Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr02

Orthogroup ID

OG0002344

Physical Location & Seq

Genomic Coordinates Forward (+)

9649418 .. 9654821

Gene Structure 5404 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD02G1119000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2139 bp

ATGGCAATAATATCTCCGCGAGGCTCCAACAAGTTCTTGCTATCTCGCCTCGGAGCCCTAATCACGCAACAGAAATTCGTCCACGCATTGTCTGAGGGAGGATTGCAATCTCAGGTTCACCCTAAAATGGTCCCGGACCAAGGTTTCATTGATATGTATAAGTGGAAAAAGATCGACGCGAGGGCCCTCGGGATAAAGCCCTCCATGATTTCGCATCCCTCTTGGATTGTGTTGAAACTTCTTCAGGCTGAAGGGTTTGAGGCCTACTTAGTGGGTGGATGTGTTAGAGACTTAATCCTTAAAAGGATACCTAAAGACTTCGATGTGATCACTACAGCTAATCTTAAAGAGATCAAGAAGAAATTTCATCGTGCAGATGTTGTTGGGCAACGGTTTCCTATATGCAGGGTGCATGTTAAAGGCACAGTCATTGAGGTATCAAGTTTTGAAACAGTGGCAAGAGATGCAGGAAAAAAGAAAGAGAAACAGAAAGATAATTTATCTTTTAGGCCGCCTGGCTGTGATAAGAAAGATTTCATCCGTTGGAAAAACAGCATGCATCGGGACTTCACTATTAACAGTTTATTCTTTGATCCTTTTACGAATAAGGTCTATGATTATGCCAATGGAATGGCGGACTTAAGGCACTTAAAGCTACGGACACTAGCCCCTGCCAAGTTGTCGTTTGAAGAGGATTGTGCAAGAATCTTGAGGGGCTTAAGAATTGCTGCTCGTCTGAGCTTGTCAATTTCAAAAGAAACTGAGACTGCAATGCATAAGCTTTCTTCATCCATTTTGAGTTTGAGTAAGTTCAGAAAAATGATGGAGATGGACTATATGCTTTCTTATGGAGCTGCTGAGGCGTCACTATGTTTGCTGTGGAGATTTGATCTGATCAGAATTCTGTTTCCCTTTCATGCAGCATACTTTGACCAACAGAGTGAAAACTTGAAAGGCGCTAAGAGTTCCTCGATGTTGATGAAATTATTCTCGAATATGGATAAAGTGGTTAGCTGTGATCGGCCTGGTCACTGCTCTTTATGGGTCGGACTGTTGGCATTTCACCTGGCGCTAGTCAATAATCCACAAGATGCTCTTGTAGTGTTGACTTTTGCTTCCGTTCTGTATCATGAAGAATGGGAAGAAGGTGTTAAATTTTCCAGAGACAATGCTGCGTCGATAGTTAAATATGTACCTGAGATCTCAGGCTCATGTGGATTTAAATCAGAGGAAGAACTTGCAAAACAAGTTTCCAAGTTAGCTTCTTTTATGCTAGATTATATTGCCGCTTTAGCTGCAACAAAAGATCCTGATGAATCAATGTCGAGATATCCTGTTTTGCCATTCTCTGAGTTGGCCTTTTTACCTAAGAATATGGCTAAACATGTTGCTGCAATTGTTGAAGTCCTGACCAACGACATCGAATATTACAATCAAGGAAGAAAGAATTTTGAGATTGATTACTACTCACTTGGGAAAGGTCATATGCGCGAGATTAGGTTTATTTTAGGAAAAGTTATTCTAGAAACCATGGACAGTGGGATTTTGAGAGCAAAGGAAGTCGTTAAGGGGAAGGAGGACAACTACCACCTGCAGCAGGATATCATTGACAAAAATTTCACTAAGGGTAGAAAACGTGCAACTGATGCCCCCGAAATAAAACAAGAGTTGTCCAAGAAACATAGGGTGAAAGTAGTTTTTGATCCAGATATGGCTACCGATAATCAAGAGGTTGTCGAAACAACTCAATCACCACAGAAGGAGTTGATTTCAGTTCTGGGAAATATGTTAGAGAAGAAAAAACGTCAGTTACCAGAAGAGGTGATTGAGAAAAAGCAAGAGCTTTCTGAGAATGATAAGTTCCAGATGAAGGAGAAGAAGAATACTAAGAAGTGTAATTCAAGTCAGGAGGAGACTATTAAGCTGGAAACTATGTTAGAGCAGAGAGGGTATCCTGTAACACGGAAAGTAATCCATGAGAAGGTTACAGAACTCAGACAAGAAACAGATGAGGAGAGAGGCAGTCCACCTCCCCTATCTTGTATTTTCAGCAGGGGTGTTGAGGAGATTCAGAAACGCAAACAAGTAGCAGAAAAGCCAATATCCAGTCTCCGTCGACTATCTAGTCTCTTCAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004652 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006139 GO:0006276 GO:0006378 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0016740 GO:0016772 GO:0016779 GO:0031123 GO:0031124 GO:0034641 GO:0043170 GO:0043412 GO:0043631 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0070566 GO:0071704 GO:0090304 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PolyA_pol PolyA_pol_RNAbd

Protein Analysis

713

Amino Acids

81.34

Weight (kDa)

9.24

Isoelectric Point (pI)

49.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PolyA_pol	PF01743	88 - 219	6.6e-24	Poly A polymerase head domain
PolyA_pol_RNAbd	PF12627	248 - 308	3.4e-12	Probable RNA and SrmB- binding site of polymerase A

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002344)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G17580
fragaria_vesca	FvH4_1g10510 FvH4_1g10510 FvH4_1g10510 FvH4_1g10510 FvH4_1g29700
malus_domestica	MD02G1119000.v1.1 MD15G1233000.v1.1
prunus_persica	Prupe.7G180900_v2.0.a1 Prupe.7G180900_v2.0.a1 Prupe.7G180900_v2.0.a1 Prupe.7G180900_v2.0.a1 Prupe.7G180900_v2.0.a1 Prupe.7G180900_v2.0.a1 Prupe.7G180900_v2.0.a1 Prupe.7G180900_v2.0.a1 Prupe.7G180900_v2.0.a1 Prupe.7G180900_v2.0.a1
pyrus_communis	pycom02g09260 pycom02g09270 pycom15g20750
rosa_chinensis	RchiOBHm_Chr2g0097411 RchiOBHm_Chr2g0097511 RchiOBHm_Chr3g0465401
rosa_laevigata	RLG00000016724
rosa_multiflora	Rmu_sc0001060.1_g000002 Rmu_sc0004220.1_g000008 Rmu_sc0011781.1_g000006
rosa_roxburghii	Rroxscaffold_2G00144710
rosa_rugosa	Rorug02G0066800 Rorug02G0066800 Rorug02G0066800
rosa_samantha	Rh2AG113200 Rh2BG116200 Rh2BG116300 Rh2CG118200 Rh2CG118300 Rh2DG117300 Rh3BG141600 Rh3CG142700 Rh3DG142700
rosa_wichuraiana	Rw2G008870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1599
AasI	GACNNNNNNGTC	1 cut(s)	2124
Acc36I	ACCTGC	1 cut(s)	1599
AccI	GTMKAC	1 cut(s)	2116
AccII	CGCG	3 cut(s)	19, 179, 1491
AciI	CCGC	4 cut(s)	17, 512, 635, 1287
AclWI	GGATC	3 cut(s)	587, 1301, 1697
AcsI	RAATTY	6 cut(s)	74, 362, 900, 1154, 1447, 1615
AcuI	CTGAAG	2 cut(s)	227, 270
AcyI	GRCGYC	1 cut(s)	863
AfaI	GTAC	1 cut(s)	1194
AfiI	CCNNNNNNNGG	5 cut(s)	127, 140, 1597, 1870, 1981
AflII	CTTAAG	2 cut(s)	640, 718
AflIII	ACRYGT	1 cut(s)	1384
AgsI	TTSAA	8 cut(s)	235, 449, 689, 753, 952, 1403, 1902, 2134
AjnI	CCWGG	3 cut(s)	514, 1024, 1065
Alw26I	GTCTC	6 cut(s)	282, 758, 1158, 1907, 2114, 2132
AlwI	GGATC	3 cut(s)	587, 1301, 1697
Ama87I	CYCGRG	1 cut(s)	188
AoxI	GGCC	5 cut(s)	183, 261, 509, 1022, 1356
ApaI	GGGCCC	1 cut(s)	187
ApeKI	GCWGC	7 cut(s)	728, 854, 920, 1172, 1295, 1391, 1594
ApoI	RAATTY	6 cut(s)	74, 362, 900, 1154, 1447, 1615
Asp700I	GAANNNNTTC	2 cut(s)	533, 986
AspLEI	GCGC	3 cut(s)	959, 1072, 1491
AspS9I	GGNCC	4 cut(s)	130, 136, 183, 184
AsuC2I	CCSGG	1 cut(s)	134
AsuHPI	GGTGA	5 cut(s)	110, 1055, 1699, 1743, 1834
AvaI	CYCGRG	1 cut(s)	188
AvaII	GGWCC	2 cut(s)	130, 136
BaeGI	GKGCMC	1 cut(s)	187
BanII	GRGCYC	2 cut(s)	58, 187
BbvCI	CCTCAGC	1 cut(s)	858
BbvI	GCAGC	7 cut(s)	715, 841, 932, 1159, 1282, 1378, 1606
BccI	CCATC	2 cut(s)	817, 823
BciT130I	CCWGG	3 cut(s)	516, 1026, 1067
BciVI	GTATCC	2 cut(s)	300, 1962
BclI	TGATCA	2 cut(s)	327, 894
BcnI	CCSGG	1 cut(s)	134
BcoDI	GTCTC	6 cut(s)	282, 758, 1158, 1907, 2114, 2132
BfaI	CTAG	5 cut(s)	665, 1073, 1274, 1523, 2124
BfmI	CTRYAG	2 cut(s)	333, 1592
BfoI	RGCGCY	2 cut(s)	960, 1073
BfrI	CTTAAG	2 cut(s)	640, 718
BfuAI	ACCTGC	1 cut(s)	1599
BfuI	GTATCC	2 cut(s)	300, 1962
BglII	AGATCT	1 cut(s)	1200
BisI	GCNGC	9 cut(s)	512, 729, 855, 921, 1173, 1287, 1296, 1392, 1595
BlsI	GCNGC	9 cut(s)	513, 730, 856, 922, 1174, 1288, 1297, 1393, 1596
Bme1390I	CCNGG	4 cut(s)	134, 516, 1026, 1067
Bme18I	GGWCC	2 cut(s)	130, 136
BmeT110I	CYCGRG	1 cut(s)	188
BmgT120I	GGNCC	4 cut(s)	130, 136, 183, 184
BmiI	GGNNCC	4 cut(s)	25, 55, 132, 185
BmrFI	CCNGG	4 cut(s)	134, 516, 1026, 1067
BmsI	GCATC	5 cut(s)	223, 454, 568, 1081, 1636
Bpu10I	CCTNAGC	1 cut(s)	858
BpuEI	CTTGAG	1 cut(s)	730
BpuMI	CCSGG	1 cut(s)	134
BsaBI	GATNNNNATC	2 cut(s)	106, 1222
BsaHI	GRCGYC	1 cut(s)	863
BsaJI	CCNNGG	4 cut(s)	49, 139, 187, 1530
Bsc4I	CCNNNNNNNGG	5 cut(s)	127, 140, 1597, 1870, 1981
Bse1I	ACTGG	1 cut(s)	2106
Bse3DI	GCAATG	1 cut(s)	777
Bse8I	GATNNNNATC	2 cut(s)	106, 1222
BseBI	CCWGG	3 cut(s)	516, 1026, 1067
BseDI	CCNNGG	4 cut(s)	49, 139, 187, 1530
BseGI	GGATG	4 cut(s)	214, 284, 537, 788
BseJI	GATNNNNATC	2 cut(s)	106, 1222
BseLI	CCNNNNNNNGG	5 cut(s)	127, 140, 1597, 1870, 1981
BseMI	GCAATG	1 cut(s)	777
BseNI	ACTGG	1 cut(s)	2106
BseRI	GAGGAG	3 cut(s)	1925, 2027, 2078
BseSI	GKGCMC	1 cut(s)	187
BseXI	GCAGC	7 cut(s)	715, 841, 932, 1159, 1282, 1378, 1606
BsgI	GTGCAG	1 cut(s)	393
Bsh1236I	CGCG	3 cut(s)	19, 179, 1491
BshFI	GGCC	5 cut(s)	185, 263, 511, 1024, 1358
BsiHKCI	CYCGRG	1 cut(s)	188
BsiSI	CCGG	1 cut(s)	134
BslFI	GGGAC	2 cut(s)	116, 578
BslI	CCNNNNNNNGG	5 cut(s)	127, 140, 1597, 1870, 1981
BsmAI	GTCTC	6 cut(s)	282, 758, 1158, 1907, 2114, 2132
BsmFI	GGGAC	2 cut(s)	116, 578
BsnI	GGCC	5 cut(s)	185, 263, 511, 1024, 1358
BsoBI	CYCGRG	1 cut(s)	188
Bsp120I	GGGCCC	1 cut(s)	183
Bsp1286I	GDGCHC	2 cut(s)	58, 187
Bsp19I	CCATGG	1 cut(s)	1530
BspACI	CCGC	4 cut(s)	17, 512, 635, 1287
BspANI	GGCC	5 cut(s)	185, 263, 511, 1024, 1358
BspFNI	CGCG	3 cut(s)	19, 179, 1491
BspHI	TCATGA	1 cut(s)	1129
BspLI	GGNNCC	4 cut(s)	25, 55, 132, 185
BspMAI	CTGCAG	1 cut(s)	1596
BspMI	ACCTGC	1 cut(s)	1599
BspPI	GGATC	3 cut(s)	587, 1301, 1697
BspTI	CTTAAG	2 cut(s)	640, 718
BsrDI	GCAATG	1 cut(s)	777
BsrI	ACTGG	1 cut(s)	2106
BssECI	CCNNGG	4 cut(s)	49, 139, 187, 1530
BssNI	GRCGYC	1 cut(s)	863
BssT1I	CCWWGG	2 cut(s)	139, 1530
Bst2UI	CCWGG	3 cut(s)	516, 1026, 1067
Bst4CI	ACNGT	6 cut(s)	393, 427, 454, 581, 1053, 1538
Bst6I	CTCTTC	3 cut(s)	684, 1812, 2135
BstACI	GRCGYC	1 cut(s)	863
BstAFI	CTTAAG	2 cut(s)	640, 718
BstAPI	GCANNNNNTGC	2 cut(s)	464, 1646
BstC8I	GCNNGC	1 cut(s)	557
BstDSI	CCRYGG	1 cut(s)	1530
BstENI	CCTNNNNNAGG	1 cut(s)	1595
BstF5I	GGATG	4 cut(s)	214, 284, 537, 788
BstFNI	CGCG	3 cut(s)	19, 179, 1491
BstH2I	RGCGCY	2 cut(s)	960, 1073
BstHHI	GCGC	3 cut(s)	959, 1072, 1491
BstMAI	GTCTC	6 cut(s)	282, 758, 1158, 1907, 2114, 2132
BstMWI	GCNNNNNNNGC	6 cut(s)	464, 652, 860, 1292, 1295, 1646
BstNI	CCWGG	3 cut(s)	516, 1026, 1067
BstNSI	RCATGY	3 cut(s)	416, 559, 1388
BstSCI	CCNGG	4 cut(s)	132, 514, 1024, 1065
BstSFI	CTRYAG	2 cut(s)	333, 1592
BstSLI	GKGCMC	1 cut(s)	187
BstUI	CGCG	3 cut(s)	19, 179, 1491
BstV1I	GCAGC	7 cut(s)	715, 841, 932, 1159, 1282, 1378, 1606
BstX2I	RGATCY	2 cut(s)	1200, 1306
BstXI	CCANNNNNNTGG	1 cut(s)	631
BstYI	RGATCY	2 cut(s)	1200, 1306
BsuI	GTATCC	2 cut(s)	300, 1962
BsuRI	GGCC	5 cut(s)	185, 263, 511, 1024, 1358
BtgI	CCRYGG	1 cut(s)	1530
BtsCI	GGATG	4 cut(s)	214, 284, 537, 788
BtsI	GCAGTG	1 cut(s)	1030
BtsIMutI	CAGTG	3 cut(s)	459, 1030, 1543
BveI	ACCTGC	1 cut(s)	1599
Cac8I	GCNNGC	1 cut(s)	557
CciI	TCATGA	1 cut(s)	1129
CfoI	GCGC	3 cut(s)	959, 1072, 1491
Cfr13I	GGNCC	4 cut(s)	130, 136, 183, 184
CseI	GACGC	3 cut(s)	185, 852, 1164
Csp6I	GTAC	1 cut(s)	1193
CviAII	CATG	9 cut(s)	205, 413, 556, 917, 1130, 1212, 1385, 1531, 1976
CviQI	GTAC	1 cut(s)	1193
DraI	TTTAAA	1 cut(s)	1222
DrdI	GACNNNNNNGTC	1 cut(s)	2124
DseDI	GACNNNNNNGTC	1 cut(s)	2124
Eam1104I	CTCTTC	3 cut(s)	684, 1812, 2135
EarI	CTCTTC	3 cut(s)	684, 1812, 2135
EciI	GGCGGA	1 cut(s)	650
Eco130I	CCWWGG	2 cut(s)	139, 1530
Eco147I	AGGCCT	1 cut(s)	263
Eco24I	GRGCYC	2 cut(s)	58, 187
Eco32I	GATATC	2 cut(s)	1331, 1603
Eco47I	GGWCC	2 cut(s)	130, 136
Eco57I	CTGAAG	2 cut(s)	227, 270
Eco88I	CYCGRG	1 cut(s)	188
EcoNI	CCTNNNNNAGG	1 cut(s)	1595
EcoO109I	RGGNCCY	2 cut(s)	183, 184
EcoRI	GAATTC	1 cut(s)	900
EcoRII	CCWGG	3 cut(s)	514, 1024, 1065
EcoRV	GATATC	2 cut(s)	1331, 1603
EcoT14I	CCWWGG	2 cut(s)	139, 1530
EcoT22I	ATGCAT	2 cut(s)	561, 777
EcoT38I	GRGCYC	2 cut(s)	58, 187
ErhI	CCWWGG	2 cut(s)	139, 1530
FaeI	CATG	9 cut(s)	208, 416, 559, 920, 1133, 1215, 1388, 1534, 1979
FalI	AAGNNNNNCTT	2 cut(s)	1080, 1112
FaqI	GGGAC	2 cut(s)	116, 578
FatI	CATG	9 cut(s)	204, 412, 555, 916, 1129, 1211, 1384, 1530, 1975
FauNDI	CATATG	1 cut(s)	1485
FbaI	TGATCA	2 cut(s)	327, 894
FblI	GTMKAC	1 cut(s)	2116
Fnu4HI	GCNGC	9 cut(s)	512, 729, 855, 921, 1173, 1287, 1296, 1392, 1595
FokI	GGATG	4 cut(s)	201, 291, 524, 775
FriOI	GRGCYC	2 cut(s)	58, 187
Fsp4HI	GCNGC	9 cut(s)	512, 729, 855, 921, 1173, 1287, 1296, 1392, 1595
FspBI	CTAG	5 cut(s)	665, 1073, 1274, 1523, 2124
GlaI	GCGC	3 cut(s)	958, 1071, 1490
GluI	GCNGC	9 cut(s)	512, 729, 855, 921, 1173, 1287, 1296, 1392, 1595
HaeII	RGCGCY	2 cut(s)	960, 1073
HaeIII	GGCC	5 cut(s)	185, 263, 511, 1024, 1358
HapII	CCGG	1 cut(s)	134
HgaI	GACGC	3 cut(s)	185, 852, 1164
HhaI	GCGC	3 cut(s)	959, 1072, 1491
Hin1I	GRCGYC	1 cut(s)	863
Hin1II	CATG	9 cut(s)	208, 416, 559, 920, 1133, 1215, 1388, 1534, 1979
Hin6I	GCGC	3 cut(s)	957, 1070, 1489
HinP1I	GCGC	3 cut(s)	957, 1070, 1489
HincII	GTYRAC	2 cut(s)	1107, 2117
HindII	GTYRAC	2 cut(s)	1107, 2117
HindIII	AAGCTT	1 cut(s)	779
HinfI	GANTC	3 cut(s)	705, 1316, 2068
HpaII	CCGG	1 cut(s)	134
HphI	GGTGA	5 cut(s)	110, 1055, 1699, 1743, 1834
Hpy166II	GTNNAC	5 cut(s)	82, 118, 1107, 2027, 2117
Hpy8I	GTNNAC	5 cut(s)	82, 118, 1107, 2027, 2117
Hpy99I	CGWCG	3 cut(s)	179, 1180, 2118
HpyAV	CCTTC	6 cut(s)	245, 1139, 1567, 1753, 1864, 1975
HpyCH4III	ACNGT	6 cut(s)	393, 427, 454, 581, 1053, 1538
HpyCH4IV	ACGT	2 cut(s)	1636, 1804
HpyF10VI	GCNNNNNNNGC	6 cut(s)	464, 652, 860, 1292, 1295, 1646
HpySE526I	ACGT	2 cut(s)	1636, 1804
Hsp92I	GRCGYC	1 cut(s)	863
Hsp92II	CATG	9 cut(s)	208, 416, 559, 920, 1133, 1215, 1388, 1534, 1979
HspAI	GCGC	3 cut(s)	957, 1070, 1489
Ksp22I	TGATCA	2 cut(s)	327, 894
LmnI	GCTCC	3 cut(s)	29, 53, 851
Lsp1109I	GCAGC	7 cut(s)	715, 841, 932, 1159, 1282, 1378, 1606
LweI	GCATC	5 cut(s)	223, 454, 568, 1081, 1636
MaeI	CTAG	5 cut(s)	665, 1073, 1274, 1523, 2124
MaeII	ACGT	2 cut(s)	1636, 1804
MaeIII	GTNAC	5 cut(s)	864, 1028, 1809, 1957, 1984
MfeI	CAATTG	1 cut(s)	1395
MflI	RGATCY	2 cut(s)	1200, 1306
MhlI	GDGCHC	2 cut(s)	58, 187
MmeI	TCCRAC	3 cut(s)	51, 524, 1027
Mph1103I	ATGCAT	2 cut(s)	561, 777
MroXI	GAANNNNTTC	2 cut(s)	533, 986
MslI	CAYNNNNRTG	1 cut(s)	152
MspCI	CTTAAG	2 cut(s)	640, 718
MspI	CCGG	1 cut(s)	134
MspR9I	CCNGG	4 cut(s)	134, 516, 1026, 1067
MunI	CAATTG	1 cut(s)	1395
MvaI	CCWGG	3 cut(s)	516, 1026, 1067
MvnI	CGCG	3 cut(s)	19, 179, 1491
MwoI	GCNNNNNNNGC	6 cut(s)	464, 652, 860, 1292, 1295, 1646
NciI	CCSGG	1 cut(s)	134
NcoI	CCATGG	1 cut(s)	1530
NdeI	CATATG	1 cut(s)	1485
NlaIII	CATG	9 cut(s)	208, 416, 559, 920, 1133, 1215, 1388, 1534, 1979
NlaIV	GGNNCC	4 cut(s)	25, 55, 132, 185
NmuCI	GTSAC	2 cut(s)	864, 1028
NsiI	ATGCAT	2 cut(s)	561, 777
NspI	RCATGY	3 cut(s)	416, 559, 1388
PaeI	GCATGC	1 cut(s)	559
PagI	TCATGA	1 cut(s)	1129
PaqCI	CACCTGC	1 cut(s)	1599
PceI	AGGCCT	1 cut(s)	263
PciI	ACATGT	1 cut(s)	1384
PdmI	GAANNNNTTC	2 cut(s)	533, 986
PfeI	GAWTC	3 cut(s)	705, 1316, 2068
PfoI	TCCNGGA	1 cut(s)	132
PkrI	GCNGC	9 cut(s)	513, 730, 856, 922, 1174, 1288, 1297, 1393, 1596
PscI	ACATGT	1 cut(s)	1384
Psp6I	CCWGG	3 cut(s)	514, 1024, 1065
PspGI	CCWGG	3 cut(s)	514, 1024, 1065
PspN4I	GGNNCC	4 cut(s)	25, 55, 132, 185
PspOMI	GGGCCC	1 cut(s)	183
PspPI	GGNCC	4 cut(s)	130, 136, 183, 184
PstI	CTGCAG	1 cut(s)	1596
PsuI	RGATCY	2 cut(s)	1200, 1306
RsaI	GTAC	1 cut(s)	1194
RsaNI	GTAC	1 cut(s)	1193
RseI	CAYNNNNRTG	1 cut(s)	152
SalI	GTCGAC	1 cut(s)	2115
SatI	GCNGC	9 cut(s)	512, 729, 855, 921, 1173, 1287, 1296, 1392, 1595
Sau96I	GGNCC	4 cut(s)	130, 136, 183, 184
ScrFI	CCNGG	4 cut(s)	134, 516, 1026, 1067
SduI	GDGCHC	2 cut(s)	58, 187
SfaNI	GCATC	5 cut(s)	223, 454, 568, 1081, 1636
SfcI	CTRYAG	2 cut(s)	333, 1592
SinI	GGWCC	2 cut(s)	130, 136
SmiI	ATTTAAAT	1 cut(s)	1222
SmiMI	CAYNNNNRTG	1 cut(s)	152
SmlI	CTYRAG	3 cut(s)	640, 709, 718
SmoI	CTYRAG	3 cut(s)	640, 709, 718
SphI	GCATGC	1 cut(s)	559
SseBI	AGGCCT	1 cut(s)	263
SsiI	CCGC	4 cut(s)	17, 512, 635, 1287
SspI	AATATT	1 cut(s)	1427
SspMI	CTAG	5 cut(s)	665, 1073, 1274, 1523, 2124
StuI	AGGCCT	1 cut(s)	263
StyD4I	CCNGG	4 cut(s)	132, 514, 1024, 1065
StyI	CCWWGG	2 cut(s)	139, 1530
SwaI	ATTTAAAT	1 cut(s)	1222
TaaI	ACNGT	6 cut(s)	393, 427, 454, 581, 1053, 1538
TaiI	ACGT	2 cut(s)	1639, 1807
TaqI	TCGA	9 cut(s)	174, 321, 971, 992, 1178, 1325, 1422, 1737, 2116
TauI	GCSGC	2 cut(s)	514, 1289
TfiI	GAWTC	3 cut(s)	705, 1316, 2068
TscAI	CASTG	3 cut(s)	459, 1037, 1543
TseFI	GTSAC	2 cut(s)	864, 1028
TseI	GCWGC	7 cut(s)	728, 854, 920, 1172, 1295, 1391, 1594
Tsp45I	GTSAC	2 cut(s)	864, 1028
TspDTI	ATGAA	9 cut(s)	136, 356, 526, 777, 905, 995, 1146, 1329, 1883
TspGWI	ACGGA	5 cut(s)	530, 673, 1108, 1978, 2102
TspRI	CASTG	3 cut(s)	459, 1037, 1543
Vha464I	CTTAAG	2 cut(s)	640, 718
VpaK11BI	GGWCC	2 cut(s)	130, 136
XagI	CCTNNNNNAGG	1 cut(s)	1595
XapI	RAATTY	6 cut(s)	74, 362, 900, 1154, 1447, 1615
XbaI	TCTAGA	1 cut(s)	1522
XceI	RCATGY	3 cut(s)	416, 559, 1388
XmiI	GTMKAC	1 cut(s)	2116
XmnI	GAANNNNTTC	2 cut(s)	533, 986
XspI	CTAG	5 cut(s)	665, 1073, 1274, 1523, 2124
Zsp2I	ATGCAT	2 cut(s)	561, 777

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.