Rroxscaffold_4G00291580

No description available

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
Physical Location & Seq
Reverse (-)
11997446 .. 12004523
7078 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00291580.1

Sequence Viewer

Length: 4146 bp
ATGTCTGGACGTGGCAAGGGAGGCAAGGGATTGGGAAAGGGAGGAGCGAAACGACACCGTAAGGTCCTCCGCGACAACATCCAGGGGATCACCAAGCCGGCCATTCGTCGTTTGGCTCGCAGAGGAGGTGTGAAGCGTATCAGTGGTTTGATTTATGAGGAGACCCCGAGGTTATATGTGTACTGGTTGAGTGTGATAGCTAGACTATACCGAGAGGAACTGTATGATCTACGAAGGTTACTGAATTTGGTAGTAGAAAATAGGAGTGTAGCTGCACAGAGAACAGTAATATTAAGCTTGCGAAAGCTTGGAGTCATGCCGCAATCAGGAAATGAAGAGACTGGGGTTAAACCCGTTACCTGGAAATCTAGTGATTATATTGCAGGTGTTCCTATCAAGAAAAGGAGGTTCCCAATGTTGAGACCTCCTTCACCCCCACCTGAAGAACCATCTTTTCCCCCTTCAAAAATGGATTCAGTACAAAAGGAACAATCTAGCCAATCTCAGGGGTCGACTATTTCACATGCTAGTGTTGCAACTAGTTCCGAAATTTCTGATCCAACCAAAGCTCCTGGGTCTGTTGATAGAAGAGGAAGCTCTGATGTTAAAAATGTTAATATGGTCCAAAGGAATGATAATACCGTTAGAGTCAAAGTTGAACAGCCTAGCCTTAGAGATCATTTGGGTTCTTCAGATGACTTGCAGAGGAAAGGGAAGTTTGTGATGGCTGATAATCCTGCACCCCAGATGACTTTAGGGAGAAATGAGTTGAATTTGAGACCAACTGAAGCTCCTGTATCTAGTTTAAGTAAGGGTATTATGCATAGCAAACACAGAGCAGAAATGAAATGTAAAGAAGAGATGCCTGCTATTGCTGAGGGTACTGAATTATCATTAGCTTTGAAGGAACGTCTTTTTCCATCTTTGACAGGCCAAAAGAGTGATAGTGGTGTGAGTCACCCTAGTCAGGATAGGTCAGAACCTATTTCCCTGAATTTGTCTTTAAGTAAAGAGAAAATCAGTGGTCAATGCAATAGTAAGGACGGAGATTTGAAAGTCCATGGTGCTCAGTTGCAAGCATGTAGAGCAAACTGGGATTTGAATACACCAATGGATGCATGGGGAGATTCTGTTAATGATGCTCTAGTATCTGTTGATCGGATCAATGCAAAAGGTGGGGGACATGCTGTTAGCTCAATTGGGATGGTTGAAGGTGGTGTTAGCTCAGAAAGACAGAGTAATGTTGAGAGTCACAAAAGAACTAATTTGACCATGTTGTCCAAACTAGATAGCCAGCAATATAAGCCCAATGATTCTCTTCTTTTACGCCTTAGTTCTTCTTGCTCACTGCCAAACCTGTGTCAAACACCTAGTTCATCCATTGCGTTTGAGTTCGATGGGAGGACTTCTGCTGCAAACTTGCCTAGGGTGGCAGGGCCAACTAGCAATCTGAACTTGGGTAATCATAGAACCGTGAAACCAGAGCCATTTGATGAGAGAGTCAAACAGGAACCCAGTAGTATGGGACCATTGAATATTAGAGCAGGGAAGCATGGAGTAGTTGAGCGTTCCACTGTTGGAGCTGTTCACTCCTCAAATTCGACCAAAGGGAAATCAGTCCAACTGGACAAACATGTGATAAATGGTCCGGATGATCGTCCTTTTGACATGAAATTGCCTGTTGCTTCAGAGATATCTCGCCCTGCTGGAAAGCCTTGTTTGACAGAGTCGACTGGGCAGCCTTCTTGTTCAACAGAGTTGACTGTGACTCAGGATGTGATAAACCATTCAGGAGACTCTAATGGAAGGCTGCCTCACGAAGCTTGTCAAAGCAATGAGAAAGTTGCTATATCCGTGGGCCATGATAGTAAGGTAAACAACATGCAAACTAAAGATGACAATGTTGATATTCAGAGTTGTAAATTGAAATTGATGATTGATCAACCCCTTGATTCTCGTGGAAGTGGTGGAACCAGTGATGAGGAAAAGATAAATATATCAACAGATATGCTGGAAGATTCTTATGGTACTGATTATGAATCAGATGGTAATCATGCTATAGATACAGCTATTGAGACTAAAGAAGGTAAAGATGATGACTACGAAGATGGCGAGGTCAGAGATTTACTTCTGGATACAGCAGTCCAGGATGAGCTCATAAGTGAGTCAAGAGAAGTGGAAAATGCCAACCATGATGATTTTGATAATGGAAGGACAGAGTGTGTGGGACCTGTTGATATTGTTCATCATACTTCATTCCATGTTGAGGCAAAAGACAACAAAACAGACAATCTTGCTGGAACAAGTAACAATGATCTTGAAGAATCTGCTGATATAGATCTTAATATTGAATCTGACAAGGGCTGTGATAATGATGTGTGCTTGCAAGAAGCATCGTTTGTTGAAAAGCTAACGAGCTCTGAGGGCATGAAAGGGTCCATCAGCGCTGTGACAATAGAACCACTCAATGATCAATCTAGGAAGAGAGATTCCCAGAAGTGTCAGGATGCAGAGTTATCCTCGGAGCAAGTCACTATAGGAAGCCAAGGAACTGCAGTAGCTATTGCTCAGGATACTGAGCTGAATGTTAATAAAACTGAACCTGTACTGACGAGTGATTCAACTTTGTCCAAAACTTCTGGTAGTGGTGATAATGCGACTAAGGATACCAGTAATGGAGGACAGCGGAGCCGGATTATAACTTTGCCTCGATCTTTAAATGGGTCTCCTACTAGATCAAGATCAATTCCAGACCAGCCATTTCCATCAAGAGCTGGAAGAGAAATTTTACCTGATGTAACACCAGATGACGATAAACTATATCCTCGAGGGAGAGGTGAAACGTATGTTGACGATCCCTACAGATTTTCAAGGGATCAGTACCAAGATCGGTCATGGAGGAATTCTAGAGTGAATTTTAGACGTGGTAGAGGGAGGATGAATAACCGCGGGGATTGGAGTTCTGATCGTTACTTTGCAGCGGAGCGTTATTATAATCAAACAAAGTACCGTGTTCCAAGACATAAATATGTTAATGTCGTTTCTGACGCTGACCTCGAATATAATAATTATAATATGGCTTCAGATGGTGCATTTGTTGGCCGTGGAGGGAGAAAGCTTTCAAATGATGGACCAATTAACCACCGTATACCCTCAAGGAGACGGTCTCCTGTTGGGGGACCTATACTTCATGTGCCTCGCAGAAATCCCAGAAATTTTAGTCCAAGTAGATGCATTGGTGAAGATACTTCAGATTTGGTTGGCATGAGGCATAATGAGAAGCTTATGAGAGGCTTTCCTGATGATTCTGTAGATCCCATGTTCAATCGTACCCAACCTTCATATGAGGGAGGTGGTCAGTTTGGACGAGGGCGAGGAAATAGGACCTTTTCTTTTGTTCAGCAAAGAGGTATTCGAGTTCGTTCAAAGTCTCCAATAAGGACCAGAACTCGTTCTCCTGTGCCATGGTCATCTCCTAGAAGAAGATCCCCCGATGGATTTGGTGGGCTTGGAGAATTGAGCCATCGAACACCAAATTACAGGATGGAGAGGTTTAGATCCCCTGATGGGACATCTTTTACCGGAGAAATGGTAGTCAGAAGAAATCCGCCAAATGATTTGAGGGATATGGATACTGTAAGAGACCATGGTCATCAAAGGTCTGGCATTCATAGGAGTCCTTCTTCCCGTGTTTTACTCAGAAACAGGAGATTTGATGTCATAGATCCTCGAGAAAGGGCGGACAATAATGAGTTCTTTGCAGGTGGGGGGCCTATGCATTCTGGTCGGTTGCATGAGCTTGGTGGGGATGGAAATGCTGATGAGAGGAGAAGGTTTGGTGAGAGACGGGGACCTGTCCGTACATTTAGGCCTCCTTATAACAGTGCTGATGGTGAGACATTTCATGTTAACACAGAGGATGGCCCCAGGCCTTTCCGGTTCTGCCCAGATGGTGAAACTGAGTTTCAAGAAAGAGGCAATTTGAGAGAGAGAGATTTTGACAGAAGGATAAAGAGCAGGCCAGGAAATGCACCTAGAAGAATGAGAAGCATTGAAGATCAGGAAGGAAATTTCAGGAGCGATGGACAGCCATGGAATGATGGTGGTTTTGATGATATCTCACGGGCGAAGAGAAAAAGGTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1381

Amino Acids

153.32

Weight (kDa)

8.83

Isoelectric Point (pI)

56.63

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 4 cut(s) 2699, 2994, 3072, 3879
AarI CACCTGC 2 cut(s) 374, 3752
AasI GACNNNNNNGTC 1 cut(s) 1276
AbsI CCTCGAGG 1 cut(s) 2826
Acc36I ACCTGC 2 cut(s) 374, 3752
AccI GTMKAC 3 cut(s) 512, 1730, 3148
AccII CGCG 2 cut(s) 72, 2949
AccIII TCCGGA 1 cut(s) 1648
AciI CCGC 8 cut(s) 70, 320, 2686, 2947, 2949, 2981, 3608, 3740
AclWI GGATC 9 cut(s) 95, 551, 1169, 2849, 2883, 3308, 3480, 3552, 3719
AcoI YGGCCR 2 cut(s) 99, 3100
AcuI CTGAAG 6 cut(s) 462, 675, 807, 1671, 3066, 3234
AfaI GTAC 9 cut(s) 182, 480, 883, 2029, 2607, 2882, 3008, 3331, 3862
AfeI AGCGCT 1 cut(s) 2446
AfiI CCNNNNNNNGG 7 cut(s) 326, 360, 505, 967, 2266, 3176, 3567
AflIII ACRYGT 1 cut(s) 1633
AhlI ACTAGT 1 cut(s) 539
AjiI CACGTC 2 cut(s) 11, 2924
AjnI CCWGG 6 cut(s) 81, 359, 571, 2145, 3926, 4021
AloI GAACNNNNNNTCC 2 cut(s) 3439, 3471
Alw21I GWGCWC 3 cut(s) 1069, 2157, 2420
AlwI GGATC 9 cut(s) 95, 551, 1169, 2849, 2883, 3308, 3480, 3552, 3719
Ama87I CYCGRG 3 cut(s) 166, 2826, 3729
Aor13HI TCCGGA 1 cut(s) 1648
Aor51HI AGCGCT 1 cut(s) 2446
ApeKI GCWGC 5 cut(s) 272, 1412, 1738, 1810, 2978
Asp700I GAANNNNTTC 2 cut(s) 3118, 3451
AspA2I CCTAGG 1 cut(s) 1424
AspLEI GCGC 1 cut(s) 2447
AsuHPI GGTGA 9 cut(s) 82, 423, 950, 2660, 2849, 3251, 3851, 3905, 3965
AvaI CYCGRG 3 cut(s) 166, 2826, 3729
AvrII CCTAGG 1 cut(s) 1424
BaeI ACNNNNGTAYC 2 cut(s) 2127, 2160
BanII GRGCYC 2 cut(s) 2157, 2420
BarI GAAGNNNNNNTAC 2 cut(s) 3322, 3354
BauI CACGAG 1 cut(s) 1956
Bbv12I GWGCWC 3 cut(s) 1069, 2157, 2420
BbvCI CCTCAGC 1 cut(s) 876
BbvI GCAGC 5 cut(s) 259, 1399, 1750, 1797, 2990
BceAI ACGGC 1 cut(s) 3087
BcgI CGANNNNNNTGC 2 cut(s) 3767, 3801
BciT130I CCWGG 6 cut(s) 83, 361, 573, 2147, 3928, 4023
BciVI GTATCC 4 cut(s) 2128, 2566, 2659, 3625
BclI TGATCA 2 cut(s) 1939, 2470
BcuI ACTAGT 1 cut(s) 539
BfmI CTRYAG 5 cut(s) 2058, 2535, 2553, 2860, 3309
BfoI RGCGCY 1 cut(s) 2448
BfuAI ACCTGC 2 cut(s) 374, 3752
BfuI GTATCC 4 cut(s) 2128, 2566, 2659, 3625
BglII AGATCT 1 cut(s) 2338
BisI GCNGC 6 cut(s) 273, 320, 1413, 1739, 1811, 2979
BlnI CCTAGG 1 cut(s) 1424
BlsI GCNGC 6 cut(s) 274, 321, 1414, 1740, 1812, 2980
Bme1390I CCNGG 6 cut(s) 83, 361, 573, 2147, 3928, 4023
BmeT110I CYCGRG 3 cut(s) 166, 2826, 3729
BmgBI CACGTC 2 cut(s) 11, 2924
BmrFI CCNGG 6 cut(s) 83, 361, 573, 2147, 3928, 4023
BmrI ACTGGG 4 cut(s) 351, 1102, 1509, 1743
BmsI GCATC 6 cut(s) 852, 1105, 1129, 2402, 2497, 3221
BmuI ACTGGG 4 cut(s) 351, 1102, 1509, 1743
BoxI GACNNNNGTC 1 cut(s) 3648
BplI GAGNNNNNCTC 4 cut(s) 2504, 2536, 3151, 3183
Bpu10I CCTNAGC 2 cut(s) 876, 2568
BpuEI CTTGAG 1 cut(s) 3139
BsaBI GATNNNNATC 3 cut(s) 2049, 2337, 2740
BsaI GGTCTC 6 cut(s) 155, 415, 772, 2730, 3171, 3636
BsaWI WCCGGW 3 cut(s) 1648, 3581, 3936
Bsc4I CCNNNNNNNGG 7 cut(s) 326, 360, 505, 967, 2266, 3176, 3567
Bse118I RCCGGY 1 cut(s) 97
Bse1I ACTGG 8 cut(s) 188, 346, 1097, 1515, 1629, 1738, 1974, 2670
Bse3DI GCAATG 2 cut(s) 1380, 1840
Bse8I GATNNNNATC 3 cut(s) 2049, 2337, 2740
BseAI TCCGGA 1 cut(s) 1648
BseBI CCWGG 6 cut(s) 83, 361, 573, 2147, 3928, 4023
BseJI GATNNNNATC 3 cut(s) 2049, 2337, 2740
BseLI CCNNNNNNNGG 7 cut(s) 326, 360, 505, 967, 2266, 3176, 3567
BseMI GCAATG 2 cut(s) 1380, 1840
BseNI ACTGG 8 cut(s) 188, 346, 1097, 1515, 1629, 1738, 1974, 2670
BseRI GAGGAG 5 cut(s) 57, 138, 173, 1582, 3841
BseXI GCAGC 5 cut(s) 259, 1399, 1750, 1797, 2990
BsgI GTGCAG 2 cut(s) 258, 723
Bsh1236I CGCG 2 cut(s) 72, 2949
BsiHKAI GWGCWC 3 cut(s) 1069, 2157, 2420
BsiHKCI CYCGRG 3 cut(s) 166, 2826, 3729
BsiSI CCGG 5 cut(s) 98, 1649, 2692, 3582, 3937
BslFI GGGAC 6 cut(s) 1194, 1539, 2241, 3192, 3583, 3864
BslI CCNNNNNNNGG 7 cut(s) 326, 360, 505, 967, 2266, 3176, 3567
BsmBI CGTCTC 2 cut(s) 3154, 3838
BsmFI GGGAC 6 cut(s) 1194, 1539, 2241, 3192, 3583, 3864
BsmI GAATGC 2 cut(s) 3666, 3778
Bso31I GGTCTC 6 cut(s) 155, 415, 772, 2730, 3171, 3636
BsoBI CYCGRG 3 cut(s) 166, 2826, 3729
Bsp1286I GDGCHC 3 cut(s) 1069, 2157, 2420
Bsp13I TCCGGA 1 cut(s) 1648
Bsp19I CCATGG 4 cut(s) 1060, 3464, 3646, 4091
BspACI CCGC 8 cut(s) 70, 320, 2686, 2947, 2949, 2981, 3608, 3740
BspEI TCCGGA 1 cut(s) 1648
BspFNI CGCG 2 cut(s) 72, 2949
BspMAI CTGCAG 1 cut(s) 2557
BspMI ACCTGC 2 cut(s) 374, 3752
BspPI GGATC 9 cut(s) 95, 551, 1169, 2849, 2883, 3308, 3480, 3552, 3719
BspTNI GGTCTC 6 cut(s) 155, 415, 772, 2730, 3171, 3636
BsrDI GCAATG 2 cut(s) 1380, 1840
BsrFI RCCGGY 1 cut(s) 97
BsrI ACTGG 8 cut(s) 188, 346, 1097, 1515, 1629, 1738, 1974, 2670
BssAI RCCGGY 1 cut(s) 97
BssNAI GTATAC 1 cut(s) 3149
BssSI CACGAG 1 cut(s) 1956
BssT1I CCWWGG 6 cut(s) 1060, 1424, 2545, 3464, 3646, 4091
Bst1107I GTATAC 1 cut(s) 3149
Bst2BI CACGAG 1 cut(s) 1956
Bst2UI CCWGG 6 cut(s) 83, 361, 573, 2147, 3928, 4023
Bst6I CTCTTC 7 cut(s) 330, 583, 852, 1323, 2477, 2773, 4124
BstC8I GCNNGC 8 cut(s) 99, 118, 299, 867, 1077, 1295, 2384, 4019
BstDSI CCRYGG 7 cut(s) 1060, 1854, 2947, 3103, 3464, 3646, 4091
BstFNI CGCG 2 cut(s) 72, 2949
BstH2I RGCGCY 1 cut(s) 2448
BstHHI GCGC 1 cut(s) 2447
BstMWI GCNNNNNNNGC 5 cut(s) 21, 533, 1085, 1303, 2424
BstNI CCWGG 6 cut(s) 83, 361, 573, 2147, 3928, 4023
BstNSI RCATGY 5 cut(s) 527, 1083, 1187, 1637, 1885
BstPAI GACNNNNGTC 1 cut(s) 3648
BstSCI CCNGG 6 cut(s) 81, 359, 571, 2145, 3926, 4021
BstSFI CTRYAG 5 cut(s) 2058, 2535, 2553, 2860, 3309
BstUI CGCG 2 cut(s) 72, 2949
BstV1I GCAGC 5 cut(s) 259, 1399, 1750, 1797, 2990
BstX2I RGATCY 5 cut(s) 2338, 3313, 3485, 3557, 3724
BstXI CCANNNNNNTGG 1 cut(s) 1522
BstYI RGATCY 5 cut(s) 2338, 3313, 3485, 3557, 3724
BstZ17I GTATAC 1 cut(s) 3149
BsuI GTATCC 4 cut(s) 2128, 2566, 2659, 3625
BtgI CCRYGG 7 cut(s) 1060, 1854, 2947, 3103, 3464, 3646, 4091
BtgZI GCGATG 1 cut(s) 4095
BtrI CACGTC 2 cut(s) 11, 2924
BtsI GCAGTG 1 cut(s) 1346
BtsIMutI CAGTG 6 cut(s) 148, 1027, 1346, 1572, 1981, 3889
BveI ACCTGC 2 cut(s) 374, 3752
Cac8I GCNNGC 8 cut(s) 99, 118, 299, 867, 1077, 1295, 2384, 4019
CfoI GCGC 1 cut(s) 2447
Cfr10I RCCGGY 1 cut(s) 97
Cfr42I CCGCGG 1 cut(s) 2950
CseI GACGC 1 cut(s) 3056
Csp6I GTAC 9 cut(s) 181, 479, 882, 2028, 2606, 2881, 3007, 3330, 3861
CspCI CAANNNNNGTGG 2 cut(s) 2157, 2192
CviQI GTAC 9 cut(s) 181, 479, 882, 2028, 2606, 2881, 3007, 3330, 3861
DraI TTTAAA 1 cut(s) 2718
DrdI GACNNNNNNGTC 1 cut(s) 1276
DseDI GACNNNNNNGTC 1 cut(s) 1276
EaeI YGGCCR 2 cut(s) 99, 3100
Eam1104I CTCTTC 7 cut(s) 330, 583, 852, 1323, 2477, 2773, 4124
EarI CTCTTC 7 cut(s) 330, 583, 852, 1323, 2477, 2773, 4124
EciI GGCGGA 2 cut(s) 3597, 3755
Ecl136II GAGCTC 2 cut(s) 2155, 2418
Eco130I CCWWGG 6 cut(s) 1060, 1424, 2545, 3464, 3646, 4091
Eco147I AGGCCT 2 cut(s) 3871, 3931
Eco24I GRGCYC 2 cut(s) 2157, 2420
Eco31I GGTCTC 6 cut(s) 155, 415, 772, 2730, 3171, 3636
Eco32I GATATC 2 cut(s) 1695, 4117
Eco47III AGCGCT 1 cut(s) 2446
Eco53kI GAGCTC 2 cut(s) 2155, 2418
Eco57I CTGAAG 6 cut(s) 462, 675, 807, 1671, 3066, 3234
Eco88I CYCGRG 3 cut(s) 166, 2826, 3729
EcoICRI GAGCTC 2 cut(s) 2155, 2418
EcoO109I RGGNCCY 6 cut(s) 64, 2228, 3179, 3384, 3770, 3851
EcoRI GAATTC 1 cut(s) 2902
EcoRII CCWGG 6 cut(s) 81, 359, 571, 2145, 3926, 4021
EcoRV GATATC 2 cut(s) 1695, 4117
EcoT14I CCWWGG 6 cut(s) 1060, 1424, 2545, 3464, 3646, 4091
EcoT22I ATGCAT 4 cut(s) 825, 1120, 3236, 3780
EcoT38I GRGCYC 2 cut(s) 2157, 2420
ErhI CCWWGG 6 cut(s) 1060, 1424, 2545, 3464, 3646, 4091
Esp3I CGTCTC 2 cut(s) 3154, 3838
FaqI GGGAC 6 cut(s) 1194, 1539, 2241, 3192, 3583, 3864
FauI CCCGC 1 cut(s) 2942
FauNDI CATATG 1 cut(s) 3343
FbaI TGATCA 2 cut(s) 1939, 2470
FblI GTMKAC 3 cut(s) 512, 1730, 3148
Fnu4HI GCNGC 6 cut(s) 273, 320, 1413, 1739, 1811, 2979
FriOI GRGCYC 2 cut(s) 2157, 2420
Fsp4HI GCNGC 6 cut(s) 273, 320, 1413, 1739, 1811, 2979
GlaI GCGC 1 cut(s) 2446
GluI GCNGC 6 cut(s) 273, 320, 1413, 1739, 1811, 2979
HaeII RGCGCY 1 cut(s) 2448
HapII CCGG 5 cut(s) 98, 1649, 2692, 3582, 3937
HgaI GACGC 1 cut(s) 3056
HhaI GCGC 1 cut(s) 2447
Hin6I GCGC 1 cut(s) 2445
HinP1I GCGC 1 cut(s) 2445
HincII GTYRAC 5 cut(s) 513, 1731, 1761, 2851, 3910
HindII GTYRAC 5 cut(s) 513, 1731, 1761, 2851, 3910
HindIII AAGCTT 5 cut(s) 295, 305, 1821, 3116, 3281
HpaI GTTAAC 1 cut(s) 3910
HpaII CCGG 5 cut(s) 98, 1649, 2692, 3582, 3937
HphI GGTGA 9 cut(s) 82, 423, 950, 2660, 2849, 3251, 3851, 3905, 3965
Hpy166II GTNNAC 9 cut(s) 181, 513, 1588, 1731, 1761, 1876, 2851, 3149, 3910
Hpy8I GTNNAC 9 cut(s) 181, 513, 1588, 1731, 1761, 1876, 2851, 3149, 3910
Hpy99I CGWCG 1 cut(s) 111
HpyCH4IV ACGT 4 cut(s) 10, 910, 2843, 2923
HpyF10VI GCNNNNNNNGC 5 cut(s) 21, 533, 1085, 1303, 2424
HpySE526I ACGT 4 cut(s) 10, 910, 2843, 2923
HspAI GCGC 1 cut(s) 2445
Kpn2I TCCGGA 1 cut(s) 1648
KroI GCCGGC 1 cut(s) 97
KroNI GCCGGC 1 cut(s) 99
Ksp22I TGATCA 2 cut(s) 1939, 2470
KspAI GTTAAC 1 cut(s) 3910
KspI CCGCGG 1 cut(s) 2950
LmnI GCTCC 8 cut(s) 44, 574, 796, 1580, 2524, 2688, 2983, 4077
Lsp1109I GCAGC 5 cut(s) 259, 1399, 1750, 1797, 2990
LweI GCATC 6 cut(s) 852, 1105, 1129, 2402, 2497, 3221
MaeII ACGT 4 cut(s) 10, 910, 2843, 2923
MfeI CAATTG 1 cut(s) 1197
MflI RGATCY 5 cut(s) 2338, 3313, 3485, 3557, 3724
MhlI GDGCHC 3 cut(s) 1069, 2157, 2420
MmeI TCCRAC 3 cut(s) 584, 1558, 1645
Mph1103I ATGCAT 4 cut(s) 825, 1120, 3236, 3780
MroI TCCGGA 1 cut(s) 1648
MroNI GCCGGC 1 cut(s) 97
MroXI GAANNNNTTC 2 cut(s) 3118, 3451
MslI CAYNNNNRTG 2 cut(s) 528, 3027
MspA1I CMGCKG 3 cut(s) 2686, 2949, 2981
MspI CCGG 5 cut(s) 98, 1649, 2692, 3582, 3937
MspR9I CCNGG 6 cut(s) 83, 361, 573, 2147, 3928, 4023
MunI CAATTG 1 cut(s) 1197
Mva1269I GAATGC 2 cut(s) 3666, 3778
MvaI CCWGG 6 cut(s) 83, 361, 573, 2147, 3928, 4023
MvnI CGCG 2 cut(s) 72, 2949
MwoI GCNNNNNNNGC 5 cut(s) 21, 533, 1085, 1303, 2424
NaeI GCCGGC 1 cut(s) 99
NcoI CCATGG 4 cut(s) 1060, 3464, 3646, 4091
NdeI CATATG 1 cut(s) 3343
NgoMIV GCCGGC 1 cut(s) 97
NmuCI GTSAC 5 cut(s) 956, 1250, 1765, 2449, 2530
NsiI ATGCAT 4 cut(s) 825, 1120, 3236, 3780
NspI RCATGY 5 cut(s) 527, 1083, 1187, 1637, 1885
PaeR7I CTCGAG 2 cut(s) 2826, 3729
PaqCI CACCTGC 2 cut(s) 374, 3752
PceI AGGCCT 2 cut(s) 3871, 3931
PciI ACATGT 1 cut(s) 1633
PcsI WCGNNNNNNNCGW 2 cut(s) 2109, 3054
PctI GAATGC 2 cut(s) 3666, 3778
PdiI GCCGGC 1 cut(s) 99
PdmI GAANNNNTTC 2 cut(s) 3118, 3451
PflFI GACNNNGTC 1 cut(s) 1726
PfoI TCCNGGA 1 cut(s) 2145
PkrI GCNGC 6 cut(s) 274, 321, 1414, 1740, 1812, 2980
PpuMI RGGWCCY 5 cut(s) 64, 2228, 3179, 3384, 3851
PscI ACATGT 1 cut(s) 1633
PshAI GACNNNNGTC 1 cut(s) 3648
PsiI TTATAA 4 cut(s) 2699, 2994, 3072, 3879
Psp124BI GAGCTC 2 cut(s) 2157, 2420
Psp5II RGGWCCY 5 cut(s) 64, 2228, 3179, 3384, 3851
Psp6I CCWGG 6 cut(s) 81, 359, 571, 2145, 3926, 4021
PspGI CCWGG 6 cut(s) 81, 359, 571, 2145, 3926, 4021
PspPPI RGGWCCY 5 cut(s) 64, 2228, 3179, 3384, 3851
PspXI VCTCGAGB 1 cut(s) 2826
PstI CTGCAG 1 cut(s) 2557
PsuI RGATCY 5 cut(s) 2338, 3313, 3485, 3557, 3724
PsyI GACNNNGTC 1 cut(s) 1726
RsaI GTAC 9 cut(s) 182, 480, 883, 2029, 2607, 2882, 3008, 3331, 3862
RsaNI GTAC 9 cut(s) 181, 479, 882, 2028, 2606, 2881, 3007, 3330, 3861
RseI CAYNNNNRTG 2 cut(s) 528, 3027
SacI GAGCTC 2 cut(s) 2157, 2420
SacII CCGCGG 1 cut(s) 2950
SalI GTCGAC 2 cut(s) 511, 1729
SatI GCNGC 6 cut(s) 273, 320, 1413, 1739, 1811, 2979
ScrFI CCNGG 6 cut(s) 83, 361, 573, 2147, 3928, 4023
SduI GDGCHC 3 cut(s) 1069, 2157, 2420
SfaNI GCATC 6 cut(s) 852, 1105, 1129, 2402, 2497, 3221
SfcI CTRYAG 5 cut(s) 2058, 2535, 2553, 2860, 3309
Sfr274I CTCGAG 2 cut(s) 2826, 3729
Sfr303I CCGCGG 1 cut(s) 2950
SgrBI CCGCGG 1 cut(s) 2950
SlaI CTCGAG 2 cut(s) 2826, 3729
SmiMI CAYNNNNRTG 2 cut(s) 528, 3027
SmlI CTYRAG 3 cut(s) 2826, 3154, 3729
SmoI CTYRAG 3 cut(s) 2826, 3154, 3729
SpeI ACTAGT 1 cut(s) 539
SseBI AGGCCT 2 cut(s) 3871, 3931
SsiI CCGC 8 cut(s) 70, 320, 2686, 2947, 2949, 2981, 3608, 3740
SspI AATATT 3 cut(s) 291, 1537, 2347
SstI GAGCTC 2 cut(s) 2157, 2420
StuI AGGCCT 2 cut(s) 3871, 3931
StyD4I CCNGG 6 cut(s) 81, 359, 571, 2145, 3926, 4021
StyI CCWWGG 6 cut(s) 1060, 1424, 2545, 3464, 3646, 4091
TaiI ACGT 4 cut(s) 13, 913, 2846, 2926
TaqII GACCGA 1 cut(s) 2880
TatI WGTACW 3 cut(s) 180, 478, 2605
TauI GCSGC 1 cut(s) 322
TscAI CASTG 6 cut(s) 148, 1027, 1353, 1579, 1981, 3889
TseFI GTSAC 5 cut(s) 956, 1250, 1765, 2449, 2530
TseI GCWGC 5 cut(s) 272, 1412, 1738, 1810, 2978
Tsp45I GTSAC 5 cut(s) 956, 1250, 1765, 2449, 2530
TspGWI ACGGA 3 cut(s) 1059, 1843, 3848
TspRI CASTG 6 cut(s) 148, 1027, 1353, 1579, 1981, 3889
Tth111I GACNNNGTC 1 cut(s) 1726
XbaI TCTAGA 1 cut(s) 2906
XceI RCATGY 5 cut(s) 527, 1083, 1187, 1637, 1885
XcmI CCANNNNNNNNNTGG 2 cut(s) 109, 1116
XhoI CTCGAG 2 cut(s) 2826, 3729
XmaJI CCTAGG 1 cut(s) 1424
XmiI GTMKAC 3 cut(s) 512, 1730, 3148
XmnI GAANNNNTTC 2 cut(s) 3118, 3451
Zsp2I ATGCAT 4 cut(s) 825, 1120, 3236, 3780
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.