Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001060.1

Orthogroup ID

OG0002344

Physical Location & Seq

Genomic Coordinates Reverse (-)

3273 .. 8584

Gene Structure 5312 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001060.1_g000002.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2034 bp

atggcgataacacccctcagaggcaacaatcacttgttatctcgcctcaaactccttcttaaccagcaacagagactcgcccacacgctctccgaaggccctcagtcccgccctaaaatggttcctgagtcggtccatgaagaggggttgattgacatgtcgaaatggagaaaggtggattccagggtgtttgggataacacggtccatgattcccgagtcatcttggaacgtcttgagaatacttcgaagggaagggtttgaagcctacttagtgggcggatgtgtgagggacttgatcctgaaaagaattcctaaagactttgatgtgatcactacagctaatcttaagcagatcaagaggcagttccatcgtgcacaaatcgtcggacaacgatttcctatatgtatggtgcatattaaaggttctgtcatagaggtatccagttttgaaacggtggcaaaagcaaaacactctgataaagaagttactttctctcaaatgccaaagggctgtgataagaaagatttcatacgctggagaaacagcatgcatcgagacttcacaattaacagcagtttgttcttcgatcctttatcaaataaaatctttgattatgcaaatggcatggcggatttgagatcctcaaagctacggtcgttaggctccgccaagttgtcgtttaaagaggactgcgcaagaattttacgtggcttaagaattgctgctcgtctgagtttgaaaatttcaaaagaaaccgagacagctatacataagttttcttcatccattttgacattggcaacgagtagaattatgatggaaatgaactatatgctttcttatggagctgctgagccatctctctgtctgctttgggaattcaatctactcagagttctacttccaattcatgcagcatacttggatgaacagaggattaggaagtttcctcagaattccacgatgttgatgaaactattctttaatttggataaagttgtcacggttgatcgaccttctgactgcagtttatgggtagctctgttggcttttcacatggcactggtcagtcaccctcaagacgctcttgtggtgttcacctttgcttctgtcctgtatcatgggggatgcaaaaagggtcttacatttgctagagacaatgctcaagtgatagttgactatctaccagagatctcaagttcatctgcatgtaaatcagaggaagagcttgaaaaagaagtttccttattggcctctcttgttttagattctattgctgctctaactgcaactgagagtcttgtcgaaacgatgtctaagtatcctgaatctccatgctctggattggtatttgtaccaaagaaaacggcccaaggtgttgctgaaatttttagagttctggtcgacgacatcaaatcttacaatagagaaagaaaaagttatgaaattgattaccctgtacttaggaaaggttttctgcacgagacaagatttgtgcttggcaaaattattttagaaaccatgagcagtagtattctgaaaggggaggaatttgttcaggaggactaccgacacctggagcaggagagcattacggaaaattgcaataagggtaaaaaacgtggccttaaacctgatactcctaaactaaaacaagagtttgtgaagaaacacaagttggtcgaaaggaaatgcagaccgttggagcaagagatggacattgataaccaagatggtgtaatattatcacaattggtttcagttccgagacataatgtagagaaggaaacatggcagttacctgaagagaaggtgataaagaaaaaacataaggcaacgaagcagcagtgtgtaccatgggatgaggcaacgaagcagcaactaaagacagttgagaagaataatgacaaggagaatgaccgtctatctagtctcttgagcggtgagaagatacagaaacgcaaagaagtaccagacgagggggagaaaagcagtcaacttcgactgtctagtctcttcaagaaaacataa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004652 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006139 GO:0006276 GO:0006378 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0016740 GO:0016772 GO:0016779 GO:0031123 GO:0031124 GO:0034641 GO:0043170 GO:0043412 GO:0043631 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0070566 GO:0071704 GO:0090304 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PolyA_pol PolyA_pol_RNAbd

Protein Analysis

677

Amino Acids

77.42

Weight (kDa)

9.31

Isoelectric Point (pI)

50.03

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002344)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G17580
fragaria_vesca	FvH4_1g10510 FvH4_1g10510 FvH4_1g10510 FvH4_1g10510 FvH4_1g29700
malus_domestica	MD02G1119000.v1.1 MD15G1233000.v1.1
prunus_persica	Prupe.7G180900_v2.0.a1 Prupe.7G180900_v2.0.a1 Prupe.7G180900_v2.0.a1 Prupe.7G180900_v2.0.a1 Prupe.7G180900_v2.0.a1 Prupe.7G180900_v2.0.a1 Prupe.7G180900_v2.0.a1 Prupe.7G180900_v2.0.a1 Prupe.7G180900_v2.0.a1 Prupe.7G180900_v2.0.a1
pyrus_communis	pycom02g09260 pycom02g09270 pycom15g20750
rosa_chinensis	RchiOBHm_Chr2g0097411 RchiOBHm_Chr2g0097511 RchiOBHm_Chr3g0465401
rosa_laevigata	RLG00000016724
rosa_multiflora	Rmu_sc0001060.1_g000002 Rmu_sc0004220.1_g000008 Rmu_sc0011781.1_g000006
rosa_roxburghii	Rroxscaffold_2G00144710
rosa_rugosa	Rorug02G0066800 Rorug02G0066800 Rorug02G0066800
rosa_samantha	Rh2AG113200 Rh2BG116200 Rh2BG116300 Rh2CG118200 Rh2CG118300 Rh2DG117300 Rh3BG141600 Rh3CG142700 Rh3DG142700
rosa_wichuraiana	Rw2G008870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	2013
Acc16I	TGCGCA	1 cut(s)	697
AccB7I	CCANNNNNTGG	1 cut(s)	1343
AccBSI	CCGCTC	1 cut(s)	1944
AccI	GTMKAC	1 cut(s)	1407
AciI	CCGC	5 cut(s)	109, 279, 632, 669, 1944
AclWI	GGATC	3 cut(s)	292, 584, 636
AcsI	RAATTY	7 cut(s)	309, 702, 744, 881, 958, 1389, 1553
AcuI	CTGAAG	1 cut(s)	1827
AfaI	GTAC	4 cut(s)	1359, 1464, 1857, 1974
AfiI	CCNNNNNNNGG	7 cut(s)	20, 118, 142, 1343, 1579, 1585, 1982
AflII	CTTAAG	2 cut(s)	347, 715
AflIII	ACRYGT	1 cut(s)	156
AgsI	TTSAA	7 cut(s)	263, 452, 742, 750, 886, 1235, 2023
AjnI	CCWGG	2 cut(s)	182, 1578
AjuI	GAANNNNNNNTTGG	2 cut(s)	1664, 1696
AluBI	AGCT	6 cut(s)	341, 652, 767, 851, 1043, 1231
AluI	AGCT	6 cut(s)	341, 652, 767, 851, 1043, 1231
Alw21I	GWGCWC	1 cut(s)	379
Alw26I	GTCTC	8 cut(s)	67, 552, 755, 1152, 1481, 1765, 1940, 2021
Alw44I	GTGCAC	1 cut(s)	375
AlwI	GGATC	3 cut(s)	292, 584, 636
Ama87I	CYCGRG	1 cut(s)	215
AoxI	GGCC	4 cut(s)	97, 1254, 1371, 1627
ApaLI	GTGCAC	1 cut(s)	375
ApeKI	GCWGC	6 cut(s)	725, 851, 917, 1280, 1846, 1879
ApoI	RAATTY	7 cut(s)	309, 702, 744, 881, 958, 1389, 1553
ArsI	GACNNNNNNTTYG	2 cut(s)	641, 673
Asp700I	GAANNNNTTC	3 cut(s)	527, 980, 1557
AspLEI	GCGC	1 cut(s)	698
AspS9I	GGNCC	4 cut(s)	98, 133, 204, 1372
AsuHPI	GGTGA	4 cut(s)	1067, 1093, 1828, 1958
AsuII	TTCGAA	1 cut(s)	247
AvaI	CYCGRG	1 cut(s)	215
AvaII	GGWCC	2 cut(s)	133, 204
BaeGI	GKGCMC	1 cut(s)	379
BauI	CACGAG	1 cut(s)	1484
Bbv12I	GWGCWC	1 cut(s)	379
BbvI	GCAGC	6 cut(s)	712, 838, 929, 1267, 1858, 1891
BccI	CCATC	5 cut(s)	378, 814, 868, 1711, 1730
BceAI	ACGGC	1 cut(s)	1386
BcgI	CGANNNNNNTGC	2 cut(s)	353, 387
BciT130I	CCWGG	2 cut(s)	184, 1580
BciVI	GTATCC	2 cut(s)	451, 1335
BclI	TGATCA	1 cut(s)	330
BcoDI	GTCTC	8 cut(s)	67, 552, 755, 1152, 1481, 1765, 1940, 2021
BfaI	CTAG	3 cut(s)	1155, 1932, 2013
BfmI	CTRYAG	2 cut(s)	336, 1027
BfrI	CTTAAG	2 cut(s)	347, 715
BfuI	GTATCC	2 cut(s)	451, 1335
BglII	AGATCT	1 cut(s)	1194
BisI	GCNGC	6 cut(s)	726, 852, 918, 1281, 1847, 1880
BlpI	GCTNAGC	1 cut(s)	855
BlsI	GCNGC	6 cut(s)	727, 853, 919, 1282, 1848, 1881
Bme1390I	CCNGG	2 cut(s)	184, 1580
Bme18I	GGWCC	2 cut(s)	133, 204
BmeT110I	CYCGRG	1 cut(s)	215
BmgT120I	GGNCC	4 cut(s)	98, 133, 204, 1372
BmiI	GGNNCC	2 cut(s)	123, 667
BmrFI	CCNGG	2 cut(s)	184, 1580
BmsI	GCATC	2 cut(s)	562, 1121
BpmI	CTGGAG	2 cut(s)	559, 1601
Bpu1102I	GCTNAGC	1 cut(s)	855
Bpu14I	TTCGAA	1 cut(s)	247
BpuEI	CTTGAG	5 cut(s)	256, 1065, 1152, 1183, 1960
BsaAI	YACGTR	1 cut(s)	710
BsaJI	CCNNGG	3 cut(s)	183, 1375, 1859
BsaXI	ACNNNNNCTCC	2 cut(s)	74, 104
Bsc4I	CCNNNNNNNGG	7 cut(s)	20, 118, 142, 1343, 1579, 1585, 1982
Bse1I	ACTGG	2 cut(s)	444, 1071
BseBI	CCWGG	2 cut(s)	184, 1580
BseDI	CCNNGG	3 cut(s)	183, 1375, 1859
BseGI	GGATG	5 cut(s)	287, 785, 934, 1136, 1870
BseLI	CCNNNNNNNGG	7 cut(s)	20, 118, 142, 1343, 1579, 1585, 1982
BseMII	CTCAG	8 cut(s)	31, 116, 117, 725, 846, 907, 968, 1287
BseNI	ACTGG	2 cut(s)	444, 1071
BseSI	GKGCMC	1 cut(s)	379
BseXI	GCAGC	6 cut(s)	712, 838, 929, 1267, 1858, 1891
BsgI	GTGCAG	1 cut(s)	1466
Bsh1285I	CGRYCG	1 cut(s)	659
BshFI	GGCC	4 cut(s)	99, 1256, 1373, 1629
BsiEI	CGRYCG	1 cut(s)	659
BsiHKAI	GWGCWC	1 cut(s)	379
BsiHKCI	CYCGRG	1 cut(s)	215
BslFI	GGGAC	2 cut(s)	91, 305
BslI	CCNNNNNNNGG	7 cut(s)	20, 118, 142, 1343, 1579, 1585, 1982
BsmAI	GTCTC	8 cut(s)	67, 552, 755, 1152, 1481, 1765, 1940, 2021
BsmFI	GGGAC	2 cut(s)	91, 305
BsnI	GGCC	4 cut(s)	99, 1256, 1373, 1629
BsoBI	CYCGRG	1 cut(s)	215
Bsp119I	TTCGAA	1 cut(s)	247
Bsp1286I	GDGCHC	1 cut(s)	379
Bsp143I	GATC	7 cut(s)	297, 330, 354, 589, 641, 1012, 1194
Bsp1720I	GCTNAGC	1 cut(s)	855
Bsp19I	CCATGG	1 cut(s)	1859
BspACI	CCGC	5 cut(s)	109, 279, 632, 669, 1944
BspANI	GGCC	4 cut(s)	99, 1256, 1373, 1629
BspCNI	CTCAG	8 cut(s)	30, 115, 118, 726, 847, 906, 967, 1288
BspLI	GGNNCC	2 cut(s)	123, 667
BspMAI	CTGCAG	1 cut(s)	1031
BspPI	GGATC	3 cut(s)	292, 584, 636
BspQI	GCTCTTC	1 cut(s)	1221
BspT104I	TTCGAA	1 cut(s)	247
BspTI	CTTAAG	2 cut(s)	347, 715
BsrBI	CCGCTC	1 cut(s)	1944
BsrI	ACTGG	2 cut(s)	444, 1071
BssECI	CCNNGG	3 cut(s)	183, 1375, 1859
BssMI	GATC	7 cut(s)	297, 330, 354, 589, 641, 1012, 1194
BssSI	CACGAG	1 cut(s)	1484
BssT1I	CCWWGG	2 cut(s)	1375, 1859
Bst2BI	CACGAG	1 cut(s)	1484
Bst2UI	CCWGG	2 cut(s)	184, 1580
Bst4CI	ACNGT	8 cut(s)	204, 457, 657, 1009, 1704, 1894, 1925, 2010
Bst6I	CTCTTC	4 cut(s)	135, 1221, 1803, 2024
BstAFI	CTTAAG	2 cut(s)	347, 715
BstBAI	YACGTR	1 cut(s)	710
BstBI	TTCGAA	1 cut(s)	247
BstC8I	GCNNGC	1 cut(s)	551
BstDSI	CCRYGG	1 cut(s)	1859
BstENI	CCTNNNNNAGG	1 cut(s)	1583
BstF5I	GGATG	5 cut(s)	287, 785, 934, 1136, 1870
BstHHI	GCGC	1 cut(s)	698
BstKTI	GATC	7 cut(s)	300, 333, 357, 592, 644, 1015, 1197
BstMAI	GTCTC	8 cut(s)	67, 552, 755, 1152, 1481, 1765, 1940, 2021
BstMBI	GATC	7 cut(s)	297, 330, 354, 589, 641, 1012, 1194
BstMCI	CGRYCG	1 cut(s)	659
BstMWI	GCNNNNNNNGC	2 cut(s)	1049, 1289
BstNI	CCWGG	2 cut(s)	184, 1580
BstNSI	RCATGY	3 cut(s)	160, 553, 1215
BstSCI	CCNGG	2 cut(s)	182, 1578
BstSFI	CTRYAG	2 cut(s)	336, 1027
BstSLI	GKGCMC	1 cut(s)	379
BstV1I	GCAGC	6 cut(s)	712, 838, 929, 1267, 1858, 1891
BstX2I	RGATCY	2 cut(s)	641, 1194
BstYI	RGATCY	2 cut(s)	641, 1194
BsuI	GTATCC	2 cut(s)	451, 1335
BsuRI	GGCC	4 cut(s)	99, 1256, 1373, 1629
BtgI	CCRYGG	1 cut(s)	1859
BtsCI	GGATG	5 cut(s)	287, 785, 934, 1136, 1870
BtsI	GCAGTG	1 cut(s)	1856
BtsIMutI	CAGTG	2 cut(s)	1064, 1856
Cac8I	GCNNGC	1 cut(s)	551
CfoI	GCGC	1 cut(s)	698
Cfr13I	GGNCC	4 cut(s)	98, 133, 204, 1372
CseI	GACGC	1 cut(s)	1094
Csp6I	GTAC	4 cut(s)	1358, 1463, 1856, 1973
CviQI	GTAC	4 cut(s)	1358, 1463, 1856, 1973
DpnI	GATC	7 cut(s)	299, 332, 356, 591, 643, 1014, 1196
DpnII	GATC	7 cut(s)	297, 330, 354, 589, 641, 1012, 1194
DraI	TTTAAA	1 cut(s)	685
DrdI	GACNNNNNNGTC	1 cut(s)	2013
DseDI	GACNNNNNNGTC	1 cut(s)	2013
Eam1104I	CTCTTC	4 cut(s)	135, 1221, 1803, 2024
EarI	CTCTTC	4 cut(s)	135, 1221, 1803, 2024
EciI	GGCGGA	3 cut(s)	294, 647, 658
Eco130I	CCWWGG	2 cut(s)	1375, 1859
Eco47I	GGWCC	2 cut(s)	133, 204
Eco57I	CTGAAG	1 cut(s)	1827
Eco88I	CYCGRG	1 cut(s)	215
EcoNI	CCTNNNNNAGG	1 cut(s)	1583
EcoO109I	RGGNCCY	1 cut(s)	98
EcoRI	GAATTC	3 cut(s)	309, 881, 958
EcoRII	CCWGG	2 cut(s)	182, 1578
EcoT14I	CCWWGG	2 cut(s)	1375, 1859
EcoT22I	ATGCAT	1 cut(s)	555
ErhI	CCWWGG	2 cut(s)	1375, 1859
FalI	AAGNNNNNCTT	2 cut(s)	1074, 1106
FaqI	GGGAC	2 cut(s)	91, 305
FauI	CCCGC	1 cut(s)	116
FbaI	TGATCA	1 cut(s)	330
FblI	GTMKAC	1 cut(s)	1407
Fnu4HI	GCNGC	6 cut(s)	726, 852, 918, 1281, 1847, 1880
FokI	GGATG	5 cut(s)	294, 772, 941, 1143, 1877
Fsp4HI	GCNGC	6 cut(s)	726, 852, 918, 1281, 1847, 1880
FspBI	CTAG	3 cut(s)	1155, 1932, 2013
FspI	TGCGCA	1 cut(s)	697
GlaI	GCGC	1 cut(s)	697
GluI	GCNGC	6 cut(s)	726, 852, 918, 1281, 1847, 1880
GsuI	CTGGAG	2 cut(s)	559, 1601
HaeIII	GGCC	4 cut(s)	99, 1256, 1373, 1629
HgaI	GACGC	1 cut(s)	1094
HhaI	GCGC	1 cut(s)	698
Hin6I	GCGC	1 cut(s)	696
HinP1I	GCGC	1 cut(s)	696
HincII	GTYRAC	3 cut(s)	1180, 1408, 2000
HindII	GTYRAC	3 cut(s)	1180, 1408, 2000
HinfI	GANTC	8 cut(s)	75, 128, 179, 211, 218, 1271, 1300, 1331
HphI	GGTGA	4 cut(s)	1067, 1093, 1828, 1958
Hpy166II	GTNNAC	6 cut(s)	377, 1101, 1180, 1408, 1856, 2000
Hpy8I	GTNNAC	6 cut(s)	377, 1101, 1180, 1408, 1856, 2000
Hpy99I	CGWCG	2 cut(s)	389, 1412
HpyAV	CCTTC	7 cut(s)	65, 89, 243, 248, 1029, 1780, 1807
HpyCH4III	ACNGT	8 cut(s)	204, 457, 657, 1009, 1704, 1894, 1925, 2010
HpyCH4IV	ACGT	3 cut(s)	231, 709, 1624
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1049, 1289
HpySE526I	ACGT	3 cut(s)	231, 709, 1624
HspAI	GCGC	1 cut(s)	696
Ksp22I	TGATCA	1 cut(s)	330
Kzo9I	GATC	7 cut(s)	297, 330, 354, 589, 641, 1012, 1194
LguI	GCTCTTC	1 cut(s)	1221
LmnI	GCTCC	4 cut(s)	671, 848, 1582, 1708
Lsp1109I	GCAGC	6 cut(s)	712, 838, 929, 1267, 1858, 1891
LweI	GCATC	2 cut(s)	562, 1121
MaeI	CTAG	3 cut(s)	1155, 1932, 2013
MaeII	ACGT	3 cut(s)	231, 709, 1624
MaeIII	GTNAC	4 cut(s)	487, 1003, 1073, 1800
MalI	GATC	7 cut(s)	299, 332, 356, 591, 643, 1014, 1196
MbiI	CCGCTC	1 cut(s)	1944
MboI	GATC	7 cut(s)	297, 330, 354, 589, 641, 1012, 1194
MboII	GAAGA	9 cut(s)	152, 577, 774, 1238, 1681, 1820, 1912, 1963, 2011
MfeI	CAATTG	1 cut(s)	1754
MflI	RGATCY	2 cut(s)	641, 1194
MhlI	GDGCHC	1 cut(s)	379
MlyI	GAGTC	4 cut(s)	69, 137, 227, 1309
MmeI	TCCRAC	2 cut(s)	367, 1686
Mph1103I	ATGCAT	1 cut(s)	555
MroXI	GAANNNNTTC	3 cut(s)	527, 980, 1557
MseI	TTAA	8 cut(s)	60, 348, 420, 570, 684, 716, 987, 1632
MslI	CAYNNNNRTG	1 cut(s)	1210
MspCI	CTTAAG	2 cut(s)	347, 715
MspR9I	CCNGG	2 cut(s)	184, 1580
MunI	CAATTG	1 cut(s)	1754
MvaI	CCWGG	2 cut(s)	184, 1580
MwoI	GCNNNNNNNGC	2 cut(s)	1049, 1289
NcoI	CCATGG	1 cut(s)	1859
NdeII	GATC	7 cut(s)	297, 330, 354, 589, 641, 1012, 1194
NlaIV	GGNNCC	2 cut(s)	123, 667
NmuCI	GTSAC	2 cut(s)	1003, 1073
NsbI	TGCGCA	1 cut(s)	697
NsiI	ATGCAT	1 cut(s)	555
NspI	RCATGY	3 cut(s)	160, 553, 1215
NspV	TTCGAA	1 cut(s)	247
PaeI	GCATGC	1 cut(s)	553
PciI	ACATGT	1 cut(s)	156
PciSI	GCTCTTC	1 cut(s)	1221
PdmI	GAANNNNTTC	3 cut(s)	527, 980, 1557
PfeI	GAWTC	4 cut(s)	179, 211, 1271, 1331
PflMI	CCANNNNNTGG	1 cut(s)	1343
PkrI	GCNGC	6 cut(s)	727, 853, 919, 1282, 1848, 1881
PleI	GAGTC	4 cut(s)	69, 136, 226, 1308
PpsI	GAGTC	4 cut(s)	69, 136, 226, 1308
Ppu21I	YACGTR	1 cut(s)	710
PscI	ACATGT	1 cut(s)	156
Psp6I	CCWGG	2 cut(s)	182, 1578
PspGI	CCWGG	2 cut(s)	182, 1578
PspN4I	GGNNCC	2 cut(s)	123, 667
PspPI	GGNCC	4 cut(s)	98, 133, 204, 1372
PstI	CTGCAG	1 cut(s)	1031
PsuI	RGATCY	2 cut(s)	641, 1194
RsaI	GTAC	4 cut(s)	1359, 1464, 1857, 1974
RsaNI	GTAC	4 cut(s)	1358, 1463, 1856, 1973
RseI	CAYNNNNRTG	1 cut(s)	1210
SalI	GTCGAC	1 cut(s)	1406
SapI	GCTCTTC	1 cut(s)	1221
SaqAI	TTAA	8 cut(s)	60, 348, 420, 570, 684, 716, 987, 1632
SatI	GCNGC	6 cut(s)	726, 852, 918, 1281, 1847, 1880
Sau3AI	GATC	7 cut(s)	297, 330, 354, 589, 641, 1012, 1194
Sau96I	GGNCC	4 cut(s)	98, 133, 204, 1372
SchI	GAGTC	4 cut(s)	69, 137, 227, 1309
ScrFI	CCNGG	2 cut(s)	184, 1580
SduI	GDGCHC	1 cut(s)	379
SfaNI	GCATC	2 cut(s)	562, 1121
SfcI	CTRYAG	2 cut(s)	336, 1027
SfuI	TTCGAA	1 cut(s)	247
SinI	GGWCC	2 cut(s)	133, 204
SmiMI	CAYNNNNRTG	1 cut(s)	1210
SmlI	CTYRAG	7 cut(s)	235, 347, 715, 1080, 1167, 1198, 1939
SmoI	CTYRAG	7 cut(s)	235, 347, 715, 1080, 1167, 1198, 1939
SphI	GCATGC	1 cut(s)	553
SsiI	CCGC	5 cut(s)	109, 279, 632, 669, 1944
SspI	AATATT	1 cut(s)	1746
SspMI	CTAG	3 cut(s)	1155, 1932, 2013
StyD4I	CCNGG	2 cut(s)	182, 1578
StyI	CCWWGG	2 cut(s)	1375, 1859
TaaI	ACNGT	8 cut(s)	204, 457, 657, 1009, 1704, 1894, 1925, 2010
TaiI	ACGT	3 cut(s)	234, 712, 1627
TaqI	TCGA	9 cut(s)	161, 247, 556, 588, 1015, 1308, 1407, 1686, 2005
TaqII	GACCGA	1 cut(s)	121
TatI	WGTACW	1 cut(s)	1462
TfiI	GAWTC	4 cut(s)	179, 211, 1271, 1331
Tru1I	TTAA	8 cut(s)	60, 348, 420, 570, 684, 716, 987, 1632
Tru9I	TTAA	8 cut(s)	60, 348, 420, 570, 684, 716, 987, 1632
TscAI	CASTG	2 cut(s)	1071, 1856
TseFI	GTSAC	2 cut(s)	1003, 1073
TseI	GCWGC	6 cut(s)	725, 851, 917, 1280, 1846, 1879
Tsp45I	GTSAC	2 cut(s)	1003, 1073
TspDTI	ATGAA	9 cut(s)	153, 520, 774, 842, 902, 945, 989, 1194, 1461
TspGWI	ACGGA	1 cut(s)	1613
TspRI	CASTG	2 cut(s)	1071, 1856
Van91I	CCANNNNNTGG	1 cut(s)	1343
Vha464I	CTTAAG	2 cut(s)	347, 715
VneI	GTGCAC	1 cut(s)	375
VpaK11BI	GGWCC	2 cut(s)	133, 204
XagI	CCTNNNNNAGG	1 cut(s)	1583
XapI	RAATTY	7 cut(s)	309, 702, 744, 881, 958, 1389, 1553
XceI	RCATGY	3 cut(s)	160, 553, 1215
XcmI	CCANNNNNNNNNTGG	1 cut(s)	796
XmiI	GTMKAC	1 cut(s)	1407
XmnI	GAANNNNTTC	3 cut(s)	527, 980, 1557
XspI	CTAG	3 cut(s)	1155, 1932, 2013
Zsp2I	ATGCAT	1 cut(s)	555

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.