No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G13590 AT5G13590 AT5G13590 AT5G13590 AT5G13590 AT5G13590 |
| fragaria_vesca | FvH4_7g20760 |
| malus_domestica | MD01G1117200.v1.1 MD07G1184600.v1.1 |
| prunus_persica | Prupe.2G224500_v2.0.a1 |
| pyrus_communis | pycom01g14480 pycom07g17670 |
| rosa_chinensis | RchiOBHm_Chr1g0365001 |
| rosa_laevigata | RLG00000027451 |
| rosa_multiflora | Rmu_sc0000418.1_g000009 Rmu_ssc0000112.1_g000020 |
| rosa_roxburghii | Rroxscaffold_1G00022860 Rroxscaffold_2G00110440 Rroxscaffold_4G00291580 Rroxscaffold_4G00292010 |
| rosa_rugosa | Rorug01G0318800 Rorug02G0315200 |
| rosa_samantha | Rh1AG327800 Rh1BG289100 Rh1CG305800 Rh1DG320600 |
| rosa_wichuraiana | Rw1G029060 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 4 cut(s) | 2369, 2661, 2739, 3546 |
| AasI | GACNNNNNNGTC | 2 cut(s) | 862, 1261 |
| AbsI | CCTCGAGG | 1 cut(s) | 2496 |
| Acc36I | ACCTGC | 1 cut(s) | 2470 |
| Acc65I | GGTACC | 1 cut(s) | 2550 |
| AccB1I | GGYRCC | 1 cut(s) | 2550 |
| AccBSI | CCGCTC | 2 cut(s) | 425, 2548 |
| AccI | GTMKAC | 3 cut(s) | 98, 1265, 2815 |
| AccIII | TCCGGA | 2 cut(s) | 131, 1312 |
| AciI | CCGC | 6 cut(s) | 425, 2356, 2548, 2648, 3407, 3428 |
| AclWI | GGATC | 6 cut(s) | 1202, 1209, 2975, 3147, 3219, 3386 |
| AcoI | YGGCCR | 1 cut(s) | 2767 |
| AcsI | RAATTY | 9 cut(s) | 135, 358, 580, 1199, 2454, 2572, 2581, 2881, 3736 |
| AcuI | CTGAAG | 3 cut(s) | 48, 261, 2733 |
| AfaI | GTAC | 8 cut(s) | 66, 1696, 1921, 2277, 2552, 2675, 2998, 3529 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 91, 553, 1936, 2843, 3234, 3235 |
| AflIII | ACRYGT | 1 cut(s) | 1297 |
| AgeI | ACCGGT | 1 cut(s) | 3520 |
| AhlI | ACTAGT | 1 cut(s) | 125 |
| AjiI | CACGTC | 1 cut(s) | 2591 |
| AjnI | CCWGG | 5 cut(s) | 157, 1521, 1815, 3175, 3688 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 3106, 3138 |
| Alw21I | GWGCWC | 4 cut(s) | 655, 1827, 2090, 2239 |
| AlwI | GGATC | 6 cut(s) | 1202, 1209, 2975, 3147, 3219, 3386 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 737 |
| Ama87I | CYCGRG | 2 cut(s) | 2496, 3396 |
| Aor13HI | TCCGGA | 2 cut(s) | 131, 1312 |
| AoxI | GGCC | 9 cut(s) | 517, 1022, 2767, 3173, 3437, 3536, 3589, 3596, 3686 |
| ApeKI | GCWGC | 5 cut(s) | 998, 1349, 1405, 1477, 2645 |
| ApoI | RAATTY | 9 cut(s) | 135, 358, 580, 1199, 2454, 2572, 2581, 2881, 3736 |
| AsiGI | ACCGGT | 1 cut(s) | 3520 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1378, 3118 |
| Asp718I | GGTACC | 1 cut(s) | 2550 |
| AspA2I | CCTAGG | 2 cut(s) | 1010, 3593 |
| AsuHPI | GGTGA | 8 cut(s) | 9, 536, 2330, 2519, 2918, 3518, 3572, 3632 |
| AvaI | CYCGRG | 2 cut(s) | 2496, 3396 |
| AvrII | CCTAGG | 2 cut(s) | 1010, 3593 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1797, 1830 |
| BanI | GGYRCC | 1 cut(s) | 2550 |
| BanII | GRGCYC | 2 cut(s) | 1827, 2090 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2989, 3021 |
| BauI | CACGAG | 1 cut(s) | 1623 |
| Bbv12I | GWGCWC | 4 cut(s) | 655, 1827, 2090, 2239 |
| BbvCI | CCTCAGC | 1 cut(s) | 462 |
| BbvI | GCAGC | 5 cut(s) | 985, 1336, 1417, 1464, 2657 |
| BceAI | ACGGC | 2 cut(s) | 1824, 2754 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1493, 1527, 3434, 3468 |
| BciT130I | CCWGG | 5 cut(s) | 159, 1523, 1817, 3177, 3690 |
| BciVI | GTATCC | 4 cut(s) | 1798, 2236, 2329, 3292 |
| BclI | TGATCA | 3 cut(s) | 742, 1984, 2140 |
| BcuI | ACTAGT | 1 cut(s) | 125 |
| BfmI | CTRYAG | 6 cut(s) | 1350, 1725, 2205, 2223, 2530, 2976 |
| BfuAI | ACCTGC | 1 cut(s) | 2470 |
| BfuI | GTATCC | 4 cut(s) | 1798, 2236, 2329, 3292 |
| BglII | AGATCT | 1 cut(s) | 2008 |
| BisI | GCNGC | 5 cut(s) | 999, 1350, 1406, 1478, 2646 |
| BlnI | CCTAGG | 2 cut(s) | 1010, 3593 |
| BlsI | GCNGC | 5 cut(s) | 1000, 1351, 1407, 1479, 2647 |
| Bme1390I | CCNGG | 5 cut(s) | 159, 1523, 1817, 3177, 3690 |
| BmeT110I | CYCGRG | 2 cut(s) | 2496, 3396 |
| BmgBI | CACGTC | 1 cut(s) | 2591 |
| BmrFI | CCNGG | 5 cut(s) | 159, 1523, 1817, 3177, 3690 |
| BmrI | ACTGGG | 3 cut(s) | 688, 1095, 1410 |
| BmsI | GCATC | 8 cut(s) | 133, 438, 691, 715, 2072, 2167, 2888, 3248 |
| BmuI | ACTGGG | 3 cut(s) | 688, 1095, 1410 |
| BoxI | GACNNNNGTC | 1 cut(s) | 3315 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 355, 387, 2174, 2206, 2818, 2850 |
| BpmI | CTGGAG | 3 cut(s) | 714, 3198, 3270 |
| Bpu10I | CCTNAGC | 2 cut(s) | 462, 2238 |
| BpuEI | CTTGAG | 3 cut(s) | 357, 1259, 2806 |
| BsaBI | GATNNNNATC | 4 cut(s) | 1716, 2007, 2410, 3223 |
| BsaI | GGTCTC | 4 cut(s) | 358, 2400, 2838, 3303 |
| BsaWI | WCCGGW | 4 cut(s) | 131, 1312, 3520, 3603 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 91, 553, 1936, 2843, 3234, 3235 |
| Bse118I | RCCGGY | 1 cut(s) | 3520 |
| Bse1I | ACTGG | 8 cut(s) | 683, 731, 1101, 1293, 1405, 1641, 2340, 3253 |
| Bse3DI | GCAATG | 2 cut(s) | 966, 2122 |
| Bse8I | GATNNNNATC | 4 cut(s) | 1716, 2007, 2410, 3223 |
| BseAI | TCCGGA | 2 cut(s) | 131, 1312 |
| BseBI | CCWGG | 5 cut(s) | 159, 1523, 1817, 3177, 3690 |
| BseJI | GATNNNNATC | 4 cut(s) | 1716, 2007, 2410, 3223 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 91, 553, 1936, 2843, 3234, 3235 |
| BseMI | GCAATG | 2 cut(s) | 966, 2122 |
| BseMII | CTCAG | 9 cut(s) | 104, 453, 668, 825, 1451, 2082, 2238, 2252, 3618 |
| BseNI | ACTGG | 8 cut(s) | 683, 731, 1101, 1293, 1405, 1641, 2340, 3253 |
| BseRI | GAGGAG | 2 cut(s) | 1168, 3508 |
| BseXI | GCAGC | 5 cut(s) | 985, 1336, 1417, 1464, 2657 |
| BsgI | GTGCAG | 1 cut(s) | 309 |
| BshFI | GGCC | 9 cut(s) | 519, 1024, 2769, 3175, 3439, 3538, 3591, 3598, 3688 |
| BshNI | GGYRCC | 1 cut(s) | 2550 |
| BshTI | ACCGGT | 1 cut(s) | 3520 |
| BsiHKAI | GWGCWC | 4 cut(s) | 655, 1827, 2090, 2239 |
| BsiHKCI | CYCGRG | 2 cut(s) | 2496, 3396 |
| BsiSI | CCGG | 5 cut(s) | 132, 1313, 2362, 3521, 3604 |
| BslFI | GGGAC | 5 cut(s) | 780, 1125, 1911, 2859, 3531 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 91, 553, 1936, 2843, 3234, 3235 |
| BsmBI | CGTCTC | 3 cut(s) | 1247, 2821, 3505 |
| BsmFI | GGGAC | 5 cut(s) | 780, 1125, 1911, 2859, 3531 |
| BsmI | GAATGC | 3 cut(s) | 1858, 3333, 3445 |
| BsnI | GGCC | 9 cut(s) | 519, 1024, 2769, 3175, 3439, 3538, 3591, 3598, 3688 |
| Bso31I | GGTCTC | 4 cut(s) | 358, 2400, 2838, 3303 |
| BsoBI | CYCGRG | 2 cut(s) | 2496, 3396 |
| Bsp1286I | GDGCHC | 4 cut(s) | 655, 1827, 2090, 2239 |
| Bsp13I | TCCGGA | 2 cut(s) | 131, 1312 |
| Bsp19I | CCATGG | 4 cut(s) | 646, 3131, 3313, 3758 |
| BspACI | CCGC | 6 cut(s) | 425, 2356, 2548, 2648, 3407, 3428 |
| BspANI | GGCC | 9 cut(s) | 519, 1024, 2769, 3175, 3439, 3538, 3591, 3598, 3688 |
| BspCNI | CTCAG | 9 cut(s) | 103, 454, 667, 824, 1450, 2083, 2239, 2251, 3619 |
| BspEI | TCCGGA | 2 cut(s) | 131, 1312 |
| BspHI | TCATGA | 2 cut(s) | 1528, 1987 |
| BspMAI | CTGCAG | 2 cut(s) | 1354, 2227 |
| BspMI | ACCTGC | 1 cut(s) | 2470 |
| BspPI | GGATC | 6 cut(s) | 1202, 1209, 2975, 3147, 3219, 3386 |
| BspT107I | GGYRCC | 1 cut(s) | 2550 |
| BspTNI | GGTCTC | 4 cut(s) | 358, 2400, 2838, 3303 |
| BsrBI | CCGCTC | 2 cut(s) | 425, 2548 |
| BsrDI | GCAATG | 2 cut(s) | 966, 2122 |
| BsrFI | RCCGGY | 1 cut(s) | 3520 |
| BsrI | ACTGG | 8 cut(s) | 683, 731, 1101, 1293, 1405, 1641, 2340, 3253 |
| BssAI | RCCGGY | 1 cut(s) | 3520 |
| BssNAI | GTATAC | 1 cut(s) | 2816 |
| BssSI | CACGAG | 1 cut(s) | 1623 |
| BssT1I | CCWWGG | 8 cut(s) | 211, 646, 1010, 2215, 3131, 3313, 3593, 3758 |
| Bst1107I | GTATAC | 1 cut(s) | 2816 |
| Bst2BI | CACGAG | 1 cut(s) | 1623 |
| Bst2UI | CCWGG | 5 cut(s) | 159, 1523, 1817, 3177, 3690 |
| Bst4CI | ACNGT | 9 cut(s) | 229, 1060, 1162, 2615, 2678, 2813, 2832, 3304, 3551 |
| Bst6I | CTCTTC | 6 cut(s) | 169, 438, 909, 2147, 2443, 3791 |
| BstC8I | GCNNGC | 5 cut(s) | 453, 663, 881, 2054, 3686 |
| BstDSI | CCRYGG | 6 cut(s) | 646, 2614, 2770, 3131, 3313, 3758 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 119, 152, 671, 889, 2094 |
| BstNI | CCWGG | 5 cut(s) | 159, 1523, 1817, 3177, 3690 |
| BstNSI | RCATGY | 4 cut(s) | 669, 773, 1301, 1552 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 3315 |
| BstSCI | CCNGG | 5 cut(s) | 157, 1521, 1815, 3175, 3688 |
| BstSFI | CTRYAG | 6 cut(s) | 1350, 1725, 2205, 2223, 2530, 2976 |
| BstV1I | GCAGC | 5 cut(s) | 985, 1336, 1417, 1464, 2657 |
| BstX2I | RGATCY | 6 cut(s) | 1214, 2008, 2980, 3152, 3224, 3391 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1108 |
| BstYI | RGATCY | 6 cut(s) | 1214, 2008, 2980, 3152, 3224, 3391 |
| BstZ17I | GTATAC | 1 cut(s) | 2816 |
| BsuI | GTATCC | 4 cut(s) | 1798, 2236, 2329, 3292 |
| BsuRI | GGCC | 9 cut(s) | 519, 1024, 2769, 3175, 3439, 3538, 3591, 3598, 3688 |
| BtgI | CCRYGG | 6 cut(s) | 646, 2614, 2770, 3131, 3313, 3758 |
| BtgZI | GCGATG | 1 cut(s) | 3762 |
| BtrI | CACGTC | 1 cut(s) | 2591 |
| BtsI | GCAGTG | 1 cut(s) | 932 |
| BtsIMutI | CAGTG | 7 cut(s) | 613, 757, 932, 1158, 1648, 2583, 3556 |
| BveI | ACCTGC | 1 cut(s) | 2470 |
| Cac8I | GCNNGC | 5 cut(s) | 453, 663, 881, 2054, 3686 |
| CaiI | CAGNNNCTG | 1 cut(s) | 737 |
| CciI | TCATGA | 2 cut(s) | 1528, 1987 |
| Cfr10I | RCCGGY | 1 cut(s) | 3520 |
| CpoI | CGGWCCG | 1 cut(s) | 3523 |
| CseI | GACGC | 1 cut(s) | 2723 |
| Csp6I | GTAC | 8 cut(s) | 65, 1695, 1920, 2276, 2551, 2674, 2997, 3528 |
| CspAI | ACCGGT | 1 cut(s) | 3520 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1827, 1862 |
| CspI | CGGWCCG | 1 cut(s) | 3523 |
| CviQI | GTAC | 8 cut(s) | 65, 1695, 1920, 2276, 2551, 2674, 2997, 3528 |
| DraI | TTTAAA | 1 cut(s) | 2388 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 862, 1261 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 862, 1261 |
| EaeI | YGGCCR | 1 cut(s) | 2767 |
| Eam1104I | CTCTTC | 6 cut(s) | 169, 438, 909, 2147, 2443, 3791 |
| EarI | CTCTTC | 6 cut(s) | 169, 438, 909, 2147, 2443, 3791 |
| EciI | GGCGGA | 1 cut(s) | 3422 |
| Ecl136II | GAGCTC | 2 cut(s) | 1825, 2088 |
| Eco130I | CCWWGG | 8 cut(s) | 211, 646, 1010, 2215, 3131, 3313, 3593, 3758 |
| Eco147I | AGGCCT | 2 cut(s) | 3538, 3598 |
| Eco24I | GRGCYC | 2 cut(s) | 1827, 2090 |
| Eco31I | GGTCTC | 4 cut(s) | 358, 2400, 2838, 3303 |
| Eco32I | GATATC | 1 cut(s) | 3784 |
| Eco53kI | GAGCTC | 2 cut(s) | 1825, 2088 |
| Eco57I | CTGAAG | 3 cut(s) | 48, 261, 2733 |
| Eco88I | CYCGRG | 2 cut(s) | 2496, 3396 |
| EcoICRI | GAGCTC | 2 cut(s) | 1825, 2088 |
| EcoO109I | RGGNCCY | 4 cut(s) | 1898, 2846, 3051, 3437 |
| EcoRI | GAATTC | 1 cut(s) | 2572 |
| EcoRII | CCWGG | 5 cut(s) | 157, 1521, 1815, 3175, 3688 |
| EcoRV | GATATC | 1 cut(s) | 3784 |
| EcoT14I | CCWWGG | 8 cut(s) | 211, 646, 1010, 2215, 3131, 3313, 3593, 3758 |
| EcoT22I | ATGCAT | 4 cut(s) | 411, 706, 2903, 3447 |
| EcoT38I | GRGCYC | 2 cut(s) | 1827, 2090 |
| ErhI | CCWWGG | 8 cut(s) | 211, 646, 1010, 2215, 3131, 3313, 3593, 3758 |
| Esp3I | CGTCTC | 3 cut(s) | 1247, 2821, 3505 |
| FaqI | GGGAC | 5 cut(s) | 780, 1125, 1911, 2859, 3531 |
| FauI | CCCGC | 1 cut(s) | 3421 |
| FauNDI | CATATG | 2 cut(s) | 109, 3010 |
| FbaI | TGATCA | 3 cut(s) | 742, 1984, 2140 |
| FblI | GTMKAC | 3 cut(s) | 98, 1265, 2815 |
| Fnu4HI | GCNGC | 5 cut(s) | 999, 1350, 1406, 1478, 2646 |
| FriOI | GRGCYC | 2 cut(s) | 1827, 2090 |
| Fsp4HI | GCNGC | 5 cut(s) | 999, 1350, 1406, 1478, 2646 |
| GluI | GCNGC | 5 cut(s) | 999, 1350, 1406, 1478, 2646 |
| GsuI | CTGGAG | 3 cut(s) | 714, 3198, 3270 |
| HaeIII | GGCC | 9 cut(s) | 519, 1024, 2769, 3175, 3439, 3538, 3591, 3598, 3688 |
| HapII | CCGG | 5 cut(s) | 132, 1313, 2362, 3521, 3604 |
| HgaI | GACGC | 1 cut(s) | 2723 |
| HincII | GTYRAC | 5 cut(s) | 99, 1398, 1428, 2521, 3577 |
| HindII | GTYRAC | 5 cut(s) | 99, 1398, 1428, 2521, 3577 |
| HindIII | AAGCTT | 3 cut(s) | 1488, 2783, 2948 |
| HpaI | GTTAAC | 1 cut(s) | 3577 |
| HpaII | CCGG | 5 cut(s) | 132, 1313, 2362, 3521, 3604 |
| HphI | GGTGA | 8 cut(s) | 9, 536, 2330, 2519, 2918, 3518, 3572, 3632 |
| Hpy166II | GTNNAC | 8 cut(s) | 99, 1174, 1266, 1398, 1428, 2521, 2816, 3577 |
| Hpy8I | GTNNAC | 8 cut(s) | 99, 1174, 1266, 1398, 1428, 2521, 2816, 3577 |
| HpyCH4III | ACNGT | 9 cut(s) | 229, 1060, 1162, 2615, 2678, 2813, 2832, 3304, 3551 |
| HpyCH4IV | ACGT | 4 cut(s) | 496, 2513, 2590, 2915 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 119, 152, 671, 889, 2094 |
| HpySE526I | ACGT | 4 cut(s) | 496, 2513, 2590, 2915 |
| Kpn2I | TCCGGA | 2 cut(s) | 131, 1312 |
| KpnI | GGTACC | 1 cut(s) | 2554 |
| Ksp22I | TGATCA | 3 cut(s) | 742, 1984, 2140 |
| KspAI | GTTAAC | 1 cut(s) | 3577 |
| LmnI | GCTCC | 9 cut(s) | 160, 382, 733, 1166, 2194, 2358, 2545, 2650, 3744 |
| Lsp1109I | GCAGC | 5 cut(s) | 985, 1336, 1417, 1464, 2657 |
| LweI | GCATC | 8 cut(s) | 133, 438, 691, 715, 2072, 2167, 2888, 3248 |
| MaeII | ACGT | 4 cut(s) | 496, 2513, 2590, 2915 |
| MaeIII | GTNAC | 8 cut(s) | 542, 836, 1976, 2119, 2200, 2326, 2467, 2636 |
| MbiI | CCGCTC | 2 cut(s) | 425, 2548 |
| MfeI | CAATTG | 1 cut(s) | 783 |
| MflI | RGATCY | 6 cut(s) | 1214, 2008, 2980, 3152, 3224, 3391 |
| MhlI | GDGCHC | 4 cut(s) | 655, 1827, 2090, 2239 |
| MlyI | GAGTC | 8 cut(s) | 243, 550, 1095, 1403, 1429, 1457, 1844, 3352 |
| MmeI | TCCRAC | 3 cut(s) | 960, 1144, 1309 |
| Mph1103I | ATGCAT | 4 cut(s) | 411, 706, 2903, 3447 |
| MroI | TCCGGA | 2 cut(s) | 131, 1312 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1378, 3118 |
| MslI | CAYNNNNRTG | 1 cut(s) | 2694 |
| MspA1I | CMGCKG | 2 cut(s) | 2356, 2648 |
| MspI | CCGG | 5 cut(s) | 132, 1313, 2362, 3521, 3604 |
| MspR9I | CCNGG | 5 cut(s) | 159, 1523, 1817, 3177, 3690 |
| MunI | CAATTG | 1 cut(s) | 783 |
| Mva1269I | GAATGC | 3 cut(s) | 1858, 3333, 3445 |
| MvaI | CCWGG | 5 cut(s) | 159, 1523, 1817, 3177, 3690 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 119, 152, 671, 889, 2094 |
| NcoI | CCATGG | 4 cut(s) | 646, 3131, 3313, 3758 |
| NdeI | CATATG | 2 cut(s) | 109, 3010 |
| NmuCI | GTSAC | 5 cut(s) | 542, 836, 2119, 2200, 2326 |
| NsiI | ATGCAT | 4 cut(s) | 411, 706, 2903, 3447 |
| NspI | RCATGY | 4 cut(s) | 669, 773, 1301, 1552 |
| PaeR7I | CTCGAG | 2 cut(s) | 2496, 3396 |
| PagI | TCATGA | 2 cut(s) | 1528, 1987 |
| PasI | CCCWGGG | 1 cut(s) | 1522 |
| PceI | AGGCCT | 2 cut(s) | 3538, 3598 |
| PciI | ACATGT | 1 cut(s) | 1297 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 2721 |
| PctI | GAATGC | 3 cut(s) | 1858, 3333, 3445 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1378, 3118 |
| PfeI | GAWTC | 9 cut(s) | 59, 713, 1619, 1706, 1994, 2021, 2159, 2288, 2972 |
| PflFI | GACNNNGTC | 1 cut(s) | 1393 |
| PfoI | TCCNGGA | 1 cut(s) | 1815 |
| PinAI | ACCGGT | 1 cut(s) | 3520 |
| PkrI | GCNGC | 5 cut(s) | 1000, 1351, 1407, 1479, 2647 |
| PleI | GAGTC | 8 cut(s) | 242, 549, 1094, 1402, 1429, 1457, 1843, 3351 |
| PpsI | GAGTC | 8 cut(s) | 242, 549, 1094, 1402, 1429, 1457, 1843, 3351 |
| PpuMI | RGGWCCY | 3 cut(s) | 1898, 2846, 3051 |
| PscI | ACATGT | 1 cut(s) | 1297 |
| PshAI | GACNNNNGTC | 1 cut(s) | 3315 |
| PsiI | TTATAA | 4 cut(s) | 2369, 2661, 2739, 3546 |
| Psp124BI | GAGCTC | 2 cut(s) | 1827, 2090 |
| Psp5II | RGGWCCY | 3 cut(s) | 1898, 2846, 3051 |
| Psp6I | CCWGG | 5 cut(s) | 157, 1521, 1815, 3175, 3688 |
| PspGI | CCWGG | 5 cut(s) | 157, 1521, 1815, 3175, 3688 |
| PspPPI | RGGWCCY | 3 cut(s) | 1898, 2846, 3051 |
| PspXI | VCTCGAGB | 1 cut(s) | 2496 |
| PstI | CTGCAG | 2 cut(s) | 1354, 2227 |
| PstNI | CAGNNNCTG | 1 cut(s) | 737 |
| PsuI | RGATCY | 6 cut(s) | 1214, 2008, 2980, 3152, 3224, 3391 |
| PsyI | GACNNNGTC | 1 cut(s) | 1393 |
| RsaI | GTAC | 8 cut(s) | 66, 1696, 1921, 2277, 2552, 2675, 2998, 3529 |
| RsaNI | GTAC | 8 cut(s) | 65, 1695, 1920, 2276, 2551, 2674, 2997, 3528 |
| RseI | CAYNNNNRTG | 1 cut(s) | 2694 |
| Rsr2I | CGGWCCG | 1 cut(s) | 3523 |
| RsrII | CGGWCCG | 1 cut(s) | 3523 |
| SacI | GAGCTC | 2 cut(s) | 1827, 2090 |
| SalI | GTCGAC | 1 cut(s) | 97 |
| SatI | GCNGC | 5 cut(s) | 999, 1350, 1406, 1478, 2646 |
| SchI | GAGTC | 8 cut(s) | 243, 550, 1095, 1403, 1429, 1457, 1844, 3352 |
| ScrFI | CCNGG | 5 cut(s) | 159, 1523, 1817, 3177, 3690 |
| SduI | GDGCHC | 4 cut(s) | 655, 1827, 2090, 2239 |
| SfaNI | GCATC | 8 cut(s) | 133, 438, 691, 715, 2072, 2167, 2888, 3248 |
| SfcI | CTRYAG | 6 cut(s) | 1350, 1725, 2205, 2223, 2530, 2976 |
| Sfr274I | CTCGAG | 2 cut(s) | 2496, 3396 |
| SlaI | CTCGAG | 2 cut(s) | 2496, 3396 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 2694 |
| SmlI | CTYRAG | 5 cut(s) | 372, 1238, 2496, 2821, 3396 |
| SmoI | CTYRAG | 5 cut(s) | 372, 1238, 2496, 2821, 3396 |
| SpeI | ACTAGT | 1 cut(s) | 125 |
| SseBI | AGGCCT | 2 cut(s) | 3538, 3598 |
| SsiI | CCGC | 6 cut(s) | 425, 2356, 2548, 2648, 3407, 3428 |
| SspI | AATATT | 2 cut(s) | 1123, 2017 |
| SstI | GAGCTC | 2 cut(s) | 1827, 2090 |
| StuI | AGGCCT | 2 cut(s) | 3538, 3598 |
| StyD4I | CCNGG | 5 cut(s) | 157, 1521, 1815, 3175, 3688 |
| StyI | CCWWGG | 8 cut(s) | 211, 646, 1010, 2215, 3131, 3313, 3593, 3758 |
| TaaI | ACNGT | 9 cut(s) | 229, 1060, 1162, 2615, 2678, 2813, 2832, 3304, 3551 |
| TaiI | ACGT | 4 cut(s) | 499, 2516, 2593, 2918 |
| TaqI | TCGA | 8 cut(s) | 98, 1592, 2380, 2497, 2724, 3082, 3193, 3397 |
| TatI | WGTACW | 2 cut(s) | 64, 2275 |
| TfiI | GAWTC | 9 cut(s) | 59, 713, 1619, 1706, 1994, 2021, 2159, 2288, 2972 |
| TscAI | CASTG | 7 cut(s) | 613, 757, 939, 1165, 1648, 2583, 3556 |
| TseFI | GTSAC | 5 cut(s) | 542, 836, 2119, 2200, 2326 |
| TseI | GCWGC | 5 cut(s) | 998, 1349, 1405, 1477, 2645 |
| Tsp45I | GTSAC | 5 cut(s) | 542, 836, 2119, 2200, 2326 |
| TspGWI | ACGGA | 1 cut(s) | 3515 |
| TspRI | CASTG | 7 cut(s) | 613, 757, 939, 1165, 1648, 2583, 3556 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1393 |
| XapI | RAATTY | 9 cut(s) | 135, 358, 580, 1199, 2454, 2572, 2581, 2881, 3736 |
| XceI | RCATGY | 4 cut(s) | 669, 773, 1301, 1552 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 702 |
| XhoI | CTCGAG | 2 cut(s) | 2496, 3396 |
| XmaJI | CCTAGG | 2 cut(s) | 1010, 3593 |
| XmiI | GTMKAC | 3 cut(s) | 98, 1265, 2815 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1378, 3118 |
| Zsp2I | ATGCAT | 4 cut(s) | 411, 706, 2903, 3447 |