RLG00000027451

Leukocyte receptor cluster

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0006019
Physical Location & Seq
Reverse (-)
11808791 .. 11824238
15448 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000027451

Sequence Viewer

Length: 7035 bp
ATGCCGCTATCAGGAAATGAAGAGACTGGGGTTAAACCCGTTACCTGGAAATCTAGTGATTATATTGCAGGTGTTCCTATCAAGAAAAGGAGGTTCCCAATGATGAGACCTCCTTCACCCCCACCTGAAGAACCATCTTTTCCCCCTTCAAAAATGTATTCAGTACAGAAGGAAGAACCTAGCCAATCTCAGGGGTCGACTATTTCACATGCTAGTGTTGCAACTAGTTCCGGAATTTCTGATCCAACCAAAGCTCCTGGGTCTGATGATAGAAGAGGAAGCTCTGATGTTAAAAATGTTAATATGGTCCAAGGGAATGATAATACCGTTAGAGTCAAAGTTGAACAGCCTAGCCTTAGAGATCATTTGGGTTCTTCAGATGACTTGCAGAGGAAAGGGAAGTTTGTGATGGCTGATAATCCTGCACCCCAGATGACTTTAGGGAGAAATGAGTTGAATTTGAGACCAACTGAAGCTCCTGTATCTAGTTTAAGTAAGGATATTATGCATAGCAAACACAGAGCGGAAATAAAATGTAAAGAAGAGATGCCTGCTATTGCTGAGGGTACTGAATTATCATTAGCTTACAAGGAACGTCTTTTTCCATCTTTGACAGGCCAAAAGAGTGATAGTGGTGTGAGTCACCCTCCTAGTCAGGATAAGTCAGAACCTATTTCCCTGAATTTGTCTTTAAGTAAAGAGAAAATCAGTGGTCAATGCAATAGTAAGGACGGAGATTTGAAAGTCCATGGTGCTCAGTTGCAAGCATGTAGAGCACACTGGGATTTGAATACACCAATGGATGCATGGGGAGATTCTGTTAATGATGCTCCAGTATCTGTTGATCGGATCAATGCAAAAGGTGGGGGACATGCTGTTAGCTCAATTGGGATGGTTGAAGGTGGTGTTAGCTCAGAAAGACAGAGTAATGTTGAGAGTCACAAAAGAACTAATTTGACCATGTTGTCCAAACTAGATAGCCAGCAATATAAGCCCAATGATTCTCTTATTTTACGCCTTAGTTCTTCTTGCTCACTGCCAAACCTGTGTCAAACACCTAGTTCATCCATTGCATTTGAGTTTGATAGGAGGACTTCTGCTGCAAACTTGCCTAGGGTGGCAGGGCCAACTAGCAATCTGAACTTGGGTAATCATAGAACCGTGAAACCAGAGCCGTTTGATGAGAGAGTCAAACAGGAACCCAGTAGTATGGGACCATTGAATATTAGAGCAGGGAAGCATGGAGTAGTTGAGCGTTCCACTGTTGGAGCTGTTCACTCCTCAAATGTTAGCACCCAAAAATTTGTTGATCCTAGATCCATAAAATCTGAACCAGCTCTTGAGCTTAATCAAGAGACGAGCAGGTCTGCCAAAGGGAAATCAGTCCAACTGGACAAACATGTGATAAATGGTCTGGATGATCGTCCTTTTGACATGAAATTGTCTGTTGCTTCAGAGATATCTCGCTCTGCTGGAAAGCCTTCTTGTTTGACAGAGTCGACTGGGCAGCCTTCTTGTTCAACAGAGTTGACTGTGACTCAGGATGTGACAAACCATTCAGGAGACTCTAATGTAAGGCTGCCTCACGAAGCTTGTCAAAGCAATGAGAAAGTTGCTATATCCCTGGGCCATGATAGTAAGGTAAACAACATGCAAACTAAAGATGACAATGTTGACAGTCAGAGTTGTAAATTGAAATTGATGATTGATCAACCCCTTGATTCTCGTGGAAGTGGCGGAACCAGTGATGAGGAAAAGATAAATATATCAACAGATATTCCGGAAGATTCTTATGGTACTGATTATGAATCAGATGGTAATCATGCTATAGATACAGCTGTTGAGACTAAAGAAGGTAAAGATGATGACTATGAAGATGGCGAGGTCAGAGATTTACTTCTGGATACAGCAGTCCAGGATGAGCTCATAAGTGAGTCAAGAGAAGTGGAAAATGCCAACCATGATGATTTTGATAATGGAAGGACAGAGTGTGTGGGACCTGTTGATATTGTTCATCATACTTCATTCCACGTTGAGGCAGAAGACAACAAAACAGACAATCTTGCTGGAACAAGTAACAATGATCATGAAGAATCTGCTGATATAGATCTTAATATTGAATCTGACAAGGGCTGTGATAATGATGTGTGCTTGCAAGAAGCATCGTTTGTTGAAAAGCTAACGAGCTCTGAGGGCATGAAAGGGTCCATCAGCGCTGTGACAATAGAACCACTCAATGATCAATCTGGGAAGAGAGATTCCCAGAAGTGTCAGGATGCAGAGTTATCCTCGGAGCAAGTCACTATAGGAAGCCGAGGAACTGCAGTAGCTATTGCTCAGGATACTGAGCTGAATGTTAATAAAACTGAACCTGTACTGACGAGTGATTCAACTTTGTCCAAAACTTCTGGTAGTGGTGATAATGCGACTAAGGATACCAGTAATGGAGGACAGCGGAGCCGGATTATAACTTTGCCTCGATCTTTAAATGGGTCTCCTACTAGATCAAGATCAATTCCAGACCAGCCATTTCCATCAAGAGCTGGAAGAGAAATTTTACCTGATGTAACACCAGATGACGATAAACTACATCCTCGAGGGAGAGGTGAAACGTATGTTGACGATCCCTACAGATTTTCAAGGGAGCAGTACCAAGATCGGTCATGGAGGAATTCTAGAGTGAATTTTAGACGTGGTAGAGGGAGGATGAATAACCGTGGGGATTGGAGTTCTGATCGTTACTTTGCAGCGGAGCGTTATTATAATCAAACAAAGTACCGTGTTCCAAGACATAAATATGTAAATGTCATTTCTGACGCTGACCTCGAATATAATAATTATAATATGGCTTCAGATGGTGCATTTGTTGGCCGTGGAGGGAGGAAGCTTTCAAATGATGGACCAATTAACCACCGTATACCCTCAAGGAGACGGTCTCCTGTTGGGGGACCTATAATTCATGTGCCTCGCAGAAATCCCAGAAATTTTAGTCCAAGTAGATGCATTGGTGAAGATACTTCAGATTTGGTTGGCATGAGGCATAATGAGAAGCTTATGAGAGGCTTTCCTGATGATACTGTAGATTCCATGTTCAATCGTACCCAACCTTCATATGAGGGAGATGGTCAGTTTGGACGAGGGCGAGGAAATAGGACCTTTTCTTTTGTTCAGCAAAGAGGTATTCGAGTTCGTTCAAAGTCTCCAATAAGGACCAGAACTCGTTCTCCTGTGCCATGGTCATCTCCTAGAAGAAGATCCCCCGATGGATTTGGTGGGCCTGGAGAATTGAGCCATCGAACACCAAATTACAGGATGGAGAGGTTTAGATCCCCTGATGGGGCATCTTTTACCGGAGAAATGGTGGTCAGAAGAAATCCGCCAAATGATTTGAGGGATATGGATACTGTAAGAGACCATGGTCATCAAAGGTCTGGCATTCATAGGGGTCCTTCTTCCCGTGTTTTACTCAGAAACAGGAGATTTGATGTCATAGATCCTCGAGAAAGGGCGGACAATAATGAGTTCTTTGCAGGTGGGGGGCCTATGCATTCTGGTCGGTTGCATGAGCTTGGTGGGGATGGAAATGCTGATGATAGGAGAAGGTTTGGTGAGAGACGGGGACCTGTCCGTACATTTAGGCCTCCTTATAACAGTGCTGATGGTGAGACATTTCATGTTAACACAGAGGATGGCCCTAGGCCTTTCCGGTTCTGCCCAGATGGTGAAACCGAGTTTCAAGAAAGAGGCAATTTGAGAGAGAGAGATTTTGACAGAAGGATAAAGAACAGGCCAGGAAATGCACCTAGAAGAATCAGAAGCATTGAAGATCAGGAAGGAAATTTCAGGAGCGATGGACAGCCATGGAATGATGGTGGTTTTGATGATATCTCACGGGCGAAGAGAAAAAGTCAAAAATTTCATCCCCAATTTGCTTCCGATCCCATTAATCGCGTTCGCCAAAAGTCAAACAACTACAATCACAGCGCTTCTGATTTGAAGGATGTTAAAAAGATGATGATGAATCAAGGAGGCAATGCTCAGACCATTGCTGCTGTCGACCCCAATTCGCTTGAGAATCGCCATGTAGTTAATGGGAACCAAGGACAGACGTCGTCATATTTTCCATCAACAACTGGGTCGGAAGCGTCGGCATGGCCAACTCATCGGGTGGAGAATAGCTCCACGGAAAATGGGATTCATTCTCATTCGGCTTATCAATATAATCAGCATACACAACCACCTGCGAGTAGCTCGTCCAGTTTGGGAACAGTGAATGCACCACAAGATTACAGTACCTATGCGTCATACCCAAATCCTGCTGATCCATATGGTTATGGAAGTGCGGGATACCAAGGTTACTATAACAACTATCAGCAGCAACCCAACCAGTCCTACTCACAACCCGTAGGAGCATATCAAAATACAGGTGCTCCTTATCAGCCTATTTCCTCATTTCAGAATACTGGGTCTTATGCTGGGTCTGCAAGTTATTCAAGCACTTACTACAATCCTGCTGATTATCAGACTGCTGGAGGCTACGCAAGTAGCGGTTACACTAACCAGACTAATCAGACCACTGCTTGGAATGGTGGAAATTATGCAAACTATACCTCTCAACAATATGCACCCTATACTCCAGAAACTCCTGGTGTATATAGTTCTGCTACTGCAACTTCAACCCCACAAAATTATCAGCAGCATTATAAGCAATGGGCAGATTATTACAATCAAACGGAAGTCAGTTGTGCTCCTGGGACTGAGAACTTATCTGTTACTAATACACAGAATGTAGGATGTCCCGTTCCAGGTGTTACCACTGGGTATCAAACCTCAAACAGCCAGCCACCACCTTCATACACTCCTGCATGGAGGCCAGAATCTAGTTCATCTGAATTACCATCGGTGCAGTCTGGTGCTGTAGTTGGTGGTGCTCATGATGCTTACTGGAATCATGTGGCTCCTACTTCGCAATCTCAAATTCAACATATTTCTCTGATTCAAGCACAATTTCAAAAGCCTTTGGATCAAAAAACTTCTTATGATAGCTTTCAGGACCAACAAAAAACTGCAACTTCTCAAGCATCAAGCATTCAGTATCCTGCTTCTCAGCAGCTGCCATATGTGTCTCAAAGTTACCAAACACCTTCACAAGCTGTTCCATCTATAGATACACAAAGAGTAAACAAACTGCAGATTCCAACGAACCCTAGAATCACTTCAAATATGACTTTGGGTTTACGAAAAACTGACAAGGATATAAATACAACCAGTCCAGCAGGAAAACCTGCTTACATCAGTGTTTCACTGCCAAAACCGGTTGAGAAGGTGCCATCCAGTGCTAGTGCTGATTCTCTGCTTAAGACTGGTATGTTCCCTAAGTCACTGCGTGGTTATGTTGAAAGGGCTTTGGCTCGCTGTAAAGATGATAGCCAGATGGCTGCCTGTCAGGTTGTCATGAAGGAGATCATCACCAAGGCAACAGCTGATGGCACACTTTACACACGAGACTGGGATACTGAGCCTCTTTTCCCCCTCCCAAATGAAGATGCTACAAATAAAGAGTTAAATTCTTCAAACCTTGTTTCATCATTGGCAAAGTTTAAAAGAAGTCCAAGTAGGCGATCCAAGAGTAGATGGGAACCTTTACCAGAGGAGAAGTCAGAGAAGTCCATCGAAAGGCCAGCCTCTTTAAATAGCAGTGGTCTAAACTATGCTGCTTGGGGACATGTCAATGATAAGGAGAGAAAGCCATTGTTGTGGAGTGCTGGGAGTAAGTATGATAATATGAGTAGTGCAAAGTTTCCTTCACTGGAGCAGAAAAGTGCAAGTAAGATAACCCAAAAGCCATTTAAGAGGCAGCGCCTTTCTGATGGGGTAGGTGCTACTGAGAATGGTGATGCATCTAGTGATAGTGATGCAGAACAAGGTTTAGCAGCCTACTACGCGGGAGCAATTGCGCTTGCAGATTCACCAGAGGAAAGAAAGAGACGTGAACATCGCTCTAAGCGTTTTGAAAAAGTGCAAGGACATCGAGGACAAAATAATCACTTCAAACCTAAAAATGCTGGTGCTGGAAACTTGTATAATAGAAGAGCGAATGCCTTGGTGCTCAGCAAAAATTTTGAAGATGGCGCTAGCAGGGCTGTTGAAGACATTGACTGGGATTCTCTTACTGTCAAGGGGACCTGCCAAGAAATTGAGAAACGTTATTTGCGCCTTACTTCTGCACCTGATCCTGCCACTGTTAGGCCGGAGGATGTTCTTGAAAAAGCTTTGCTTATGGTACAAAATTCTCAGAAGAATTACCTATATAAATGCGATCAGCTGAAGTCCATTCGCCAGGATTTGACTGTGCAACGAATTCAAAATCAGCTAACAGTAAAGGTGTATGAAACTCATGCTCGGTTAGCATTGGAAGTTGGAGACCTGCCAGAATATAATCAGTGCCAGTCACAGTTGAAATCGCTCTATGCTGATGGTATTGAGGGATGTCATATGGAGTTTTCTGCGTACAACTTGCTTTGTGTTATCCTGCACTCAAATAATAACAGAGATTTGTTATCATCAATGGCAAGCTTGTCAGATGAAACAAAAAAGCATGAGGCTGTGAAACATGCTCTTGCAGTTCGAGCTGCCGTCACTTCGGGAAATTATGTCATGTTCTTCAGGCTCTACAAAACAGCTCCCAACTTAAGCACCTGCCTTATGGATCTTTATGTTGAAAAGATGCGGTTTAAGGCAGTGAGCTGCATGTGCCGATCATATCGGCCCACAATACCTGTTTCATATGTTGCTCAAATTCTGGGGTTTACACCCACAAATGAGGAAAGTGGGGAGAAGGATTCAGAGGGATTGGAGGAATGCATTGAATGGTTGAAACTACATGGTGCATGCCTTGCTGCAGATAACAATGGGGAAATGCAGCTTGATGCAAAGTCTACTTCTTCTAGTCTTTATATGCCAGAGACTGATGCTGTGTCCCATGGAGATGCCAATCTCGCTGTTAATGATTTTTTTACACGGACACCTTCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
SAC3_GANP

Protein Analysis

2345

Amino Acids

259.06

Weight (kDa)

6.68

Isoelectric Point (pI)

51.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SAC3_GANP PF03399 2069 - 2274 4.2e-25 SAC3/GANP family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 5 cut(s) 2468, 2763, 2841, 3648, 4704
AarI CACCTGC 4 cut(s) 59, 3521, 4249, 6707
AasI GACNNNNNNGTC 2 cut(s) 964, 1363
AatII GACGTC 1 cut(s) 4112
AbsI CCTCGAGG 1 cut(s) 2595
Acc36I ACCTGC 8 cut(s) 59, 1353, 3521, 4249, 5293, 6194, 6435, 6707
AccB1I GGYRCC 1 cut(s) 5326
AccB7I CCANNNNNTGG 1 cut(s) 4581
AccBSI CCGCTC 1 cut(s) 524
AccI GTMKAC 5 cut(s) 197, 1499, 2917, 4056, 6938
AccII CGCG 2 cut(s) 3951, 5945
AccIII TCCGGA 2 cut(s) 230, 1780
AclI AACGTT 1 cut(s) 6205
AcoI YGGCCR 2 cut(s) 2869, 4154
AcuI CTGAAG 8 cut(s) 147, 360, 492, 1437, 2835, 3003, 6347, 6649
AcyI GRCGYC 1 cut(s) 4109
AdeI CACNNNGTG 1 cut(s) 5387
AfeI AGCGCT 2 cut(s) 2215, 3985
AflII CTTAAG 2 cut(s) 5357, 6691
AflIII ACRYGT 2 cut(s) 1399, 5725
AgeI ACCGGT 1 cut(s) 5314
AhlI ACTAGT 1 cut(s) 224
AjiI CACGTC 2 cut(s) 2693, 5990
AloI GAACNNNNNNTCC 4 cut(s) 3208, 3240, 4785, 4817
Alw21I GWGCWC 8 cut(s) 757, 778, 1926, 2189, 4432, 4750, 4933, 6111
AlwNI CAGNNNCTG 3 cut(s) 839, 5113, 6968
Ama87I CYCGRG 2 cut(s) 2595, 3498
Aor13HI TCCGGA 2 cut(s) 230, 1780
Aor51HI AGCGCT 2 cut(s) 2215, 3985
AseI ATTAAT 1 cut(s) 3945
AsiGI ACCGGT 1 cut(s) 5314
Asp700I GAANNNNTTC 3 cut(s) 1480, 3220, 5215
AspA2I CCTAGG 2 cut(s) 1112, 3695
AspLEI GCGC 6 cut(s) 2216, 3986, 5862, 5959, 6134, 6216
AsuNHI GCTAGC 1 cut(s) 6134
AvaI CYCGRG 2 cut(s) 2595, 3498
AvrII CCTAGG 2 cut(s) 1112, 3695
BaeI ACNNNNGTAYC 6 cut(s) 1824, 1857, 1896, 1929, 4339, 4372
BalI TGGCCA 1 cut(s) 4156
BanI GGYRCC 1 cut(s) 5326
BanII GRGCYC 2 cut(s) 1926, 2189
BarI GAAGNNNNNNTAC 2 cut(s) 3091, 3123
BauI CACGAG 2 cut(s) 1725, 5502
BbsI GAAGAC 2 cut(s) 2049, 6156
Bbv12I GWGCWC 8 cut(s) 757, 778, 1926, 2189, 4432, 4750, 4933, 6111
BbvCI CCTCAGC 1 cut(s) 561
BceAI ACGGC 3 cut(s) 1159, 2856, 6620
BcgI CGANNNNNNTGC 4 cut(s) 3536, 3570, 6011, 6045
BciVI GTATCC 7 cut(s) 1897, 2335, 2428, 3394, 4340, 5106, 5506
BclI TGATCA 3 cut(s) 1708, 2083, 2239
BcuI ACTAGT 1 cut(s) 224
BfmI CTRYAG 9 cut(s) 1827, 2304, 2322, 2629, 3078, 4917, 5163, 5189, 6900
BfoI RGCGCY 4 cut(s) 2217, 3987, 5863, 6135
BfrI CTTAAG 2 cut(s) 5357, 6691
BfuAI ACCTGC 8 cut(s) 59, 1353, 3521, 4249, 5293, 6194, 6435, 6707
BfuI GTATCC 7 cut(s) 1897, 2335, 2428, 3394, 4340, 5106, 5506
BglII AGATCT 1 cut(s) 2107
BlnI CCTAGG 2 cut(s) 1112, 3695
BlpI GCTNAGC 1 cut(s) 6110
BmeT110I CYCGRG 2 cut(s) 2595, 3498
BmgBI CACGTC 2 cut(s) 2693, 5990
BmrI ACTGGG 9 cut(s) 36, 790, 1197, 1512, 4143, 4473, 4827, 5518, 6169
BmtI GCTAGC 1 cut(s) 6138
BmuI ACTGGG 9 cut(s) 36, 790, 1197, 1512, 4143, 4473, 4827, 5518, 6169
BoxI GACNNNNGTC 2 cut(s) 3417, 4108
BpiI GAAGAC 2 cut(s) 2049, 6156
BplI GAGNNNNNCTC 8 cut(s) 631, 663, 2273, 2305, 2920, 2952, 4163, 4195
BpmI CTGGAG 5 cut(s) 816, 3300, 4551, 4620, 5831
Bpu10I CCTNAGC 2 cut(s) 561, 2337
Bpu1102I GCTNAGC 1 cut(s) 6110
BpuEI CTTGAG 4 cut(s) 1361, 2908, 4091, 5061
BsaBI GATNNNNATC 4 cut(s) 1818, 2106, 2509, 6993
BsaHI GRCGYC 1 cut(s) 4109
BsaI GGTCTC 6 cut(s) 100, 457, 2499, 2940, 3405, 6417
BsaWI WCCGGW 5 cut(s) 230, 1780, 3350, 3705, 5314
Bse118I RCCGGY 1 cut(s) 5314
Bse3DI GCAATG 5 cut(s) 1068, 1609, 4039, 4044, 4715
Bse8I GATNNNNATC 4 cut(s) 1818, 2106, 2509, 6993
BseAI TCCGGA 2 cut(s) 230, 1780
BseJI GATNNNNATC 4 cut(s) 1818, 2106, 2509, 6993
BseMI GCAATG 5 cut(s) 1068, 1609, 4039, 4044, 4715
BseRI GAGGAG 2 cut(s) 1270, 5666
BseYI CCCAGC 2 cut(s) 4475, 5765
BsgI GTGCAG 4 cut(s) 408, 4925, 6210, 6518
Bsh1236I CGCG 2 cut(s) 3951, 5945
BshNI GGYRCC 1 cut(s) 5326
BshTI ACCGGT 1 cut(s) 5314
BsiHKAI GWGCWC 8 cut(s) 757, 778, 1926, 2189, 4432, 4750, 4933, 6111
BsiHKCI CYCGRG 2 cut(s) 2595, 3498
BsiSI CCGG 7 cut(s) 231, 1781, 2461, 3351, 3706, 5315, 6251
BsmBI CGTCTC 4 cut(s) 1349, 2923, 3607, 5980
BsmI GAATGC 6 cut(s) 3435, 3547, 4279, 5088, 6103, 6866
Bso31I GGTCTC 6 cut(s) 100, 457, 2499, 2940, 3405, 6417
BsoBI CYCGRG 2 cut(s) 2595, 3498
Bsp1286I GDGCHC 8 cut(s) 757, 778, 1926, 2189, 4432, 4750, 4933, 6111
Bsp13I TCCGGA 2 cut(s) 230, 1780
Bsp1720I GCTNAGC 1 cut(s) 6110
Bsp19I CCATGG 5 cut(s) 748, 3233, 3415, 3860, 6982
BspEI TCCGGA 2 cut(s) 230, 1780
BspFNI CGCG 2 cut(s) 3951, 5945
BspHI TCATGA 3 cut(s) 2086, 4933, 5454
BspMAI CTGCAG 3 cut(s) 2326, 5193, 6904
BspMI ACCTGC 8 cut(s) 59, 1353, 3521, 4249, 5293, 6194, 6435, 6707
BspOI GCTAGC 1 cut(s) 6138
BspQI GCTCTTC 1 cut(s) 6085
BspT107I GGYRCC 1 cut(s) 5326
BspTI CTTAAG 2 cut(s) 5357, 6691
BspTNI GGTCTC 6 cut(s) 100, 457, 2499, 2940, 3405, 6417
BsrBI CCGCTC 1 cut(s) 524
BsrDI GCAATG 5 cut(s) 1068, 1609, 4039, 4044, 4715
BsrFI RCCGGY 1 cut(s) 5314
BssAI RCCGGY 1 cut(s) 5314
BssNAI GTATAC 1 cut(s) 2918
BssNI GRCGYC 1 cut(s) 4109
BssSI CACGAG 2 cut(s) 1725, 5502
Bst1107I GTATAC 1 cut(s) 2918
Bst2BI CACGAG 2 cut(s) 1725, 5502
Bst6I CTCTTC 7 cut(s) 15, 268, 537, 2246, 2542, 3893, 6085
BstACI GRCGYC 1 cut(s) 4109
BstAFI CTTAAG 2 cut(s) 5357, 6691
BstAPI GCANNNNNTGC 1 cut(s) 6896
BstDSI CCRYGG 8 cut(s) 748, 2716, 2872, 3233, 3415, 3860, 4182, 6982
BstFNI CGCG 2 cut(s) 3951, 5945
BstH2I RGCGCY 4 cut(s) 2217, 3987, 5863, 6135
BstHHI GCGC 6 cut(s) 2216, 3986, 5862, 5959, 6134, 6216
BstNSI RCATGY 9 cut(s) 212, 771, 875, 1403, 1654, 5729, 6617, 6754, 6894
BstPAI GACNNNNGTC 2 cut(s) 3417, 4108
BstSFI CTRYAG 9 cut(s) 1827, 2304, 2322, 2629, 3078, 4917, 5163, 5189, 6900
BstUI CGCG 2 cut(s) 3951, 5945
BstV2I GAAGAC 2 cut(s) 2049, 6156
BstX2I RGATCY 6 cut(s) 1316, 2107, 3254, 3326, 3493, 6709
BstXI CCANNNNNNTGG 2 cut(s) 1210, 5757
BstYI RGATCY 6 cut(s) 1316, 2107, 3254, 3326, 3493, 6709
BstZ17I GTATAC 1 cut(s) 2918
BsuI GTATCC 7 cut(s) 1897, 2335, 2428, 3394, 4340, 5106, 5506
BtgI CCRYGG 8 cut(s) 748, 2716, 2872, 3233, 3415, 3860, 4182, 6982
BtgZI GCGATG 2 cut(s) 3864, 5981
BtrI CACGTC 2 cut(s) 2693, 5990
BtsI GCAGTG 6 cut(s) 1034, 4575, 5303, 5381, 5704, 6747
BveI ACCTGC 8 cut(s) 59, 1353, 3521, 4249, 5293, 6194, 6435, 6707
CaiI CAGNNNCTG 3 cut(s) 839, 5113, 6968
CciI TCATGA 3 cut(s) 2086, 4933, 5454
CfoI GCGC 6 cut(s) 2216, 3986, 5862, 5959, 6134, 6216
Cfr10I RCCGGY 1 cut(s) 5314
CseI GACGC 3 cut(s) 2825, 4134, 4290
CspAI ACCGGT 1 cut(s) 5314
CspCI CAANNNNNGTGG 2 cut(s) 1926, 1961
DraI TTTAAA 3 cut(s) 2487, 5602, 5691
DraIII CACNNNGTG 1 cut(s) 5387
DrdI GACNNNNNNGTC 2 cut(s) 964, 1363
DseDI GACNNNNNNGTC 2 cut(s) 964, 1363
EaeI YGGCCR 2 cut(s) 2869, 4154
Eam1104I CTCTTC 7 cut(s) 15, 268, 537, 2246, 2542, 3893, 6085
EarI CTCTTC 7 cut(s) 15, 268, 537, 2246, 2542, 3893, 6085
EciI GGCGGA 3 cut(s) 1752, 3366, 3524
Ecl136II GAGCTC 2 cut(s) 1924, 2187
Eco147I AGGCCT 2 cut(s) 3640, 3700
Eco24I GRGCYC 2 cut(s) 1926, 2189
Eco31I GGTCTC 6 cut(s) 100, 457, 2499, 2940, 3405, 6417
Eco32I GATATC 2 cut(s) 1461, 3886
Eco47III AGCGCT 2 cut(s) 2215, 3985
Eco53kI GAGCTC 2 cut(s) 1924, 2187
Eco57I CTGAAG 8 cut(s) 147, 360, 492, 1437, 2835, 3003, 6347, 6649
Eco88I CYCGRG 2 cut(s) 2595, 3498
EcoICRI GAGCTC 2 cut(s) 1924, 2187
EcoO109I RGGNCCY 7 cut(s) 1997, 2948, 3153, 3446, 3539, 3620, 6183
EcoRI GAATTC 2 cut(s) 2671, 6360
EcoRV GATATC 2 cut(s) 1461, 3886
EcoT22I ATGCAT 6 cut(s) 510, 808, 3005, 3549, 5902, 6866
EcoT38I GRGCYC 2 cut(s) 1926, 2189
Esp3I CGTCTC 4 cut(s) 1349, 2923, 3607, 5980
FalI AAGNNNNNCTT 2 cut(s) 6261, 6293
FauI CCCGC 2 cut(s) 4336, 5938
FauNDI CATATG 5 cut(s) 3112, 4327, 5119, 6495, 6787
FbaI TGATCA 3 cut(s) 1708, 2083, 2239
FblI GTMKAC 5 cut(s) 197, 1499, 2917, 4056, 6938
FriOI GRGCYC 2 cut(s) 1926, 2189
GlaI GCGC 6 cut(s) 2215, 3985, 5861, 5958, 6133, 6215
GsaI CCCAGC 2 cut(s) 4479, 5769
GsuI CTGGAG 5 cut(s) 816, 3300, 4551, 4620, 5831
HaeII RGCGCY 4 cut(s) 2217, 3987, 5863, 6135
HapII CCGG 7 cut(s) 231, 1781, 2461, 3351, 3706, 5315, 6251
HgaI GACGC 3 cut(s) 2825, 4134, 4290
HhaI GCGC 6 cut(s) 2216, 3986, 5862, 5959, 6134, 6216
Hin1I GRCGYC 1 cut(s) 4109
Hin6I GCGC 6 cut(s) 2214, 3984, 5860, 5957, 6132, 6214
HinP1I GCGC 6 cut(s) 2214, 3984, 5860, 5957, 6132, 6214
HincII GTYRAC 7 cut(s) 198, 1500, 1530, 1675, 2620, 3679, 4057
HindII GTYRAC 7 cut(s) 198, 1500, 1530, 1675, 2620, 3679, 4057
HindIII AAGCTT 5 cut(s) 1590, 2885, 3050, 6270, 6574
HpaI GTTAAC 1 cut(s) 3679
HpaII CCGG 7 cut(s) 231, 1781, 2461, 3351, 3706, 5315, 6251
Hpy99I CGWCG 2 cut(s) 4114, 4150
HpyCH4IV ACGT 7 cut(s) 595, 2031, 2612, 2692, 4109, 5989, 6205
HpySE526I ACGT 7 cut(s) 595, 2031, 2612, 2692, 4109, 5989, 6205
Hsp92I GRCGYC 1 cut(s) 4109
HspAI GCGC 6 cut(s) 2214, 3984, 5860, 5957, 6132, 6214
Kpn2I TCCGGA 2 cut(s) 230, 1780
Ksp22I TGATCA 3 cut(s) 1708, 2083, 2239
KspAI GTTAAC 1 cut(s) 3679
LguI GCTCTTC 1 cut(s) 6085
MaeII ACGT 7 cut(s) 595, 2031, 2612, 2692, 4109, 5989, 6205
MbiI CCGCTC 1 cut(s) 524
MfeI CAATTG 2 cut(s) 885, 5952
MflI RGATCY 6 cut(s) 1316, 2107, 3254, 3326, 3493, 6709
MhlI GDGCHC 8 cut(s) 757, 778, 1926, 2189, 4432, 4750, 4933, 6111
MlsI TGGCCA 1 cut(s) 4156
MluNI TGGCCA 1 cut(s) 4156
MlyI GAGTC 8 cut(s) 342, 649, 946, 1197, 1505, 1531, 1559, 1943
MmeI TCCRAC 6 cut(s) 269, 1246, 1411, 4119, 5222, 6400
Mox20I TGGCCA 1 cut(s) 4156
Mph1103I ATGCAT 6 cut(s) 510, 808, 3005, 3549, 5902, 6866
MroI TCCGGA 2 cut(s) 230, 1780
MroXI GAANNNNTTC 3 cut(s) 1480, 3220, 5215
MscI TGGCCA 1 cut(s) 4156
MslI CAYNNNNRTG 5 cut(s) 213, 2796, 5730, 5755, 6987
Msp20I TGGCCA 1 cut(s) 4156
MspA1I CMGCKG 6 cut(s) 1838, 2455, 2750, 5113, 5483, 6325
MspCI CTTAAG 2 cut(s) 5357, 6691
MspI CCGG 7 cut(s) 231, 1781, 2461, 3351, 3706, 5315, 6251
MunI CAATTG 2 cut(s) 885, 5952
Mva1269I GAATGC 6 cut(s) 3435, 3547, 4279, 5088, 6103, 6866
MvnI CGCG 2 cut(s) 3951, 5945
NcoI CCATGG 5 cut(s) 748, 3233, 3415, 3860, 6982
NdeI CATATG 5 cut(s) 3112, 4327, 5119, 6495, 6787
NheI GCTAGC 1 cut(s) 6134
NmeAIII GCCGAG 1 cut(s) 2339
NmuCI GTSAC 9 cut(s) 641, 938, 1534, 1546, 2218, 2299, 5379, 6450, 6637
NsiI ATGCAT 6 cut(s) 510, 808, 3005, 3549, 5902, 6866
NspI RCATGY 9 cut(s) 212, 771, 875, 1403, 1654, 5729, 6617, 6754, 6894
PaeI GCATGC 1 cut(s) 6894
PaeR7I CTCGAG 2 cut(s) 2595, 3498
PagI TCATGA 3 cut(s) 2086, 4933, 5454
PaqCI CACCTGC 4 cut(s) 59, 3521, 4249, 6707
PasI CCCWGGG 1 cut(s) 1624
PceI AGGCCT 2 cut(s) 3640, 3700
PciI ACATGT 2 cut(s) 1399, 5725
PciSI GCTCTTC 1 cut(s) 6085
PcsI WCGNNNNNNNCGW 2 cut(s) 2823, 6004
PctI GAATGC 6 cut(s) 3435, 3547, 4279, 5088, 6103, 6866
PdmI GAANNNNTTC 3 cut(s) 1480, 3220, 5215
PflFI GACNNNGTC 2 cut(s) 1495, 4111
PflMI CCANNNNNTGG 1 cut(s) 4581
PfoI TCCNGGA 1 cut(s) 1914
PinAI ACCGGT 1 cut(s) 5314
PleI GAGTC 8 cut(s) 341, 648, 945, 1196, 1504, 1531, 1559, 1942
PpsI GAGTC 8 cut(s) 341, 648, 945, 1196, 1504, 1531, 1559, 1942
PpuMI RGGWCCY 6 cut(s) 1997, 2948, 3153, 3446, 3620, 6183
PscI ACATGT 2 cut(s) 1399, 5725
PshAI GACNNNNGTC 2 cut(s) 3417, 4108
PshBI ATTAAT 1 cut(s) 3945
PsiI TTATAA 5 cut(s) 2468, 2763, 2841, 3648, 4704
Psp124BI GAGCTC 2 cut(s) 1926, 2189
Psp1406I AACGTT 1 cut(s) 6205
Psp5II RGGWCCY 6 cut(s) 1997, 2948, 3153, 3446, 3620, 6183
PspFI CCCAGC 2 cut(s) 4475, 5765
PspPPI RGGWCCY 6 cut(s) 1997, 2948, 3153, 3446, 3620, 6183
PspXI VCTCGAGB 1 cut(s) 2595
PstI CTGCAG 3 cut(s) 2326, 5193, 6904
PstNI CAGNNNCTG 3 cut(s) 839, 5113, 6968
PsuI RGATCY 6 cut(s) 1316, 2107, 3254, 3326, 3493, 6709
PsyI GACNNNGTC 2 cut(s) 1495, 4111
PvuII CAGCTG 4 cut(s) 1838, 5113, 5483, 6325
RseI CAYNNNNRTG 5 cut(s) 213, 2796, 5730, 5755, 6987
SacI GAGCTC 2 cut(s) 1926, 2189
SalI GTCGAC 3 cut(s) 196, 1498, 4055
SapI GCTCTTC 1 cut(s) 6085
SchI GAGTC 8 cut(s) 342, 649, 946, 1197, 1505, 1531, 1559, 1943
SduI GDGCHC 8 cut(s) 757, 778, 1926, 2189, 4432, 4750, 4933, 6111
SfcI CTRYAG 9 cut(s) 1827, 2304, 2322, 2629, 3078, 4917, 5163, 5189, 6900
Sfr274I CTCGAG 2 cut(s) 2595, 3498
SlaI CTCGAG 2 cut(s) 2595, 3498
SmiMI CAYNNNNRTG 5 cut(s) 213, 2796, 5730, 5755, 6987
SmlI CTYRAG 8 cut(s) 1340, 2595, 2923, 3498, 4070, 5076, 5357, 6691
SmoI CTYRAG 8 cut(s) 1340, 2595, 2923, 3498, 4070, 5076, 5357, 6691
SpeI ACTAGT 1 cut(s) 224
SphI GCATGC 1 cut(s) 6894
SseBI AGGCCT 2 cut(s) 3640, 3700
SspI AATATT 2 cut(s) 1225, 2116
SstI GAGCTC 2 cut(s) 1926, 2189
StuI AGGCCT 2 cut(s) 3640, 3700
TaiI ACGT 7 cut(s) 598, 2034, 2615, 2695, 4112, 5992, 6208
TaqII GACCGA 1 cut(s) 2649
TatI WGTACW 2 cut(s) 163, 2374
TauI GCSGC 1 cut(s) 7
TseFI GTSAC 9 cut(s) 641, 938, 1534, 1546, 2218, 2299, 5379, 6450, 6637
Tsp45I GTSAC 9 cut(s) 641, 938, 1534, 1546, 2218, 2299, 5379, 6450, 6637
TspGWI ACGGA 4 cut(s) 747, 3617, 4199, 4748
Tth111I GACNNNGTC 2 cut(s) 1495, 4111
Van91I CCANNNNNTGG 1 cut(s) 4581
Vha464I CTTAAG 2 cut(s) 5357, 6691
VspI ATTAAT 1 cut(s) 3945
XbaI TCTAGA 1 cut(s) 2675
XceI RCATGY 9 cut(s) 212, 771, 875, 1403, 1654, 5729, 6617, 6754, 6894
XcmI CCANNNNNNNNNTGG 2 cut(s) 804, 4088
XhoI CTCGAG 2 cut(s) 2595, 3498
XmaJI CCTAGG 2 cut(s) 1112, 3695
XmiI GTMKAC 5 cut(s) 197, 1499, 2917, 4056, 6938
XmnI GAANNNNTTC 3 cut(s) 1480, 3220, 5215
ZraI GACGTC 1 cut(s) 4110
Zsp2I ATGCAT 6 cut(s) 510, 808, 3005, 3549, 5902, 6866
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.