | 2582, 3515 |
| BmrI | ACTGGG | 3 cut(s) | 694, 795, 1131 |
| BmsI | GCATC | 9 cut(s) | 139, 398, 697, 1237, 2140, 2158, 2586, 2695, 2899 |
| BmuI | ACTGGG | 3 cut(s) | 694, 795, 1131 |
| BpiI | GAAGAC | 4 cut(s) | 1209, 1794, 3126, 3726 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2815, 2847 |
| BpmI | CTGGAG | 2 cut(s) | 495, 2724 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2319 |
| BpuEI | CTTGAG | 2 cut(s) | 1272, 2803 |
| BpuMI | CCSGG | 4 cut(s) | 2182, 2519, 2520, 3252 |
| BsaAI | YACGTR | 2 cut(s) | 2037, 2245 |
| BsaI | GGTCTC | 3 cut(s) | 2835, 3201, 3306 |
| BsaJI | CCNNGG | 9 cut(s) | 652, 1749, 2518, 3122, 3128, 3316, 3326, 3590, 3755 |
| BsaWI | WCCGGW | 2 cut(s) | 552, 2297 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 559, 2570, 2823, 3419, 3545 |
| Bse3DI | GCAATG | 1 cut(s) | 1376 |
| BseBI | CCWGG | 6 cut(s) | 2009, 2261, 3109, 3123, 3306, 3687 |
| BseDI | CCNNGG | 9 cut(s) | 652, 1749, 2518, 3122, 3128, 3316, 3326, 3590, 3755 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 559, 2570, 2823, 3419, 3545 |
| BseMI | GCAATG | 1 cut(s) | 1376 |
| BseMII | CTCAG | 7 cut(s) | 327, 459, 851, 1332, 1541, 2546, 3498 |
| BseRI | GAGGAG | 2 cut(s) | 9, 3079 |
| BseSI | GKGCMC | 1 cut(s) | 2847 |
| BseXI | GCAGC | 3 cut(s) | 627, 2226, 2302 |
| BsgI | GTGCAG | 2 cut(s) | 2225, 2994 |
| BshNI | GGYRCC | 2 cut(s) | 1313, 2263 |
| BsiHKAI | GWGCWC | 4 cut(s) | 1232, 1732, 2042, 2847 |
| BsiHKCI | CYCGRG | 6 cut(s) | 99, 216, 274, 2484, 2518, 3402 |
| BsiSI | CCGG | 6 cut(s) | 553, 2181, 2298, 2519, 3252, 3361 |
| BslFI | GGGAC | 3 cut(s) | 1920, 2657, 3671 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 559, 2570, 2823, 3419, 3545 |
| BsmAI | GTCTC | 5 cut(s) | 2835, 3201, 3306, 3505, 3554 |
| BsmBI | CGTCTC | 1 cut(s) | 3505 |
| BsmFI | GGGAC | 3 cut(s) | 1920, 2657, 3671 |
| BsmI | GAATGC | 2 cut(s) | 1459, 3445 |
| Bso31I | GGTCTC | 3 cut(s) | 2835, 3201, 3306 |
| BsoBI | CYCGRG | 6 cut(s) | 99, 216, 274, 2484, 2518, 3402 |
| Bsp1286I | GDGCHC | 5 cut(s) | 858, 1232, 1732, 2042, 2847 |
| Bsp19I | CCATGG | 2 cut(s) | 1749, 3128 |
| BspACI | CCGC | 3 cut(s) | 1823, 2827, 3738 |
| BspCNI | CTCAG | 7 cut(s) | 328, 460, 850, 1331, 1540, 2547, 3499 |
| BspPI | GGATC | 8 cut(s) | 1277, 1290, 3144, 3222, 3296, 3309, 3392, 3405 |
| BspT107I | GGYRCC | 2 cut(s) | 1313, 2263 |
| BspTNI | GGTCTC | 3 cut(s) | 2835, 3201, 3306 |
| BsrDI | GCAATG | 1 cut(s) | 1376 |
| BssECI | CCNNGG | 9 cut(s) | 652, 1749, 2518, 3122, 3128, 3316, 3326, 3590, 3755 |
| BssNAI | GTATAC | 1 cut(s) | 2813 |
| BssSI | CACGAG | 1 cut(s) | 89 |
| BssT1I | CCWWGG | 6 cut(s) | 652, 1749, 3128, 3326, 3590, 3755 |
| Bst1107I | GTATAC | 1 cut(s) | 2813 |
| Bst2BI | CACGAG | 1 cut(s) | 89 |
| Bst2UI | CCWGG | 6 cut(s) | 2009, 2261, 3109, 3123, 3306, 3687 |
| Bst4CI | ACNGT | 9 cut(s) | 629, 724, 822, 1060, 1793, 2212, 2380, 2810, 2903 |
| Bst6I | CTCTTC | 4 cut(s) | 2431, 2463, 3304, 3788 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 621 |
| BstBAI | YACGTR | 2 cut(s) | 2037, 2245 |
| BstC8I | GCNNGC | 2 cut(s) | 459, 929 |
| BstDSI | CCRYGG | 3 cut(s) | 1749, 3128, 3316 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 2568, 2821 |
| BstHHI | GCGC | 2 cut(s) | 912, 1486 |
| BstMAI | GTCTC | 5 cut(s) | 2835, 3201, 3306, 3505, 3554 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 621, 677 |
| BstNI | CCWGG | 6 cut(s) | 2009, 2261, 3109, 3123, 3306, 3687 |
| BstNSI | RCATGY | 3 cut(s) | 295, 675, 2860 |
| BstSFI | CTRYAG | 1 cut(s) | 2211 |
| BstSLI | GKGCMC | 1 cut(s) | 2847 |
| BstV1I | GCAGC | 3 cut(s) | 627, 2226, 2302 |
| BstV2I | GAAGAC | 4 cut(s) | 1209, 1794, 3126, 3726 |
| BstX2I | RGATCY | 5 cut(s) | 1282, 3149, 3227, 3301, 3397 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 973 |
| BstYI | RGATCY | 5 cut(s) | 1282, 3149, 3227, 3301, 3397 |
| BstZ17I | GTATAC | 1 cut(s) | 2813 |
| BsuI | GTATCC | 2 cut(s) | 1747, 2317 |
| BtgI | CCRYGG | 3 cut(s) | 1749, 3128, 3316 |
| BtrI | CACGTC | 2 cut(s) | 2582, 3515 |
| BtsI | GCAGTG | 2 cut(s) | 1176, 2145 |
| BtsIMutI | CAGTG | 8 cut(s) | 581, 947, 1176, 1660, 1815, 2145, 2253, 2552 |
| Cac8I | GCNNGC | 2 cut(s) | 459, 929 |
| CaiI | CAGNNNCTG | 2 cut(s) | 722, 2126 |
| CfoI | GCGC | 2 cut(s) | 912, 1486 |
| Cfr9I | CCCGGG | 1 cut(s) | 2518 |
| Csp6I | GTAC | 6 cut(s) | 86, 402, 474, 883, 1007, 2760 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 1260, 1295, 1836, 1871 |
| CviQI | GTAC | 6 cut(s) | 86, 402, 474, 883, 1007, 2760 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 1085, 1796 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1241 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 1085, 1796 |
| EaeI | YGGCCR | 1 cut(s) | 3683 |
| Eam1104I | CTCTTC | 4 cut(s) | 2431, 2463, 3304, 3788 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1241 |
| EarI | CTCTTC | 4 cut(s) | 2431, 2463, 3304, 3788 |
| Eco130I | CCWWGG | 6 cut(s) | 652, 1749, 3128, 3326, 3590, 3755 |
| Eco147I | AGGCCT | 2 cut(s) | 7, 3595 |
| Eco24I | GRGCYC | 1 cut(s) | 858 |
| Eco31I | GGTCTC | 3 cut(s) | 2835, 3201, 3306 |
| Eco32I | GATATC | 2 cut(s) | 993, 2561 |
| Eco47I | GGWCC | 6 cut(s) | 1532, 1798, 1907, 2795, 3105, 3518 |
| Eco57I | CTGAAG | 2 cut(s) | 45, 1374 |
| Eco88I | CYCGRG | 6 cut(s) | 99, 216, 274, 2484, 2518, 3402 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 2568, 2821 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1532, 1907 |
| EcoRI | GAATTC | 1 cut(s) | 646 |
| EcoRII | CCWGG | 6 cut(s) | 2007, 2259, 3107, 3121, 3304, 3685 |
| EcoRV | GATATC | 2 cut(s) | 993, 2561 |
| EcoT14I | CCWWGG | 6 cut(s) | 652, 1749, 3128, 3326, 3590, 3755 |
| EcoT22I | ATGCAT | 3 cut(s) | 712, 2601, 3447 |
| EcoT38I | GRGCYC | 1 cut(s) | 858 |
| ErhI | CCWWGG | 6 cut(s) | 652, 1749, 3128, 3326, 3590, 3755 |
| Esp3I | CGTCTC | 1 cut(s) | 3505 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 299, 331, 1953, 1985 |
| FaqI | GGGAC | 3 cut(s) | 1920, 2657, 3671 |
| FauNDI | CATATG | 4 cut(s) | 118, 1480, 2503, 3007 |
| FbaI | TGATCA | 2 cut(s) | 1612, 2131 |
| FblI | GTMKAC | 2 cut(s) | 107, 2812 |
| Fnu4HI | GCNGC | 3 cut(s) | 616, 2240, 2316 |
| FriOI | GRGCYC | 1 cut(s) | 858 |
| Fsp4HI | GCNGC | 3 cut(s) | 616, 2240, 2316 |
| GlaI | GCGC | 2 cut(s) | 911, 1485 |
| GluI | GCNGC | 3 cut(s) | 616, 2240, 2316 |
| GsuI | CTGGAG | 2 cut(s) | 495, 2724 |
| HapII | CCGG | 6 cut(s) | 553, 2181, 2298, 2519, 3252, 3361 |
| HhaI | GCGC | 2 cut(s) | 912, 1486 |
| Hin6I | GCGC | 2 cut(s) | 910, 1484 |
| HinP1I | GCGC | 2 cut(s) | 910, 1484 |
| HincII | GTYRAC | 8 cut(s) | 108, 342, 808, 1123, 1434, 1579, 2118, 2509 |
| HindII | GTYRAC | 8 cut(s) | 108, 342, 808, 1123, 1434, 1579, 2118, 2509 |
| HindIII | AAGCTT | 3 cut(s) | 308, 1494, 2780 |
| HpaI | GTTAAC | 3 cut(s) | 808, 1123, 2509 |
| HpaII | CCGG | 6 cut(s) | 553, 2181, 2298, 2519, 3252, 3361 |
| HpyCH4III | ACNGT | 9 cut(s) | 629, 724, 822, 1060, 1793, 2212, 2380, 2810, 2903 |
| HpyCH4IV | ACGT | 9 cut(s) | 1005, 1125, 1470, 1774, 2036, 2244, 2581, 3514, 3782 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 621, 677 |
| HpySE526I | ACGT | 9 cut(s) | 1005, 1125, 1470, 1774, 2036, 2244, 2581, 3514, 3782 |
| HspAI | GCGC | 2 cut(s) | 910, 1484 |
| Ksp22I | TGATCA | 2 cut(s) | 1612, 2131 |
| KspAI | GTTAAC | 3 cut(s) | 808, 1123, 2509 |
| Lsp1109I | GCAGC | 3 cut(s) | 627, 2226, 2302 |
| LweI | GCATC | 9 cut(s) | 139, 398, 697, 1237, 2140, 2158, 2586, 2695, 2899 |
| MaeII | ACGT | 9 cut(s) | 1005, 1125, 1470, 1774, 2036, 2244, 2581, 3514, 3782 |
| MfeI | CAATTG | 2 cut(s) | 1305, 2611 |
| MflI | RGATCY | 5 cut(s) | 1282, 3149, 3227, 3301, 3397 |
| MhlI | GDGCHC | 5 cut(s) | 858, 1232, 1732, 2042, 2847 |
| MmeI | TCCRAC | 5 cut(s) | 775, 1390, 2413, 2818, 2905 |
| Mph1103I | ATGCAT | 3 cut(s) | 712, 2601, 3447 |
| MslI | CAYNNNNRTG | 4 cut(s) | 2604, 2685, 2855, 3765 |
| MspI | CCGG | 6 cut(s) | 553, 2181, 2298, 2519, 3252, 3361 |
| MunI | CAATTG | 2 cut(s) | 1305, 2611 |
| Mva1269I | GAATGC | 2 cut(s) | 1459, 3445 |
| MvaI | CCWGG | 6 cut(s) | 2009, 2261, 3109, 3123, 3306, 3687 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 621, 677 |
| NciI | CCSGG | 4 cut(s) | 2182, 2519, 2520, 3252 |
| NcoI | CCATGG | 2 cut(s) | 1749, 3128 |
| NdeI | CATATG | 4 cut(s) | 118, 1480, 2503, 3007 |
| NmuCI | GTSAC | 5 cut(s) | 579, 1367, 1617, 2273, 3783 |
| NsiI | ATGCAT | 3 cut(s) | 712, 2601, 3447 |
| NspI | RCATGY | 3 cut(s) | 295, 675, 2860 |
| PaeR7I | CTCGAG | 4 cut(s) | 216, 274, 2484, 3402 |
| PceI | AGGCCT | 2 cut(s) | 7, 3595 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 272 |
| PctI | GAATGC | 2 cut(s) | 1459, 3445 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 3419 |
| PfoI | TCCNGGA | 3 cut(s) | 3107, 3250, 3304 |
| PkrI | GCNGC | 3 cut(s) | 617, 2241, 2317 |
| Ppu21I | YACGTR | 2 cut(s) | 2037, 2245 |
| PpuMI | RGGWCCY | 2 cut(s) | 1532, 1907 |
| PshBI | ATTAAT | 2 cut(s) | 78, 1671 |
| PsiI | TTATAA | 3 cut(s) | 1995, 2649, 3543 |
| Psp1406I | AACGTT | 1 cut(s) | 1470 |
| Psp5II | RGGWCCY | 2 cut(s) | 1532, 1907 |
| Psp6I | CCWGG | 6 cut(s) | 2007, 2259, 3107, 3121, 3304, 3685 |
| PspGI | CCWGG | 6 cut(s) | 2007, 2259, 3107, 3121, 3304, 3685 |
| PspPPI | RGGWCCY | 2 cut(s) | 1532, 1907 |
| PspXI | VCTCGAGB | 2 cut(s) | 216, 274 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 118, 150 |
| PstNI | CAGNNNCTG | 2 cut(s) | 722, 2126 |
| PsuI | RGATCY | 5 cut(s) | 1282, 3149, 3227, 3301, 3397 |
| RsaI | GTAC | 6 cut(s) | 87, 403, 475, 884, 1008, 2761 |
| RsaNI | GTAC | 6 cut(s) | 86, 402, 474, 883, 1007, 2760 |
| RseI | CAYNNNNRTG | 4 cut(s) | 2604, 2685, 2855, 3765 |
| SalI | GTCGAC | 1 cut(s) | 106 |
| SatI | GCNGC | 3 cut(s) | 616, 2240, 2316 |
| ScaI | AGTACT | 1 cut(s) | 475 |
| SduI | GDGCHC | 5 cut(s) | 858, 1232, 1732, 2042, 2847 |
| SfaNI | GCATC | 9 cut(s) | 139, 398, 697, 1237, 2140, 2158, 2586, 2695, 2899 |
| SfcI | CTRYAG | 1 cut(s) | 2211 |
| Sfr274I | CTCGAG | 4 cut(s) | 216, 274, 2484, 3402 |
| SinI | GGWCC | 6 cut(s) | 1532, 1798, 1907, 2795, 3105, 3518 |
| SlaI | CTCGAG | 4 cut(s) | 216, 274, 2484, 3402 |
| SmaI | CCCGGG | 1 cut(s) | 2520 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 2604, 2685, 2855, 3765 |
| SmlI | CTYRAG | 6 cut(s) | 216, 274, 1287, 2484, 2818, 3402 |
| SmoI | CTYRAG | 6 cut(s) | 216, 274, 1287, 2484, 2818, 3402 |
| SseBI | AGGCCT | 2 cut(s) | 7, 3595 |
| SsiI | CCGC | 3 cut(s) | 1823, 2827, 3738 |
| SspI | AATATT | 2 cut(s) | 2445, 2881 |
| StuI | AGGCCT | 2 cut(s) | 7, 3595 |
| StyI | CCWWGG | 6 cut(s) | 652, 1749, 3128, 3326, 3590, 3755 |
| TaaI | ACNGT | 9 cut(s) | 629, 724, 822, 1060, 1793, 2212, 2380, 2810, 2903 |
| TaiI | ACGT | 9 cut(s) | 1008, 1128, 1473, 1777, 2039, 2247, 2584, 3517, 3785 |
| TaqI | TCGA | 9 cut(s) | 107, 217, 275, 676, 1245, 2368, 2485, 3190, 3403 |
| TatI | WGTACW | 3 cut(s) | 85, 473, 882 |
| TscAI | CASTG | 8 cut(s) | 588, 947, 1176, 1660, 1815, 2145, 2260, 2559 |
| TseFI | GTSAC | 5 cut(s) | 579, 1367, 1617, 2273, 3783 |
| TseI | GCWGC | 3 cut(s) | 615, 2239, 2315 |
| Tsp45I | GTSAC | 5 cut(s) | 579, 1367, 1617, 2273, 3783 |
| TspGWI | ACGGA | 7 cut(s) | 419, 727, 1442, 2359, 3267, 3515, 3591 |
| TspMI | CCCGGG | 1 cut(s) | 2518 |
| TspRI | CASTG | 8 cut(s) | 588, 947, 1176, 1660, 1815, 2145, 2260, 2559 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 3419 |
| VneI | GTGCAC | 1 cut(s) | 2843 |
| VpaK11BI | GGWCC | 6 cut(s) | 1532, 1798, 1907, 2795, 3105, 3518 |
| VspI | ATTAAT | 2 cut(s) | 78, 1671 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 2568, 2821 |
| XapI | RAATTY | 4 cut(s) | 646, 1033, 2281, 2917 |
| XceI | RCATGY | 3 cut(s) | 295, 675, 2860 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 708 |
| XhoI | CTCGAG | 4 cut(s) | 216, 274, 2484, 3402 |
| XmaI | CCCGGG | 1 cut(s) | 2518 |
| XmaJI | CCTAGG | 1 cut(s) | 3590 |
| XmiI | GTMKAC | 2 cut(s) | 107, 2812 |
| ZrmI | AGTACT | 1 cut(s) | 475 |
| Zsp2I | ATGCAT | 3 cut(s) | 712, 2601, 3447 |