Prupe.2G224500_v2.0.a1

No description available

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Forward (+)
25184767 .. 25192755
7989 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G224500.1

Sequence Viewer

Length: 3969 bp
ATGCCTGTATCAGGAAATGAAGAGACTGGGGTTAAACCCGTTATCCGGAAAACTAGTGATTATGTTGCAGGTGTTCCAATCAAGAAAAGGAGGTTTCCTATAATGAGGCCTCCTTCACCTCCTTCTGAAGAACCAACTTTGTTTCCTAAAACAGAAGAATCATCTTCCTTTCCTTCAAAAAATGATTCACTACAGAAGGAACAATCTAGCCCATCTCAAGGGTCGACTCTTTCATATGCTAGCATAACCAGTTCTGGATTTTCTGATACAACAAAGTATTCTGAATCTGATTATAGAAGAGGAAGGTCTGATGTTACAAATGTTAAGGTGGCCCGAGGCAATGATAATCTCTTTAGAGTCAAAGTTGAAGAACCAAGCCCCACAGTTCACTCGGGTTCTTTGGATGACATGCAGAGGAAAGGGAAGCCTGTGTTGGCTGATAATCCGGCTTCTCAGGTGACCTTAGGGAAAAGTGAGTTGACTTTAGCACCAAATGAAGCTCATGCGCGTAATTTGGGGAAGGAGATTATGCATAGCAAAAGTAAAGTAGAAATGAAGTGTAAAGAAGAAATTCCTGCTGTTGCTGAGAGTACTGAATTATCATTAGGTTTAAAGGAAAATCTTGTTCCAGCTTTGACAGGCCAAAACAGTGGCGGTGATGGGAGTCAGCGGAGTCAGGATAACTTGCCTATTTCACTGAATTTGTCTTTAAGCGAAGAAAAAAACAGCAGCCAGTGCAAAGGAAATGGTGAAGATTTGAATCTTGATGGGGCTGACAAGCGTGCATGGCGGGCAAACTGGGATTTGAATACACCAATGGATGCATGGACAGATTCTGTGAGTGATGCTTCTGAATGTGTTGACGGAATCAATGCAACGGGTGGGGCAGGTGATGCAAAGCAGTTGATTGGTTCAACTGGAATGGTTGGAGCCGGTGTCAATTCAGAAAAACAGACCGTTGTTGATAGTCAGAACAGAACTAATATCACCGTCTCATCCGCACTTGCTAGCCAGCAGTGTAATTCCAATGACACCCTTCTTTTACGGCTTAGTTCATCTTGCTCACAGTTGAATCAGTGTCAAAACACTTCTAGTGCATGCAGTAAATTGGATTTGGACATGGACAGGGTGATTTCTTCTACAAACTCGCCTAGATTGGCTGGGCCAGTTAGAACACTGAACACAGGTAATCGTAGAACTGTAAAATCAGAACCATTTGATGAGAGTGTCAAACTGGATGTTAACATAGCTAAATCCACTAGTACGGGATTTTTAGATAGTAATAGAGCAGGGAAACGTGCAGTTGTTGAGCAGTGCACTCTTGGAGCCGTTAAGTCTTCAAATATGAGCACCCAAAAGTTGGTTGATCCTAGATCCATAAAATCTGAACCAAGTATTGTGGATAATCAAGAAACCATAAATTCCATTGAAGGGACATCAGTTCATCTGGATAAGCATGTGACACAAGGTCTGGATAATTGTTCTAGTGACATGACGTTGCCTATGACTGCAGAGATGTCTTGCCTTTCTGGAAAGCCTTTGTGTTTAACAGAGTCCACAGGGAAGCCTTCTTGTTCAACAGAGTTGACTATGAGTAGGGATTTGACAAAGCATACAGGAAGCTTGAATGCAAAGGCACCTCAGGAAGCTTGTCAAAGCAAAGAGCAAATTGCTGTAACTCTGGGTCTTGACACTAAGGGAAACAGTATGAGAACTGAAGATGATAATGTTGACCGCGGTTATAAATTGAAGTTCATGAATGATCACCCCCTTGATTCACGTGGAAGTGGTGAGGATTCTTCCAGTGATGAGGAAAAGATAAATATCTCAGCAGATATGTTGGAAGATTCTTATGGTTCTGATTATGAATCAGATGGTAATCATGCTTTGGATACAGCTATTGATACAGAACAAGATGCTAAAGATGATGATTATGAAGACGGTGAGGTTCGAGATTCAATTGAGCAGACTGCGGTAGAGGAACTCATATGCAACGCAAGAGAAGCGGAACATGTTGATAATGGTGATTTTGATAATAACCAGACGGATTTTGTGGGACCTGTTAACAATGCTCATCCTACTTCATTTTATATTGAGGCTAAAGACAACAAAACAGATCAGCTTGCTGAAACAAGTAACAGTGATTATAAAGAATCTTTTGATGTAGTTCTTAATGATAAATCTGATAAGGGCTCTGATAAAGATGTGTGTTTGCAAGAAACATTGGCTGTTGAAAAGCTAACCAGAGGAGCTGGTGTGAAAGGGTCCATAAAGGATGTGGGAACAGAACCACTTGATCAATCAGGGAATGAGGATGCCCAGAAATGTCAGGATGGAGAGTTCTCCGAGCAAGTCACTAATGAAAGCCAAGGATATGATCATGGTACAGAGCTGGATGTTAATAAAACTGACCTGGCACCATTGAGTGATTCAAATTTGTCCAAAACATCTGGTAGTGGTGATAATGCTGCTAAGGATACCACTAATGGAGGACAACGGAGCAGGATCATAACTTTGCCTCGATCTTCAACTGTTTCTCCTAGTAAATCAAGATCTATTTCAGGACTACCATTGCCATCAAGAGTAGTTGGAAGAGAAATATTACCTGATGTAACACCGGAGGAAGATAAAATACATCCTAGAGGGAGAGGTGAACTGTATGTTGATAATGCCCACAGATTTTCAAGGGAGCGATACCAAGATCAATCACTGAGATATGCTAGATTGGGTTTTAGACGTGGTAGAGGGAGGATGAATAGTCGCGGTGATTGGGGTTCTGATCGTAACTTTGCTTCGGAGATTTATAATAATCAAACAAACTATCGTGTACCCAGACATAAATATGCACCTGATGTTTCTGATGCTGACCTTGAATATAACACTTATAATATGGGTTCAGATAGTGCATATGTTAGTACAGGTCGTGGAGGGAGGCAGATTCAAAATGATGGACCAATCAACCACCGTATACCCTCAAGGAGGCGATCTCCTGTTGGAACACATGCCATTCACATGGCTCGCAGAAATCCAAGAAATATTAGCCCAACTAGATGCATTGGTGAAGATGCTTCAAATTTGGTTGGAATGAGGCATAATGAGAAGTTTATGAGGAGTTTTCCTGATGATAATGCAGATCCCATGTTCACTCGTACCCAGTCTTCGTATGAGGGAATAGATGGTCAATTTGGACGAGGAAATCGGAACTTTTCTTTTGTCCAAAGAAGAGGGGTTCCTCGAGTTCGCTCAAAATCACCAATAAGGTCCAGGACTCGTTCTCCCGGTCCATGGTCTTCTCCTAGAAGAAGATCCCCAGATGGGTTTGGTGGGCCTGGAGAATTGACTCATCGAAGATCTCCACCAGTTTACAGGATGGAGAGGTTTAGATCCCCTGATGGCCCATGTTTTCCTGGTGAGATGGTTGTTAGAAGGAATCCGCCCAATGATTTGAGGGATATGGATTCTGGAAGGGACCATGGTCCTCCAAGGTCTGTCATTCCTAATAGAAGTCCTTCTGGCCGGGTTTTACTCAGAAACAGGAGATTTGATGTCATGGATCCTCGAGAAAGGCCAAACAATGATGACTACTTTGGGGGGCCTATGCATTCTGGTCGATTGCACGAGCTTGGTGCTGATGGAAATGGTGATGAGAGACGAAGGTTTGGTGAGAGACGTGGACCTGTCCGTTCATTTAGGCCTCCTTATAATGGTGCTGATGGCGAGACATTTCATCTTAATGCAAAGGATGGCCCTAGGCCTTTGAGGTTCTGCCCAGATGATAATACTGAGTTTCAAGAAAGAGGGAATTTGAGGGAAAGGGACTTTGACAGAAGGATTAAGAATCGGCCAGGAAATGCACCTAGAAGAATGAGAGGCATTGAGGACCAAGACGGAAATTACAGGCATGGTGGGCAGGCTTGGCACGATGGTGGGTTTGATGATATGTCACGGGTGAAGAGAAAAAGGTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1323

Amino Acids

145.74

Weight (kDa)

6.03

Isoelectric Point (pI)

55.34

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 5 cut(s) 1743, 2148, 2805, 2886, 3702
AarI CACCTGC 2 cut(s) 59, 878
Acc36I ACCTGC 2 cut(s) 59, 878
AccB1I GGYRCC 2 cut(s) 1636, 2416
AccB7I CCANNNNNTGG 1 cut(s) 1360
AccI GTMKAC 2 cut(s) 224, 2968
AccII CGCG 3 cut(s) 508, 1737, 2763
AccIII TCCGGA 1 cut(s) 45
AclWI GGATC 8 cut(s) 1361, 1368, 2513, 3128, 3300, 3378, 3548, 3561
AcoI YGGCCR 2 cut(s) 3514, 3842
AcsI RAATTY 6 cut(s) 570, 700, 1420, 2434, 3073, 3802
AcuI CTGAAG 2 cut(s) 147, 1737
AcvI CACGTG 1 cut(s) 1781
AfaI GTAC 6 cut(s) 592, 1264, 2386, 2829, 2917, 3151
AfiI CCNNNNNNNGG 9 cut(s) 11, 45, 218, 1360, 1431, 2979, 3285, 3315, 3704
AflIII ACRYGT 1 cut(s) 2011
AhdI GACNNNNNGTC 1 cut(s) 1467
AhlI ACTAGT 2 cut(s) 53, 1259
AjiI CACGTC 2 cut(s) 2738, 3671
AjnI CCWGG 5 cut(s) 2412, 3263, 3328, 3406, 3844
AjuI GAANNNNNNNTTGG 2 cut(s) 416, 448
AleI CACNNNNGTG 1 cut(s) 3924
AloI GAACNNNNNNTCC 2 cut(s) 2324, 2356
Alw21I GWGCWC 2 cut(s) 1319, 1352
Alw26I GTCTC 5 cut(s) 17, 997, 3643, 3661, 3713
Alw44I GTGCAC 1 cut(s) 1315
AlwI GGATC 8 cut(s) 1361, 1368, 2513, 3128, 3300, 3378, 3548, 3561
AlwNI CAGNNNCTG 1 cut(s) 836
Ama87I CYCGRG 4 cut(s) 333, 391, 3234, 3558
Aor13HI TCCGGA 1 cut(s) 45
ApaLI GTGCAC 1 cut(s) 1315
ApeKI GCWGC 2 cut(s) 729, 2468
ApoI RAATTY 6 cut(s) 570, 700, 1420, 2434, 3073, 3802
Asp700I GAANNNNTTC 2 cut(s) 570, 3508
AspA2I CCTAGG 1 cut(s) 3749
AspLEI GCGC 1 cut(s) 508
AsuC2I CCSGG 2 cut(s) 3279, 3518
AsuNHI GCTAGC 2 cut(s) 239, 1007
AvaI CYCGRG 4 cut(s) 333, 391, 3234, 3558
AvaII GGWCC 9 cut(s) 2057, 2265, 2951, 3261, 3281, 3469, 3476, 3674, 3880
AvrII CCTAGG 1 cut(s) 3749
AxyI CCTNAGG 2 cut(s) 463, 1641
BaeGI GKGCMC 1 cut(s) 1319
BamHI GGATCC 1 cut(s) 3553
BanI GGYRCC 2 cut(s) 1636, 2416
BanII GRGCYC 1 cut(s) 2195
BarI GAAGNNNNNNTAC 6 cut(s) 2616, 2648, 2776, 2808, 3142, 3174
BauI CACGAG 1 cut(s) 3617
BbrPI CACGTG 1 cut(s) 1781
BbsI GAAGAC 4 cut(s) 1329, 1944, 3150, 3282
Bbv12I GWGCWC 2 cut(s) 1319, 1352
BbvI GCAGC 2 cut(s) 741, 2455
BceAI ACGGC 2 cut(s) 1061, 1313
BcgI CGANNNNNNTGC 4 cut(s) 3590, 3608, 3624, 3642
BciT130I CCWGG 5 cut(s) 2414, 3265, 3330, 3408, 3846
BciVI GTATCC 2 cut(s) 1885, 2470
BclI TGATCA 3 cut(s) 1762, 2296, 2377
BcnI CCSGG 2 cut(s) 3279, 3518
BcoDI GTCTC 5 cut(s) 17, 997, 3643, 3661, 3713
BcuI ACTAGT 2 cut(s) 53, 1259
BfmI CTRYAG 2 cut(s) 191, 1509
BfuAI ACCTGC 2 cut(s) 59, 878
BfuI GTATCC 2 cut(s) 1885, 2470
BglII AGATCT 2 cut(s) 2552, 3350
BisI GCNGC 2 cut(s) 730, 2469
BlnI CCTAGG 1 cut(s) 3749
BlsI GCNGC 2 cut(s) 731, 2470
BmcAI AGTACT 1 cut(s) 592
Bme1390I CCNGG 7 cut(s) 2414, 3265, 3279, 3330, 3408, 3518, 3846
Bme18I GGWCC 9 cut(s) 2057, 2265, 2951, 3261, 3281, 3469, 3476, 3674, 3880
BmeRI GACNNNNNGTC 1 cut(s) 1467
BmeT110I CYCGRG 4 cut(s) 333, 391, 3234, 3558
BmgBI CACGTC 2 cut(s) 2738, 3671
BmrFI CCNGG 7 cut(s) 2414, 3265, 3279, 3330, 3408, 3518, 3846
BmrI ACTGGG 3 cut(s) 36, 808, 3148
BmsI GCATC 8 cut(s) 811, 835, 883, 1906, 2305, 2851, 3041, 3055
BmtI GCTAGC 2 cut(s) 243, 1011
BmuI ACTGGG 3 cut(s) 36, 808, 3148
BoxI GACNNNNGTC 1 cut(s) 3474
BpiI GAAGAC 4 cut(s) 1329, 1944, 3150, 3282
BplI GAGNNNNNCTC 2 cut(s) 2971, 3003
BpmI CTGGAG 1 cut(s) 3351
Bpu10I CCTNAGC 1 cut(s) 2472
BpuEI CTTGAG 2 cut(s) 201, 2959
BpuMI CCSGG 2 cut(s) 3279, 3518
BsaAI YACGTR 1 cut(s) 1781
BsaBI GATNNNNATC 3 cut(s) 759, 1823, 1878
BsaJI CCNNGG 7 cut(s) 334, 1735, 2368, 3284, 3472, 3482, 3749
BsaWI WCCGGW 2 cut(s) 45, 2617
BsaXI ACNNNNNCTCC 8 cut(s) 921, 951, 2241, 2271, 2521, 2551, 3259, 3289
Bsc4I CCNNNNNNNGG 9 cut(s) 11, 45, 218, 1360, 1431, 2979, 3285, 3315, 3704
Bse118I RCCGGY 1 cut(s) 932
Bse21I CCTNAGG 2 cut(s) 463, 1641
Bse3DI GCAATG 2 cut(s) 346, 2570
Bse8I GATNNNNATC 3 cut(s) 759, 1823, 1878
BseAI TCCGGA 1 cut(s) 45
BseBI CCWGG 5 cut(s) 2414, 3265, 3330, 3408, 3846
BseDI CCNNGG 7 cut(s) 334, 1735, 2368, 3284, 3472, 3482, 3749
BseJI GATNNNNATC 3 cut(s) 759, 1823, 1878
BseLI CCNNNNNNNGG 9 cut(s) 11, 45, 218, 1360, 1431, 2979, 3285, 3315, 3704
BseMI GCAATG 2 cut(s) 346, 2570
BseMII CTCAG 7 cut(s) 467, 576, 1655, 1842, 2702, 3541, 3774
BseRI GAGGAG 2 cut(s) 2262, 3124
BseSI GKGCMC 1 cut(s) 1319
BseXI GCAGC 2 cut(s) 741, 2455
BseYI CCCAGC 1 cut(s) 1160
BsgI GTGCAG 1 cut(s) 1320
Bsh1236I CGCG 3 cut(s) 508, 1737, 2763
BshNI GGYRCC 2 cut(s) 1636, 2416
BsiHKAI GWGCWC 2 cut(s) 1319, 1352
BsiHKCI CYCGRG 4 cut(s) 333, 391, 3234, 3558
BsiSI CCGG 6 cut(s) 46, 446, 933, 2618, 3279, 3517
BslFI GGGAC 4 cut(s) 1447, 2070, 3482, 3830
BslI CCNNNNNNNGG 9 cut(s) 11, 45, 218, 1360, 1431, 2979, 3285, 3315, 3704
BsmAI GTCTC 5 cut(s) 17, 997, 3643, 3661, 3713
BsmBI CGTCTC 3 cut(s) 997, 3643, 3661
BsmFI GGGAC 4 cut(s) 1447, 2070, 3482, 3830
BsmI GAATGC 2 cut(s) 1633, 3601
BsoBI CYCGRG 4 cut(s) 333, 391, 3234, 3558
Bsp1286I GDGCHC 3 cut(s) 1319, 1352, 2195
Bsp13I TCCGGA 1 cut(s) 45
Bsp19I CCATGG 2 cut(s) 3284, 3472
BspCNI CTCAG 7 cut(s) 466, 577, 1654, 1841, 2703, 3540, 3775
BspEI TCCGGA 1 cut(s) 45
BspFNI CGCG 3 cut(s) 508, 1737, 2763
BspHI TCATGA 1 cut(s) 1755
BspMAI CTGCAG 1 cut(s) 1513
BspMI ACCTGC 2 cut(s) 59, 878
BspOI GCTAGC 2 cut(s) 243, 1011
BspPI GGATC 8 cut(s) 1361, 1368, 2513, 3128, 3300, 3378, 3548, 3561
BspT107I GGYRCC 2 cut(s) 1636, 2416
BsrDI GCAATG 2 cut(s) 346, 2570
BsrFI RCCGGY 1 cut(s) 932
BssAI RCCGGY 1 cut(s) 932
BssECI CCNNGG 7 cut(s) 334, 1735, 2368, 3284, 3472, 3482, 3749
BssNAI GTATAC 1 cut(s) 2969
BssSI CACGAG 1 cut(s) 3617
BssT1I CCWWGG 5 cut(s) 2368, 3284, 3472, 3482, 3749
Bst1107I GTATAC 1 cut(s) 2969
Bst2BI CACGAG 1 cut(s) 3617
Bst2UI CCWGG 5 cut(s) 2414, 3265, 3330, 3408, 3846
Bst6I CTCTTC 5 cut(s) 15, 292, 2587, 3217, 3947
BstAPI GCANNNNNTGC 2 cut(s) 735, 893
BstBAI YACGTR 1 cut(s) 1781
BstC8I GCNNGC 9 cut(s) 241, 783, 792, 1009, 1013, 1099, 2124, 3019, 3912
BstDSI CCRYGG 3 cut(s) 1735, 3284, 3472
BstEII GGTNACC 1 cut(s) 457
BstENI CCTNNNNNAGG 2 cut(s) 9, 2977
BstFNI CGCG 3 cut(s) 508, 1737, 2763
BstHHI GCGC 1 cut(s) 508
BstMAI GTCTC 5 cut(s) 17, 997, 3643, 3661, 3713
BstMWI GCNNNNNNNGC 7 cut(s) 735, 787, 791, 893, 2003, 3907, 3916
BstNI CCWGG 5 cut(s) 2414, 3265, 3330, 3408, 3846
BstNSI RCATGY 5 cut(s) 412, 1101, 1460, 2015, 3005
BstPAI GACNNNNGTC 1 cut(s) 3474
BstPI GGTNACC 1 cut(s) 457
BstSCI CCNGG 7 cut(s) 2412, 3263, 3277, 3328, 3406, 3516, 3844
BstSFI CTRYAG 2 cut(s) 191, 1509
BstSLI GKGCMC 1 cut(s) 1319
BstUI CGCG 3 cut(s) 508, 1737, 2763
BstV1I GCAGC 2 cut(s) 741, 2455
BstV2I GAAGAC 4 cut(s) 1329, 1944, 3150, 3282
BstX2I RGATCY 7 cut(s) 1373, 2552, 3133, 3305, 3350, 3383, 3553
BstXI CCANNNNNNTGG 2 cut(s) 650, 3013
BstYI RGATCY 7 cut(s) 1373, 2552, 3133, 3305, 3350, 3383, 3553
BstZ17I GTATAC 1 cut(s) 2969
Bsu36I CCTNAGG 2 cut(s) 463, 1641
BsuI GTATCC 2 cut(s) 1885, 2470
BtgI CCRYGG 3 cut(s) 1735, 3284, 3472
BtrI CACGTC 2 cut(s) 2738, 3671
BtsI GCAGTG 2 cut(s) 1022, 1319
BveI ACCTGC 2 cut(s) 59, 878
Cac8I GCNNGC 9 cut(s) 241, 783, 792, 1009, 1013, 1099, 2124, 3019, 3912
CaiI CAGNNNCTG 1 cut(s) 836
CciI TCATGA 1 cut(s) 1755
CfoI GCGC 1 cut(s) 508
Cfr10I RCCGGY 1 cut(s) 932
Cfr42I CCGCGG 1 cut(s) 1738
Csp6I GTAC 6 cut(s) 591, 1263, 2385, 2828, 2916, 3150
CspCI CAANNNNNGTGG 2 cut(s) 1380, 1415
CviQI GTAC 6 cut(s) 591, 1263, 2385, 2828, 2916, 3150
DraI TTTAAA 1 cut(s) 612
DriI GACNNNNNGTC 1 cut(s) 1467
EaeI YGGCCR 2 cut(s) 3514, 3842
Eam1104I CTCTTC 5 cut(s) 15, 292, 2587, 3217, 3947
Eam1105I GACNNNNNGTC 1 cut(s) 1467
EarI CTCTTC 5 cut(s) 15, 292, 2587, 3217, 3947
EciI GGCGGA 1 cut(s) 3423
Eco130I CCWWGG 5 cut(s) 2368, 3284, 3472, 3482, 3749
Eco147I AGGCCT 3 cut(s) 109, 3694, 3754
Eco24I GRGCYC 1 cut(s) 2195
Eco47I GGWCC 9 cut(s) 2057, 2265, 2951, 3261, 3281, 3469, 3476, 3674, 3880
Eco57I CTGAAG 2 cut(s) 147, 1737
Eco72I CACGTG 1 cut(s) 1781
Eco81I CCTNAGG 2 cut(s) 463, 1641
Eco88I CYCGRG 4 cut(s) 333, 391, 3234, 3558
Eco91I GGTNACC 1 cut(s) 457
EcoNI CCTNNNNNAGG 2 cut(s) 9, 2977
EcoO109I RGGNCCY 2 cut(s) 2057, 3593
EcoO65I GGTNACC 1 cut(s) 457
EcoRII CCWGG 5 cut(s) 2412, 3263, 3328, 3406, 3844
EcoT14I CCWWGG 5 cut(s) 2368, 3284, 3472, 3482, 3749
EcoT22I ATGCAT 4 cut(s) 534, 826, 3056, 3603
EcoT38I GRGCYC 1 cut(s) 2195
ErhI CCWWGG 5 cut(s) 2368, 3284, 3472, 3482, 3749
Esp3I CGTCTC 3 cut(s) 997, 3643, 3661
FaqI GGGAC 4 cut(s) 1447, 2070, 3482, 3830
FauI CCCGC 1 cut(s) 783
FauNDI CATATG 3 cut(s) 235, 1988, 2908
FbaI TGATCA 3 cut(s) 1762, 2296, 2377
FblI GTMKAC 2 cut(s) 224, 2968
Fnu4HI GCNGC 2 cut(s) 730, 2469
FriOI GRGCYC 1 cut(s) 2195
Fsp4HI GCNGC 2 cut(s) 730, 2469
GlaI GCGC 1 cut(s) 507
GluI GCNGC 2 cut(s) 730, 2469
GsaI CCCAGC 1 cut(s) 1164
GsuI CTGGAG 1 cut(s) 3351
HapII CCGG 6 cut(s) 46, 446, 933, 2618, 3279, 3517
HhaI GCGC 1 cut(s) 508
Hin6I GCGC 1 cut(s) 506
HinP1I GCGC 1 cut(s) 506
HincII GTYRAC 7 cut(s) 225, 480, 862, 1243, 1587, 1732, 2065
HindII GTYRAC 7 cut(s) 225, 480, 862, 1243, 1587, 1732, 2065
HindIII AAGCTT 2 cut(s) 1621, 1647
HpaI GTTAAC 2 cut(s) 1243, 2065
HpaII CCGG 6 cut(s) 46, 446, 933, 2618, 3279, 3517
HpyCH4IV ACGT 5 cut(s) 1297, 1496, 1780, 2737, 3670
HpyF10VI GCNNNNNNNGC 7 cut(s) 735, 787, 791, 893, 2003, 3907, 3916
HpySE526I ACGT 5 cut(s) 1297, 1496, 1780, 2737, 3670
HspAI GCGC 1 cut(s) 506
Kpn2I TCCGGA 1 cut(s) 45
Ksp22I TGATCA 3 cut(s) 1762, 2296, 2377
KspAI GTTAAC 2 cut(s) 1243, 2065
KspI CCGCGG 1 cut(s) 1738
LmnI GCTCC 5 cut(s) 929, 1325, 2249, 2499, 2689
Lsp1109I GCAGC 2 cut(s) 741, 2455
LweI GCATC 8 cut(s) 811, 835, 883, 1906, 2305, 2851, 3041, 3055
MaeII ACGT 5 cut(s) 1297, 1496, 1780, 2737, 3670
MfeI CAATTG 1 cut(s) 1959
MflI RGATCY 7 cut(s) 1373, 2552, 3133, 3305, 3350, 3383, 3553
MhlI GDGCHC 3 cut(s) 1319, 1352, 2195
MlyI GAGTC 7 cut(s) 220, 366, 673, 682, 1562, 3262, 3334
MmeI TCCRAC 5 cut(s) 907, 1821, 2569, 2974, 3061
Mph1103I ATGCAT 4 cut(s) 534, 826, 3056, 3603
MroI TCCGGA 1 cut(s) 45
MroXI GAANNNNTTC 2 cut(s) 570, 3508
MslI CAYNNNNRTG 4 cut(s) 2841, 3011, 3732, 3924
MspA1I CMGCKG 2 cut(s) 670, 1737
MspI CCGG 6 cut(s) 46, 446, 933, 2618, 3279, 3517
MspR9I CCNGG 7 cut(s) 2414, 3265, 3279, 3330, 3408, 3518, 3846
MunI CAATTG 1 cut(s) 1959
Mva1269I GAATGC 2 cut(s) 1633, 3601
MvaI CCWGG 5 cut(s) 2414, 3265, 3330, 3408, 3846
MvnI CGCG 3 cut(s) 508, 1737, 2763
MwoI GCNNNNNNNGC 7 cut(s) 735, 787, 791, 893, 2003, 3907, 3916
NciI CCSGG 2 cut(s) 3279, 3518
NcoI CCATGG 2 cut(s) 3284, 3472
NdeI CATATG 3 cut(s) 235, 1988, 2908
NheI GCTAGC 2 cut(s) 239, 1007
NmuCI GTSAC 5 cut(s) 457, 1459, 1487, 2353, 3942
NsiI ATGCAT 4 cut(s) 534, 826, 3056, 3603
NspI RCATGY 5 cut(s) 412, 1101, 1460, 2015, 3005
OliI CACNNNNGTG 1 cut(s) 3924
PaeI GCATGC 1 cut(s) 1101
PaeR7I CTCGAG 2 cut(s) 3234, 3558
PagI TCATGA 1 cut(s) 1755
PaqCI CACCTGC 2 cut(s) 59, 878
PceI AGGCCT 3 cut(s) 109, 3694, 3754
PciI ACATGT 1 cut(s) 2011
PctI GAATGC 2 cut(s) 1633, 3601
PdmI GAANNNNTTC 2 cut(s) 570, 3508
PflMI CCANNNNNTGG 1 cut(s) 1360
PfoI TCCNGGA 1 cut(s) 3263
PkrI GCNGC 2 cut(s) 731, 2470
PleI GAGTC 7 cut(s) 220, 365, 672, 681, 1561, 3262, 3334
PmaCI CACGTG 1 cut(s) 1781
PmlI CACGTG 1 cut(s) 1781
PpsI GAGTC 7 cut(s) 220, 365, 672, 681, 1561, 3262, 3334
Ppu21I YACGTR 1 cut(s) 1781
PpuMI RGGWCCY 1 cut(s) 2057
PscI ACATGT 1 cut(s) 2011
PshAI GACNNNNGTC 1 cut(s) 3474
PsiI TTATAA 5 cut(s) 1743, 2148, 2805, 2886, 3702
Psp5II RGGWCCY 1 cut(s) 2057
Psp6I CCWGG 5 cut(s) 2412, 3263, 3328, 3406, 3844
PspCI CACGTG 1 cut(s) 1781
PspEI GGTNACC 1 cut(s) 457
PspFI CCCAGC 1 cut(s) 1160
PspGI CCWGG 5 cut(s) 2412, 3263, 3328, 3406, 3844
PspPPI RGGWCCY 1 cut(s) 2057
PspXI VCTCGAGB 1 cut(s) 3234
PstI CTGCAG 1 cut(s) 1513
PstNI CAGNNNCTG 1 cut(s) 836
PsuI RGATCY 7 cut(s) 1373, 2552, 3133, 3305, 3350, 3383, 3553
RsaI GTAC 6 cut(s) 592, 1264, 2386, 2829, 2917, 3151
RsaNI GTAC 6 cut(s) 591, 1263, 2385, 2828, 2916, 3150
RseI CAYNNNNRTG 4 cut(s) 2841, 3011, 3732, 3924
SacII CCGCGG 1 cut(s) 1738
SalI GTCGAC 1 cut(s) 223
SatI GCNGC 2 cut(s) 730, 2469
ScaI AGTACT 1 cut(s) 592
SchI GAGTC 7 cut(s) 220, 366, 673, 682, 1562, 3262, 3334
ScrFI CCNGG 7 cut(s) 2414, 3265, 3279, 3330, 3408, 3518, 3846
SduI GDGCHC 3 cut(s) 1319, 1352, 2195
SfaNI GCATC 8 cut(s) 811, 835, 883, 1906, 2305, 2851, 3041, 3055
SfcI CTRYAG 2 cut(s) 191, 1509
Sfr274I CTCGAG 2 cut(s) 3234, 3558
Sfr303I CCGCGG 1 cut(s) 1738
SgrBI CCGCGG 1 cut(s) 1738
SinI GGWCC 9 cut(s) 2057, 2265, 2951, 3261, 3281, 3469, 3476, 3674, 3880
SlaI CTCGAG 2 cut(s) 3234, 3558
SmiMI CAYNNNNRTG 4 cut(s) 2841, 3011, 3732, 3924
SmlI CTYRAG 4 cut(s) 216, 2974, 3234, 3558
SmoI CTYRAG 4 cut(s) 216, 2974, 3234, 3558
SpeI ACTAGT 2 cut(s) 53, 1259
SphI GCATGC 1 cut(s) 1101
SseBI AGGCCT 3 cut(s) 109, 3694, 3754
SspI AATATT 2 cut(s) 2601, 3037
StuI AGGCCT 3 cut(s) 109, 3694, 3754
StyD4I CCNGG 7 cut(s) 2412, 3263, 3277, 3328, 3406, 3516, 3844
StyI CCWWGG 5 cut(s) 2368, 3284, 3472, 3482, 3749
TaiI ACGT 5 cut(s) 1300, 1499, 1783, 2740, 3673
TaqI TCGA 7 cut(s) 224, 1951, 2521, 3235, 3346, 3559, 3610
TatI WGTACW 2 cut(s) 590, 2915
TseFI GTSAC 5 cut(s) 457, 1459, 1487, 2353, 3942
TseI GCWGC 2 cut(s) 729, 2468
Tsp45I GTSAC 5 cut(s) 457, 1459, 1487, 2353, 3942
TspGWI ACGGA 5 cut(s) 879, 2060, 2512, 3671, 3903
Van91I CCANNNNNTGG 1 cut(s) 1360
VneI GTGCAC 1 cut(s) 1315
VpaK11BI GGWCC 9 cut(s) 2057, 2265, 2951, 3261, 3281, 3469, 3476, 3674, 3880
XagI CCTNNNNNAGG 2 cut(s) 9, 2977
XapI RAATTY 6 cut(s) 570, 700, 1420, 2434, 3073, 3802
XceI RCATGY 5 cut(s) 412, 1101, 1460, 2015, 3005
XcmI CCANNNNNNNNNTGG 2 cut(s) 822, 2275
XhoI CTCGAG 2 cut(s) 3234, 3558
XmaJI CCTAGG 1 cut(s) 3749
XmiI GTMKAC 2 cut(s) 224, 2968
XmnI GAANNNNTTC 2 cut(s) 570, 3508
ZrmI AGTACT 1 cut(s) 592
Zsp2I ATGCAT 4 cut(s) 534, 826, 3056, 3603
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.