Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0002344

Physical Location & Seq

Genomic Coordinates Forward (+)

9412204 .. 9417602

Gene Structure 5399 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000016724

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2031 bp

ATGGCGATAACTTCCCTCAGAGGCAACAATCACTTGTTATCTCGCCTCAAACTCCTTCTTAACCAGCAACAGAGACTCGCCCACACGTTCTCCGAAGGTCCTCAGTCTCGCCCTAAAAAAATGGTTCCTGAAGAGGGGTTGATTGACATGTCGAAATGGAGAAAGGTGGATTCGAGGTTGTTGGGGATAACACGGTCCATGATTCCCGAGTCGTCTTGGAACGTCTTGAGAATACTTCGAAGGGAAGGGTTTGAAGCCTACTTAGTGGGCGGATGTGTGAGGGACTTGATCCTGAAAAGAATTCCTAAAGACTTTGATGTGATCACTACAGCTAATCTTAAACAGATCAAGAGGCAGTTCCATCGTGCACAAATTGTCGGACAACGATTTCCTATATGTATGGTGCATATTAAAGGTTCTGTCATAGAGGTGTCCAGTTTTGAAACGGTGGCAAAAGCAAAACACTCCGATAAAGAAGTTACTTTCTCTCAAATGCCAAAGGGCTGTGATAAGAAAGATTTCATCCGCTGGAGAAACAGCATGCATCGAGACTTCACAATTAACAGTTTGTTCTTTGATCCTTTATCAAATAAAATCTTTGATTATGCAAATGGAATGGCGGATTTGAGATCCTTAGAGCTACGGTCGTTAGGCTCCGCCAAGTTGTCATTTAAAGAGGATTGCGCAAGAATTTTACGTGGCTTAAGAATTGCTGCTCGTCTGAGTTTGTCAATTTCAAAAGAAACCGAGACAGCTATACATAAGTTTTCTTCATCCATTTCGACATTGGCAACGAGTAGAATTATGATGGAAATGAACTATATGCTTTCTTATGGAGCTGCTGAGCCATCTCTCTGTCTGCTTTCGAAATTCAATCTACTCAGAGTTCTACTTCCAATTCATGCAGCATACTTGGATGAACAGCGTATTAGGAACACATACTGCAATGACTACTTGAATTCCACGATGTTGATGAAACTATTCTTTAATTTGGATAAAGTTGTCACGGTTGATCGACCTTCTGACTGCAGTTTATGGGTAGCTCTGTTGGCTTTTCACATGGCACTGGTCAGTCACCCTCAAGACGCTCTTGTGGTGTTTACCATTGGTTCTATCCTGTATCATGGGGGATGCAAAAAGGGTCTTACATTTGCTAGAGACAATGCTCAAGTGATAGTTGACTATCGACCTGAGATCTCAAGTTCATCTGCATGTAAATCAGAGGAAGAGCTTGAAAAAGAAGTTTCCCTATTGGCCTCTCTTGTTTTAGATTCTATTGCTGCTCTAACTGCAATTGAGAGTCTTGTTGAAACGATGTCTAAGTATCCTGAATCTCCATGCTCTGGATTGGTATTTGTACCAAAGAAAACGGCCCAAGGTGTTGCTGAAATTTTTAGAGTTCTGGCGGACGACATCAAATCTTACAATAGAGAAAGAAAAAGTTATGAAATTGATTACCCTGTACTTCGGAAAGGTTTTCTGCATGAGACAAGATTTGTGCTTGGCAAAATTATTTTAGAAACCATGAGCAGTAGTATTTTGAAAGGGGAGGAATTTGTTCAGGAGGACTACCGACACCTGGAGCAGGAGAGCATTAAGGAAAATTGCAATAAGGGTAAAAAACGTGGCCTTAAACCTGATACTCCTGAACTAAAACAAGAGTTGGCGAAGAAACATAAGTTGGTCGAAAAGAAATGCAGACCGTTGGAGCAAGAGATGGATATTGATAACCAAGATGCTGTAACATTATCGCAATTGGTTTCAGTGCTGGGACATAATGTAGATAAGGAAACATGCCAGTTACCTGAGGAGAAGGTGATAAAGAAAAAACATAAGGCAACGAAGCAGCAGTGTGTATCACGGGATGAGGCAACGAAGCAGCAACTAAAGACAGTTGAGAAGAATAATGGCAAGGAGAATGACAGTCTATCTAGTCTCTTGAGCGGTGAGAAGATACAGAAACGCAAAGTATTAGACAAGGGGGAGAAAAGCAGTCAACTTCGACTGTCTAGTCTCTTCAAGTACACATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004652 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006139 GO:0006276 GO:0006378 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0016740 GO:0016772 GO:0016779 GO:0031123 GO:0031124 GO:0034641 GO:0043170 GO:0043412 GO:0043631 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0070566 GO:0071704 GO:0090304 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PolyA_pol PolyA_pol_RNAbd

Protein Analysis

677

Amino Acids

76.87

Weight (kDa)

9.28

Isoelectric Point (pI)

47.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PolyA_pol	PF01743	86 - 213	2.4e-24	Poly A polymerase head domain
PolyA_pol_RNAbd	PF12627	243 - 304	1.3e-13	Probable RNA and SrmB- binding site of polymerase A

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002344)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G17580
fragaria_vesca	FvH4_1g10510 FvH4_1g10510 FvH4_1g10510 FvH4_1g10510 FvH4_1g29700
malus_domestica	MD02G1119000.v1.1 MD15G1233000.v1.1
prunus_persica	Prupe.7G180900_v2.0.a1 Prupe.7G180900_v2.0.a1 Prupe.7G180900_v2.0.a1 Prupe.7G180900_v2.0.a1 Prupe.7G180900_v2.0.a1 Prupe.7G180900_v2.0.a1 Prupe.7G180900_v2.0.a1 Prupe.7G180900_v2.0.a1 Prupe.7G180900_v2.0.a1 Prupe.7G180900_v2.0.a1
pyrus_communis	pycom02g09260 pycom02g09270 pycom15g20750
rosa_chinensis	RchiOBHm_Chr2g0097411 RchiOBHm_Chr2g0097511 RchiOBHm_Chr3g0465401
rosa_laevigata	RLG00000016724
rosa_multiflora	Rmu_sc0001060.1_g000002 Rmu_sc0004220.1_g000008 Rmu_sc0011781.1_g000006
rosa_roxburghii	Rroxscaffold_2G00144710
rosa_rugosa	Rorug02G0066800 Rorug02G0066800 Rorug02G0066800
rosa_samantha	Rh2AG113200 Rh2BG116200 Rh2BG116300 Rh2CG118200 Rh2CG118300 Rh2DG117300 Rh3BG141600 Rh3CG142700 Rh3DG142700
rosa_wichuraiana	Rw2G008870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	2010
Acc16I	TGCGCA	1 cut(s)	685
AccB7I	CCANNNNNTGG	1 cut(s)	1343
AccBSI	CCGCTC	1 cut(s)	1944
AciI	CCGC	6 cut(s)	270, 526, 620, 657, 1406, 1944
AclWI	GGATC	3 cut(s)	283, 572, 624
AcsI	RAATTY	6 cut(s)	300, 690, 869, 958, 1389, 1553
AcuI	CTGAAG	1 cut(s)	150
AfaI	GTAC	3 cut(s)	1359, 1464, 2024
AfiI	CCNNNNNNNGG	4 cut(s)	134, 1343, 1579, 1585
AflII	CTTAAG	1 cut(s)	703
AflIII	ACRYGT	2 cut(s)	84, 147
AgsI	TTSAA	9 cut(s)	254, 443, 738, 874, 958, 1235, 1310, 1543, 2020
AjnI	CCWGG	1 cut(s)	1578
AjuI	GAANNNNNNNTTGG	2 cut(s)	1664, 1696
AluBI	AGCT	6 cut(s)	332, 640, 755, 839, 1043, 1231
AluI	AGCT	6 cut(s)	332, 640, 755, 839, 1043, 1231
Alw21I	GWGCWC	1 cut(s)	370
Alw26I	GTCTC	8 cut(s)	67, 111, 543, 743, 1152, 1481, 1940, 2018
Alw44I	GTGCAC	1 cut(s)	366
AlwI	GGATC	3 cut(s)	283, 572, 624
Ama87I	CYCGRG	1 cut(s)	206
AoxI	GGCC	3 cut(s)	1254, 1371, 1627
ApaLI	GTGCAC	1 cut(s)	366
ApeKI	GCWGC	6 cut(s)	713, 839, 905, 1280, 1846, 1879
ApoI	RAATTY	6 cut(s)	300, 690, 869, 958, 1389, 1553
Asp700I	GAANNNNTTC	3 cut(s)	518, 980, 1557
AspLEI	GCGC	1 cut(s)	686
AspS9I	GGNCC	3 cut(s)	98, 195, 1372
AsuHPI	GGTGA	3 cut(s)	1067, 1828, 1958
AsuII	TTCGAA	2 cut(s)	238, 866
AvaI	CYCGRG	1 cut(s)	206
AvaII	GGWCC	2 cut(s)	98, 195
AxyI	CCTNAGG	1 cut(s)	1806
BaeGI	GKGCMC	1 cut(s)	370
Bbv12I	GWGCWC	1 cut(s)	370
BbvI	GCAGC	6 cut(s)	700, 826, 917, 1267, 1858, 1891
BccI	CCATC	4 cut(s)	369, 802, 856, 1711
BceAI	ACGGC	1 cut(s)	1386
BcgI	CGANNNNNNTGC	2 cut(s)	344, 378
BciT130I	CCWGG	1 cut(s)	1580
BciVI	GTATCC	1 cut(s)	1335
BclI	TGATCA	1 cut(s)	321
BcoDI	GTCTC	8 cut(s)	67, 111, 543, 743, 1152, 1481, 1940, 2018
BfaI	CTAG	3 cut(s)	1155, 1932, 2010
BfmI	CTRYAG	2 cut(s)	327, 1027
BfrI	CTTAAG	1 cut(s)	703
BfuI	GTATCC	1 cut(s)	1335
BglII	AGATCT	1 cut(s)	1194
BisI	GCNGC	6 cut(s)	714, 840, 906, 1281, 1847, 1880
BlpI	GCTNAGC	1 cut(s)	843
BlsI	GCNGC	6 cut(s)	715, 841, 907, 1282, 1848, 1881
Bme1390I	CCNGG	1 cut(s)	1580
Bme18I	GGWCC	2 cut(s)	98, 195
BmeT110I	CYCGRG	1 cut(s)	206
BmgT120I	GGNCC	3 cut(s)	98, 195, 1372
BmiI	GGNNCC	2 cut(s)	126, 655
BmrFI	CCNGG	1 cut(s)	1580
BmsI	GCATC	3 cut(s)	553, 1121, 1726
BpmI	CTGGAG	2 cut(s)	550, 1601
Bpu1102I	GCTNAGC	1 cut(s)	843
Bpu14I	TTCGAA	2 cut(s)	238, 866
BpuEI	CTTGAG	5 cut(s)	247, 1065, 1152, 1183, 1960
BsaAI	YACGTR	1 cut(s)	698
BsaJI	CCNNGG	1 cut(s)	1375
BsaXI	ACNNNNNCTCC	2 cut(s)	74, 104
Bsc4I	CCNNNNNNNGG	4 cut(s)	134, 1343, 1579, 1585
Bse1I	ACTGG	3 cut(s)	435, 1071, 1798
Bse21I	CCTNAGG	1 cut(s)	1806
Bse3DI	GCAATG	1 cut(s)	952
BseBI	CCWGG	1 cut(s)	1580
BseDI	CCNNGG	1 cut(s)	1375
BseGI	GGATG	6 cut(s)	278, 522, 773, 922, 1136, 1870
BseLI	CCNNNNNNNGG	4 cut(s)	134, 1343, 1579, 1585
BseMI	GCAATG	1 cut(s)	952
BseMII	CTCAG	7 cut(s)	31, 116, 713, 834, 895, 1182, 1797
BseNI	ACTGG	3 cut(s)	435, 1071, 1798
BseRI	GAGGAG	1 cut(s)	1823
BseSI	GKGCMC	1 cut(s)	370
BseXI	GCAGC	6 cut(s)	700, 826, 917, 1267, 1858, 1891
BseYI	CCCAGC	1 cut(s)	1768
Bsh1285I	CGRYCG	1 cut(s)	647
BshFI	GGCC	3 cut(s)	1256, 1373, 1629
BsiEI	CGRYCG	1 cut(s)	647
BsiHKAI	GWGCWC	1 cut(s)	370
BsiHKCI	CYCGRG	1 cut(s)	206
BslFI	GGGAC	2 cut(s)	296, 1785
BslI	CCNNNNNNNGG	4 cut(s)	134, 1343, 1579, 1585
BsmAI	GTCTC	8 cut(s)	67, 111, 543, 743, 1152, 1481, 1940, 2018
BsmFI	GGGAC	2 cut(s)	296, 1785
BsnI	GGCC	3 cut(s)	1256, 1373, 1629
BsoBI	CYCGRG	1 cut(s)	206
Bsp119I	TTCGAA	2 cut(s)	238, 866
Bsp1286I	GDGCHC	1 cut(s)	370
Bsp143I	GATC	7 cut(s)	288, 321, 345, 577, 629, 1012, 1194
Bsp1720I	GCTNAGC	1 cut(s)	843
BspACI	CCGC	6 cut(s)	270, 526, 620, 657, 1406, 1944
BspANI	GGCC	3 cut(s)	1256, 1373, 1629
BspCNI	CTCAG	7 cut(s)	30, 115, 714, 835, 894, 1183, 1798
BspLI	GGNNCC	2 cut(s)	126, 655
BspMAI	CTGCAG	1 cut(s)	1031
BspPI	GGATC	3 cut(s)	283, 572, 624
BspQI	GCTCTTC	1 cut(s)	1221
BspT104I	TTCGAA	2 cut(s)	238, 866
BspTI	CTTAAG	1 cut(s)	703
BsrBI	CCGCTC	1 cut(s)	1944
BsrDI	GCAATG	1 cut(s)	952
BsrI	ACTGG	3 cut(s)	435, 1071, 1798
BssECI	CCNNGG	1 cut(s)	1375
BssMI	GATC	7 cut(s)	288, 321, 345, 577, 629, 1012, 1194
BssT1I	CCWWGG	1 cut(s)	1375
Bst2UI	CCWGG	1 cut(s)	1580
Bst4CI	ACNGT	9 cut(s)	195, 448, 566, 645, 1009, 1704, 1894, 1925, 2007
Bst6I	CTCTTC	3 cut(s)	126, 1221, 2021
BstAFI	CTTAAG	1 cut(s)	703
BstBAI	YACGTR	1 cut(s)	698
BstBI	TTCGAA	2 cut(s)	238, 866
BstC8I	GCNNGC	1 cut(s)	542
BstENI	CCTNNNNNAGG	1 cut(s)	1583
BstF5I	GGATG	6 cut(s)	278, 522, 773, 922, 1136, 1870
BstHHI	GCGC	1 cut(s)	686
BstKTI	GATC	7 cut(s)	291, 324, 348, 580, 632, 1015, 1197
BstMAI	GTCTC	8 cut(s)	67, 111, 543, 743, 1152, 1481, 1940, 2018
BstMBI	GATC	7 cut(s)	288, 321, 345, 577, 629, 1012, 1194
BstMCI	CGRYCG	1 cut(s)	647
BstMWI	GCNNNNNNNGC	2 cut(s)	1049, 1289
BstNI	CCWGG	1 cut(s)	1580
BstNSI	RCATGY	4 cut(s)	151, 544, 1215, 1797
BstSCI	CCNGG	1 cut(s)	1578
BstSFI	CTRYAG	2 cut(s)	327, 1027
BstSLI	GKGCMC	1 cut(s)	370
BstV1I	GCAGC	6 cut(s)	700, 826, 917, 1267, 1858, 1891
BstX2I	RGATCY	2 cut(s)	629, 1194
BstYI	RGATCY	2 cut(s)	629, 1194
Bsu36I	CCTNAGG	1 cut(s)	1806
BsuI	GTATCC	1 cut(s)	1335
BsuRI	GGCC	3 cut(s)	1256, 1373, 1629
BtsCI	GGATG	6 cut(s)	278, 522, 773, 922, 1136, 1870
BtsI	GCAGTG	1 cut(s)	1856
BtsIMutI	CAGTG	3 cut(s)	1064, 1770, 1856
Cac8I	GCNNGC	1 cut(s)	542
CfoI	GCGC	1 cut(s)	686
Cfr13I	GGNCC	3 cut(s)	98, 195, 1372
CseI	GACGC	1 cut(s)	1094
Csp6I	GTAC	3 cut(s)	1358, 1463, 2023
CviQI	GTAC	3 cut(s)	1358, 1463, 2023
DpnI	GATC	7 cut(s)	290, 323, 347, 579, 631, 1014, 1196
DpnII	GATC	7 cut(s)	288, 321, 345, 577, 629, 1012, 1194
DraI	TTTAAA	1 cut(s)	673
DrdI	GACNNNNNNGTC	1 cut(s)	2010
DseDI	GACNNNNNNGTC	1 cut(s)	2010
Eam1104I	CTCTTC	3 cut(s)	126, 1221, 2021
EarI	CTCTTC	3 cut(s)	126, 1221, 2021
EciI	GGCGGA	4 cut(s)	285, 635, 646, 1421
Eco130I	CCWWGG	1 cut(s)	1375
Eco47I	GGWCC	2 cut(s)	98, 195
Eco57I	CTGAAG	1 cut(s)	150
Eco81I	CCTNAGG	1 cut(s)	1806
Eco88I	CYCGRG	1 cut(s)	206
EcoNI	CCTNNNNNAGG	1 cut(s)	1583
EcoO109I	RGGNCCY	1 cut(s)	98
EcoRI	GAATTC	2 cut(s)	300, 958
EcoRII	CCWGG	1 cut(s)	1578
EcoT14I	CCWWGG	1 cut(s)	1375
EcoT22I	ATGCAT	1 cut(s)	546
ErhI	CCWWGG	1 cut(s)	1375
FalI	AAGNNNNNCTT	2 cut(s)	1074, 1106
FaqI	GGGAC	2 cut(s)	296, 1785
FbaI	TGATCA	1 cut(s)	321
Fnu4HI	GCNGC	6 cut(s)	714, 840, 906, 1281, 1847, 1880
FokI	GGATG	6 cut(s)	285, 509, 760, 929, 1143, 1877
Fsp4HI	GCNGC	6 cut(s)	714, 840, 906, 1281, 1847, 1880
FspBI	CTAG	3 cut(s)	1155, 1932, 2010
FspI	TGCGCA	1 cut(s)	685
GlaI	GCGC	1 cut(s)	685
GluI	GCNGC	6 cut(s)	714, 840, 906, 1281, 1847, 1880
GsaI	CCCAGC	1 cut(s)	1772
GsuI	CTGGAG	2 cut(s)	550, 1601
HaeIII	GGCC	3 cut(s)	1256, 1373, 1629
HgaI	GACGC	1 cut(s)	1094
HhaI	GCGC	1 cut(s)	686
Hin6I	GCGC	1 cut(s)	684
HinP1I	GCGC	1 cut(s)	684
HincII	GTYRAC	2 cut(s)	1180, 1997
HindII	GTYRAC	2 cut(s)	1180, 1997
HinfI	GANTC	7 cut(s)	75, 170, 202, 209, 1271, 1300, 1331
HphI	GGTGA	3 cut(s)	1067, 1828, 1958
Hpy166II	GTNNAC	5 cut(s)	368, 1101, 1180, 1997, 2025
Hpy188I	TCNGA	9 cut(s)	20, 94, 380, 469, 723, 884, 1024, 1222, 1470
Hpy8I	GTNNAC	5 cut(s)	368, 1101, 1180, 1997, 2025
HpyAV	CCTTC	6 cut(s)	65, 89, 234, 239, 1029, 1807
HpyCH4III	ACNGT	9 cut(s)	195, 448, 566, 645, 1009, 1704, 1894, 1925, 2007
HpyCH4IV	ACGT	4 cut(s)	86, 222, 697, 1624
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1049, 1289
HpySE526I	ACGT	4 cut(s)	86, 222, 697, 1624
HspAI	GCGC	1 cut(s)	684
Ksp22I	TGATCA	1 cut(s)	321
Kzo9I	GATC	7 cut(s)	288, 321, 345, 577, 629, 1012, 1194
LguI	GCTCTTC	1 cut(s)	1221
LmnI	GCTCC	4 cut(s)	659, 836, 1582, 1708
Lsp1109I	GCAGC	6 cut(s)	700, 826, 917, 1267, 1858, 1891
LweI	GCATC	3 cut(s)	553, 1121, 1726
MaeI	CTAG	3 cut(s)	1155, 1932, 2010
MaeII	ACGT	4 cut(s)	86, 222, 697, 1624
MaeIII	GTNAC	5 cut(s)	478, 1003, 1073, 1741, 1800
MalI	GATC	7 cut(s)	290, 323, 347, 579, 631, 1014, 1196
MbiI	CCGCTC	1 cut(s)	1944
MboI	GATC	7 cut(s)	288, 321, 345, 577, 629, 1012, 1194
MboII	GAAGA	7 cut(s)	143, 762, 1238, 1681, 1912, 1963, 2008
MfeI	CAATTG	2 cut(s)	1293, 1754
MflI	RGATCY	2 cut(s)	629, 1194
MhlI	GDGCHC	1 cut(s)	370
MlyI	GAGTC	3 cut(s)	69, 218, 1309
MmeI	TCCRAC	2 cut(s)	358, 1686
Mph1103I	ATGCAT	1 cut(s)	546
MroXI	GAANNNNTTC	3 cut(s)	518, 980, 1557
MseI	TTAA	9 cut(s)	60, 339, 411, 561, 672, 704, 987, 1596, 1632
MslI	CAYNNNNRTG	2 cut(s)	428, 1210
MspA1I	CMGCKG	1 cut(s)	528
MspCI	CTTAAG	1 cut(s)	703
MspR9I	CCNGG	1 cut(s)	1580
MunI	CAATTG	2 cut(s)	1293, 1754
MvaI	CCWGG	1 cut(s)	1580
MwoI	GCNNNNNNNGC	2 cut(s)	1049, 1289
NdeII	GATC	7 cut(s)	288, 321, 345, 577, 629, 1012, 1194
NlaIV	GGNNCC	2 cut(s)	126, 655
NmuCI	GTSAC	2 cut(s)	1003, 1073
NsbI	TGCGCA	1 cut(s)	685
NsiI	ATGCAT	1 cut(s)	546
NspI	RCATGY	4 cut(s)	151, 544, 1215, 1797
NspV	TTCGAA	2 cut(s)	238, 866
PaeI	GCATGC	1 cut(s)	544
PciI	ACATGT	1 cut(s)	147
PciSI	GCTCTTC	1 cut(s)	1221
PdmI	GAANNNNTTC	3 cut(s)	518, 980, 1557
PfeI	GAWTC	4 cut(s)	170, 202, 1271, 1331
PflMI	CCANNNNNTGG	1 cut(s)	1343
PkrI	GCNGC	6 cut(s)	715, 841, 907, 1282, 1848, 1881
PleI	GAGTC	3 cut(s)	69, 217, 1308
PpsI	GAGTC	3 cut(s)	69, 217, 1308
Ppu21I	YACGTR	1 cut(s)	698
PpuMI	RGGWCCY	1 cut(s)	98
PscI	ACATGT	1 cut(s)	147
Psp5II	RGGWCCY	1 cut(s)	98
Psp6I	CCWGG	1 cut(s)	1578
PspFI	CCCAGC	1 cut(s)	1768
PspGI	CCWGG	1 cut(s)	1578
PspN4I	GGNNCC	2 cut(s)	126, 655
PspPI	GGNCC	3 cut(s)	98, 195, 1372
PspPPI	RGGWCCY	1 cut(s)	98
PstI	CTGCAG	1 cut(s)	1031
PsuI	RGATCY	2 cut(s)	629, 1194
RsaI	GTAC	3 cut(s)	1359, 1464, 2024
RsaNI	GTAC	3 cut(s)	1358, 1463, 2023
RseI	CAYNNNNRTG	2 cut(s)	428, 1210
SapI	GCTCTTC	1 cut(s)	1221
SaqAI	TTAA	9 cut(s)	60, 339, 411, 561, 672, 704, 987, 1596, 1632
SatI	GCNGC	6 cut(s)	714, 840, 906, 1281, 1847, 1880
Sau3AI	GATC	7 cut(s)	288, 321, 345, 577, 629, 1012, 1194
Sau96I	GGNCC	3 cut(s)	98, 195, 1372
SchI	GAGTC	3 cut(s)	69, 218, 1309
ScrFI	CCNGG	1 cut(s)	1580
SduI	GDGCHC	1 cut(s)	370
SfaNI	GCATC	3 cut(s)	553, 1121, 1726
SfcI	CTRYAG	2 cut(s)	327, 1027
SfuI	TTCGAA	2 cut(s)	238, 866
SinI	GGWCC	2 cut(s)	98, 195
SmiMI	CAYNNNNRTG	2 cut(s)	428, 1210
SmlI	CTYRAG	6 cut(s)	226, 703, 1080, 1167, 1198, 1939
SmoI	CTYRAG	6 cut(s)	226, 703, 1080, 1167, 1198, 1939
SphI	GCATGC	1 cut(s)	544
SsiI	CCGC	6 cut(s)	270, 526, 620, 657, 1406, 1944
SspMI	CTAG	3 cut(s)	1155, 1932, 2010
StyD4I	CCNGG	1 cut(s)	1578
StyI	CCWWGG	1 cut(s)	1375
TaaI	ACNGT	9 cut(s)	195, 448, 566, 645, 1009, 1704, 1894, 1925, 2007
TaiI	ACGT	4 cut(s)	89, 225, 700, 1627
TatI	WGTACW	2 cut(s)	1462, 2022
TfiI	GAWTC	4 cut(s)	170, 202, 1271, 1331
Tru1I	TTAA	9 cut(s)	60, 339, 411, 561, 672, 704, 987, 1596, 1632
Tru9I	TTAA	9 cut(s)	60, 339, 411, 561, 672, 704, 987, 1596, 1632
TscAI	CASTG	3 cut(s)	1071, 1770, 1856
TseFI	GTSAC	2 cut(s)	1003, 1073
TseI	GCWGC	6 cut(s)	713, 839, 905, 1280, 1846, 1879
Tsp45I	GTSAC	2 cut(s)	1003, 1073
TspDTI	ATGAA	8 cut(s)	511, 762, 830, 890, 933, 989, 1194, 1461
TspRI	CASTG	3 cut(s)	1071, 1770, 1856
Van91I	CCANNNNNTGG	1 cut(s)	1343
Vha464I	CTTAAG	1 cut(s)	703
VneI	GTGCAC	1 cut(s)	366
VpaK11BI	GGWCC	2 cut(s)	98, 195
XagI	CCTNNNNNAGG	1 cut(s)	1583
XapI	RAATTY	6 cut(s)	300, 690, 869, 958, 1389, 1553
XceI	RCATGY	4 cut(s)	151, 544, 1215, 1797
XcmI	CCANNNNNNNNNTGG	1 cut(s)	784
XmnI	GAANNNNTTC	3 cut(s)	518, 980, 1557
XspI	CTAG	3 cut(s)	1155, 1932, 2010
Zsp2I	ATGCAT	1 cut(s)	546

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.