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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G13590 AT5G13590 AT5G13590 AT5G13590 AT5G13590 AT5G13590 |
| fragaria_vesca | FvH4_7g20760 |
| malus_domestica | MD01G1117200.v1.1 MD07G1184600.v1.1 |
| prunus_persica | Prupe.2G224500_v2.0.a1 |
| pyrus_communis | pycom01g14480 pycom07g17670 |
| rosa_chinensis | RchiOBHm_Chr1g0365001 |
| rosa_laevigata | RLG00000027451 |
| rosa_multiflora | Rmu_sc0000418.1_g000009 Rmu_ssc0000112.1_g000020 |
| rosa_roxburghii | Rroxscaffold_1G00022860 Rroxscaffold_2G00110440 Rroxscaffold_4G00291580 Rroxscaffold_4G00292010 |
| rosa_rugosa | Rorug01G0318800 Rorug02G0315200 |
| rosa_samantha | Rh1AG327800 Rh1BG289100 Rh1CG305800 Rh1DG320600 |
| rosa_wichuraiana | Rw1G029060 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 1041, 2604, 3489 |
| AatII | GACGTC | 1 cut(s) | 3339 |
| Acc65I | GGTACC | 1 cut(s) | 2218 |
| AccB1I | GGYRCC | 1 cut(s) | 2218 |
| AccI | GTMKAC | 1 cut(s) | 95 |
| AccII | CGCG | 1 cut(s) | 2562 |
| AccIII | TCCGGA | 1 cut(s) | 282 |
| AciI | CCGC | 4 cut(s) | 1640, 2052, 2562, 2782 |
| AclI | AACGTT | 1 cut(s) | 1428 |
| AclWI | GGATC | 4 cut(s) | 1208, 3090, 3168, 3338 |
| AcoI | YGGCCR | 3 cut(s) | 3077, 3304, 3629 |
| AcsI | RAATTY | 6 cut(s) | 255, 574, 1021, 2236, 2863, 3310 |
| AcuI | CTGAAG | 4 cut(s) | 45, 86, 1341, 2679 |
| AcyI | GRCGYC | 1 cut(s) | 3336 |
| AfaI | GTAC | 6 cut(s) | 872, 2220, 2716, 2941, 3006, 3568 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 88, 89, 251, 521, 547, 2537, 2778, 3105, 3491 |
| AflIII | ACRYGT | 1 cut(s) | 3688 |
| AgeI | ACCGGT | 1 cut(s) | 514 |
| AhlI | ACTAGT | 1 cut(s) | 1117 |
| AjiI | CACGTC | 2 cut(s) | 2537, 3461 |
| AjnI | CCWGG | 5 cut(s) | 2214, 2630, 3053, 3067, 3631 |
| AleI | CACNNNNGTG | 1 cut(s) | 264 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2114, 2146 |
| Alw21I | GWGCWC | 3 cut(s) | 1199, 1690, 2800 |
| Alw26I | GTCTC | 7 cut(s) | 836, 2790, 3087, 3147, 3252, 3451, 3500 |
| AlwI | GGATC | 4 cut(s) | 1208, 3090, 3168, 3338 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 383, 710, 2081 |
| Ama87I | CYCGRG | 4 cut(s) | 87, 1254, 2439, 3348 |
| Aor13HI | TCCGGA | 1 cut(s) | 282 |
| ApeKI | GCWGC | 5 cut(s) | 377, 603, 1478, 2270, 3697 |
| ApoI | RAATTY | 6 cut(s) | 255, 574, 1021, 2236, 2863, 3310 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 3359, 3391 |
| AseI | ATTAAT | 1 cut(s) | 1629 |
| AsiGI | ACCGGT | 1 cut(s) | 514 |
| Asp718I | GGTACC | 1 cut(s) | 2218 |
| AspA2I | CCTAGG | 1 cut(s) | 3536 |
| AspLEI | GCGC | 2 cut(s) | 900, 1444 |
| AsuC2I | CCSGG | 2 cut(s) | 252, 3198 |
| AvaI | CYCGRG | 4 cut(s) | 87, 1254, 2439, 3348 |
| AvrII | CCTAGG | 1 cut(s) | 3536 |
| AxyI | CCTNAGG | 1 cut(s) | 324 |
| BanI | GGYRCC | 1 cut(s) | 2218 |
| BanII | GRGCYC | 1 cut(s) | 2000 |
| BarI | GAAGNNNNNNTAC | 6 cut(s) | 2415, 2447, 2575, 2607, 2932, 2964 |
| BauI | CACGAG | 1 cut(s) | 1689 |
| BbsI | GAAGAC | 1 cut(s) | 1176 |
| Bbv12I | GWGCWC | 3 cut(s) | 1199, 1690, 2800 |
| BbvCI | CCTCAGC | 1 cut(s) | 456 |
| BbvI | GCAGC | 5 cut(s) | 389, 615, 1465, 2257, 3709 |
| BceAI | ACGGC | 2 cut(s) | 1356, 3064 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 3380, 3414 |
| BciT130I | CCWGG | 5 cut(s) | 2216, 2632, 3055, 3069, 3633 |
| BciVI | GTATCC | 3 cut(s) | 1243, 1705, 2272 |
| BclI | TGATCA | 1 cut(s) | 1570 |
| BcnI | CCSGG | 2 cut(s) | 252, 3198 |
| BcoDI | GTCTC | 7 cut(s) | 836, 2790, 3087, 3147, 3252, 3451, 3500 |
| BcuI | ACTAGT | 1 cut(s) | 1117 |
| BfmI | CTRYAG | 3 cut(s) | 384, 1782, 2166 |
| BfuI | GTATCC | 3 cut(s) | 1243, 1705, 2272 |
| BglII | AGATCT | 1 cut(s) | 3275 |
| BisI | GCNGC | 5 cut(s) | 378, 604, 1479, 2271, 3698 |
| BlnI | CCTAGG | 1 cut(s) | 3536 |
| BlsI | GCNGC | 5 cut(s) | 379, 605, 1480, 2272, 3699 |
| Bme1390I | CCNGG | 7 cut(s) | 252, 2216, 2632, 3055, 3069, 3198, 3633 |
| BmeT110I | CYCGRG | 4 cut(s) | 87, 1254, 2439, 3348 |
| BmgBI | CACGTC | 2 cut(s) | 2537, 3461 |
| BmiI | GGNNCC | 7 cut(s) | 561, 1791, 1866, 2220, 2303, 2529, 3385 |
| BmrFI | CCNGG | 7 cut(s) | 252, 2216, 2632, 3055, 3069, 3198, 3633 |
| BmrI | ACTGGG | 3 cut(s) | 682, 783, 1098 |
| BmsI | GCATC | 8 cut(s) | 127, 685, 1490, 2095, 2113, 2650, 2831, 2845 |
| BmuI | ACTGGG | 3 cut(s) | 682, 783, 1098 |
| BoxI | GACNNNNGTC | 1 cut(s) | 3264 |
| BpiI | GAAGAC | 1 cut(s) | 1176 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 833, 865, 2770, 2802 |
| BpmI | CTGGAG | 2 cut(s) | 483, 553 |
| Bpu10I | CCTNAGC | 2 cut(s) | 456, 2274 |
| BpuEI | CTTGAG | 2 cut(s) | 247, 2758 |
| BpuMI | CCSGG | 2 cut(s) | 252, 3198 |
| BsaHI | GRCGYC | 1 cut(s) | 3336 |
| BsaI | GGTCTC | 4 cut(s) | 836, 2790, 3147, 3252 |
| BsaWI | WCCGGW | 3 cut(s) | 282, 514, 540 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 88, 89, 251, 521, 547, 2537, 2778, 3105, 3491 |
| Bse118I | RCCGGY | 1 cut(s) | 514 |
| Bse21I | CCTNAGG | 1 cut(s) | 324 |
| Bse3DI | GCAATG | 1 cut(s) | 183 |
| BseAI | TCCGGA | 1 cut(s) | 282 |
| BseBI | CCWGG | 5 cut(s) | 2216, 2632, 3055, 3069, 3633 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 88, 89, 251, 521, 547, 2537, 2778, 3105, 3491 |
| BseMI | GCAATG | 1 cut(s) | 183 |
| BseMII | CTCAG | 4 cut(s) | 315, 447, 1499, 2501 |
| BseRI | GAGGAG | 2 cut(s) | 9, 3025 |
| BseXI | GCAGC | 5 cut(s) | 389, 615, 1465, 2257, 3709 |
| BseYI | CCCAGC | 1 cut(s) | 82 |
| BsgI | GTGCAG | 1 cut(s) | 303 |
| Bsh1236I | CGCG | 1 cut(s) | 2562 |
| BshNI | GGYRCC | 1 cut(s) | 2218 |
| BshTI | ACCGGT | 1 cut(s) | 514 |
| BsiHKAI | GWGCWC | 3 cut(s) | 1199, 1690, 2800 |
| BsiHKCI | CYCGRG | 4 cut(s) | 87, 1254, 2439, 3348 |
| BsiSI | CCGG | 8 cut(s) | 252, 283, 515, 541, 761, 2305, 3198, 3307 |
| BslFI | GGGAC | 4 cut(s) | 1864, 1878, 2612, 3617 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 88, 89, 251, 521, 547, 2537, 2778, 3105, 3491 |
| BsmAI | GTCTC | 7 cut(s) | 836, 2790, 3087, 3147, 3252, 3451, 3500 |
| BsmBI | CGTCTC | 2 cut(s) | 3087, 3451 |
| BsmFI | GGGAC | 4 cut(s) | 1864, 1878, 2612, 3617 |
| BsmI | GAATGC | 2 cut(s) | 1417, 3391 |
| Bso31I | GGTCTC | 4 cut(s) | 836, 2790, 3147, 3252 |
| BsoBI | CYCGRG | 4 cut(s) | 87, 1254, 2439, 3348 |
| Bsp1286I | GDGCHC | 4 cut(s) | 1199, 1690, 2000, 2800 |
| Bsp13I | TCCGGA | 1 cut(s) | 282 |
| Bsp1407I | TGTACA | 1 cut(s) | 3004 |
| Bsp19I | CCATGG | 1 cut(s) | 3074 |
| BspACI | CCGC | 4 cut(s) | 1640, 2052, 2562, 2782 |
| BspCNI | CTCAG | 4 cut(s) | 316, 448, 1498, 2502 |
| BspEI | TCCGGA | 1 cut(s) | 282 |
| BspFNI | CGCG | 1 cut(s) | 2562 |
| BspLI | GGNNCC | 7 cut(s) | 561, 1791, 1866, 2220, 2303, 2529, 3385 |
| BspPI | GGATC | 4 cut(s) | 1208, 3090, 3168, 3338 |
| BspT107I | GGYRCC | 1 cut(s) | 2218 |
| BspTNI | GGTCTC | 4 cut(s) | 836, 2790, 3147, 3252 |
| BsrDI | GCAATG | 1 cut(s) | 183 |
| BsrFI | RCCGGY | 1 cut(s) | 514 |
| BsrGI | TGTACA | 1 cut(s) | 3004 |
| BssAI | RCCGGY | 1 cut(s) | 514 |
| BssNI | GRCGYC | 1 cut(s) | 3336 |
| BssSI | CACGAG | 1 cut(s) | 1689 |
| BssT1I | CCWWGG | 6 cut(s) | 205, 640, 2158, 3074, 3536, 3701 |
| Bst2BI | CACGAG | 1 cut(s) | 1689 |
| Bst2UI | CCWGG | 5 cut(s) | 2216, 2632, 3055, 3069, 3633 |
| Bst4CI | ACNGT | 9 cut(s) | 385, 712, 810, 1048, 1062, 1541, 2167, 2335, 3266 |
| Bst6I | CTCTTC | 3 cut(s) | 163, 3250, 3734 |
| BstACI | GRCGYC | 1 cut(s) | 3336 |
| BstAUI | TGTACA | 1 cut(s) | 3004 |
| BstC8I | GCNNGC | 1 cut(s) | 447 |
| BstDEI | CTNAG | 7 cut(s) | 324, 456, 902, 1485, 1500, 2274, 2510 |
| BstDSI | CCRYGG | 2 cut(s) | 3074, 3262 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2776 |
| BstFNI | CGCG | 1 cut(s) | 2562 |
| BstHHI | GCGC | 2 cut(s) | 900, 1444 |
| BstMAI | GTCTC | 7 cut(s) | 836, 2790, 3087, 3147, 3252, 3451, 3500 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 377, 3703 |
| BstNI | CCWGG | 5 cut(s) | 2216, 2632, 3055, 3069, 3633 |
| BstNSI | RCATGY | 1 cut(s) | 2806 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 3264 |
| BstSCI | CCNGG | 7 cut(s) | 250, 2214, 2630, 3053, 3067, 3196, 3631 |
| BstSFI | CTRYAG | 3 cut(s) | 384, 1782, 2166 |
| BstUI | CGCG | 1 cut(s) | 2562 |
| BstV1I | GCAGC | 5 cut(s) | 389, 615, 1465, 2257, 3709 |
| BstV2I | GAAGAC | 1 cut(s) | 1176 |
| BstX2I | RGATCY | 4 cut(s) | 3095, 3173, 3275, 3343 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 961, 2845 |
| BstYI | RGATCY | 4 cut(s) | 3095, 3173, 3275, 3343 |
| Bsu36I | CCTNAGG | 1 cut(s) | 324 |
| BsuI | GTATCC | 3 cut(s) | 1243, 1705, 2272 |
| BtgI | CCRYGG | 2 cut(s) | 3074, 3262 |
| BtrI | CACGTC | 2 cut(s) | 2537, 3461 |
| BtsIMutI | CAGTG | 6 cut(s) | 569, 935, 1618, 2189, 2208, 2507 |
| Cac8I | GCNNGC | 1 cut(s) | 447 |
| CaiI | CAGNNNCTG | 3 cut(s) | 383, 710, 2081 |
| CfoI | GCGC | 2 cut(s) | 900, 1444 |
| Cfr10I | RCCGGY | 1 cut(s) | 514 |
| CsiI | ACCWGGT | 1 cut(s) | 2214 |
| Csp6I | GTAC | 6 cut(s) | 871, 2219, 2715, 2940, 3005, 3567 |
| CspAI | ACCGGT | 1 cut(s) | 514 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 1227, 1262, 1794, 1829 |
| CviQI | GTAC | 6 cut(s) | 871, 2219, 2715, 2940, 3005, 3567 |
| DdeI | CTNAG | 7 cut(s) | 324, 456, 902, 1485, 1500, 2274, 2510 |
| DraI | TTTAAA | 2 cut(s) | 226, 483 |
| EaeI | YGGCCR | 3 cut(s) | 3077, 3304, 3629 |
| Eam1104I | CTCTTC | 3 cut(s) | 163, 3250, 3734 |
| EarI | CTCTTC | 3 cut(s) | 163, 3250, 3734 |
| Eco130I | CCWWGG | 6 cut(s) | 205, 640, 2158, 3074, 3536, 3701 |
| Eco147I | AGGCCT | 1 cut(s) | 3541 |
| Eco24I | GRGCYC | 1 cut(s) | 2000 |
| Eco31I | GGTCTC | 4 cut(s) | 836, 2790, 3147, 3252 |
| Eco32I | GATATC | 1 cut(s) | 981 |
| Eco57I | CTGAAG | 4 cut(s) | 45, 86, 1341, 2679 |
| Eco81I | CCTNAGG | 1 cut(s) | 324 |
| Eco88I | CYCGRG | 4 cut(s) | 87, 1254, 2439, 3348 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2776 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1865 |
| EcoRI | GAATTC | 1 cut(s) | 255 |
| EcoRII | CCWGG | 5 cut(s) | 2214, 2630, 3053, 3067, 3631 |
| EcoRV | GATATC | 1 cut(s) | 981 |
| EcoT14I | CCWWGG | 6 cut(s) | 205, 640, 2158, 3074, 3536, 3701 |
| EcoT22I | ATGCAT | 3 cut(s) | 700, 2846, 3393 |
| EcoT38I | GRGCYC | 1 cut(s) | 2000 |
| ErhI | CCWWGG | 6 cut(s) | 205, 640, 2158, 3074, 3536, 3701 |
| Esp3I | CGTCTC | 2 cut(s) | 3087, 3451 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 282, 314, 287, 319, 1911, 1943 |
| FaqI | GGGAC | 4 cut(s) | 1864, 1878, 2612, 3617 |
| FauNDI | CATATG | 1 cut(s) | 2953 |
| FbaI | TGATCA | 1 cut(s) | 1570 |
| FblI | GTMKAC | 1 cut(s) | 95 |
| Fnu4HI | GCNGC | 5 cut(s) | 378, 604, 1479, 2271, 3698 |
| FriOI | GRGCYC | 1 cut(s) | 2000 |
| Fsp4HI | GCNGC | 5 cut(s) | 378, 604, 1479, 2271, 3698 |
| GlaI | GCGC | 2 cut(s) | 899, 1443 |
| GluI | GCNGC | 5 cut(s) | 378, 604, 1479, 2271, 3698 |
| GsaI | CCCAGC | 1 cut(s) | 86 |
| GsuI | CTGGAG | 2 cut(s) | 483, 553 |
| HapII | CCGG | 8 cut(s) | 252, 283, 515, 541, 761, 2305, 3198, 3307 |
| HhaI | GCGC | 2 cut(s) | 900, 1444 |
| Hin1I | GRCGYC | 1 cut(s) | 3336 |
| Hin6I | GCGC | 2 cut(s) | 898, 1442 |
| HinP1I | GCGC | 2 cut(s) | 898, 1442 |
| HincII | GTYRAC | 3 cut(s) | 96, 796, 1090 |
| HindII | GTYRAC | 3 cut(s) | 96, 796, 1090 |
| HindIII | AAGCTT | 2 cut(s) | 296, 1452 |
| HpaI | GTTAAC | 2 cut(s) | 796, 1090 |
| HpaII | CCGG | 8 cut(s) | 252, 283, 515, 541, 761, 2305, 3198, 3307 |
| Hpy166II | GTNNAC | 7 cut(s) | 96, 796, 908, 1090, 2934, 3154, 3464 |
| Hpy8I | GTNNAC | 7 cut(s) | 96, 796, 908, 1090, 2934, 3154, 3464 |
| HpyCH4III | ACNGT | 9 cut(s) | 385, 712, 810, 1048, 1062, 1541, 2167, 2335, 3266 |
| HpyCH4IV | ACGT | 8 cut(s) | 1092, 1343, 1428, 2536, 3336, 3460, 3690, 3728 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 377, 3703 |
| HpyF3I | CTNAG | 7 cut(s) | 324, 456, 902, 1485, 1500, 2274, 2510 |
| HpySE526I | ACGT | 8 cut(s) | 1092, 1343, 1428, 2536, 3336, 3460, 3690, 3728 |
| Hsp92I | GRCGYC | 1 cut(s) | 3336 |
| HspAI | GCGC | 2 cut(s) | 898, 1442 |
| Kpn2I | TCCGGA | 1 cut(s) | 282 |
| KpnI | GGTACC | 1 cut(s) | 2222 |
| Ksp22I | TGATCA | 1 cut(s) | 1570 |
| KspAI | GTTAAC | 2 cut(s) | 796, 1090 |
| Lsp1109I | GCAGC | 5 cut(s) | 389, 615, 1465, 2257, 3709 |
| LweI | GCATC | 8 cut(s) | 127, 685, 1490, 2095, 2113, 2650, 2831, 2845 |
| MabI | ACCWGGT | 1 cut(s) | 2214 |
| MaeII | ACGT | 8 cut(s) | 1092, 1343, 1428, 2536, 3336, 3460, 3690, 3728 |
| MfeI | CAATTG | 1 cut(s) | 1272 |
| MflI | RGATCY | 4 cut(s) | 3095, 3173, 3275, 3343 |
| MhlI | GDGCHC | 4 cut(s) | 1199, 1690, 2000, 2800 |
| MlyI | GAGTC | 8 cut(s) | 13, 50, 91, 842, 878, 2225, 3052, 3304 |
| MmeI | TCCRAC | 5 cut(s) | 763, 1315, 2368, 2773, 2851 |
| Mph1103I | ATGCAT | 3 cut(s) | 700, 2846, 3393 |
| MroI | TCCGGA | 1 cut(s) | 282 |
| MslI | CAYNNNNRTG | 4 cut(s) | 264, 1332, 2640, 3711 |
| MspA1I | CMGCKG | 1 cut(s) | 2052 |
| MspI | CCGG | 8 cut(s) | 252, 283, 515, 541, 761, 2305, 3198, 3307 |
| MspR9I | CCNGG | 7 cut(s) | 252, 2216, 2632, 3055, 3069, 3198, 3633 |
| MunI | CAATTG | 1 cut(s) | 1272 |
| Mva1269I | GAATGC | 2 cut(s) | 1417, 3391 |
| MvaI | CCWGG | 5 cut(s) | 2216, 2632, 3055, 3069, 3633 |
| MvnI | CGCG | 1 cut(s) | 2562 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 377, 3703 |
| NciI | CCSGG | 2 cut(s) | 252, 3198 |
| NcoI | CCATGG | 1 cut(s) | 3074 |
| NdeI | CATATG | 1 cut(s) | 2953 |
| NlaIV | GGNNCC | 7 cut(s) | 561, 1791, 1866, 2220, 2303, 2529, 3385 |
| NmuCI | GTSAC | 8 cut(s) | 328, 527, 567, 1334, 1408, 2143, 2228, 3729 |
| NsiI | ATGCAT | 3 cut(s) | 700, 2846, 3393 |
| NspI | RCATGY | 1 cut(s) | 2806 |
| OliI | CACNNNNGTG | 1 cut(s) | 264 |
| PaeR7I | CTCGAG | 3 cut(s) | 1254, 2439, 3348 |
| PceI | AGGCCT | 1 cut(s) | 3541 |
| PctI | GAATGC | 2 cut(s) | 1417, 3391 |
| PfoI | TCCNGGA | 2 cut(s) | 3053, 3196 |
| PinAI | ACCGGT | 1 cut(s) | 514 |
| PkrI | GCNGC | 5 cut(s) | 379, 605, 1480, 2272, 3699 |
| PleI | GAGTC | 8 cut(s) | 12, 50, 91, 842, 878, 2225, 3052, 3303 |
| PpsI | GAGTC | 8 cut(s) | 12, 50, 91, 842, 878, 2225, 3052, 3303 |
| PpuMI | RGGWCCY | 1 cut(s) | 1865 |
| PshAI | GACNNNNGTC | 1 cut(s) | 3264 |
| PshBI | ATTAAT | 1 cut(s) | 1629 |
| PsiI | TTATAA | 3 cut(s) | 1041, 2604, 3489 |
| Psp1406I | AACGTT | 1 cut(s) | 1428 |
| Psp5II | RGGWCCY | 1 cut(s) | 1865 |
| Psp6I | CCWGG | 5 cut(s) | 2214, 2630, 3053, 3067, 3631 |
| PspFI | CCCAGC | 1 cut(s) | 82 |
| PspGI | CCWGG | 5 cut(s) | 2214, 2630, 3053, 3067, 3631 |
| PspN4I | GGNNCC | 7 cut(s) | 561, 1791, 1866, 2220, 2303, 2529, 3385 |
| PspPPI | RGGWCCY | 1 cut(s) | 1865 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 106, 138 |
| PstNI | CAGNNNCTG | 3 cut(s) | 383, 710, 2081 |
| PsuI | RGATCY | 4 cut(s) | 3095, 3173, 3275, 3343 |
| RsaI | GTAC | 6 cut(s) | 872, 2220, 2716, 2941, 3006, 3568 |
| RsaNI | GTAC | 6 cut(s) | 871, 2219, 2715, 2940, 3005, 3567 |
| RseI | CAYNNNNRTG | 4 cut(s) | 264, 1332, 2640, 3711 |
| SalI | GTCGAC | 1 cut(s) | 94 |
| SatI | GCNGC | 5 cut(s) | 378, 604, 1479, 2271, 3698 |
| SchI | GAGTC | 8 cut(s) | 13, 50, 91, 842, 878, 2225, 3052, 3304 |
| ScrFI | CCNGG | 7 cut(s) | 252, 2216, 2632, 3055, 3069, 3198, 3633 |
| SduI | GDGCHC | 4 cut(s) | 1199, 1690, 2000, 2800 |
| SexAI | ACCWGGT | 1 cut(s) | 2214 |
| SfaNI | GCATC | 8 cut(s) | 127, 685, 1490, 2095, 2113, 2650, 2831, 2845 |
| SfcI | CTRYAG | 3 cut(s) | 384, 1782, 2166 |
| Sfr274I | CTCGAG | 3 cut(s) | 1254, 2439, 3348 |
| SlaI | CTCGAG | 3 cut(s) | 1254, 2439, 3348 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 264, 1332, 2640, 3711 |
| SmlI | CTYRAG | 5 cut(s) | 262, 1254, 2439, 2773, 3348 |
| SmoI | CTYRAG | 5 cut(s) | 262, 1254, 2439, 2773, 3348 |
| SpeI | ACTAGT | 1 cut(s) | 1117 |
| SseBI | AGGCCT | 1 cut(s) | 3541 |
| SsiI | CCGC | 4 cut(s) | 1640, 2052, 2562, 2782 |
| SspI | AATATT | 3 cut(s) | 1534, 2400, 2827 |
| StuI | AGGCCT | 1 cut(s) | 3541 |
| StyD4I | CCNGG | 7 cut(s) | 250, 2214, 2630, 3053, 3067, 3196, 3631 |
| StyI | CCWWGG | 6 cut(s) | 205, 640, 2158, 3074, 3536, 3701 |
| TaaI | ACNGT | 9 cut(s) | 385, 712, 810, 1048, 1062, 1541, 2167, 2335, 3266 |
| TaiI | ACGT | 8 cut(s) | 1095, 1346, 1431, 2539, 3339, 3463, 3693, 3731 |
| TaqII | GACCGA | 2 cut(s) | 860, 3021 |
| TatI | WGTACW | 2 cut(s) | 870, 3004 |
| TscAI | CASTG | 6 cut(s) | 576, 935, 1618, 2189, 2215, 2514 |
| TseFI | GTSAC | 8 cut(s) | 328, 527, 567, 1334, 1408, 2143, 2228, 3729 |
| TseI | GCWGC | 5 cut(s) | 377, 603, 1478, 2270, 3697 |
| Tsp45I | GTSAC | 8 cut(s) | 328, 527, 567, 1334, 1408, 2143, 2228, 3729 |
| TspGWI | ACGGA | 5 cut(s) | 1868, 2314, 3213, 3461, 3537 |
| TspRI | CASTG | 6 cut(s) | 576, 935, 1618, 2189, 2215, 2514 |
| VspI | ATTAAT | 1 cut(s) | 1629 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2776 |
| XapI | RAATTY | 6 cut(s) | 255, 574, 1021, 2236, 2863, 3310 |
| XceI | RCATGY | 1 cut(s) | 2806 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 696 |
| XhoI | CTCGAG | 3 cut(s) | 1254, 2439, 3348 |
| XmaJI | CCTAGG | 1 cut(s) | 3536 |
| XmiI | GTMKAC | 1 cut(s) | 95 |
| ZraI | GACGTC | 1 cut(s) | 3337 |
| Zsp2I | ATGCAT | 3 cut(s) | 700, 2846, 3393 |