Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0002344

Physical Location & Seq

Genomic Coordinates Forward (+)

10053017 .. 10058671

Gene Structure 5655 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ47228

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1998 bp

ATGGCGGTAACATCCCTCAGAGGCAACAATCACTTGTTATCTCGCCTCAAACTCCTTCTTAACCAGCAACAGAGACTCGCCCACACGCTCTCCGAAGGCCCTCAGTCCCGCCCTAAAATGGTTCCTGAGTCGGTCCATGAAGAGGGGTTGATTGACATGTCGAAATGGAGAAAGGTGGATTCCAGGGTGTTTGGGATAACACGGTCCATGATTCCCGAGCCATCTTGGAACGTCTTGAGAATACTTCGAAGGGAAGGGTTTGAAGCCTACTTAGTGGGCGGATGTGTGAGGGACTTAATCCTGAAAAGAATTCCTAAAGACTTTGACGTGATCACTACAGCTAATCTTAAGCAGATCAAGAGGCAGTTCCATCGTGCACAAATTGTCGGACAACGATTTCCTATATGTATGGTGCATATTAAAGGTTCTGTCATAGAGGTATCCAGTTTTGAAACGGTGGCAAAAGCAAAACACTCTGATAAAGAAGTTACTTTCTCTCAAATGCCAAAGGGCTGTGATAAGAAAGATTTCATCCGCTGGAGAAACAGCATGCATCGAGACTTCACAATTAACAGTTTGTTCTTTGATCCTTTATCAAATAAAATATTTGATTATGCAAATGGAATGGCGGATTTGAGATCCTCAAAGCTACGGTCGTTAGGCTCCGCCAAGTTGTCATTTAAAGAGGATTGCGCAAGAATTTTACGTGGCTTAAGAATTGCTGCTCGTCTGAGTTTGAAAATTTCAAAAGAAACCGAGACAGCTATACATAAGTTTTCTTCATCCATTTCGACATTGGCAACGAGTAGAATTATGATGGAAATGAACTATATGCTTTCTTATGGAGCTGCTGAGCCATCTCTCTGTCTGCTTTGGGAATTCAATCTACTCAGAGTTCTACTTCCAATTCATGCAGCATACTTGGATGAACAGAGGATTAGGAAGTTTCCTCAGAATTCCACGATGTTGATGAAACTATTCTTTAATTTGGATAAAGTTGTCACGGTTGATCGACCTTCTGACTGCAGTTTATGGGTAGCTCTGTTGGCTTTTCACATGGCACTGGTCAGTCACCCTCAAGACGCTCTTGTGGTGTTCACCTTTGCTTCTGTCCTGTATCATGGGGGATGCAAAAAGGGTCTTACATTTGCTAGAGACAATGCTCAAGTGATAGTTGACTATCTACCTGAGATATCAAGTTCATCTGCATGTAAATCAGAGGAAGAGCTTGAAAAAGAAGTTTCCTTATTGGCCTCTCTTGTTTTAGATTCTATTGCTGCTCTAACTGCAACTGAGAGTCTTGTCGAAACGATGTCTAAGTATCCTGAATCTCCATGCTCTGGATTGGTATTTGTACCAAAGAAAACGGCCCAAGGTGTTGCTGAAATTTTTAGAGTTCTGGCCGACGACATCAAATCTTACAATAGAGAAAGAAAAAGTTATGAAATTGATTACCCTGTACTTCGGAAAGGTTTTCTGCACGAGACAAGATTTGTGCTTGGCAAAATTATTTTAGAAACCATGAGCAGTAGTATTTTGAAAGGGGAGGAATTTGTTCAGGAGGACTACCAACACCTGGAGCAGGAGAGCATTAAGGAAAATTGCAATAAGGGTAAAAAACGTGGCCTTAAACCTGATACTCCTAAACTAAAACAAGAGTTTGTGAAGAAACATAAGTTGGTCGAAAGGAAATGCAGACCGTTGGAGCAAGAGATGGACATTGATAACCAAGATGCTGTAATATTATCACAATTGGTTTCAGTTCCGAGACATAATGTAGAGAAGGAAACATGCCAGTTGCTTGAAGAGAAGGTGATAAAGAAAAAACATAAGGCAACGAAGCAGCAACTAAAGACAGTTGAGAAGAATAATGACAAGGAGAATGACAGTCTATCTAGTCTCTTGAGCGGTGAGAAGATACAGAAACGCAAAGAAGTACCAGACAAGGGGGAGAAAAGCAGTCAACTTCGAGTGTCTAGTCTCTTCAAGAAAATATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004652 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006139 GO:0006276 GO:0006378 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0016740 GO:0016772 GO:0016779 GO:0031123 GO:0031124 GO:0034641 GO:0043170 GO:0043412 GO:0043631 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0070566 GO:0071704 GO:0090304 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PolyA_pol PolyA_pol_RNAbd

Protein Analysis

665

Amino Acids

75.86

Weight (kDa)

9.37

Isoelectric Point (pI)

48.61

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PolyA_pol	PF01743	89 - 218	6.4e-25	Poly A polymerase head domain
PolyA_pol_RNAbd	PF12627	246 - 307	4.2e-15	Probable RNA and SrmB- binding site of polymerase A

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0002344)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G17580
fragaria_vesca	FvH4_1g10510 FvH4_1g10510 FvH4_1g10510 FvH4_1g10510 FvH4_1g29700
malus_domestica	MD02G1119000.v1.1 MD15G1233000.v1.1
prunus_persica	Prupe.7G180900_v2.0.a1 Prupe.7G180900_v2.0.a1 Prupe.7G180900_v2.0.a1 Prupe.7G180900_v2.0.a1 Prupe.7G180900_v2.0.a1 Prupe.7G180900_v2.0.a1 Prupe.7G180900_v2.0.a1 Prupe.7G180900_v2.0.a1 Prupe.7G180900_v2.0.a1 Prupe.7G180900_v2.0.a1
pyrus_communis	pycom02g09260 pycom02g09270 pycom15g20750
rosa_chinensis	RchiOBHm_Chr2g0097411 RchiOBHm_Chr2g0097511 RchiOBHm_Chr3g0465401
rosa_laevigata	RLG00000016724
rosa_multiflora	Rmu_sc0001060.1_g000002 Rmu_sc0004220.1_g000008 Rmu_sc0011781.1_g000006
rosa_roxburghii	Rroxscaffold_2G00144710
rosa_rugosa	Rorug02G0066800 Rorug02G0066800 Rorug02G0066800
rosa_samantha	Rh2AG113200 Rh2BG116200 Rh2BG116300 Rh2CG118200 Rh2CG118300 Rh2DG117300 Rh3BG141600 Rh3CG142700 Rh3DG142700
rosa_wichuraiana	Rw2G008870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	694
AccB7I	CCANNNNNTGG	2 cut(s)	1340, 1576
AccBSI	CCGCTC	1 cut(s)	1908
AciI	CCGC	7 cut(s)	5, 109, 279, 535, 629, 666, 1908
AclWI	GGATC	2 cut(s)	581, 633
AcoI	YGGCCR	1 cut(s)	1401
AcsI	RAATTY	7 cut(s)	309, 699, 741, 878, 955, 1386, 1550
AfaI	GTAC	3 cut(s)	1356, 1461, 1938
AfiI	CCNNNNNNNGG	6 cut(s)	118, 142, 1340, 1576, 1582, 1946
AflII	CTTAAG	2 cut(s)	347, 712
AflIII	ACRYGT	1 cut(s)	156
AgsI	TTSAA	9 cut(s)	263, 452, 739, 747, 883, 1232, 1540, 1805, 1987
AjiI	CACGTC	1 cut(s)	328
AjnI	CCWGG	2 cut(s)	182, 1575
AjuI	GAANNNNNNNTTGG	2 cut(s)	1661, 1693
AluBI	AGCT	6 cut(s)	341, 649, 764, 848, 1040, 1228
AluI	AGCT	6 cut(s)	341, 649, 764, 848, 1040, 1228
Alw21I	GWGCWC	1 cut(s)	379
Alw26I	GTCTC	8 cut(s)	67, 552, 752, 1149, 1478, 1762, 1904, 1985
Alw44I	GTGCAC	1 cut(s)	375
AlwI	GGATC	2 cut(s)	581, 633
Ama87I	CYCGRG	1 cut(s)	215
AoxI	GGCC	5 cut(s)	97, 1251, 1368, 1401, 1624
ApaLI	GTGCAC	1 cut(s)	375
ApeKI	GCWGC	5 cut(s)	722, 848, 914, 1277, 1843
ApoI	RAATTY	7 cut(s)	309, 699, 741, 878, 955, 1386, 1550
ArsI	GACNNNNNNTTYG	2 cut(s)	638, 670
Asp700I	GAANNNNTTC	3 cut(s)	527, 977, 1554
AspLEI	GCGC	1 cut(s)	695
AspS9I	GGNCC	4 cut(s)	98, 133, 204, 1369
AsuHPI	GGTGA	4 cut(s)	1064, 1090, 1825, 1922
AsuII	TTCGAA	1 cut(s)	247
AvaI	CYCGRG	1 cut(s)	215
AvaII	GGWCC	2 cut(s)	133, 204
BaeGI	GKGCMC	1 cut(s)	379
BauI	CACGAG	1 cut(s)	1481
Bbv12I	GWGCWC	1 cut(s)	379
BbvI	GCAGC	5 cut(s)	709, 835, 926, 1264, 1855
BccI	CCATC	5 cut(s)	229, 378, 811, 865, 1708
BceAI	ACGGC	1 cut(s)	1383
BcgI	CGANNNNNNTGC	2 cut(s)	353, 387
BciT130I	CCWGG	2 cut(s)	184, 1577
BciVI	GTATCC	2 cut(s)	451, 1332
BclI	TGATCA	1 cut(s)	330
BcoDI	GTCTC	8 cut(s)	67, 552, 752, 1149, 1478, 1762, 1904, 1985
BfaI	CTAG	3 cut(s)	1152, 1896, 1977
BfmI	CTRYAG	2 cut(s)	336, 1024
BfrI	CTTAAG	2 cut(s)	347, 712
BfuI	GTATCC	2 cut(s)	451, 1332
BisI	GCNGC	5 cut(s)	723, 849, 915, 1278, 1844
BlpI	GCTNAGC	1 cut(s)	852
BlsI	GCNGC	5 cut(s)	724, 850, 916, 1279, 1845
Bme1390I	CCNGG	2 cut(s)	184, 1577
Bme18I	GGWCC	2 cut(s)	133, 204
BmeT110I	CYCGRG	1 cut(s)	215
BmgBI	CACGTC	1 cut(s)	328
BmgT120I	GGNCC	4 cut(s)	98, 133, 204, 1369
BmiI	GGNNCC	2 cut(s)	123, 664
BmrFI	CCNGG	2 cut(s)	184, 1577
BmsI	GCATC	3 cut(s)	562, 1118, 1723
BpmI	CTGGAG	2 cut(s)	559, 1598
Bpu1102I	GCTNAGC	1 cut(s)	852
Bpu14I	TTCGAA	1 cut(s)	247
BpuEI	CTTGAG	4 cut(s)	256, 1062, 1149, 1924
BsaAI	YACGTR	1 cut(s)	707
BsaJI	CCNNGG	2 cut(s)	183, 1372
BsaXI	ACNNNNNCTCC	2 cut(s)	74, 104
Bsc4I	CCNNNNNNNGG	6 cut(s)	118, 142, 1340, 1576, 1582, 1946
Bse1I	ACTGG	3 cut(s)	444, 1068, 1795
BseBI	CCWGG	2 cut(s)	184, 1577
BseDI	CCNNGG	2 cut(s)	183, 1372
BseGI	GGATG	6 cut(s)	11, 287, 531, 782, 931, 1133
BseLI	CCNNNNNNNGG	6 cut(s)	118, 142, 1340, 1576, 1582, 1946
BseMII	CTCAG	9 cut(s)	31, 116, 117, 722, 843, 904, 965, 1179, 1284
BseNI	ACTGG	3 cut(s)	444, 1068, 1795
BseSI	GKGCMC	1 cut(s)	379
BseXI	GCAGC	5 cut(s)	709, 835, 926, 1264, 1855
BsgI	GTGCAG	1 cut(s)	1463
Bsh1285I	CGRYCG	1 cut(s)	656
BshFI	GGCC	5 cut(s)	99, 1253, 1370, 1403, 1626
BsiEI	CGRYCG	1 cut(s)	656
BsiHKAI	GWGCWC	1 cut(s)	379
BsiHKCI	CYCGRG	1 cut(s)	215
BslFI	GGGAC	2 cut(s)	91, 305
BslI	CCNNNNNNNGG	6 cut(s)	118, 142, 1340, 1576, 1582, 1946
BsmAI	GTCTC	8 cut(s)	67, 552, 752, 1149, 1478, 1762, 1904, 1985
BsmFI	GGGAC	2 cut(s)	91, 305
BsnI	GGCC	5 cut(s)	99, 1253, 1370, 1403, 1626
BsoBI	CYCGRG	1 cut(s)	215
Bsp119I	TTCGAA	1 cut(s)	247
Bsp1286I	GDGCHC	1 cut(s)	379
Bsp143I	GATC	5 cut(s)	330, 354, 586, 638, 1009
Bsp1720I	GCTNAGC	1 cut(s)	852
BspACI	CCGC	7 cut(s)	5, 109, 279, 535, 629, 666, 1908
BspANI	GGCC	5 cut(s)	99, 1253, 1370, 1403, 1626
BspCNI	CTCAG	9 cut(s)	30, 115, 118, 723, 844, 903, 964, 1180, 1285
BspLI	GGNNCC	2 cut(s)	123, 664
BspMAI	CTGCAG	1 cut(s)	1028
BspPI	GGATC	2 cut(s)	581, 633
BspQI	GCTCTTC	1 cut(s)	1218
BspT104I	TTCGAA	1 cut(s)	247
BspTI	CTTAAG	2 cut(s)	347, 712
BsrBI	CCGCTC	1 cut(s)	1908
BsrI	ACTGG	3 cut(s)	444, 1068, 1795
BssECI	CCNNGG	2 cut(s)	183, 1372
BssMI	GATC	5 cut(s)	330, 354, 586, 638, 1009
BssSI	CACGAG	1 cut(s)	1481
BssT1I	CCWWGG	1 cut(s)	1372
Bst2BI	CACGAG	1 cut(s)	1481
Bst2UI	CCWGG	2 cut(s)	184, 1577
Bst4CI	ACNGT	8 cut(s)	204, 457, 575, 654, 1006, 1701, 1858, 1889
Bst6I	CTCTTC	4 cut(s)	135, 1218, 1800, 1988
BstAFI	CTTAAG	2 cut(s)	347, 712
BstBAI	YACGTR	1 cut(s)	707
BstBI	TTCGAA	1 cut(s)	247
BstC8I	GCNNGC	1 cut(s)	551
BstENI	CCTNNNNNAGG	1 cut(s)	1580
BstF5I	GGATG	6 cut(s)	11, 287, 531, 782, 931, 1133
BstHHI	GCGC	1 cut(s)	695
BstKTI	GATC	5 cut(s)	333, 357, 589, 641, 1012
BstMAI	GTCTC	8 cut(s)	67, 552, 752, 1149, 1478, 1762, 1904, 1985
BstMBI	GATC	5 cut(s)	330, 354, 586, 638, 1009
BstMCI	CGRYCG	1 cut(s)	656
BstMWI	GCNNNNNNNGC	2 cut(s)	1046, 1286
BstNI	CCWGG	2 cut(s)	184, 1577
BstNSI	RCATGY	4 cut(s)	160, 553, 1212, 1794
BstSCI	CCNGG	2 cut(s)	182, 1575
BstSFI	CTRYAG	2 cut(s)	336, 1024
BstSLI	GKGCMC	1 cut(s)	379
BstV1I	GCAGC	5 cut(s)	709, 835, 926, 1264, 1855
BstX2I	RGATCY	1 cut(s)	638
BstYI	RGATCY	1 cut(s)	638
BsuI	GTATCC	2 cut(s)	451, 1332
BsuRI	GGCC	5 cut(s)	99, 1253, 1370, 1403, 1626
BtrI	CACGTC	1 cut(s)	328
BtsCI	GGATG	6 cut(s)	11, 287, 531, 782, 931, 1133
BtsIMutI	CAGTG	1 cut(s)	1061
Cac8I	GCNNGC	1 cut(s)	551
CfoI	GCGC	1 cut(s)	695
Cfr13I	GGNCC	4 cut(s)	98, 133, 204, 1369
CseI	GACGC	1 cut(s)	1091
Csp6I	GTAC	3 cut(s)	1355, 1460, 1937
CviQI	GTAC	3 cut(s)	1355, 1460, 1937
DpnI	GATC	5 cut(s)	332, 356, 588, 640, 1011
DpnII	GATC	5 cut(s)	330, 354, 586, 638, 1009
DraI	TTTAAA	1 cut(s)	682
EaeI	YGGCCR	1 cut(s)	1401
Eam1104I	CTCTTC	4 cut(s)	135, 1218, 1800, 1988
EarI	CTCTTC	4 cut(s)	135, 1218, 1800, 1988
EciI	GGCGGA	3 cut(s)	294, 644, 655
Eco130I	CCWWGG	1 cut(s)	1372
Eco32I	GATATC	1 cut(s)	1194
Eco47I	GGWCC	2 cut(s)	133, 204
Eco88I	CYCGRG	1 cut(s)	215
EcoNI	CCTNNNNNAGG	1 cut(s)	1580
EcoO109I	RGGNCCY	1 cut(s)	98
EcoRI	GAATTC	3 cut(s)	309, 878, 955
EcoRII	CCWGG	2 cut(s)	182, 1575
EcoRV	GATATC	1 cut(s)	1194
EcoT14I	CCWWGG	1 cut(s)	1372
EcoT22I	ATGCAT	1 cut(s)	555
ErhI	CCWWGG	1 cut(s)	1372
FalI	AAGNNNNNCTT	2 cut(s)	1071, 1103
FaqI	GGGAC	2 cut(s)	91, 305
FauI	CCCGC	1 cut(s)	116
FbaI	TGATCA	1 cut(s)	330
Fnu4HI	GCNGC	5 cut(s)	723, 849, 915, 1278, 1844
FokI	GGATG	5 cut(s)	294, 518, 769, 938, 1140
Fsp4HI	GCNGC	5 cut(s)	723, 849, 915, 1278, 1844
FspBI	CTAG	3 cut(s)	1152, 1896, 1977
FspI	TGCGCA	1 cut(s)	694
GlaI	GCGC	1 cut(s)	694
GluI	GCNGC	5 cut(s)	723, 849, 915, 1278, 1844
GsuI	CTGGAG	2 cut(s)	559, 1598
HaeIII	GGCC	5 cut(s)	99, 1253, 1370, 1403, 1626
HgaI	GACGC	1 cut(s)	1091
HhaI	GCGC	1 cut(s)	695
Hin6I	GCGC	1 cut(s)	693
HinP1I	GCGC	1 cut(s)	693
HincII	GTYRAC	2 cut(s)	1177, 1964
HindII	GTYRAC	2 cut(s)	1177, 1964
HinfI	GANTC	7 cut(s)	75, 128, 179, 211, 1268, 1297, 1328
HphI	GGTGA	4 cut(s)	1064, 1090, 1825, 1922
Hpy166II	GTNNAC	4 cut(s)	377, 1098, 1177, 1964
Hpy8I	GTNNAC	4 cut(s)	377, 1098, 1177, 1964
Hpy99I	CGWCG	1 cut(s)	1409
HpyAV	CCTTC	7 cut(s)	65, 89, 243, 248, 1026, 1777, 1804
HpyCH4III	ACNGT	8 cut(s)	204, 457, 575, 654, 1006, 1701, 1858, 1889
HpyCH4IV	ACGT	4 cut(s)	231, 327, 706, 1621
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1046, 1286
HpySE526I	ACGT	4 cut(s)	231, 327, 706, 1621
HspAI	GCGC	1 cut(s)	693
Ksp22I	TGATCA	1 cut(s)	330
Kzo9I	GATC	5 cut(s)	330, 354, 586, 638, 1009
LguI	GCTCTTC	1 cut(s)	1218
LmnI	GCTCC	4 cut(s)	668, 845, 1579, 1705
Lsp1109I	GCAGC	5 cut(s)	709, 835, 926, 1264, 1855
LweI	GCATC	3 cut(s)	562, 1118, 1723
MaeI	CTAG	3 cut(s)	1152, 1896, 1977
MaeII	ACGT	4 cut(s)	231, 327, 706, 1621
MaeIII	GTNAC	4 cut(s)	7, 487, 1000, 1070
MalI	GATC	5 cut(s)	332, 356, 588, 640, 1011
MbiI	CCGCTC	1 cut(s)	1908
MboI	GATC	5 cut(s)	330, 354, 586, 638, 1009
MboII	GAAGA	8 cut(s)	152, 771, 1235, 1678, 1817, 1876, 1927, 1975
MfeI	CAATTG	1 cut(s)	1751
MflI	RGATCY	1 cut(s)	638
MhlI	GDGCHC	1 cut(s)	379
MlyI	GAGTC	3 cut(s)	69, 137, 1306
MmeI	TCCRAC	2 cut(s)	367, 1683
Mph1103I	ATGCAT	1 cut(s)	555
MroXI	GAANNNNTTC	3 cut(s)	527, 977, 1554
MslI	CAYNNNNRTG	1 cut(s)	1207
MspA1I	CMGCKG	1 cut(s)	537
MspCI	CTTAAG	2 cut(s)	347, 712
MspR9I	CCNGG	2 cut(s)	184, 1577
MunI	CAATTG	1 cut(s)	1751
MvaI	CCWGG	2 cut(s)	184, 1577
MwoI	GCNNNNNNNGC	2 cut(s)	1046, 1286
NdeII	GATC	5 cut(s)	330, 354, 586, 638, 1009
NlaIV	GGNNCC	2 cut(s)	123, 664
NmuCI	GTSAC	2 cut(s)	1000, 1070
NsbI	TGCGCA	1 cut(s)	694
NsiI	ATGCAT	1 cut(s)	555
NspI	RCATGY	4 cut(s)	160, 553, 1212, 1794
NspV	TTCGAA	1 cut(s)	247
PaeI	GCATGC	1 cut(s)	553
PciI	ACATGT	1 cut(s)	156
PciSI	GCTCTTC	1 cut(s)	1218
PdmI	GAANNNNTTC	3 cut(s)	527, 977, 1554
PfeI	GAWTC	4 cut(s)	179, 211, 1268, 1328
PflMI	CCANNNNNTGG	2 cut(s)	1340, 1576
PkrI	GCNGC	5 cut(s)	724, 850, 916, 1279, 1845
PleI	GAGTC	3 cut(s)	69, 136, 1305
PpsI	GAGTC	3 cut(s)	69, 136, 1305
Ppu21I	YACGTR	1 cut(s)	707
PscI	ACATGT	1 cut(s)	156
Psp6I	CCWGG	2 cut(s)	182, 1575
PspGI	CCWGG	2 cut(s)	182, 1575
PspN4I	GGNNCC	2 cut(s)	123, 664
PspPI	GGNCC	4 cut(s)	98, 133, 204, 1369
PstI	CTGCAG	1 cut(s)	1028
PsuI	RGATCY	1 cut(s)	638
RsaI	GTAC	3 cut(s)	1356, 1461, 1938
RsaNI	GTAC	3 cut(s)	1355, 1460, 1937
RseI	CAYNNNNRTG	1 cut(s)	1207
SapI	GCTCTTC	1 cut(s)	1218
SatI	GCNGC	5 cut(s)	723, 849, 915, 1278, 1844
Sau3AI	GATC	5 cut(s)	330, 354, 586, 638, 1009
Sau96I	GGNCC	4 cut(s)	98, 133, 204, 1369
SchI	GAGTC	3 cut(s)	69, 137, 1306
ScrFI	CCNGG	2 cut(s)	184, 1577
SduI	GDGCHC	1 cut(s)	379
SfaNI	GCATC	3 cut(s)	562, 1118, 1723
SfcI	CTRYAG	2 cut(s)	336, 1024
SfuI	TTCGAA	1 cut(s)	247
SinI	GGWCC	2 cut(s)	133, 204
SmiMI	CAYNNNNRTG	1 cut(s)	1207
SmlI	CTYRAG	6 cut(s)	235, 347, 712, 1077, 1164, 1903
SmoI	CTYRAG	6 cut(s)	235, 347, 712, 1077, 1164, 1903
SphI	GCATGC	1 cut(s)	553
SsiI	CCGC	7 cut(s)	5, 109, 279, 535, 629, 666, 1908
SspI	AATATT	2 cut(s)	606, 1743
SspMI	CTAG	3 cut(s)	1152, 1896, 1977
StyD4I	CCNGG	2 cut(s)	182, 1575
StyI	CCWWGG	1 cut(s)	1372
TaaI	ACNGT	8 cut(s)	204, 457, 575, 654, 1006, 1701, 1858, 1889
TaiI	ACGT	4 cut(s)	234, 330, 709, 1624
TaqI	TCGA	8 cut(s)	161, 247, 556, 791, 1012, 1305, 1683, 1969
TaqII	GACCGA	1 cut(s)	121
TatI	WGTACW	1 cut(s)	1459
TfiI	GAWTC	4 cut(s)	179, 211, 1268, 1328
TscAI	CASTG	1 cut(s)	1068
TseFI	GTSAC	2 cut(s)	1000, 1070
TseI	GCWGC	5 cut(s)	722, 848, 914, 1277, 1843
Tsp45I	GTSAC	2 cut(s)	1000, 1070
TspDTI	ATGAA	9 cut(s)	153, 520, 771, 839, 899, 942, 986, 1191, 1458
TspRI	CASTG	1 cut(s)	1068
Van91I	CCANNNNNTGG	2 cut(s)	1340, 1576
Vha464I	CTTAAG	2 cut(s)	347, 712
VneI	GTGCAC	1 cut(s)	375
VpaK11BI	GGWCC	2 cut(s)	133, 204
XagI	CCTNNNNNAGG	1 cut(s)	1580
XapI	RAATTY	7 cut(s)	309, 699, 741, 878, 955, 1386, 1550
XceI	RCATGY	4 cut(s)	160, 553, 1212, 1794
XcmI	CCANNNNNNNNNTGG	1 cut(s)	793
XmnI	GAANNNNTTC	3 cut(s)	527, 977, 1554
XspI	CTAG	3 cut(s)	1152, 1896, 1977
Zsp2I	ATGCAT	1 cut(s)	555

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.