Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr02

Orthogroup ID

OG0004440

Physical Location & Seq

Genomic Coordinates Reverse (-)

13481718 .. 13484582

Gene Structure 2865 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD02G1160800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2865 bp

ATGCATTTTTCACTATGGAAGCCCTTATATCAGTGTGCTGCTCTGCTCATGGACAAGAAGAGCAGCGGCAGCAAACGGAAAGATGGGTCATCAGATTCAAATCTTGACATCCGGAAAACGACTTCAATTCTCCGAAAACTTCAGGAGAACAAGCTTAGGGAAGCTCTTGAGGAAGCATCGGAGGATGGATCACTCCTTAAATCCCAGGACGTGGAGTCTGAGCCCATTGGCAACCAAGAGGAGGGCCTTGGCCGGTCCAGATCCCTTGCTAGGCTCCACACCCAGCGCGAATTCCTCCGTGCCACTGCACTCGCGGCTGAGCGCATTTTCGAGTCAGAAGACGCCATCCCTGAGCTCCATGAAGCTCTATCGAAGTTCCTCACTATGTACCCGAAGTACCAGTCTTCGGAGAAGATCGATCAGCTGAGGCTTGAGGAGTACTCACATTTGTCTCCAAAGGTATGCCTTGATTACTGTGGTTTCGGGCTTTTTTCGTATCTTCAGACAGTGCACTATTGGGAGTCTTCTACATTTAGTTTGTCTGAGATAACTGCAAATTTGAATAATCATGCGCTTTATGGCGGTGCTGAGAAAGGCACTGTGGAACATGATATAAAGGCTAGGATTATGGATTATTTGAACATTCCTGAGAATGAGTATGGTCTTGTGTTTACTGTGAGTAGAGGTTCTGCATTTAAATTGTTGGCCGAATCATACCCTTTCCAAACGAACAAAAAATTGTTGACTATGTTTGATTATGAGAGCCAGTCTGTGAATTGGATGGTTCAGAGTGCCAGAGAGAAAGGTGCAAAGGTTTACAGTGCCTGGTTTAAGTGGCCAACCCTCAAACTGTGCTCAACCGATTTGAGAAAGCAAATTACGAACAAAAAGAAGAAGAAAAAGGATGCTGCGACTGGTCTTTTTGTTTTTCCAGTTCAGTCTAGAGTGACCGGGGCCAAGTATTCTTACCAGTGGATGGCATTGGCACAACAGAACAATTGGCATGTCTTGCTTGATGCTGGGTCATTGGGTCCCAAGGACATGGATTCGCTTGGTTTATCCTTGTTCAGGCCTGATTTCATCATCACATCATTTTACAGGGTCTTTGGGTTTGATCCAACTGGATTTGGCTGCCTTCTGATTAAGAAATCAGTTATCGGATGCCTTCAAAATCAGTCGGGGTCAACTGGGTCTGGAATGGTGAAGATTACCCCTGAATACCCAATGTATCTTAGTGATTCTATAGATGGTCTGGACAAGTTGGGTGGAATTCAAGATGATCATGTAGCTGAAAATGGTGAGAAACCCTCCGACTCTCGCCATGGATCACAGATGCCTGCTTTCTCTGGAGCATACACGGCTGCTCAGGTGAGGGATGTATTTGAGACTGAGATGGATCAAGATAACAGCTCTGACAGGGATGGAACTAGCACCATATTTGAAGAGACGGAAAGCATCTCAGTAGGGGACATGATGAAGAGTCCTGTGTTCAGTGAAGACGAGTCGTCAGACAATTCAATTTGGATTGATTTGGGTCAGAGTCCACTGGGTTCTGACAAATCAGGCCAGATTCACAAACAGAAGATTACCTCTCCTTTGCCTCCATTTTGGCTTCTTGGGAGGAAGAACCATAAGCAACTTTCCCCAAAACCTACTTCTAATATACATGGCAATCCAATATATGATGACAAAGAGGTAAATTCAGGGTCACACGATGACTCCCATGTGCTATCATTTGACGCCGCTGTCTTATCAGTTTCAATGGATTTGGACCGTGTCAAGGAAGTCCCTGAAGAACAATTTGCAGAAGCCAGCCCCACTTTACATAATGGTAACATTGGTTCTGATCATCATAACGGGGAGTTCCAGGAAGAAGGTGGAACCAGCAAACCTACTGGGTCAGTTTTGAACTCTGCTACAAATGGGTTTTGTCCCAAGAATTCAACTTCAACGTCTCAGCATTGTAGCCTAGAGAACGGATCAGCCACAGAAAGTTGCGCAGAGATAAGAGAGAGTGCCATAAGAAGAGAAACTGAAGGTGAATTTAGGTTGTTAGGAAGAAGGGAGGGGAGTAAATTTACTAATGGTCGATTATTTGGTTTGGAAGAGACTGAAGCACCAAGCAGGGGGAGAAGGGTGTCCTTTAGCGTAGAAGATAACCGTAGAGATCATGGAAGCCATAGTCTTGAGACAGGAGAGATATCTGCAGCTAGTCTGGACGACGAAGATTACACCAGTGATGGGGAATATGGTGATGGACAAGACTGGGACAGGAGGGAACCGGAGATCACATGCCGACATATTGATCATGTTAATATGTTGGGCCTCAATAAAACCACCTCCCGATTGCGATTTTTGATCAACTGGCTTGTGACCTCGTTACTGCAGTTAAGGTTACCTGGTTCAGATGGAGACAGCAGAACAAATTTGGTTCACATCTATGGGCCAAAAATAAAATATGAAAGAGGTGCAGCTGTGGCTTTCAATGTGAGGGACCAAAACAGAGGGTTGATCAATCCTGAAGTTGTTCAGAAGCTGGCTGAAAAAGAAGGTATCGCTCTTGGCATTGGTTTCCTCAATCACATACGAATCATGGATACCTCGAGACAGCATGGGGCTTCGAATCTTCAAGATACTACGCTGTGCAGGCCGATGGAAAATGGAAGAAAAGGTGGGTTTGTACGGGTTGAGGTTGTAACAGCTTCTTTGGGTTTTCTCACCAACTTTGAGGATGTTTACAAGCTGTGGGCTTTTTTGGCCAAATTTCTAAATCCGGCCTTTGTCAGGGAGGGTGGGCTGTCTACTGTCGAAGAAGAATCTGAGACAAAATCTGAAGCATCTCACGATGAGATTGTTCCGAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00790 map00790

Pfam Domains

Protein Families

No domains found.

Protein Analysis

955

Amino Acids

106.39

Weight (kDa)

5.49

Isoelectric Point (pI)

46.01

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004440)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G23520
fragaria_vesca	FvH4_1g14760
malus_domestica	MD02G1160700.v1.1 MD02G1160800.v1.1 MD15G1274900.v1.1
prunus_persica	Prupe.7G142800_v2.0.a1 Prupe.7G142900_v2.0.a1
pyrus_communis	pycom02g12670 pycom02g12680 pycom02g12690 pycom15g23800
rosa_chinensis	RchiOBHm_Chr2g0103691 RchiOBHm_Chr2g0103701
rosa_laevigata	RLG00000017249 RLG00000017250
rosa_multiflora	Rmu_sc0001852.1_g000009 Rmu_sc0001852.1_g000010
rosa_roxburghii	Rroxscaffold_2G00139470 Rroxscaffold_2G00139480 Rroxscaffold_5G00365360
rosa_rugosa	Rorug02G0116600 Rorug02G0116700
rosa_samantha	Rh2AG165300 Rh2AG165400 Rh2BG172500 Rh2BG172600 Rh2CG171400 Rh2CG171500 Rh2DG170900 Rh2DG171000
rosa_wichuraiana	Rw2G012950 Rw2G012960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1745
Acc16I	TGCGCA	1 cut(s)	1999
AccB7I	CCANNNNNTGG	2 cut(s)	211, 976
AccI	GTMKAC	1 cut(s)	2801
AccII	CGCG	2 cut(s)	288, 314
AccIII	TCCGGA	1 cut(s)	111
AciI	CCGC	4 cut(s)	66, 314, 582, 1743
AclWI	GGATC	6 cut(s)	196, 255, 1109, 1333, 1404, 1987
AcoI	YGGCCR	4 cut(s)	250, 705, 836, 2757
AcsI	RAATTY	9 cut(s)	290, 556, 1269, 1699, 1939, 2042, 2075, 2425, 2762
AcuI	CTGAAG	7 cut(s)	125, 485, 1812, 2055, 2133, 2541, 2853
AcyI	GRCGYC	2 cut(s)	342, 1740
AfaI	GTAC	4 cut(s)	389, 398, 440, 2682
AhdI	GACNNNNNGTC	2 cut(s)	214, 1504
AjiI	CACGTC	1 cut(s)	211
AjnI	CCWGG	4 cut(s)	204, 824, 1866, 2398
AjuI	GAANNNNNNNTTGG	2 cut(s)	1639, 1671
Alw21I	GWGCWC	3 cut(s)	357, 513, 857
Alw26I	GTCTC	9 cut(s)	456, 1379, 1439, 1959, 2102, 2183, 2406, 2599, 2816
Alw44I	GTGCAC	1 cut(s)	509
AlwI	GGATC	6 cut(s)	196, 255, 1109, 1333, 1404, 1987
AlwNI	CAGNNNCTG	2 cut(s)	825, 2536
Ama87I	CYCGRG	1 cut(s)	2602
Aor13HI	TCCGGA	1 cut(s)	111
ApaLI	GTGCAC	1 cut(s)	509
ApeKI	GCWGC	8 cut(s)	38, 63, 69, 908, 1131, 1361, 2207, 2471
ApoI	RAATTY	9 cut(s)	290, 556, 1269, 1699, 1939, 2042, 2075, 2425, 2762
ArsI	GACNNNNNNTTYG	2 cut(s)	386, 418
Asp700I	GAANNNNTTC	1 cut(s)	2526
AspLEI	GCGC	4 cut(s)	288, 324, 574, 2000
AspS9I	GGNCC	8 cut(s)	244, 255, 954, 1031, 1771, 2323, 2444, 2494
AsuC2I	CCSGG	1 cut(s)	952
AsuHPI	GGTGA	6 cut(s)	1213, 1310, 1381, 2051, 2264, 2710
AsuII	TTCGAA	1 cut(s)	2621
AvaI	CYCGRG	1 cut(s)	2602
AvaII	GGWCC	4 cut(s)	255, 1031, 1771, 2494
BaeGI	GKGCMC	1 cut(s)	513
BalI	TGGCCA	2 cut(s)	838, 2759
BanII	GRGCYC	2 cut(s)	225, 357
BbsI	GAAGAC	4 cut(s)	345, 396, 516, 1503
Bbv12I	GWGCWC	3 cut(s)	357, 513, 857
BbvCI	CCTCAGC	1 cut(s)	425
BbvI	GCAGC	8 cut(s)	25, 75, 81, 895, 1118, 1348, 2219, 2483
BceAI	ACGGC	1 cut(s)	1374
BciT130I	CCWGG	4 cut(s)	206, 826, 1868, 2400
BciVI	GTATCC	1 cut(s)	2590
BclI	TGATCA	5 cut(s)	1279, 1846, 2305, 2358, 2511
BcnI	CCSGG	1 cut(s)	952
BcoDI	GTCTC	9 cut(s)	456, 1379, 1439, 1959, 2102, 2183, 2406, 2599, 2816
BfaI	CTAG	6 cut(s)	270, 621, 942, 1428, 1970, 2211
BfmI	CTRYAG	3 cut(s)	1242, 2205, 2384
BfuI	GTATCC	1 cut(s)	2590
BlpI	GCTNAGC	1 cut(s)	318
BmcAI	AGTACT	1 cut(s)	440
Bme1390I	CCNGG	5 cut(s)	206, 826, 952, 1868, 2400
Bme18I	GGWCC	4 cut(s)	255, 1031, 1771, 2494
BmeRI	GACNNNNNGTC	2 cut(s)	214, 1504
BmeT110I	CYCGRG	1 cut(s)	2602
BmgBI	CACGTC	1 cut(s)	211
BmgT120I	GGNCC	8 cut(s)	244, 255, 954, 1031, 1771, 2323, 2444, 2494
BmiI	GGNNCC	7 cut(s)	275, 955, 1032, 1033, 1882, 2280, 2495
BmrFI	CCNGG	5 cut(s)	206, 826, 952, 1868, 2400
BmrI	ACTGGG	4 cut(s)	1197, 1556, 1905, 2275
BmsI	GCATC	7 cut(s)	185, 895, 1006, 1151, 1323, 1464, 2846
BmuI	ACTGGG	4 cut(s)	1197, 1556, 1905, 2275
BpiI	GAAGAC	4 cut(s)	345, 396, 516, 1503
BplI	GAGNNNNNCTC	4 cut(s)	425, 457, 1292, 1324
BpmI	CTGGAG	1 cut(s)	1368
Bpu10I	CCTNAGC	4 cut(s)	155, 351, 425, 1365
Bpu1102I	GCTNAGC	1 cut(s)	318
Bpu14I	TTCGAA	1 cut(s)	2621
BpuEI	CTTGAG	3 cut(s)	188, 452, 2207
BpuMI	CCSGG	1 cut(s)	952
Bsa29I	ATCGAT	1 cut(s)	417
BsaBI	GATNNNNATC	1 cut(s)	99
BsaHI	GRCGYC	2 cut(s)	342, 1740
BsaJI	CCNNGG	5 cut(s)	204, 247, 951, 1035, 1321
BsaWI	WCCGGW	2 cut(s)	111, 2281
BsaXI	ACNNNNNCTCC	2 cut(s)	1703, 1733
Bse118I	RCCGGY	1 cut(s)	252
Bse8I	GATNNNNATC	1 cut(s)	99
BseAI	TCCGGA	1 cut(s)	111
BseBI	CCWGG	4 cut(s)	206, 826, 1868, 2400
BseCI	ATCGAT	1 cut(s)	417
BseDI	CCNNGG	5 cut(s)	204, 247, 951, 1035, 1321
BseJI	GATNNNNATC	1 cut(s)	99
BseRI	GAGGAG	2 cut(s)	254, 449
BseSI	GKGCMC	1 cut(s)	513
BseXI	GCAGC	8 cut(s)	25, 75, 81, 895, 1118, 1348, 2219, 2483
BseYI	CCCAGC	2 cut(s)	282, 1019
BsgI	GTGCAG	3 cut(s)	291, 2490, 2665
Bsh1236I	CGCG	2 cut(s)	288, 314
BshVI	ATCGAT	1 cut(s)	417
BsiHKAI	GWGCWC	3 cut(s)	357, 513, 857
BsiHKCI	CYCGRG	1 cut(s)	2602
BsiSI	CCGG	5 cut(s)	112, 253, 951, 2282, 2774
BslFI	GGGAC	6 cut(s)	1017, 1481, 1772, 1917, 2282, 2507
BsmAI	GTCTC	9 cut(s)	456, 1379, 1439, 1959, 2102, 2183, 2406, 2599, 2816
BsmBI	CGTCTC	2 cut(s)	1439, 1959
BsmFI	GGGAC	6 cut(s)	1017, 1481, 1772, 1917, 2282, 2507
BsoBI	CYCGRG	1 cut(s)	2602
Bsp119I	TTCGAA	1 cut(s)	2621
Bsp1286I	GDGCHC	4 cut(s)	225, 357, 513, 857
Bsp13I	TCCGGA	1 cut(s)	111
Bsp1720I	GCTNAGC	1 cut(s)	318
Bsp19I	CCATGG	1 cut(s)	1321
BspACI	CCGC	4 cut(s)	66, 314, 582, 1743
BspDI	ATCGAT	1 cut(s)	417
BspEI	TCCGGA	1 cut(s)	111
BspFNI	CGCG	2 cut(s)	288, 314
BspLI	GGNNCC	7 cut(s)	275, 955, 1032, 1033, 1882, 2280, 2495
BspMAI	CTGCAG	2 cut(s)	2209, 2388
BspPI	GGATC	6 cut(s)	196, 255, 1109, 1333, 1404, 1987
BspQI	GCTCTTC	1 cut(s)	53
BspT104I	TTCGAA	1 cut(s)	2621
BsrFI	RCCGGY	1 cut(s)	252
BssAI	RCCGGY	1 cut(s)	252
BssECI	CCNNGG	5 cut(s)	204, 247, 951, 1035, 1321
BssNI	GRCGYC	2 cut(s)	342, 1740
BssT1I	CCWWGG	3 cut(s)	247, 1035, 1321
Bst2UI	CCWGG	4 cut(s)	206, 826, 1868, 2400
Bst4CI	ACNGT	9 cut(s)	476, 508, 601, 676, 821, 852, 1775, 2162, 2806
Bst6I	CTCTTC	5 cut(s)	53, 1437, 1472, 2020, 2100
BstACI	GRCGYC	2 cut(s)	342, 1740
BstAPI	GCANNNNNTGC	1 cut(s)	1009
BstBI	TTCGAA	1 cut(s)	2621
BstC8I	GCNNGC	4 cut(s)	1338, 1813, 2538, 2648
BstDSI	CCRYGG	1 cut(s)	1321
BstEII	GGTNACC	1 cut(s)	2394
BstENI	CCTNNNNNAGG	2 cut(s)	1066, 2782
BstFNI	CGCG	2 cut(s)	288, 314
BstHHI	GCGC	4 cut(s)	288, 324, 574, 2000
BstMAI	GTCTC	9 cut(s)	456, 1379, 1439, 1959, 2102, 2183, 2406, 2599, 2816
BstMWI	GCNNNNNNNGC	7 cut(s)	69, 314, 1009, 1358, 2477, 2647, 2756
BstNI	CCWGG	4 cut(s)	206, 826, 1868, 2400
BstNSI	RCATGY	2 cut(s)	1007, 2295
BstPI	GGTNACC	1 cut(s)	2394
BstSCI	CCNGG	5 cut(s)	204, 824, 950, 1866, 2398
BstSFI	CTRYAG	3 cut(s)	1242, 2205, 2384
BstSLI	GKGCMC	1 cut(s)	513
BstUI	CGCG	2 cut(s)	288, 314
BstV1I	GCAGC	8 cut(s)	25, 75, 81, 895, 1118, 1348, 2219, 2483
BstV2I	GAAGAC	4 cut(s)	345, 396, 516, 1503
BstX2I	RGATCY	1 cut(s)	260
BstXI	CCANNNNNNTGG	1 cut(s)	1042
BstYI	RGATCY	1 cut(s)	260
Bsu15I	ATCGAT	1 cut(s)	417
BsuI	GTATCC	1 cut(s)	2590
BsuTUI	ATCGAT	1 cut(s)	417
BtgI	CCRYGG	1 cut(s)	1321
BtrI	CACGTC	1 cut(s)	211
BtsI	GCAGTG	1 cut(s)	303
BtsIMutI	CAGTG	9 cut(s)	38, 303, 513, 597, 826, 977, 1498, 1544, 2242
Cac8I	GCNNGC	4 cut(s)	1338, 1813, 2538, 2648
CaiI	CAGNNNCTG	2 cut(s)	825, 2536
CfoI	GCGC	4 cut(s)	288, 324, 574, 2000
Cfr10I	RCCGGY	1 cut(s)	252
Cfr13I	GGNCC	8 cut(s)	244, 255, 954, 1031, 1771, 2323, 2444, 2494
ClaI	ATCGAT	1 cut(s)	417
CseI	GACGC	2 cut(s)	350, 1748
CsiI	ACCWGGT	1 cut(s)	2398
Csp6I	GTAC	4 cut(s)	388, 397, 439, 2681
CspCI	CAANNNNNGTGG	2 cut(s)	1246, 1281
CviQI	GTAC	4 cut(s)	388, 397, 439, 2681
DraI	TTTAAA	1 cut(s)	697
DrdI	GACNNNNNNGTC	1 cut(s)	1745
DriI	GACNNNNNGTC	2 cut(s)	214, 1504
DseDI	GACNNNNNNGTC	1 cut(s)	1745
EaeI	YGGCCR	4 cut(s)	250, 705, 836, 2757
Eam1104I	CTCTTC	5 cut(s)	53, 1437, 1472, 2020, 2100
Eam1105I	GACNNNNNGTC	2 cut(s)	214, 1504
EarI	CTCTTC	5 cut(s)	53, 1437, 1472, 2020, 2100
Ecl136II	GAGCTC	1 cut(s)	355
Eco130I	CCWWGG	3 cut(s)	247, 1035, 1321
Eco147I	AGGCCT	1 cut(s)	1072
Eco24I	GRGCYC	2 cut(s)	225, 357
Eco32I	GATATC	1 cut(s)	2202
Eco47I	GGWCC	4 cut(s)	255, 1031, 1771, 2494
Eco53kI	GAGCTC	1 cut(s)	355
Eco57I	CTGAAG	7 cut(s)	125, 485, 1812, 2055, 2133, 2541, 2853
Eco88I	CYCGRG	1 cut(s)	2602
Eco91I	GGTNACC	1 cut(s)	2394
EcoICRI	GAGCTC	1 cut(s)	355
EcoNI	CCTNNNNNAGG	2 cut(s)	1066, 2782
EcoO109I	RGGNCCY	2 cut(s)	244, 1031
EcoO65I	GGTNACC	1 cut(s)	2394
EcoRI	GAATTC	3 cut(s)	290, 1269, 1939
EcoRII	CCWGG	4 cut(s)	204, 824, 1866, 2398
EcoRV	GATATC	1 cut(s)	2202
EcoT14I	CCWWGG	3 cut(s)	247, 1035, 1321
EcoT22I	ATGCAT	1 cut(s)	6
EcoT38I	GRGCYC	2 cut(s)	225, 357
ErhI	CCWWGG	3 cut(s)	247, 1035, 1321
Esp3I	CGTCTC	2 cut(s)	1439, 1959
FaqI	GGGAC	6 cut(s)	1017, 1481, 1772, 1917, 2282, 2507
FbaI	TGATCA	5 cut(s)	1279, 1846, 2305, 2358, 2511
FblI	GTMKAC	1 cut(s)	2801
FriOI	GRGCYC	2 cut(s)	225, 357
FspBI	CTAG	6 cut(s)	270, 621, 942, 1428, 1970, 2211
FspI	TGCGCA	1 cut(s)	1999
GlaI	GCGC	4 cut(s)	287, 323, 573, 1999
GsaI	CCCAGC	2 cut(s)	286, 1023
GsuI	CTGGAG	1 cut(s)	1368
HapII	CCGG	5 cut(s)	112, 253, 951, 2282, 2774
HgaI	GACGC	2 cut(s)	350, 1748
HhaI	GCGC	4 cut(s)	288, 324, 574, 2000
Hin1I	GRCGYC	2 cut(s)	342, 1740
Hin6I	GCGC	4 cut(s)	286, 322, 572, 1998
HinP1I	GCGC	4 cut(s)	286, 322, 572, 1998
HincII	GTYRAC	2 cut(s)	744, 1185
HindII	GTYRAC	2 cut(s)	744, 1185
HindIII	AAGCTT	1 cut(s)	152
HpaII	CCGG	5 cut(s)	112, 253, 951, 2282, 2774
HphI	GGTGA	6 cut(s)	1213, 1310, 1381, 2051, 2264, 2710
Hpy166II	GTNNAC	9 cut(s)	511, 672, 744, 817, 1185, 1544, 2434, 2737, 2802
Hpy8I	GTNNAC	9 cut(s)	511, 672, 744, 817, 1185, 1544, 2434, 2737, 2802
Hpy99I	CGWCG	1 cut(s)	2225
HpyAV	CCTTC	7 cut(s)	1145, 1175, 1868, 2030, 2055, 2127, 2543
HpyCH4III	ACNGT	9 cut(s)	476, 508, 601, 676, 821, 852, 1775, 2162, 2806
HpyCH4IV	ACGT	2 cut(s)	210, 1952
HpyF10VI	GCNNNNNNNGC	7 cut(s)	69, 314, 1009, 1358, 2477, 2647, 2756
HpySE526I	ACGT	2 cut(s)	210, 1952
Hsp92I	GRCGYC	2 cut(s)	342, 1740
HspAI	GCGC	4 cut(s)	286, 322, 572, 1998
KflI	GGGWCCC	1 cut(s)	1031
Kpn2I	TCCGGA	1 cut(s)	111
Ksp22I	TGATCA	5 cut(s)	1279, 1846, 2305, 2358, 2511
LguI	GCTCTTC	1 cut(s)	53
LmnI	GCTCC	3 cut(s)	279, 360, 1349
Lsp1109I	GCAGC	8 cut(s)	25, 75, 81, 895, 1118, 1348, 2219, 2483
LweI	GCATC	7 cut(s)	185, 895, 1006, 1151, 1323, 1464, 2846
MabI	ACCWGGT	1 cut(s)	2398
MaeI	CTAG	6 cut(s)	270, 621, 942, 1428, 1970, 2211
MaeII	ACGT	2 cut(s)	210, 1952
MaeIII	GTNAC	7 cut(s)	946, 1707, 1832, 2371, 2379, 2394, 2695
MfeI	CAATTG	1 cut(s)	997
MflI	RGATCY	1 cut(s)	260
MhlI	GDGCHC	4 cut(s)	225, 357, 513, 857
MlsI	TGGCCA	2 cut(s)	838, 2759
MluNI	TGGCCA	2 cut(s)	838, 2759
MlyI	GAGTC	8 cut(s)	224, 341, 530, 1307, 1489, 1511, 1549, 1712
MmeI	TCCRAC	2 cut(s)	1142, 1335
Mox20I	TGGCCA	2 cut(s)	838, 2759
Mph1103I	ATGCAT	1 cut(s)	6
MroI	TCCGGA	1 cut(s)	111
MroXI	GAANNNNTTC	1 cut(s)	2526
MscI	TGGCCA	2 cut(s)	838, 2759
MseI	TTAA	6 cut(s)	198, 696, 831, 1143, 2313, 2390
MslI	CAYNNNNRTG	1 cut(s)	2439
Msp20I	TGGCCA	2 cut(s)	838, 2759
MspA1I	CMGCKG	4 cut(s)	66, 424, 1745, 2474
MspI	CCGG	5 cut(s)	112, 253, 951, 2282, 2774
MspR9I	CCNGG	5 cut(s)	206, 826, 952, 1868, 2400
MunI	CAATTG	1 cut(s)	997
MvaI	CCWGG	4 cut(s)	206, 826, 1868, 2400
MvnI	CGCG	2 cut(s)	288, 314
MwoI	GCNNNNNNNGC	7 cut(s)	69, 314, 1009, 1358, 2477, 2647, 2756
NciI	CCSGG	1 cut(s)	952
NcoI	CCATGG	1 cut(s)	1321
NlaIV	GGNNCC	7 cut(s)	275, 955, 1032, 1033, 1882, 2280, 2495
NmuCI	GTSAC	3 cut(s)	946, 1707, 2371
NsbI	TGCGCA	1 cut(s)	1999
NsiI	ATGCAT	1 cut(s)	6
NspI	RCATGY	2 cut(s)	1007, 2295
NspV	TTCGAA	1 cut(s)	2621
PaeR7I	CTCGAG	1 cut(s)	2602
PceI	AGGCCT	1 cut(s)	1072
PciSI	GCTCTTC	1 cut(s)	53
PdmI	GAANNNNTTC	1 cut(s)	2526
PfeI	GAWTC	8 cut(s)	95, 710, 1046, 1238, 1570, 2589, 2623, 2816
PflFI	GACNNNGTC	1 cut(s)	1775
PflMI	CCANNNNNTGG	2 cut(s)	211, 976
PfoI	TCCNGGA	1 cut(s)	1866
PleI	GAGTC	8 cut(s)	223, 340, 529, 1307, 1488, 1510, 1548, 1712
PpsI	GAGTC	8 cut(s)	223, 340, 529, 1307, 1488, 1510, 1548, 1712
PpuMI	RGGWCCY	1 cut(s)	1031
Psp124BI	GAGCTC	1 cut(s)	357
Psp5II	RGGWCCY	1 cut(s)	1031
Psp6I	CCWGG	4 cut(s)	204, 824, 1866, 2398
PspEI	GGTNACC	1 cut(s)	2394
PspFI	CCCAGC	2 cut(s)	282, 1019
PspGI	CCWGG	4 cut(s)	204, 824, 1866, 2398
PspN4I	GGNNCC	7 cut(s)	275, 955, 1032, 1033, 1882, 2280, 2495
PspPI	GGNCC	8 cut(s)	244, 255, 954, 1031, 1771, 2323, 2444, 2494
PspPPI	RGGWCCY	1 cut(s)	1031
PsrI	GAACNNNNNNTAC	2 cut(s)	1825, 1857
PstI	CTGCAG	2 cut(s)	2209, 2388
PstNI	CAGNNNCTG	2 cut(s)	825, 2536
PsuI	RGATCY	1 cut(s)	260
PsyI	GACNNNGTC	1 cut(s)	1775
PvuII	CAGCTG	2 cut(s)	424, 2474
RsaI	GTAC	4 cut(s)	389, 398, 440, 2682
RsaNI	GTAC	4 cut(s)	388, 397, 439, 2681
RseI	CAYNNNNRTG	1 cut(s)	2439
SacI	GAGCTC	1 cut(s)	357
SapI	GCTCTTC	1 cut(s)	53
SaqAI	TTAA	6 cut(s)	198, 696, 831, 1143, 2313, 2390
Sau96I	GGNCC	8 cut(s)	244, 255, 954, 1031, 1771, 2323, 2444, 2494
ScaI	AGTACT	1 cut(s)	440
SchI	GAGTC	8 cut(s)	224, 341, 530, 1307, 1489, 1511, 1549, 1712
ScrFI	CCNGG	5 cut(s)	206, 826, 952, 1868, 2400
SduI	GDGCHC	4 cut(s)	225, 357, 513, 857
SexAI	ACCWGGT	1 cut(s)	2398
SfaNI	GCATC	7 cut(s)	185, 895, 1006, 1151, 1323, 1464, 2846
SfcI	CTRYAG	3 cut(s)	1242, 2205, 2384
Sfr274I	CTCGAG	1 cut(s)	2602
SfuI	TTCGAA	1 cut(s)	2621
SinI	GGWCC	4 cut(s)	255, 1031, 1771, 2494
SlaI	CTCGAG	1 cut(s)	2602
SmiI	ATTTAAAT	1 cut(s)	697
SmiMI	CAYNNNNRTG	1 cut(s)	2439
SmlI	CTYRAG	4 cut(s)	167, 431, 2186, 2602
SmoI	CTYRAG	4 cut(s)	167, 431, 2186, 2602
SseBI	AGGCCT	1 cut(s)	1072
SsiI	CCGC	4 cut(s)	66, 314, 582, 1743
SspMI	CTAG	6 cut(s)	270, 621, 942, 1428, 1970, 2211
SstI	GAGCTC	1 cut(s)	357
StuI	AGGCCT	1 cut(s)	1072
StyD4I	CCNGG	5 cut(s)	204, 824, 950, 1866, 2398
StyI	CCWWGG	3 cut(s)	247, 1035, 1321
SwaI	ATTTAAAT	1 cut(s)	697
TaaI	ACNGT	9 cut(s)	476, 508, 601, 676, 821, 852, 1775, 2162, 2806
TaiI	ACGT	2 cut(s)	213, 1955
TaqI	TCGA	7 cut(s)	330, 371, 417, 2089, 2603, 2621, 2808
TatI	WGTACW	1 cut(s)	438
TauI	GCSGC	3 cut(s)	69, 317, 1745
TfiI	GAWTC	8 cut(s)	95, 710, 1046, 1238, 1570, 2589, 2623, 2816
Tru1I	TTAA	6 cut(s)	198, 696, 831, 1143, 2313, 2390
Tru9I	TTAA	6 cut(s)	198, 696, 831, 1143, 2313, 2390
TscAI	CASTG	9 cut(s)	38, 310, 513, 604, 826, 977, 1498, 1551, 2242
TseFI	GTSAC	3 cut(s)	946, 1707, 2371
TseI	GCWGC	8 cut(s)	38, 63, 69, 908, 1131, 1361, 2207, 2471
Tsp45I	GTSAC	3 cut(s)	946, 1707, 2371
TspDTI	ATGAA	4 cut(s)	375, 1069, 1490, 2475
TspGWI	ACGGA	4 cut(s)	91, 287, 1463, 1992
TspRI	CASTG	9 cut(s)	38, 310, 513, 604, 826, 977, 1498, 1551, 2242
Tth111I	GACNNNGTC	1 cut(s)	1775
Van91I	CCANNNNNTGG	2 cut(s)	211, 976
VneI	GTGCAC	1 cut(s)	509
VpaK11BI	GGWCC	4 cut(s)	255, 1031, 1771, 2494
XagI	CCTNNNNNAGG	2 cut(s)	1066, 2782
XapI	RAATTY	9 cut(s)	290, 556, 1269, 1699, 1939, 2042, 2075, 2425, 2762
XbaI	TCTAGA	1 cut(s)	941
XceI	RCATGY	2 cut(s)	1007, 2295
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1874
XhoI	CTCGAG	1 cut(s)	2602
XmiI	GTMKAC	1 cut(s)	2801
XmnI	GAANNNNTTC	1 cut(s)	2526
XspI	CTAG	6 cut(s)	270, 621, 942, 1428, 1970, 2211
ZrmI	AGTACT	1 cut(s)	440
Zsp2I	ATGCAT	1 cut(s)	6

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.