Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr2

Orthogroup ID

OG0004440

Physical Location & Seq

Genomic Coordinates Reverse (-)

9264957 .. 9267838

Gene Structure 2882 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom02g12690.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2445 bp

ATGCATTTTTCACTATGGAAGCCCTTATATCAGTGTGCTGCTCTGCTCATGGACAAGAAGAGCAGCGGCAGCAAACGGAAAGATGGGTCATCGGATTCAAATCTTGACATCCGGAAAACGACCTCAATTCTCCGAAAACTTCAGGAGAACAAGCTTAGGGAAGCTCTTGAGGAAGCATCGGAGGATGGATCACTCCTTAAATCCCAGGACATGGAGTCTGAGCCCCTTGGCAACCAAGAGGAGGGCCTTGGCCGGTCCAGATCCCTTGCTAGGCTCCACACCCAGCGCGAATTCCTCCGTGCCACTGCACTCGCGGCTGAGCGCATATTCGAGTCAGAAGACGCCATCCCTGAACTCCGTGAAGCTCTATCGAAGTTCCTCACTATGTACCCGAAATACCAGTCTTCGGAGAAGATCGATCAGCTGAGGCTTGAGGAGTACTCACATTTGTCTCCAAAGGTATGCCTTGATTACTGTGGTTTTGGGCTTTTTTCGTATCTTCAGACAGTGCACTACTGGGAGTCTTCTACATTTAGTTTGTCTGAGATAACTGCAAATTTGAATAATCATGCCCTTTATGGTGGTGCTGAGAAAGGCACTGTGGAACATGATATAAAGACTAGGATTATGGATTATTTGAACATTCCTGAGAATGAGTATGGTCTTGTGTTTACTGTGAGTAGAGGTTCTGCATTTAAATTGTTGGCCGAATCATACCCTTTCCAAACGAACAAAAAATTGTTGACTATGTTTGATTACGAGAGCCAGTCTGTGAATTGGATGGTTCAGAGTGCCAGAGAGAAAGGTGCAAAGGTTTACAGTGCCTGGTTTAAGTGGCCAACCCTCAAACTGTGCTCAACTGATTTGAGAAAGCAAATTACGAACAAAAAGAAGAAGAAGAAGGATGCTGCGACTGGTCTTTTTGTTTTTCCAGTTCAGTCTAGAGTGACCGGGGCCAAGTATTCTTACCAGTGGATGGCATTAGCACAACAGAACAATTGGCATGTCTTGCTTGATGCTGGGTCATTGGGTCCCAAGGACATGGATTCGCTTGGTTTATCCTTGTTCAGGCCTGATTTCATCATCACGTCATTTTACAGGGTCTTTGGGTTTGATCCAACTGGATTTGGCTGCCTTCTGATTAAGAAATCAGTTATTGGATGCCTTCAGAATCAGTCGGGGTCAACTGGGTCTGGAATGGTGAAGATTACCCCCGAATACCCAATGTATCTTAGTGATTCTATAGATGGTCTGGACAAGTTGGGTGGAATTCAAGATGATCATGTAGCTGAAAGTGGTGAGAAACCCTCCGACTCTCGCCATGGATCACAGATGCCTGCTTTCTCTGGAGCATACACGGCTGCTCAGGTGAGGGATGTATTTGAGACTGAGATGGATCAAGATAACAGCTCGGACAGGGATGGAACTAGCACCATATTTGAAGAGACGGAAAGCATCTCAGTAGGGGACATGATGAAGAGTCCTGTGTTCAGTGAAGACGAGTCATCAGACAATTCAATTTGGATCGATTTGGGTCAGAGTCCACTGGGTTCTGACAAATCAGGCCAGATTCACAAACAGAAGATTTCCTCTCCTTTGCCTCCATTTTGGCTTCTTGGGAGGAAGAACCATAAGCAACTTTCCCCGAGACCTACTTCTAATATACATGGCAATCAAATATATGATGACAAAGAGGTAAATTCAGGGGGGAGACGGGTGTCCTTTAGTGTAGAAGATAACTGTAGAGATCATGGAAGCCATAATCTTGAGACAGGAGAGGTATCTGCAGCTAGTCTGGACGACGAAGATTACACCAGTGATGGGGAATATGGTGATGGACAAGACTGGGACAGGAGGGAACCGGAGATCTCATGCCGACATATTGATCATGTTAATATGTTGGGCCTCAATAAAACGACCTCCCGATTGCGATTTTTGATCAACTGGCTTGTGACCTCGTTACTGCAGTTAAGGTTACCTGGTTCAGATGGAGACGGCAGAACAAATTTGGTTCACATCTATGGGCCAAAAATAAAATATGAAAGAGGTGCAGCTGTGGCTTTCAATGTGAGGGACCAAAACAGAGGGTTGATCAATCCTGAAGTTGTTCAGAAGCTGGCTGAAAAAGAAGGTATCGCTCTTGGCATTGGCTTCCTCAATCACATACGAATCATGGATACCTCGAGACAGCATGGGGCTTCGAATCTTCAAGATACTACGCTGTGCAGGCCGATGGAAAAAGGAAGAAAAGGCGGGTTTGTACGGGTTGAGGTTGTAACAGCTTCTTTGGGTTTTCTCACCAACTTTGAGGATGTTTACAAGCTATGGGCTTTTTTGGCCAAGTTTCTAAATCCGGCCTTTGTCAGGGAGGGTGGGCTGTCTACTGTCGAAGAAGAATCTGAGACAAAATCTGAAGCATCTCACGATGAGATTGTTCCGAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00790 map00790

Pfam Domains

Protein Families

No domains found.

Protein Analysis

815

Amino Acids

91.29

Weight (kDa)

5.72

Isoelectric Point (pI)

46.23

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004440)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G23520
fragaria_vesca	FvH4_1g14760
malus_domestica	MD02G1160700.v1.1 MD02G1160800.v1.1 MD15G1274900.v1.1
prunus_persica	Prupe.7G142800_v2.0.a1 Prupe.7G142900_v2.0.a1
pyrus_communis	pycom02g12670 pycom02g12680 pycom02g12690 pycom15g23800
rosa_chinensis	RchiOBHm_Chr2g0103691 RchiOBHm_Chr2g0103701
rosa_laevigata	RLG00000017249 RLG00000017250
rosa_multiflora	Rmu_sc0001852.1_g000009 Rmu_sc0001852.1_g000010
rosa_roxburghii	Rroxscaffold_2G00139470 Rroxscaffold_2G00139480 Rroxscaffold_5G00365360
rosa_rugosa	Rorug02G0116600 Rorug02G0116700
rosa_samantha	Rh2AG165300 Rh2AG165400 Rh2BG172500 Rh2BG172600 Rh2CG171400 Rh2CG171500 Rh2DG170900 Rh2DG171000
rosa_wichuraiana	Rw2G012950 Rw2G012960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	2 cut(s)	211, 976
AccI	GTMKAC	1 cut(s)	2381
AccII	CGCG	2 cut(s)	288, 314
AccIII	TCCGGA	1 cut(s)	111
AciI	CCGC	3 cut(s)	66, 314, 2253
AclWI	GGATC	6 cut(s)	196, 255, 1109, 1333, 1404, 1532
AcoI	YGGCCR	4 cut(s)	250, 705, 836, 2337
AcsI	RAATTY	5 cut(s)	290, 556, 1269, 1699, 2005
AcuI	CTGAAG	5 cut(s)	125, 485, 1151, 2121, 2433
AcyI	GRCGYC	1 cut(s)	342
AfaI	GTAC	3 cut(s)	389, 440, 2262
AfiI	CCNNNNNNNGG	8 cut(s)	211, 241, 270, 406, 976, 1068, 1821, 2364
AgsI	TTSAA	8 cut(s)	99, 562, 640, 1274, 1442, 1518, 2065, 2210
AhdI	GACNNNNNGTC	1 cut(s)	214
AjiI	CACGTC	1 cut(s)	1089
AjnI	CCWGG	3 cut(s)	204, 824, 1978
Alw21I	GWGCWC	2 cut(s)	513, 857
Alw26I	GTCTC	9 cut(s)	456, 1379, 1439, 1642, 1705, 1763, 1986, 2179, 2396
Alw44I	GTGCAC	1 cut(s)	509
AlwI	GGATC	6 cut(s)	196, 255, 1109, 1333, 1404, 1532
AlwNI	CAGNNNCTG	2 cut(s)	825, 2116
Ama87I	CYCGRG	2 cut(s)	1645, 2182
Aor13HI	TCCGGA	1 cut(s)	111
ApaLI	GTGCAC	1 cut(s)	509
ApeKI	GCWGC	8 cut(s)	38, 63, 69, 908, 1131, 1361, 1787, 2051
ApoI	RAATTY	5 cut(s)	290, 556, 1269, 1699, 2005
ArsI	GACNNNNNNTTYG	2 cut(s)	386, 418
Asp700I	GAANNNNTTC	1 cut(s)	2106
AspLEI	GCGC	2 cut(s)	288, 324
AspS9I	GGNCC	7 cut(s)	244, 255, 954, 1031, 1903, 2024, 2074
AsuC2I	CCSGG	1 cut(s)	952
AsuHPI	GGTGA	5 cut(s)	1213, 1310, 1381, 1844, 2290
AsuII	TTCGAA	1 cut(s)	2201
AvaI	CYCGRG	2 cut(s)	1645, 2182
AvaII	GGWCC	3 cut(s)	255, 1031, 2074
BaeGI	GKGCMC	1 cut(s)	513
BalI	TGGCCA	2 cut(s)	838, 2339
BanII	GRGCYC	1 cut(s)	225
BbsI	GAAGAC	4 cut(s)	345, 396, 516, 1503
Bbv12I	GWGCWC	2 cut(s)	513, 857
BbvCI	CCTCAGC	1 cut(s)	425
BbvI	GCAGC	8 cut(s)	25, 75, 81, 895, 1118, 1348, 1799, 2063
BceAI	ACGGC	2 cut(s)	1374, 2011
BciT130I	CCWGG	3 cut(s)	206, 826, 1980
BciVI	GTATCC	1 cut(s)	2170
BclI	TGATCA	4 cut(s)	1279, 1885, 1938, 2091
BcnI	CCSGG	1 cut(s)	952
BcoDI	GTCTC	9 cut(s)	456, 1379, 1439, 1642, 1705, 1763, 1986, 2179, 2396
BfaI	CTAG	5 cut(s)	270, 621, 942, 1428, 1791
BfmI	CTRYAG	4 cut(s)	1242, 1741, 1785, 1964
BfuI	GTATCC	1 cut(s)	2170
BglII	AGATCT	1 cut(s)	1866
BlpI	GCTNAGC	1 cut(s)	318
BmcAI	AGTACT	1 cut(s)	440
Bme1390I	CCNGG	4 cut(s)	206, 826, 952, 1980
Bme18I	GGWCC	3 cut(s)	255, 1031, 2074
BmeRI	GACNNNNNGTC	1 cut(s)	214
BmeT110I	CYCGRG	2 cut(s)	1645, 2182
BmgBI	CACGTC	1 cut(s)	1089
BmgT120I	GGNCC	7 cut(s)	244, 255, 954, 1031, 1903, 2024, 2074
BmiI	GGNNCC	6 cut(s)	275, 955, 1032, 1033, 1860, 2075
BmrFI	CCNGG	4 cut(s)	206, 826, 952, 1980
BmrI	ACTGGG	4 cut(s)	526, 1197, 1556, 1855
BmsI	GCATC	7 cut(s)	185, 895, 1006, 1151, 1323, 1464, 2426
BmuI	ACTGGG	4 cut(s)	526, 1197, 1556, 1855
BoxI	GACNNNNGTC	1 cut(s)	1717
BpiI	GAAGAC	4 cut(s)	345, 396, 516, 1503
BplI	GAGNNNNNCTC	4 cut(s)	425, 457, 1292, 1324
BpmI	CTGGAG	1 cut(s)	1368
Bpu10I	CCTNAGC	3 cut(s)	155, 425, 1365
Bpu1102I	GCTNAGC	1 cut(s)	318
Bpu14I	TTCGAA	1 cut(s)	2201
BpuEI	CTTGAG	3 cut(s)	188, 452, 1787
BpuMI	CCSGG	1 cut(s)	952
Bsa29I	ATCGAT	2 cut(s)	417, 1527
BsaBI	GATNNNNATC	1 cut(s)	99
BsaHI	GRCGYC	1 cut(s)	342
BsaI	GGTCTC	1 cut(s)	1642
BsaJI	CCNNGG	6 cut(s)	204, 226, 247, 951, 1035, 1321
BsaWI	WCCGGW	2 cut(s)	111, 1861
Bsc4I	CCNNNNNNNGG	8 cut(s)	211, 241, 270, 406, 976, 1068, 1821, 2364
Bse118I	RCCGGY	1 cut(s)	252
Bse8I	GATNNNNATC	1 cut(s)	99
BseAI	TCCGGA	1 cut(s)	111
BseBI	CCWGG	3 cut(s)	206, 826, 1980
BseCI	ATCGAT	2 cut(s)	417, 1527
BseDI	CCNNGG	6 cut(s)	204, 226, 247, 951, 1035, 1321
BseJI	GATNNNNATC	1 cut(s)	99
BseLI	CCNNNNNNNGG	8 cut(s)	211, 241, 270, 406, 976, 1068, 1821, 2364
BseRI	GAGGAG	2 cut(s)	254, 449
BseSI	GKGCMC	1 cut(s)	513
BseXI	GCAGC	8 cut(s)	25, 75, 81, 895, 1118, 1348, 1799, 2063
BseYI	CCCAGC	2 cut(s)	282, 1019
BsgI	GTGCAG	3 cut(s)	291, 2070, 2245
Bsh1236I	CGCG	2 cut(s)	288, 314
BshVI	ATCGAT	2 cut(s)	417, 1527
BsiHKAI	GWGCWC	2 cut(s)	513, 857
BsiHKCI	CYCGRG	2 cut(s)	1645, 2182
BsiSI	CCGG	5 cut(s)	112, 253, 951, 1862, 2354
BslFI	GGGAC	4 cut(s)	1017, 1481, 1862, 2087
BslI	CCNNNNNNNGG	8 cut(s)	211, 241, 270, 406, 976, 1068, 1821, 2364
BsmAI	GTCTC	9 cut(s)	456, 1379, 1439, 1642, 1705, 1763, 1986, 2179, 2396
BsmBI	CGTCTC	3 cut(s)	1439, 1705, 1986
BsmFI	GGGAC	4 cut(s)	1017, 1481, 1862, 2087
Bso31I	GGTCTC	1 cut(s)	1642
BsoBI	CYCGRG	2 cut(s)	1645, 2182
Bsp119I	TTCGAA	1 cut(s)	2201
Bsp1286I	GDGCHC	3 cut(s)	225, 513, 857
Bsp13I	TCCGGA	1 cut(s)	111
Bsp1720I	GCTNAGC	1 cut(s)	318
Bsp19I	CCATGG	1 cut(s)	1321
BspACI	CCGC	3 cut(s)	66, 314, 2253
BspDI	ATCGAT	2 cut(s)	417, 1527
BspEI	TCCGGA	1 cut(s)	111
BspFNI	CGCG	2 cut(s)	288, 314
BspLI	GGNNCC	6 cut(s)	275, 955, 1032, 1033, 1860, 2075
BspMAI	CTGCAG	2 cut(s)	1789, 1968
BspPI	GGATC	6 cut(s)	196, 255, 1109, 1333, 1404, 1532
BspQI	GCTCTTC	1 cut(s)	53
BspT104I	TTCGAA	1 cut(s)	2201
BspTNI	GGTCTC	1 cut(s)	1642
BsrFI	RCCGGY	1 cut(s)	252
BssAI	RCCGGY	1 cut(s)	252
BssECI	CCNNGG	6 cut(s)	204, 226, 247, 951, 1035, 1321
BssNI	GRCGYC	1 cut(s)	342
BssT1I	CCWWGG	4 cut(s)	226, 247, 1035, 1321
Bst2UI	CCWGG	3 cut(s)	206, 826, 1980
Bst4CI	ACNGT	8 cut(s)	476, 508, 601, 676, 821, 852, 1742, 2386
Bst6I	CTCTTC	3 cut(s)	53, 1437, 1472
BstACI	GRCGYC	1 cut(s)	342
BstAPI	GCANNNNNTGC	1 cut(s)	1009
BstBI	TTCGAA	1 cut(s)	2201
BstC8I	GCNNGC	3 cut(s)	1338, 2118, 2228
BstDSI	CCRYGG	1 cut(s)	1321
BstEII	GGTNACC	1 cut(s)	1974
BstENI	CCTNNNNNAGG	2 cut(s)	1066, 2362
BstFNI	CGCG	2 cut(s)	288, 314
BstHHI	GCGC	2 cut(s)	288, 324
BstMAI	GTCTC	9 cut(s)	456, 1379, 1439, 1642, 1705, 1763, 1986, 2179, 2396
BstMWI	GCNNNNNNNGC	7 cut(s)	69, 314, 1009, 1358, 2057, 2227, 2336
BstNI	CCWGG	3 cut(s)	206, 826, 1980
BstNSI	RCATGY	1 cut(s)	1007
BstPAI	GACNNNNGTC	1 cut(s)	1717
BstPI	GGTNACC	1 cut(s)	1974
BstSCI	CCNGG	4 cut(s)	204, 824, 950, 1978
BstSFI	CTRYAG	4 cut(s)	1242, 1741, 1785, 1964
BstSLI	GKGCMC	1 cut(s)	513
BstUI	CGCG	2 cut(s)	288, 314
BstV1I	GCAGC	8 cut(s)	25, 75, 81, 895, 1118, 1348, 1799, 2063
BstV2I	GAAGAC	4 cut(s)	345, 396, 516, 1503
BstX2I	RGATCY	2 cut(s)	260, 1866
BstXI	CCANNNNNNTGG	1 cut(s)	1042
BstYI	RGATCY	2 cut(s)	260, 1866
Bsu15I	ATCGAT	2 cut(s)	417, 1527
BsuI	GTATCC	1 cut(s)	2170
BsuTUI	ATCGAT	2 cut(s)	417, 1527
BtgI	CCRYGG	1 cut(s)	1321
BtrI	CACGTC	1 cut(s)	1089
BtsI	GCAGTG	1 cut(s)	303
BtsIMutI	CAGTG	9 cut(s)	38, 303, 513, 597, 826, 977, 1498, 1544, 1822
Cac8I	GCNNGC	3 cut(s)	1338, 2118, 2228
CaiI	CAGNNNCTG	2 cut(s)	825, 2116
CfoI	GCGC	2 cut(s)	288, 324
Cfr10I	RCCGGY	1 cut(s)	252
Cfr13I	GGNCC	7 cut(s)	244, 255, 954, 1031, 1903, 2024, 2074
ClaI	ATCGAT	2 cut(s)	417, 1527
CseI	GACGC	1 cut(s)	350
CsiI	ACCWGGT	1 cut(s)	1978
Csp6I	GTAC	3 cut(s)	388, 439, 2261
CspCI	CAANNNNNGTGG	2 cut(s)	1246, 1281
CviQI	GTAC	3 cut(s)	388, 439, 2261
DraI	TTTAAA	1 cut(s)	697
DriI	GACNNNNNGTC	1 cut(s)	214
EaeI	YGGCCR	4 cut(s)	250, 705, 836, 2337
Eam1104I	CTCTTC	3 cut(s)	53, 1437, 1472
Eam1105I	GACNNNNNGTC	1 cut(s)	214
EarI	CTCTTC	3 cut(s)	53, 1437, 1472
Eco130I	CCWWGG	4 cut(s)	226, 247, 1035, 1321
Eco147I	AGGCCT	1 cut(s)	1072
Eco24I	GRGCYC	1 cut(s)	225
Eco31I	GGTCTC	1 cut(s)	1642
Eco47I	GGWCC	3 cut(s)	255, 1031, 2074
Eco57I	CTGAAG	5 cut(s)	125, 485, 1151, 2121, 2433
Eco88I	CYCGRG	2 cut(s)	1645, 2182
Eco91I	GGTNACC	1 cut(s)	1974
EcoNI	CCTNNNNNAGG	2 cut(s)	1066, 2362
EcoO109I	RGGNCCY	2 cut(s)	244, 1031
EcoO65I	GGTNACC	1 cut(s)	1974
EcoRI	GAATTC	2 cut(s)	290, 1269
EcoRII	CCWGG	3 cut(s)	204, 824, 1978
EcoT14I	CCWWGG	4 cut(s)	226, 247, 1035, 1321
EcoT22I	ATGCAT	1 cut(s)	6
EcoT38I	GRGCYC	1 cut(s)	225
ErhI	CCWWGG	4 cut(s)	226, 247, 1035, 1321
Esp3I	CGTCTC	3 cut(s)	1439, 1705, 1986
FaqI	GGGAC	4 cut(s)	1017, 1481, 1862, 2087
FauI	CCCGC	1 cut(s)	2246
FbaI	TGATCA	4 cut(s)	1279, 1885, 1938, 2091
FblI	GTMKAC	1 cut(s)	2381
FriOI	GRGCYC	1 cut(s)	225
FspBI	CTAG	5 cut(s)	270, 621, 942, 1428, 1791
GlaI	GCGC	2 cut(s)	287, 323
GsaI	CCCAGC	2 cut(s)	286, 1023
GsuI	CTGGAG	1 cut(s)	1368
HapII	CCGG	5 cut(s)	112, 253, 951, 1862, 2354
HgaI	GACGC	1 cut(s)	350
HhaI	GCGC	2 cut(s)	288, 324
Hin1I	GRCGYC	1 cut(s)	342
Hin6I	GCGC	2 cut(s)	286, 322
HinP1I	GCGC	2 cut(s)	286, 322
HincII	GTYRAC	2 cut(s)	744, 1185
HindII	GTYRAC	2 cut(s)	744, 1185
HindIII	AAGCTT	1 cut(s)	152
HpaII	CCGG	5 cut(s)	112, 253, 951, 1862, 2354
HphI	GGTGA	5 cut(s)	1213, 1310, 1381, 1844, 2290
Hpy166II	GTNNAC	9 cut(s)	511, 672, 744, 817, 1185, 1544, 2014, 2317, 2382
Hpy8I	GTNNAC	9 cut(s)	511, 672, 744, 817, 1185, 1544, 2014, 2317, 2382
Hpy99I	CGWCG	1 cut(s)	1805
HpyAV	CCTTC	4 cut(s)	895, 1145, 1175, 2123
HpyCH4III	ACNGT	8 cut(s)	476, 508, 601, 676, 821, 852, 1742, 2386
HpyCH4IV	ACGT	1 cut(s)	1088
HpyF10VI	GCNNNNNNNGC	7 cut(s)	69, 314, 1009, 1358, 2057, 2227, 2336
HpySE526I	ACGT	1 cut(s)	1088
Hsp92I	GRCGYC	1 cut(s)	342
HspAI	GCGC	2 cut(s)	286, 322
KflI	GGGWCCC	1 cut(s)	1031
Kpn2I	TCCGGA	1 cut(s)	111
Ksp22I	TGATCA	4 cut(s)	1279, 1885, 1938, 2091
LguI	GCTCTTC	1 cut(s)	53
LmnI	GCTCC	2 cut(s)	279, 1349
Lsp1109I	GCAGC	8 cut(s)	25, 75, 81, 895, 1118, 1348, 1799, 2063
LweI	GCATC	7 cut(s)	185, 895, 1006, 1151, 1323, 1464, 2426
MabI	ACCWGGT	1 cut(s)	1978
MaeI	CTAG	5 cut(s)	270, 621, 942, 1428, 1791
MaeII	ACGT	1 cut(s)	1088
MaeIII	GTNAC	5 cut(s)	946, 1951, 1959, 1974, 2275
MfeI	CAATTG	1 cut(s)	997
MflI	RGATCY	2 cut(s)	260, 1866
MhlI	GDGCHC	3 cut(s)	225, 513, 857
MlsI	TGGCCA	2 cut(s)	838, 2339
MluNI	TGGCCA	2 cut(s)	838, 2339
MlyI	GAGTC	7 cut(s)	224, 341, 530, 1307, 1489, 1511, 1549
MmeI	TCCRAC	2 cut(s)	1142, 1335
Mox20I	TGGCCA	2 cut(s)	838, 2339
Mph1103I	ATGCAT	1 cut(s)	6
MroI	TCCGGA	1 cut(s)	111
MroXI	GAANNNNTTC	1 cut(s)	2106
MscI	TGGCCA	2 cut(s)	838, 2339
MseI	TTAA	6 cut(s)	198, 696, 831, 1143, 1893, 1970
MslI	CAYNNNNRTG	1 cut(s)	2019
Msp20I	TGGCCA	2 cut(s)	838, 2339
MspA1I	CMGCKG	3 cut(s)	66, 424, 2054
MspI	CCGG	5 cut(s)	112, 253, 951, 1862, 2354
MspR9I	CCNGG	4 cut(s)	206, 826, 952, 1980
MunI	CAATTG	1 cut(s)	997
MvaI	CCWGG	3 cut(s)	206, 826, 1980
MvnI	CGCG	2 cut(s)	288, 314
MwoI	GCNNNNNNNGC	7 cut(s)	69, 314, 1009, 1358, 2057, 2227, 2336
NciI	CCSGG	1 cut(s)	952
NcoI	CCATGG	1 cut(s)	1321
NlaIV	GGNNCC	6 cut(s)	275, 955, 1032, 1033, 1860, 2075
NmuCI	GTSAC	2 cut(s)	946, 1951
NsiI	ATGCAT	1 cut(s)	6
NspI	RCATGY	1 cut(s)	1007
NspV	TTCGAA	1 cut(s)	2201
PaeR7I	CTCGAG	1 cut(s)	2182
PceI	AGGCCT	1 cut(s)	1072
PciSI	GCTCTTC	1 cut(s)	53
PdmI	GAANNNNTTC	1 cut(s)	2106
PfeI	GAWTC	9 cut(s)	95, 710, 1046, 1171, 1238, 1570, 2169, 2203, 2396
PflMI	CCANNNNNTGG	2 cut(s)	211, 976
PleI	GAGTC	7 cut(s)	223, 340, 529, 1307, 1488, 1510, 1548
PpsI	GAGTC	7 cut(s)	223, 340, 529, 1307, 1488, 1510, 1548
PpuMI	RGGWCCY	1 cut(s)	1031
PshAI	GACNNNNGTC	1 cut(s)	1717
Psp5II	RGGWCCY	1 cut(s)	1031
Psp6I	CCWGG	3 cut(s)	204, 824, 1978
PspEI	GGTNACC	1 cut(s)	1974
PspFI	CCCAGC	2 cut(s)	282, 1019
PspGI	CCWGG	3 cut(s)	204, 824, 1978
PspN4I	GGNNCC	6 cut(s)	275, 955, 1032, 1033, 1860, 2075
PspPI	GGNCC	7 cut(s)	244, 255, 954, 1031, 1903, 2024, 2074
PspPPI	RGGWCCY	1 cut(s)	1031
PstI	CTGCAG	2 cut(s)	1789, 1968
PstNI	CAGNNNCTG	2 cut(s)	825, 2116
PsuI	RGATCY	2 cut(s)	260, 1866
PvuII	CAGCTG	2 cut(s)	424, 2054
RsaI	GTAC	3 cut(s)	389, 440, 2262
RsaNI	GTAC	3 cut(s)	388, 439, 2261
RseI	CAYNNNNRTG	1 cut(s)	2019
SapI	GCTCTTC	1 cut(s)	53
SaqAI	TTAA	6 cut(s)	198, 696, 831, 1143, 1893, 1970
Sau96I	GGNCC	7 cut(s)	244, 255, 954, 1031, 1903, 2024, 2074
ScaI	AGTACT	1 cut(s)	440
SchI	GAGTC	7 cut(s)	224, 341, 530, 1307, 1489, 1511, 1549
ScrFI	CCNGG	4 cut(s)	206, 826, 952, 1980
SduI	GDGCHC	3 cut(s)	225, 513, 857
SexAI	ACCWGGT	1 cut(s)	1978
SfaNI	GCATC	7 cut(s)	185, 895, 1006, 1151, 1323, 1464, 2426
SfcI	CTRYAG	4 cut(s)	1242, 1741, 1785, 1964
Sfr274I	CTCGAG	1 cut(s)	2182
SfuI	TTCGAA	1 cut(s)	2201
SinI	GGWCC	3 cut(s)	255, 1031, 2074
SlaI	CTCGAG	1 cut(s)	2182
SmiI	ATTTAAAT	1 cut(s)	697
SmiMI	CAYNNNNRTG	1 cut(s)	2019
SmlI	CTYRAG	4 cut(s)	167, 431, 1766, 2182
SmoI	CTYRAG	4 cut(s)	167, 431, 1766, 2182
SseBI	AGGCCT	1 cut(s)	1072
SsiI	CCGC	3 cut(s)	66, 314, 2253
SspMI	CTAG	5 cut(s)	270, 621, 942, 1428, 1791
StuI	AGGCCT	1 cut(s)	1072
StyD4I	CCNGG	4 cut(s)	204, 824, 950, 1978
StyI	CCWWGG	4 cut(s)	226, 247, 1035, 1321
SwaI	ATTTAAAT	1 cut(s)	697
TaaI	ACNGT	8 cut(s)	476, 508, 601, 676, 821, 852, 1742, 2386
TaiI	ACGT	1 cut(s)	1091
TaqI	TCGA	7 cut(s)	330, 371, 417, 1527, 2183, 2201, 2388
TatI	WGTACW	1 cut(s)	438
TauI	GCSGC	2 cut(s)	69, 317
TfiI	GAWTC	9 cut(s)	95, 710, 1046, 1171, 1238, 1570, 2169, 2203, 2396
Tru1I	TTAA	6 cut(s)	198, 696, 831, 1143, 1893, 1970
Tru9I	TTAA	6 cut(s)	198, 696, 831, 1143, 1893, 1970
TscAI	CASTG	9 cut(s)	38, 310, 513, 604, 826, 977, 1498, 1551, 1822
TseFI	GTSAC	2 cut(s)	946, 1951
TseI	GCWGC	8 cut(s)	38, 63, 69, 908, 1131, 1361, 1787, 2051
Tsp45I	GTSAC	2 cut(s)	946, 1951
TspDTI	ATGAA	3 cut(s)	1069, 1490, 2055
TspGWI	ACGGA	4 cut(s)	91, 287, 347, 1463
TspRI	CASTG	9 cut(s)	38, 310, 513, 604, 826, 977, 1498, 1551, 1822
Van91I	CCANNNNNTGG	2 cut(s)	211, 976
VneI	GTGCAC	1 cut(s)	509
VpaK11BI	GGWCC	3 cut(s)	255, 1031, 2074
XagI	CCTNNNNNAGG	2 cut(s)	1066, 2362
XapI	RAATTY	5 cut(s)	290, 556, 1269, 1699, 2005
XbaI	TCTAGA	1 cut(s)	941
XceI	RCATGY	1 cut(s)	1007
XhoI	CTCGAG	1 cut(s)	2182
XmiI	GTMKAC	1 cut(s)	2381
XmnI	GAANNNNTTC	1 cut(s)	2106
XspI	CTAG	5 cut(s)	270, 621, 942, 1428, 1791
ZrmI	AGTACT	1 cut(s)	440
Zsp2I	ATGCAT	1 cut(s)	6

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.